mRNA_14369 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Match: A0A835ZAL8_9STRA (Protein-tyrosine phosphatase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL8_9STRA) HSP 1 Score: 254 bits (649), Expect = 1.160e-85 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1 Query: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQLAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASLFARP 384 AADLDTMQKLGIVRVVNCTRGCPNFHPDQLAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASLFARP Sbjct: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQLAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASLFARP 128
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Match: A0A836CCP8_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP8_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.000e-48 Identity = 84/127 (66.14%), Postives = 101/127 (79.53%), Query Frame = 1 Query: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQLAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASLFAR 381 AADL+ M++L IV V+NCTR CPNF+P++L Y++L L D+ Q ISHCF+ V +AI+ AR GG CLVHCTAGISRS AL IAYLM+++RW LAAALAH+Q RPS SP PAFMAQLAAYE LF R Sbjct: 31 AADLEAMRQLRIVIVINCTRSCPNFYPEELVYVQLGLEDSERQCISHCFEGVAAAIEHARTLGGVCLVHCTAGISRSAALAIAYLMRSQRWPLAAALAHVQARRPSASPRPAFMAQLAAYEVGLFGR 157
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Match: A0A835ZGG2_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGG2_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.640e-24 Identity = 60/125 (48.00%), Postives = 78/125 (62.40%), Query Frame = 1 Query: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQLAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASLF 375 AAD D +++ GI ++NCT P F P+ YL + L D+ Q I ++ ID AR CLVHC+AG+SRS ++VIAYLMK + SL AL ++ RPSVSPN FMA+LA YEA LF Sbjct: 27 AADQDALRRHGISHIINCTSRHPYF-PEHFNYLCVPLRDSPDQPIREVLESCFQLIDEAREQDTCCLVHCSAGMSRSASIVIAYLMKREGMSLLEALGFARERRPSVSPNSGFMAELARYEADLF 150
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Match: UPI0018854F3F (dual specificity protein phosphatase 10-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018854F3F) HSP 1 Score: 102 bits (254), Expect = 2.680e-23 Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQ-LAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASL 372 A DL ++ GI RV+N T P +H +Q ++Y L AD+G Q IS FD V IDCAR G LVHC AG+SRSP + IAY+MK S+ A H++ RP +SPN FM QL +E L Sbjct: 240 AKDLVGLKSCGITRVLNVTAHVPGYHQEQGISYKTLPAADSGQQNISQYFDEAVEFIDCARRLGARVLVHCVAGVSRSPTIAIAYIMKRLPMSMLEAYQHVKARRPIISPNLNFMGQLLEWERRL 364
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Match: UPI001C924BBC (dual specificity protein phosphatase 10-like n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C924BBC) HSP 1 Score: 101 bits (252), Expect = 1.110e-22 Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQ-LAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASL 372 A DLD+++ GI RV+N T P +H Q ++Y L AD+G Q IS FD V IDCAR G LVHC AG+SRSP + IAY+MK S+ A ++ RP +SPN FM QL +E L Sbjct: 317 AKDLDSLKNCGITRVLNVTAHVPGYHQQQGISYKTLPAADSGQQNISQYFDEAVEFIDCARRLGTRVLVHCVAGVSRSPTIAIAYIMKCLPMSMVEAYQLVKARRPIISPNLNFMGQLLEWERCL 441
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Match: A0A814GHY3_ADIRI (Hypothetical protein n=1 Tax=Adineta ricciae TaxID=249248 RepID=A0A814GHY3_ADIRI) HSP 1 Score: 100 bits (248), Expect = 1.680e-22 Identity = 56/126 (44.44%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQLAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASLFA 378 A +LD + + GI ++NCT P + + YLRL++ D Q I F+ + ID A + G LVHC+AGISRSP LV+AYLMK KRW+L A M+K R V PN +F+ QL +E +L A Sbjct: 200 AQNLDRLTEHGITHIINCTPDLPFYWEKKHEYLRLDVLDLPSQNIRKHFETAIDFIDKALQSNGKVLVHCSAGISRSPTLVLAYLMKKKRWTLDEAFEKMRKLRRIVDPNVSFIIQLREWEKTLMA 325
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Match: UPI001C70FE58 (dual specificity protein phosphatase 10-like n=2 Tax=Penaeus TaxID=133894 RepID=UPI001C70FE58) HSP 1 Score: 99.4 bits (246), Expect = 5.170e-22 Identity = 56/125 (44.80%), Postives = 75/125 (60.00%), Query Frame = 1 Query: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQ-LAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASL 372 A DL +Q LGI RV+N T P +H D + Y L D+GHQ + FD + ID AR +G LVHC AG+SRSP +VIAYLMK R ++ + +++ RP +SPN FM QL +E +L Sbjct: 268 AQDLRVLQALGITRVLNVTSHVPGYHQDSGICYKTLPAMDSGHQNLRQYFDEAIHFIDEARQSGERVLVHCQAGVSRSPTIVIAYLMKHTRRTMVDSYKYVKARRPIISPNLNFMGQLVEWETAL 392
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Match: UPI001E673A3E (dual specificity protein phosphatase 10-like isoform X1 n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E673A3E) HSP 1 Score: 98.6 bits (244), Expect = 9.220e-22 Identity = 57/125 (45.60%), Postives = 75/125 (60.00%), Query Frame = 1 Query: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQ-LAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASL 372 A DL +Q LGI RV+N T P +H D + Y L D+GHQ +S F + ID AR AG LVHC AG+SRSP +VIAYLMK R ++ + +++ R +SPN FM QL +EA+L Sbjct: 259 AQDLRVLQALGISRVLNVTSHVPGYHEDSGICYKTLPAMDSGHQNLSQYFHEAIHFIDEARQAGARVLVHCQAGVSRSPTIVIAYLMKHTRMTMVDSYKYVKSRRLIISPNLNFMGQLVEWEAAL 383
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Match: A0A0N7ZBB6_SCYOL (Protein-tyrosine-phosphatase n=4 Tax=Pleocyemata TaxID=6692 RepID=A0A0N7ZBB6_SCYOL) HSP 1 Score: 97.1 bits (240), Expect = 3.590e-21 Identity = 55/125 (44.00%), Postives = 74/125 (59.20%), Query Frame = 1 Query: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQ-LAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASL 372 A DL +Q LGI RV+N T P +H D + Y L D+GHQ + FD + ID AR +G LVHC AG+SRSP +VIAYLMK R ++ + +++ R +SPN FM QL +E +L Sbjct: 267 AQDLRVLQALGITRVLNVTSHVPGYHQDSGICYKTLPAMDSGHQNLRQYFDEAIHFIDEARQSGARVLVHCQAGVSRSPTIVIAYLMKHTRMTMVDSYKYVKARRIIISPNLNFMGQLVEWETAL 391
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Match: UPI0008F9C427 (dual specificity protein phosphatase 10-like isoform X1 n=3 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9C427) HSP 1 Score: 97.4 bits (241), Expect = 4.320e-21 Identity = 57/129 (44.19%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 1 AADLDTMQKLGIVRVVNCTRGCPNFHPDQ-LAYLRLELADAGHQKISHCFDAVVSAIDCARAAGGACLVHCTAGISRSPALVIAYLMKTKRWSLAAALAHMQKCRPSVSPNPAFMAQLAAYEASLFARP 384 A +LD ++ LGI RV+N T P +H ++ + Y L AD+ HQ + F+ I+ AR +GG+ LVHC AGISRSP + IAY+MK +R SL A ++ R +SPN FM QL E SL A P Sbjct: 375 AENLDVLRNLGISRVLNVTSELPGYHEERGILYKHLPAADSSHQNLKQYFEEAFHFIEEARQSGGSVLVHCQAGISRSPTIAIAYMMKHRRLSLIEAYKEVKNARTIISPNFNFMGQLFELEQSLKATP 503 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|136236 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14369 ID=mRNA_14369|Name=jgi.p|Trimin1|136236|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=384bp|location=Sequence derived from alignment at Contig_130:79629..80215+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCGGCAGATCTGGACACCATGCAGAAACTCGGCATAGTGCGCGTTGTCAAback to top protein sequence of jgi.p|Trimin1|136236 >Trimin1|136236|gw1.130.21.1 ID=Trimin1|136236|gw1.130.21.1|Name=jgi.p|Trimin1|136236|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=128bp AADLDTMQKLGIVRVVNCTRGCPNFHPDQLAYLRLELADAGHQKISHCFDback to top mRNA from alignment at Contig_130:79629..80215+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14369 ID=mRNA_14369|Name=jgi.p|Trimin1|136236|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=587bp|location=Sequence derived from alignment at Contig_130:79629..80215+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_130:79629..80215+ >mRNA_14369 ID=mRNA_14369|Name=jgi.p|Trimin1|136236|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=384bp|location=Sequence derived from alignment at Contig_130:79629..80215+ (Tribonema minus UTEX_B_3156 )back to top |