mRNA_14617 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351515
Unique NamemRNA_14617
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Match: A0A836C876_9STRA (Scd6-like Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C876_9STRA)

HSP 1 Score: 630 bits (1626), Expect = 6.970e-225
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 3
Query:  153 MSSQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGPQVPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKPAQPMVAPPPGALGPPPVPAQEQQQRADTGKLEGGGKPAKYQPPHKKPNFKPKGEGGKRGGDSAPPGPSGPHAIPGKTVGTGDHLMARPNRGGGGIAVESEEFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALDGRHRVPGFTERKLNTETFGATGVNTGNRQDRVLNLVIKEQHLLARYQGRGRGGYRGGYRSYNQRSGSGTQGTST 1133
            MSSQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGPQVPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKPAQPMVAPPPGALGPPPVPAQEQQQRADTGKLEGGGKPAKYQPPHKKPNFKPKGEGGKRGGDSAPPGPSGPHAIPGKTVGTGDHLMARPNRGGGGIAVESEEFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALDGRHRVPGFTERKLNTETFGATGVNTGNRQDRVLNLVIKEQHLLARYQGRGRGGYRGGYRSYNQRSGSGTQGTST
Sbjct:    1 MSSQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGPQVPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKPAQPMVAPPPGALGPPPVPAQEQQQRADTGKLEGGGKPAKYQPPHKKPNFKPKGEGGKRGGDSAPPGPSGPHAIPGKTVGTGDHLMARPNRGGGGIAVESEEFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALDGRHRVPGFTERKLNTETFGATGVNTGNRQDRVLNLVIKEQHLLARYQGRGRGGYRGGYRSYNQRSGSGTQGTST 327          
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Match: D7FK17_ECTSI (Novel Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK17_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 1.840e-42
Identity = 132/327 (40.37%), Postives = 162/327 (49.54%), Query Frame = 3
Query:  159 SQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGPQ-VPASDEIFGCIVFRGQDIKDLHVHDTP-AEAPKPAQPM----------------VAPPPGALGPPPVPAQEQQQRADTGKLEG------------GGKPAKYQPPHKKPNFKPKGEGGKRGGDSAPP----GPSGPH--------AIPGKTVGTGDHLM-ARPNRGGGGIAVESEEFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALDGRHRVPGFT--ERKLNTETFGATGV--NTGNRQ 998
            S  L+GSRISLIS+KDIR+EGIL  +D EN+SVTLQ+VKSWGTE R+EG Q +P SD +  C+ FRG+DIKDLHVH+T  A AP PA P+                VAP   A G     A   +  A+ G +E             G KP +YQPPHK PN+KP            PP    GP G          A+PG+    G+HL+  R              FDF+A L++FDK+                                       KSSFFDEISCDALDGR  +PG    ER  NTETFGAT V  + G+R+
Sbjct:    2 SGDLVGSRISLISRKDIRWEGILVQVDRENASVTLQNVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPPPAAPVQXXXXXXXXXXXVATRVAPDVAAGGG----AGGVRAAAENGDVEAEDAPGSSTMRDQGLKPGRYQPPHKNPNWKP------------PPTVQRGPPGXXXXXXXXXXALPGQ----GNHLLNRRTXXXXXXXXXXXXXFDFEAGLAKFDKE---------------------------------------KSSFFDEISCDALDGRGHMPGGRGGERTRNTETFGATSVALSAGSRR 269          
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Match: A0A6H5KDD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD7_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 5.640e-36
Identity = 139/395 (35.19%), Postives = 171/395 (43.29%), Query Frame = 3
Query:  159 SQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGPQ-VPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKP----------------------AQPMVAPPPGALGPPPVPAQEQQQRADTGK-----LEGGGKPAKYQPPHKKPNFKPKGEGGKRGGDSAPPGPSGPHAIPGKTV-GTGDHLM-ARPNRGGGGIAVESEEFDFQAALSQFDKDAERTEI-------------------------------------------YGVGTAADAAGGL--------------------------------------DGGEALALXXXXXXXPKKYNKSSFFDEISCDALDGRHRVPGFT--ERKLNTETFGATGV--NTGNRQ 998
            S  L+GSRISLIS+KDIR+EGIL  +D EN+SVTLQ+VKSWGTE R+EG Q +P SD +  C+ FRG+DIKDLHVH+T AEAP P                        P VA   G  G     A+     A+         + G KP +YQPPHK PN+KP     +RG    PPG           + G G+HL+  R                 +A L++FDK+ E   +                                            GVG   DA GG                                       DGG  + +        KKYNKSSFFDEISCDALDGR  +PG    ER  NTETFGAT V  + G+R+
Sbjct:    2 SGDLVGSRISLISRKDIRWEGILVQVDRENASVTLQNVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHET-AEAPTPPPAAXXXXXXXXXXXXXXXXTRVAPDVAAGGGGAGGVRAAAENGDVEAEDSPGSPTMRDQGLKPGRYQPPHKNPNWKPP-PTVQRG----PPGXXXXXXXXXXXLPGQGNHLLNRRTXXXXXXXXXXXXXXXXEAGLAKFDKEKEMALLAGSLSTASIHDSIINNYNPAAAANGRDANGGDAHGSSLGEGGTMGVGDGEDADGGXXXRXXXXGVDATSXXXXXXXXXXXXXXXXXXXDTRSAADGGGEVWVEPPVVV--KKYNKSSFFDEISCDALDGRGHMPGGRGGERMRNTETFGATSVALSAGSRR 388          
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Match: B7FYW7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYW7_PHATC)

HSP 1 Score: 140 bits (354), Expect = 1.360e-34
Identity = 117/311 (37.62%), Postives = 153/311 (49.20%), Query Frame = 3
Query:  153 MSSQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGPQ----VPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKPAQPMVAPP--PGALGPPPVPAQEQ--QQRADTGKLEGGGK-----PAKYQPPHKKPNFKPKGEGGKRGGDSAPPGPSGPHAIPGKTVGTGDHLMARPNRG----GGGIAVESEEFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALDGR----HRVPGFTERKLNTETFGATGVNTGNRQDRVLNLVI 1022
            M+   LIG  ISLISKK+IRYEG+LY I+ +N++V LQ+V+S+GTE R    Q    V  SD++   ++FRGQDIKDLHVH+  AEA  PA P   P   P    P P P         A T K E   +     P K        N +P+G+ G               A PG    TG  L+ R  RG    G  +    ++FDFQ+ L QF K+ E  +        +AA  LD G            P  Y K  FFD ISCDA+D +    +R+ G  ER LNTETFGA  ++  NR    L+ ++
Sbjct:    1 MAQNPLIGKNISLISKKNIRYEGVLYSINEQNATVALQNVRSFGTEGREATEQWLAFVGPSDDVHPFLMFRGQDIKDLHVHEAGAEAVTPAPPPPEPTSKPAVQAPIPAPTHSXVXXXXAATTKPEAAPQNSATIPQKSMERGHNDNRRPRGKSG---------------AAPG----TGASLLNRKARGVVTEGDAVQPPRDDFDFQSNLEQFKKEDEEAD--------EAAETLDRG------------PSAYAKDDFFDSISCDAIDKQSGVNNRLRGAEERSLNTETFGAVALD--NRSSLKLDAML 270          
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Match: D8LRU5_ECTSI (Novel Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU5_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 5.100e-31
Identity = 137/407 (33.66%), Postives = 172/407 (42.26%), Query Frame = 3
Query:  144 GSGMSSQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGPQVPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKPAQPMVAPPPGAL---------------------------------------------------GPP------------------PVP--------------------------AQEQQQRADTGKLEGGGKPAKYQPPH-KKPNFKPKGE--------------GGKRGGDSAPPGPSGPHAIPGKTVGTGDHLMARPNRGG------GGIAVES-EEFDFQAALSQFDKDAERT-EIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALD---GRH-RVPGFTERKLNTETFGATGVNTGNRQ 998
            GSG+    L+GSRISLISKK+IRYEG LY I+  ++S+ LQ+V+S+GTE RVEG  +P S  +   + FRGQDI DLHVHD  AEA + +Q    PPP A                                                    GPP                  PVP                          AQ+ Q+RA TG+      P   Q  H  +P   P+G               G  RG        S P   PG  VGTG+ L+    RGG      G  +V + +EFDFQ+ L +FDK+ E   E+ G+   A  +    GG   A         KKYNKSSFFDEISCD LD   GR  RV    E  +N +TFG TG+    R+
Sbjct:    5 GSGVP---LVGSRISLISKKNIRYEGTLYNINTSDASLALQNVRSFGTEGRVEGHVIPPSQVLHDFVCFRGQDIMDLHVHD--AEADEGSQAAPPPPPTAPVQFAQPPQPTGXXXXXXXXXLLSPAFVSLLMMRSCGQGNPDVRRATNGPQNGPPARQQATQAGQRQPAPSARPVPVARGAQQRRAAPASSSPRVAQAAGQAAQQNQRRAPTGQRP---PPRSQQHQHPSQPTGAPRGRRNGTPRSRQLINGGGAGRGAAGGTSATSAPARTPGAMVGTGEALLNIRARGGPATDGKGAASVPTAQEFDFQSELQKFDKEKELAKEMGGLSVEASNSTASSGGAGGATDSV-----KKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRR 398          
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Match: A0A7S2JUH1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUH1_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.120e-27
Identity = 109/312 (34.94%), Postives = 149/312 (47.76%), Query Frame = 3
Query:  153 MSSQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVE-----GPQVPASDEIFGCIVFRGQDIKDLHVHDTPAEAPK----PAQPMVAPPPGALGPPPVPAQEQQQRADTGKLEGGGKPAKYQPPHKKPNFKPKGEGGK-------RGGDSAPPGPSGPHAIP--------------GKTVGTGDHLMARPNRG--GGGIAVESEEFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALD---GRH-RVPGFTERKLNTETFGATGV 980
            M++  L+GSRISLISKKDIRYEG LY I+  +++V LQ+V+S+GTE R +     G  +P    +   ++FRG DIKDLHVH+  ++A K    P+ P +     A  PP V A +Q     T   +    P       K+P+ KP+ +  K           S+  G   P                   + VGTG  L+ R   G   G      E+FD ++A ++FDKDAE  +I G           +  E +            Y K  FFDEISCD  D   G H R+ G  ERK+NTETFGA  +
Sbjct:    1 MANNPLLGSRISLISKKDIRYEGTLYSINETDATVALQNVRSFGTEGREKRDDAAGTFIPPQATVHPYLLFRGMDIKDLHVHEKASDAAKKEDVPSDPAIL---SATAPPEV-ANKQASADSTAAKKKVDTPGNDDVFDKEPDTKPEKKTTKTLTKADSNASXSSAKGQREPSQXXXXXXXXXXXXXXXKNELVGTGASLLNRKVLGTVDGEAPKVGEDFDLESATAKFDKDAEYEQING-----------ENPEPIE---------SSYKKDDFFDEISCDVTDKMNGVHTRLRGAEERKVNTETFGAVSL 288          
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Match: A0A1V9Z4Q3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z4Q3_9STRA)

HSP 1 Score: 116 bits (291), Expect = 5.220e-25
Identity = 112/324 (34.57%), Postives = 142/324 (43.83%), Query Frame = 3
Query:  171 IGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGPQVPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKPAQPM-------------------------------VAPP------PGALG------PPPVPAQEQQQRADTGKLEGGGKPAKYQPPHKKPNFKPKGEGGKRGGDSAPPGPSGPHAIPGKTV-GTGDHLMARPNR--GGGGIAVESE---EFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALDGRHRVPG----FTERKLNTETFGATGVN 983
            IGSRISLISK DIRYEG+L+ ID   S V LQ+V+S+GTE R     +P SD +     F+  +IKDLHV +  A  P P  PM                                AP       PGA+       P P+P Q+Q   +   +L      A  +P   + N  P           +P  P    A   +T+ G G HL+ R  R  GG     ESE   +FDF   L  F+K+ E  ++            +D  +A+            Y KSSFFD ISCDALD    V G      ERKLNTETFGA G+N
Sbjct:   12 IGSRISLISKTDIRYEGLLFNIDTRQSMVALQNVRSFGTEGR-RPDHIPPSDTVLQYATFKASEIKDLHVCEAAAPMPPPP-PMQYQXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPASSTLLTPGAMSNAQQAVPKPLPVQQQSPASAVPEL------ANVEPKQVQVNSTP-----------SPRQPIRHEAESHRTIPGMGGHLLKRKERRIGGDTSMTESELAADFDFSVGLHDFNKEQEYNKMS-----------MDNADAVRPVLKG-----SYQKSSFFDTISCDALDRLEGVNGRMRAHEERKLNTETFGAVGLN 300          
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Match: A0A7S2DIJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIJ2_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.740e-25
Identity = 124/375 (33.07%), Postives = 159/375 (42.40%), Query Frame = 3
Query:  168 LIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGPQVPASDEIFGCIVFRGQDIKDLHVHD---TPAEAP-------KPAQPMVAPPPG----------ALGPP---------------------------------------------------------PVPAQE--QQQRADTG---KLEGGGKPAK---YQPPHKKPNFKPKGEGGK---RGGDSAPPGPSGPHAIPGKTVGTGDHLMARPNRG-----GGGIAVE-SEEFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKS-SFFDEISCDALD-GRHRVPGFT---ERKLNTETFGATGVNTGNR 995
            LIGSRISLISKKDIRY G LY I+   ++V LQDV+S+GTE+R     VP +D I+  I FRG DI DLH+HD   T  E P       KP  P   P P           A+ PP                                                         P+ +Q      +A+ G   +LE GG+       +PP+K     P+G  G+   R   S P  P    +  G   GTG  L+ R  +G        ++ E SE+FDF +A   FDK  E  ++   G++  A G                  KKYN S SFFDE+SCDALD G  R    T   E+K N+ETFGA G+    R
Sbjct:   10 LIGSRISLISKKDIRYVGFLYDINTSEATVALQDVRSFGTEHRPVPQFVPPADTIYPFIKFRGSDINDLHIHDSQPTDGEGPLQQLMGGKPQPPQQEPAPALLTGLGGFPTAISPPGVLSTASLAPGPLLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSASFGSFAATVAPITSQTLTHTAKAENGGAAQLEVGGRSGTDSIRRPPNKGRGGAPQGSSGRNAPRMQSSNPKVPGASGSRSGAMPGTGASLLTRKPKGLDKEHRNALSAEMSEDFDFSSAAEDFDKKKEAEKLAARGSSITAEGDSS---------------KKYNPSASFFDELSCDALDRGGKRFDSQTRLDEQKKNSETFGAVGLQDNRR 369          
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Match: A0A662XUA1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUA1_9STRA)

HSP 1 Score: 116 bits (290), Expect = 9.490e-25
Identity = 112/342 (32.75%), Postives = 140/342 (40.94%), Query Frame = 3
Query:  171 IGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGPQVPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKPA--QPMVA-------PPPGALGP-----------------PPVPAQEQQQRADTGKLEGGGKPAKYQPP--------------------------------HKKPNFKPKGEGGKRGGDSAPPGPSGPHAIPGKTVGTGDHLMARPNR---------GGGGIAVESEEFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALDG----RHRVPGFTERKLNTETFGATGVN 983
            IGSRISLISK DIRYEG L+ ID   S V LQ V+S+GTE R     VP S ++     F+  +I+DLHV +     P+PA  QP          PPP   GP                 P  P         + ++     P + QPP                                +  PN +   +GG + G +A    +G   IPG     G HL+ R  R         GG G A  S EF+F   L+ FDK  E +++                               Y KSSFFD ISCDALD     R R+ G  ERKLNTETFGA G+N
Sbjct:   28 IGSRISLISKTDIRYEGFLFNIDTRQSMVALQSVRSFGTEGR-RAEHVPPSPQVLQYATFKASEIQDLHVCEAAPPPPQPAASQPQPQSYAQPSYPPPMPSGPXXXXXXXXXXXXXXXXAPSKPTLLTPGSVSSAQMHQTPSPRQAQPPVAMYSQQPMQPSYDQHQXXXXXXXQSAPRASYNSNPNRR---QGGSQSGQAAN---NGMRTIPGM----GGHLLKRKERRVPGGNAEVGGVGPAAASGEFNFAEGLNDFDKQEEFSKLD--------------------EEVKPETKGSYQKSSFFDTISCDALDRLEGQRSRITGAEERKLNTETFGAVGLN 338          
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Match: A0A1Y1YN51_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YN51_9FUNG)

HSP 1 Score: 115 bits (288), Expect = 1.080e-24
Identity = 122/371 (32.88%), Postives = 166/371 (44.74%), Query Frame = 3
Query:  153 MSSQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVEGP--QVPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKPAQPMVAPPPGAL---GPPPVPAQEQQQRADTGK-LEGGGKPAKYQP--PHKKPNFKPKGEGGKRGGDSAPPGPSGPHAIPG--------KTVGTGDHLMARPNRGGGG----------IAVESEEFDFQAALSQFDKDAERTEIYGVGTAADAAGGLDGGEALALXXXXXXXPKKYNKS-SFFDEISCDAL------DGRHRVPGFTERK--------LNTETFGATGVNTGNRQDRVLNLVIKEQHLLARYQGRGRGGY------------RGGYRSYNQRS 1106
            MS++  IGS ISLIS+ DIRY GIL+ I+ + S++ L+ V+S+GTE R   P  ++ ASD +F  IVFRG D+KDL+V + P   P P  P V   P  L    PP  P  +     D  +  E GG   + QP  P++   +       ++ G  A   P    +  G        +  G G HL     RG G           I + S +FDF+++ ++FDK     EI             +  E           P  YNKS SFFD ISC+A       DGR R+  F ER+        LN ETFG T V++                  +RY+GRGRGG+            RGGY   N R+
Sbjct:    1 MSAEGFIGSTISLISRSDIRYVGILHSINAQESTIALEKVRSFGTEGRKGNPAEEIAASDHVFEYIVFRGSDVKDLNVCEAP---PAPQPPAVPNDPAILQTTAPPQPPGFQNYGNNDVNRPKETGGSFGQPQPAYPNRAQQY------WQQPGHDASAEPQSKESAGGIEQNGASDRLPGMGGHLTHNNRRGRGNRRHNGRDRNNIPIPSSDFDFESSNAKFDKTELLKEI-------------EDDEVPEQPVEPSTQPF-YNKSTSFFDNISCEAKERMDNNDGRPRL-SFNERRERQHHERQLNLETFGQTSVDS------------------SRYRGRGRGGHXXXXXXXXXRXXRGGYNHNNYRN 329          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351515 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C876_9STRA6.970e-225100.00Scd6-like Sm domain-containing protein n=1 Tax=Tri... [more]
D7FK17_ECTSI1.840e-4240.37Novel Sm-like protein with long N-and C-terminal d... [more]
A0A6H5KDD7_9PHAE5.640e-3635.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B7FYW7_PHATC1.360e-3437.62Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
D8LRU5_ECTSI5.100e-3133.66Novel Sm-like protein with long N-and C-terminal d... [more]
A0A7S2JUH1_9STRA3.120e-2734.94Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1V9Z4Q3_9STRA5.220e-2534.57Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2DIJ2_9STRA7.740e-2533.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A662XUA1_9STRA9.490e-2532.75Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A1Y1YN51_9FUNG1.080e-2432.88Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_92contigContig_92:496149..502235 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351515|estExt_Genemark1.C_Ctg_920047
BRITEko00000,ko03019
KEGG koko:K18749
GOsGO:0000226,GO:0000242,GO:0000932,GO:0001817,GO:0001819,GO:0001959,GO:0001961,GO:0002218,GO:0002221,GO:0002252,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002753,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006417,GO:0006446,GO:0006950,GO:0006952,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010646,GO:0010647,GO:0015630,GO:0016043,GO:0017148,GO:0017151,GO:0019222,GO:0019899,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0030029,GO:0030036,GO:0030522,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031347,GO:0031349,GO:0031369,GO:0031370,GO:0032268,GO:0032269,GO:0032991,GO:0033962,GO:0034063,GO:0034248,GO:0034249,GO:0034622,GO:0035556,GO:0035770,GO:0036464,GO:0039528,GO:0039529,GO:0043186,GO:0043207,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044764,GO:0045088,GO:0045089,GO:0045169,GO:0045495,GO:0045947,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051233,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0060293,GO:0060338,GO:0060340,GO:0060759,GO:0060760,GO:0065003,GO:0065007,GO:0070925,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0097159,GO:0098542,GO:0098586,GO:1901363,GO:1904688,GO:1904689,GO:1990124,GO:1990904,GO:2000112,GO:2000113,GO:2000765,GO:2000766
Preferred nameLSM14A
Descriptioncytoplasmic mRNA processing body assembly
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1073@1|root,KOG1073@2759|Eukaryota
Evalue4.57e-45
Seed ortholog2880.D7FK17
Hectar predicted targeting categoryother localisation
TranscriptId351837
TrackFilteredModels1
ProteinId351515
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351515gene_14617Tribonema minus UTEX_B_3156 geneContig_92 496149..502235 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351515Trimin1|351515|estExt_Genemark1.C_Ctg_920047Tribonema minus UTEX_B_3156 polypeptideContig_92 496550..502083 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_14617_9exon_14617_9Tribonema minus UTEX_B_3156 exonContig_92 496149..496643 -
exon_14617_8exon_14617_8Tribonema minus UTEX_B_3156 exonContig_92 497101..497252 -
exon_14617_7exon_14617_7Tribonema minus UTEX_B_3156 exonContig_92 498163..498327 -
exon_14617_6exon_14617_6Tribonema minus UTEX_B_3156 exonContig_92 499189..499268 -
exon_14617_5exon_14617_5Tribonema minus UTEX_B_3156 exonContig_92 499484..499583 -
exon_14617_4exon_14617_4Tribonema minus UTEX_B_3156 exonContig_92 500641..500715 -
exon_14617_3exon_14617_3Tribonema minus UTEX_B_3156 exonContig_92 500931..501089 -
exon_14617_2exon_14617_2Tribonema minus UTEX_B_3156 exonContig_92 501413..501457 -
exon_14617_1exon_14617_1Tribonema minus UTEX_B_3156 exonContig_92 501970..502235 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_14617UTR3_14617Tribonema minus UTEX_B_3156 three_prime_UTRContig_92 496149..496549 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_14617CDS_14617Tribonema minus UTEX_B_3156 CDSContig_92 501970..502083 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_14617UTR5_14617Tribonema minus UTEX_B_3156 five_prime_UTRContig_92 502084..502235 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14617 ID=mRNA_14617|Name=jgi.p|Trimin1|351515|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1537bp|location=Sequence derived from alignment at Contig_92:496149..502235- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGTAACGCACATAGCACCGCTCTCACGCTGCTGCAGATACTAGCAGGCA
AGGAGAGGAGTGTGCGGAGTGCGTTGTGGTCATCTGGAGCAAAGCTGCAG
CGAACAGGAGGAGGGAGCATTGGTGCTAGTTTGAAGCGGCGTAGGGAGCG
GGATGAGCTCTCAGCAGCTGATCGGCAGCCGAATTTCGCTGATATCTAAA
AAGGATATCCGATATGAGGGCATTCTCTATGGCATTGACGTCGAGAACTC
CTCCGTCACACTGCAGGATGTAAAAAGCTGGGGCACGGAGAACAGGGTGG
AGGGCCCACAGGTGCCCGCATCGGATGAAATCTTTGGGTGCATAGTGTTC
AGGGGGCAGGACATCAAAGACCTGCACGTTCACGACACACCTGCTGAAGC
ACCCAAACCTGCACAGCCCATGGTGGCGCCGCCCCCGGGGGCACTGGGGC
CGCCGCCCGTGCCGGCACAGGAGCAGCAGCAGAGGGCAGACACAGGAAAG
CTGGAGGGAGGAGGGAAGCCCGCTAAGTACCAGCCTCCGCACAAGAAACC
CAACTTCAAGCCCAAGGGAGAAGGGGGCAAGCGGGGAGGGGACAGCGCTC
CACCAGGCCCCAGTGGCCCGCACGCGATCCCAGGCAAGACCGTAGGCACT
GGGGACCACCTCATGGCAAGGCCCAACAGGGGGGGCGGGGGGATCGCTGT
GGAATCGGAGGAGTTTGACTTCCAGGCTGCGCTGTCGCAGTTTGACAAGG
ATGCGGAGAGGACTGAGATCTATGGCGTGGGGACGGCGGCGGATGCTGCG
GGGGGTTTGGACGGCGGGGAGGCACTGGCACTGGCGGCGGCGCCTGCCCC
CGCGCCCAAGAAGTACAACAAGAGCAGCTTCTTTGATGAGATCTCGTGCG
ACGCCCTGGATGGGAGGCACAGGGTGCCGGGCTTCACGGAGCGGAAGCTC
AACACGGAAACATTCGGCGCTACTGGCGTCAACACAGGCAACAGGCAAGA
CCGCGTGCTAAATTTGGTTATTAAGGAGCAGCACTTGCTCGCGCGCTACC
AGGGGAGGGGGCGCGGGGGATACAGGGGGGGGTACAGGAGCTACAACCAG
CGCAGTGGCAGTGGCACGCAGGGCACCAGCACCTGAATGTCGTGTACACC
TAGTTTTGGCCATGACTGCTTAGATGCCAGCCTCACCGTGTGTGCGTGGT
TCGTAATCGGCGGTGTAAAGCTAGGCTAGGCGGACTGTCGCGAGGGGGCC
ACGTTGCGCGGCTAGGTGGCTGCTGCAGTGGCGATCCCCGGGGTGCACTA
CTCATTAGCGCAGAGCATACGCTGGGCGAGGAAAGAGAGAGAGGGGGAGG
AGACATATGGTGCAGAGGTTGTGGGTGTGGGGCATGTACTCTGGAAGTAC
CATTGCTGCCCTCTATACGCCGTGTGATACATATCGTGCACGCCACATGA
ATGGCCTCTACCACTGGAGACAGGTGCTCTCTGCGCGGCAGCCGATGCCG
CTCGCTGTAAATGGAGAACGCTGCTGCTGCTGTTCAA
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protein sequence of jgi.p|Trimin1|351515

>Trimin1|351515|estExt_Genemark1.C_Ctg_920047 ID=Trimin1|351515|estExt_Genemark1.C_Ctg_920047|Name=jgi.p|Trimin1|351515|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=328bp
MSSQQLIGSRISLISKKDIRYEGILYGIDVENSSVTLQDVKSWGTENRVE
GPQVPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKPAQPMVAPPPGALGP
PPVPAQEQQQRADTGKLEGGGKPAKYQPPHKKPNFKPKGEGGKRGGDSAP
PGPSGPHAIPGKTVGTGDHLMARPNRGGGGIAVESEEFDFQAALSQFDKD
AERTEIYGVGTAADAAGGLDGGEALALAAAPAPAPKKYNKSSFFDEISCD
ALDGRHRVPGFTERKLNTETFGATGVNTGNRQDRVLNLVIKEQHLLARYQ
GRGRGGYRGGYRSYNQRSGSGTQGTST*
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mRNA from alignment at Contig_92:496149..502235-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14617 ID=mRNA_14617|Name=jgi.p|Trimin1|351515|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6087bp|location=Sequence derived from alignment at Contig_92:496149..502235- (Tribonema minus UTEX_B_3156 )
CAGTAACGCACATAGCACCGCTCTCACGCTGCTGCAGATACTAGCAGGCA AGGAGAGGAGTGTGCGGAGTGCGTTGTGGTCATCTGGAGCAAAGCTGCAG CGAACAGGAGGAGGGAGCATTGGTGCTAGTTTGAAGCGGCGTAGGGAGCG GGATGAGCTCTCAGCAGCTGATCGGCAGCCGAATTTCGCTGATATCTAAA AAGGATATCCGATATGAGGGCATTCTCTATGGCATTGACGTCGAGAACTC CTCCGTCACACTGCAGGTGAGCCAGCTGTTCTTGTTAGCAAACGCAAAAT TACCTCTTGCAGGCTCGATGCTCACCTCCGGCAGCTTCATGATACACTGT GGTCATTGAGTTATCAATGCTCATACAATCAAACCATTCATATAATGACG CTGAGTATCACCTTCCACCACGAATGCGTCTGCGGCATTGCAATCGGCAT GCACAACTGATCTTCAACTACATCTGGACTGCTCAGTGCGGCCAGGCACT CCATGGGATTTTCTCTTGATGTTGAGTCTAGTAGCCATGCCATGATGCTG CAATCGATGGTCTTGATCTGTTATACTTTGTCGACCTGCAGCTGCAGAGG GCTTGTTTGTCTGTCCCTGTTTCCTGTTGCAGTCTACCATGTGCTTGAGC TGAGAAAAGCGGTCGAGGGCTCACCTGCAAGCGCGCATACATGCAATCAA CAAAACTAGTGCCCGCTTTTGTCTCTGAAAACTCATGACCCCTCTTAACT CTGTCTCTTGCGCTGCCCTCCGCCGCAGGATGTAAAAAGCTGGGGCACGG AGAACAGGGTGGAGGGCCCACAGGTATGCAAGTATGCCAGAAAGCGCAGA GAGATCAACGCCGTATGTCGTTGACAATGTTTGTAGCGACTGGCTGCGTG CGTATACTCACACTGATGCTCATACTCCTGAGCACTGCTGACTCATCAGC TGGAGCTACACAAAGCACCAGGCAGTGGCGCGCCAAACCATCCATGCACA GAGGCTGCACTACGAGTGACACTTTTGCTGATCGCCCTGCAACTGCATTG CATCAACACCGTGATTGCGCCGCTGTCTGCTGACAACGGCCACGAACTTT CTCAATTAACTTCTATGAACGCTGCGCTGTGTGCGCTGCCTCACAGGTGC CCGCATCGGATGAAATCTTTGGGTGCATAGTGTTCAGGGGGCAGGACATC AAAGACCTGCACGTTCACGACACACCTGCTGAAGCACCCAAACCTGCACA GCCCATGGTGGCGCCGCCCCCGGGGGCACTGGGGCCGCCGCCCGTGCCGG CACAGGTAACTTCAACTTGAACTTCAAGTGCTGCGCGCGTGTGGTGTTGG GGTAGGGAGGTTGCGGTTGGGTATGTCATAGAGTGCAGGTTGTTGTACAG CAGAGCTCACAATGGTGGTGTGCAACGACTCACTTTGCTGGGTCTGCCTT GCTTACTTGTCCCCAATGATTCATTGCAACAACATCTGTCTCCGCACTGG CTCTCAATCTGCTGCATCAGGAGCAGCAGCAGAGGGCAGACACAGGAAAG CTGGAGGGAGGAGGGAAGCCCGCTAAGTACCAGCCTCCGCACAAGGTCAG TTGAGCGCTGCCAATTTTATCATTTGTGGGTCATTGCACTACCATATTTA TGTACCGTCTTGTCTATAATTAATGACACTGGACGGCTTTTTTGTTGGTT TTAACGCCATAACCAAAACATAGGACACCCTTTTAATTGCTGCATCAAAA AGATGTCCACCCCATATATAAATGCTTCAACAATAAGATGTTCACCCCTC TTTGTGTGCCACACAGTCCAATTACTATGTTCACGCCATGTTCAGAGCAA AGCTGAACTTGCTCGTGGTGCTGGAGCTGGGCCAGGCGGTGCTGCTGTAC GTTGCTGCATGACTGGCTCGAAGCCTAATAGACGCTGTTTACCAGCTTTG ACCTCTGTTCAATGGATACCTGCAGCACTTTGGTACTTCGAAGGCTGTTG TTGGGGCACACGGACCCTGACAAAAAAAAAACCTGGCTATGGGGCGAAAC GCTTTGAAACGTTTTTTTGCGGCTCCGCTGTTTCGCGAGATTGCGAGCGG TAATCATCCCTGAAGAAGGACGTAGTGCATCGAAGTAGATCTTTGTGCTC TTCTTAAAATGCGTCCACCCCTTTTAATTGGCTGCGCGAAAAGGACGTCC ACCCCCCCTTTTTACGCGGAAACAAAAAAGCCGTCCAGTGTCCTTGATTA TAGACAAGACAGTATCCTGTACACATTCAAAGCACAAGTGTTGGAGTACA CAGGTCAAAGCACGCCTGGCTGTACACCATTCATGACCGGGTATTGGCAC GCCGCTTCACTGCACCTGCGTATGTCTTACCTACTCTTTGCTGCAGATTT ATGCATGCTAGCGCTTGCTGTCTTTGCCTCACATTCAGAGCAAGCATCAA GCTGGAACGGACGAGGCAGGGGTGCATCGGAAATTGATGCCCTATTGGCG CACCTGGCAGGTTGCAGAGCACGCATAAGTTCAACCCCCAGTTCCAATAG CATGTGACGCCATATATCCTCAGTCATGCGCACTGATTCAATGGAGCACT GAAGCTGACATGAAACATGGGCGCGCACGTGTTTGCTGTTTGACGTTTGC AGAAACCCAACTTCAAGCCCAAGGGAGAAGGGGGCAAGCGGGGAGGGGAC AGCGCTCCACCAGGCCCCAGTGGCCCGCACGCGATCCCAGGCAAGACCGT AGGTTGAGGTTGAACTTGTGCTCAAAAACATCACCTGACAGTCAGTAGTG GACTCACTGCGCGCTACGTTGCTGCTGGTCGCAGCCTTCACACTGGTCGC AGGCTTTCATGACATCTCAAATATGTGGCACTCGATTGCTCCACATTCTA TTTGGCACTGAATGCCGCTCACCCCGATGTGGTTGTATGCTTTTTCTCCA TGTTTAACCGCTTACAGGCACTGGGGACCACCTCATGGCAAGGCCCAACA GGGGGGGCGGGGGGATCGCTGTGGAATCGGAGGAGTTTGACTTCCAGGTA AGACGCGGTCATGACAAGGTGTAACTTCAACTTCAAGGGGGGGGGGGATA CTGGTACAGAGGTGAAAATCAGCACAGCCAGCTGGTGTGCTTGGCTGTCG ATAGCGTGGTATGGTGTGCAGGTCATGATAGAGTTCCGTGAGTGTCACGG CCGTTGCCTGTGCGCGAAGGGCAGCGCGCTTTTCCGTACTTCAAGAGCGG CTGTTGGAGGCGACAGCAGGAGCATCAGTCTAATCTCTTGGCTTACGCCC TCGCTGCTACTGCACTTGGACTTCAGGATTATCAAGGTGATGTCAGCTTT TCAAAAAAAAGTTTTTGAAGCAAAAGAAAAAGAGGAAATCGCATACTTCG TAGTACATTCGTTCAAGTTCTGCAGTGCAGATGCTTTCGGCTGTGTTGAA GTCTGGGGCTCACTGGGTCTTGTGTCGTATTGTTGTTGAATTTCGAACAC TTGTGATGTGACGATTGCTGGAAGGTCATCAGTGATGGACAGGCATGCTG TGACTGGCCTTGCTCCAAGCTGGCTCCTGGAGACGCTGGTAGCAGTTCGG TACGTGTATGAAGACCAGCGGCCTCTGCGCGCAGAGCCACACACTTGAAG TAAAACACCATAGTCGAAGTACAACACCTACTCCGCGCTTAGCAGCTTGC TCAGTTTTTGATCAATGCCACTGTGTACTCTGATTATCAGTGATTGACTG AGCGCCACAAGGTGGTCGATTGCATGGCACTCGACACGTGGCACTCGCTT CCCTCTCTCCCAACGCCTTTGGCTGGTTCCTGAGTAAAATGGACTTCATT CTGAGCCGAAGTTGTTGAACACTTTGACATGAAACCATCGTCATCATCGG CTGCACAGGCTGCGCTGTCGCAGTTTGACAAGGATGCGGAGAGGACTGAG ATCTATGGCGTGGGGACGGCGGCGGATGCTGCGGGGGGTTTGGACGGCGG GGAGGCACTGGCACTGGCGGCGGCGCCTGCCCCCGCGCCCAAGAAGTACA ACAAGAGCAGCTTCTTTGATGAGGTGCGTTGCCGCTTGAAGTTTTTCACA GCTTGAAGTTGTTCACTTGTGCTGCAACTCATCAGGGGTCTGTGCTTGTG GTCAGGGGTGGTGGCACAGCACCGGCGCTGGTGGCTGCTTTTATGCAGGG ATGTAACATACTTCAACTTCAACTTGACCTTGCTGTAGGCGCAGCAAAAA AAATGCGACATGCCAGAAGCTTTGTTGGCTGCTGAGTTGCGTGTCACAGG CACCGTCTGTGCTGTGATCGGGGCCAACAGTCTCAATGTGGTCAATGGTA CCGCGCAGCCTCTGCTTCAGCAACAGGCTGGATGTACCATAACGCTTCCT CATTATGTGCCATGTGCTTTGATCAAGTTATGGCTGGTTGTAGGGCAAGG TGCTGGTGGCTGAGACATAGCATGAATGTCCTGTGCTGTTCATGCTCTTG TGCCTGCGTGTCAGAAGCATATCATCAGCAGCTTACTTTAGGTAGGAAGT GGGTACGGCAGCTGCCATCTATGCTTCCGGAAAGTGATGTCAGAGGCAGT GTTTGCTGCGATCTTACTGGCCTGTGGGAGATTGTGACAAAGTAGCTGGA CATGTTTGCCGCTACTTCGAAAAAGAGCCTCAAAAAGTAGACAGCCGGCT TGTCCATGAACACCATGAGTGCGGAAGCATGTAGTCCTTGTACGCTCACT GCGTGCTTGTCACAAAGTGCCATTCACTGCAGTTGCGTGTCCCATGCTGC TGAGTGGGCGACACAGGGCCAACTTCAACACTCAACCTCAACACTTTTAA GATTTCTGAATCGTGCCCATAGACGTGCGCTTGTCATGTGCTGTCGAAGC GTCGTGTCAGCGCACCTACCAACGTGTTTGCCCCTTGACATGTGCACTAC GTATGTATGTGATTTATGCACATGTGCATGCAGATCTCGTGCGACGCCCT GGATGGGAGGCACAGGGTGCCGGGCTTCACGGAGCGGAAGCTCAACACGG AAACATTCGGCGCTACTGGCGTCAACACAGGCAACAGGCAAGACCGCGTG CTAAATTTGGTTATTAAGGAGCAGCACTTGCTCGCGTTCCAATGTGGGCT TGCTGCATTGGCAGGTGAAATTGGCTTGTTCGTTTCAATCACAATTTGAC AGTTGCAGCACCCACGTGCATATGGGCCTTGCTATAGAGATGAGTTTTTG TGATGCCGTTTGCAATGTGGGTATGCTCATGCCGCCGCCTTCAAAGCTCA TCAATAGACATGGTTATTGTAAAGCTCGGCACAGACATGAAGCTTGCCGT AGCAGTATTCCATTGCAGTCAGTGCATGGGTTGAAATGTGCGTATAGTGC AGCTCAAGCTGCTCAATATATATACTGCATGTGTTGTGTTGACGACAGAG AGCCATGCTGTTGCGCTACATTGCCAGCCGGTACTTGCACTTTTGTGATG CACGCTGACACAGGCAGCTCTTGGTTTGGCACAATGCTCATGTCGCAGTT CTTTCATTCTGTTGCACACACCTCATGTGCGCGTTTGTGCAGGCGCTACC AGGGGAGGGGGCGCGGGGGATACAGGGGGGGGTACAGGAGCTACAACCAG CGCAGTGGCAGTGGCACGCAGGGCACCAGCACCTGAATGTCGTGTACACC TAGTTTTGGCCATGACTGCTTAGATGCCAGCCTCACCGTGTGTGCGTGGT TCGTAATCGGCGGTGTAAAGCTAGGCTAGGCGGACTGTCGCGAGGGGGCC ACGTTGCGCGGCTAGGTGGCTGCTGCAGTGGCGATCCCCGGGGTGCACTA CTCATTAGCGCAGAGCATACGCTGGGCGAGGAAAGAGAGAGAGGGGGAGG AGACATATGGTGCAGAGGTTGTGGGTGTGGGGCATGTACTCTGGAAGTAC CATTGCTGCCCTCTATACGCCGTGTGATACATATCGTGCACGCCACATGA ATGGCCTCTACCACTGGAGACAGGTGCTCTCTGCGCGGCAGCCGATGCCG CTCGCTGTAAATGGAGAACGCTGCTGCTGCTGTTCAA
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Coding sequence (CDS) from alignment at Contig_92:496149..502235-

>mRNA_14617 ID=mRNA_14617|Name=jgi.p|Trimin1|351515|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=984bp|location=Sequence derived from alignment at Contig_92:496149..502235- (Tribonema minus UTEX_B_3156 )
ATGAGCTCTCAGCAGCTGATCGGCAGCCGAATTTCGCTGATATCTAAAAA
GGATATCCGATATGAGGGCATTCTCTATGGCATTGACGTCGAGAACTCCT
CCGTCACACTGCAGGATGTAAAAAGCTGGGGCACGGAGAACAGGGTGGAG
GGCCCACAGGTGCCCGCATCGGATGAAATCTTTGGGTGCATAGTGTTCAG
GGGGCAGGACATCAAAGACCTGCACGTTCACGACACACCTGCTGAAGCAC
CCAAACCTGCACAGCCCATGGTGGCGCCGCCCCCGGGGGCACTGGGGCCG
CCGCCCGTGCCGGCACAGGAGCAGCAGCAGAGGGCAGACACAGGAAAGCT
GGAGGGAGGAGGGAAGCCCGCTAAGTACCAGCCTCCGCACAAGAAACCCA
ACTTCAAGCCCAAGGGAGAAGGGGGCAAGCGGGGAGGGGACAGCGCTCCA
CCAGGCCCCAGTGGCCCGCACGCGATCCCAGGCAAGACCGTAGGCACTGG
GGACCACCTCATGGCAAGGCCCAACAGGGGGGGCGGGGGGATCGCTGTGG
AATCGGAGGAGTTTGACTTCCAGGCTGCGCTGTCGCAGTTTGACAAGGAT
GCGGAGAGGACTGAGATCTATGGCGTGGGGACGGCGGCGGATGCTGCGGG
GGGTTTGGACGGCGGGGAGGCACTGGCACTGGCGGCGGCGCCTGCCCCCG
CGCCCAAGAAGTACAACAAGAGCAGCTTCTTTGATGAGATCTCGTGCGAC
GCCCTGGATGGGAGGCACAGGGTGCCGGGCTTCACGGAGCGGAAGCTCAA
CACGGAAACATTCGGCGCTACTGGCGTCAACACAGGCAACAGGCAAGACC
GCGTGCTAAATTTGGTTATTAAGGAGCAGCACTTGCTCGCGCGCTACCAG
GGGAGGGGGCGCGGGGGATACAGGGGGGGGTACAGGAGCTACAACCAGCG
CAGTGGCAGTGGCACGCAGGGCACCAGCACCTGA
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