mRNA_14203 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_14203 ID=mRNA_14203|Name=jgi.p|Trimin1|101142|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=862bp|location=Sequence derived from alignment at Contig_97:183068..187925- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCAACATATACACGCTTGGAGCATTCTACACACAGCTACCAACGATGATG
TCCATGAAGCTGTGCGTGGTTCTGCTGGCCCTCCTGGCGTGCGTGTCCGC
ATTCGCACCTGTTGGCTCGGGCCGCTCTCTGGCAAGAAGCGCTGTGGCGA
CGCGGCGGGCCGTGCGGCAGCTGCGCATGAGCGAGAGCGAGACGGAGGAG
GAGCAGGCAGCGGCCATCGTGGAGGAGGAGGAGGTTGTGGAGGACGAGGC
GGAGGCGCCGCAGTTCGGACAGAGCGGCTTCTTCCAGCCCAACGCCAACA
TGCGGTACGGCGCATCGCGGGACCAGGATGGCAAGTCCAACGTGTGGGCG
ATCGAGCCCAAGATGAAGGTGGAGGAGGGCGAGAACAAGGGAGCGTCGCT
CGCCACCGGCGCCATCATCCTGGCGGTCGCCGCCGCGGCTGTTGTAGCAA
CGCTCGCCAACCTGCCGTCCCCGGACACCTACTAGGCGGCTCGGCCGATA
GCAGCGCTCACACATCAGGGGGGTGGGGAGGGGGGGGCTGCTGGTGGCAA
CAGATAGTACCTGGTGCGGAAAGGGCGTGCAACTTTTGAAGTTGTAGTTG
AAGTTGTGGCAGAGCGGGAGGCGGGGGTGTGTCCTGTGTCCCTCAGGGCA
GTGGCCGGGGGGTGACTGGCGGTCGGAGCTGAAGGGCAAGGGTCGTGTTG
GGGAGGGAATTTGTTGTGATTCCACTTGCCAGTACTCGAGGGTGGGGGAA
GGTCCTCCCAGAGGCTCAAATTGGTGCCATGGTTGCCCATGCATTCGAGG
GAGGAGCACTGGCTTGTTAGTTATTGATGTCTTCTTTTAGCGGAGTGATA
GAGGGGGGGGGC
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protein sequence of jgi.p|Trimin1|101142

>Trimin1|101142|CE101141_244 ID=Trimin1|101142|CE101141_244|Name=jgi.p|Trimin1|101142|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=147bp
MMSMKLCVVLLALLACVSAFAPVGSGRSLARSAVATRRAVRQLRMSESET
EEEQAAAIVEEEEVVEDEAEAPQFGQSGFFQPNANMRYGASRDQDGKSNV
WAIEPKMKVEEGENKGASLATGAIILAVAAAAVVATLANLPSPDTY*
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mRNA from alignment at Contig_97:183068..187925-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_14203 ID=mRNA_14203|Name=jgi.p|Trimin1|101142|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4858bp|location=Sequence derived from alignment at Contig_97:183068..187925- (Tribonema minus UTEX_B_3156 )
GCAACATATACACGCTTGGAGCATTCTACACACAGCTACCAACGATGATG TCCATGAAGCTGTGCGTGGTTCTGCTGGCCCTCCTGGCGTGCGTGTCCGC ATTCGCACCTGTTGGCTCGGGCCGCTCTCTGGCAAGAAGGTAAATTGCCC ATGTAAACGATTGCTGTTGGCTTTTGTGGCGCTGCGCGCAAAGCATCCAT AGTTTAGCGCTCATCTGCTGTGTGCAACTTTGCTAGCAGTGCATAGCGCT GAAGTACCTGCTAGACCCGATGCCACATCGGCTCACCGCTTGATGTGGAA CACAGTGACCACAGCAGAGCCGTTCCAGTAGGTGTGGGTATCTGCCGTCA GCGATCGAGTGGTCAGCGCAGCTGTAGAATGTGACCGTGAAGTTTGCCAT ACCCTGTCTCGCTGGACGTGCATCACCATGCGTTGCGCGGTGCCCATTCA CATATGTACGCCTCTTTGCCGGCGCAGTTTCAGCGTCGGCCCTTCGAAAG CTGTTAGCGAACAGTATTAGCAGCTTTGAAGTGATGGAATTAGCCAGCTA CTGGTGATACGCGTATCTTGCAGCACACCTAGTCAAGTTGTCCAGTATCG TCAGCTGCAGTCACCTAGCTGCAATCATTATCGGCGTCTGCACACAAAAT CCATAACATTCATTCCATGAACCCGCCATTGTGCAGCAACAACACTGCAC AGGTCGTGCACACAGAGAAGCAGACGCATATGGCAATCGTGTGGTTCACA CCGCCATTACATGAAGTTTCTCAAAGTGCGATGGAGTCACTGTAACAATG ACGTTTCACAACGATTGTGCCTGCGCTCGACAAGTTCTACAGTAGTCTGT GTAGTGCGTCCTTACTAGCGCTGGCCCTAGTCGCCAGGCTTGAAGTAACC ACACCGCAACGGCAACTGCGCTAGAGCGACATTTGAACCGAGTGTGCGTT GCTGACATGGCATAGCACAGTGTTCTTGGACACAATGCTAGGTGTGCCCA TTCAAAACGCAACATGACCACAGCACACCGCGTACACGTACATCACTGGC ATGCGTGCAGTGTTGTACTTGATTCATGGCAGGAGAGCGCTGCATTGTGC ATTTGCCAGTGCGTAGCTGCGCCGGCCCGAGACTAGGAAGGACAGACGTG CCACAGAACTTATTTCTAACCCTAACCCTCACCAGTCCTTCTGGTTGCAG CTCTTGGCTTAGCTGCATCGCACGTAGGTGCTGACTGTTCACAAATGAGT CATTCCGCAAGGGTCTGGACGCTTTTGGCGATGGAGTGCGGGGGCCAGTT CTCTCATTTGATTTGCAGAGGGGGGCTCATGTATTGCGCCAGGAAGCTCT AATTCTGCTTCATCATTTCGCTGCTGATGCTAGCGCTGTACTCGTGGCAC GGCTCGACAGCGCTGTGGCGACGCAAAGACGGGACGATGTATCGCTTTTT TCTAGTTCTCACATTGAGCTCGCGACTGGACTCGACTCCACTCACCCGTG ACTCGTCGCACTGCACTCGGGGTAATGTGTCGCATTGATTACGCCTTTTC CCAGTTCAACATTCAGCTCGCAACTCGACTCGACTCACCCGTGACCCGTC GCGCTGTACTCGTGGCGCGGCTCAAACAGCGCTGTGGCGACGCGGCGGGC CGTGCGGCAGCTGCGCATGAGCGAGAGCGAGACGGAGGAGGAGCAGGCAG CGGCCATCGTGGAGGAGGTGCGTCACCTGTGGTACTTAAAGTAGATAAGT CTGAGTACGTCAGAGAGAGACAGGGGGATATAAACTGGGGTGTTTGGAGG CGGCGCGTCACCTGCAGTTCTTAAGAGTACAGAAGCTTGGGTACATCAGA GAGAGAGAGGGAGGGGGGGGGGGTAGAAACTGGGGTTTGTGTTTTGTGGA GGAGGTGTGTCCCATAGTACTTGAAGCACAGCCGCTGATGACCGTTTCAT CATCCAGAGCGATGACACATTGACGTGTGGTGTTTGTGTTTGTATTCCTG ATCGCGGATGTCAAGGCGGCTTTTTGAGGCTGTGCAACGCGAGATGGATG AGTGTCACGCGGTGAAGCAGGATATAGGCATAATAGCGTCGACATGCAAG CGCGGTAGCGCTGCCTCTTTTTGTGTGGTGCGTTCCATCTCACTTCCGCG GCGTGCAGTCACCTATCACAGCTGTTGCAGCAGTAGTCCTTTCATGAACT GGTTGTTTGTTATGATCATATCATGCATCACACGTGCTGGGAGGAAGCGA AAACATTCTACGCTATTGATACTCTGTGATCATGCTTGAATGGTGCTGTC TTGGCTGTAGCTGGTACGTCCAGAGTTTGCAGGGCAGCTGGCCATTCACC AAGGATAGTTATAACACAAGCAAGTTATTTTTTTCTGTTCGTTAGCACTG TTTTTGAAAACTTCACCAGTGTCCTTCGTTACGTTGGGTGAACCCAGTGC AAGTTCATGTTCCGTTTAATTTTCAAGAAGCGGTCAACGGGGTTTGCGGC AAGCGGCGATATTGCGTTGTGACACTCGTCATTTGTGGGGTTAGAGATAG GGTCTCCCTCAGCTTGTATACGAAGGGCAGTCATTTTGTGTGGTGCACGT GTCATGACAGAAGGCAACAGTCATCGGCGCCTTTCAACAAAAAGCACCTG CATGATGTGCTATTCTAAGAAGGCAGCAGGGGACACCGCCGCGGAGCAGC CACAACCTCAACTGCAGCCGCAATTTACGAAATTGTGAATCAGCCAATAC CATTTTCTGTGCGCGCTGTCAACGTGTCGAAGCGCCTCCACGATGTCACC ACTCCAGCAGCAGGAGGCCAGCGGCGGATAAGACGGAAGGACGCTGCAGC GTCAACTTCAACACAATGCAGCGTAACTTCAAAACAAGGAGATGTGACGC AGAGAAATTGGCAGTAGTCCGTTCGCATGCACTTCAACCACAAAGTGCCT CCACGTTGTGGTTGGTGTTGCAACAAGAGGAGGCTGTGGAGGATGAGGCG CGGAGACGCAGTGTTAACTTCGACCACAGAGACGCTCCAGTGTTAACTTC AAAAAAAGAAGCGTGACGCATAAAGCATTGGGCAGTCAACCGTCTCTTCT CAACCTTAAGTGCCTCCATTCTGGTTACTATCCTGACAGAAGGAGGGCGT GCAGGAAGAGGTGGAGACGCCGCAGTATGAAGTTGAAAAGAGGGCAGCTC AAGTTCAACAAAAGGAAGCGTGACGAATGAAACATTCGGCACTAAATCGT CCCTCGCTCAATCACAAATGCATCATGTTGTGCTTGTTGCAGGAGGAGGT CGTGGAGGATGAGGCGGAGACGCCGCAGTGCTAACTGCACCAAAGAAAAT GTGACGCATTAACACTTTCAAAAGCAGTAAATCGTCCATTTCTCACTTAC AAGTGCCTCCATTCTGGGTACTCTTCTGACAGGAGGAGGTTGTGGAGGAC GAGGCGGAGGCGCCGCAGTTCGGACAGAGCGGCTTCTTCCAGCCCAACGC CAACATGCGGTACGGCGCATCGCGGGACCAGGATGGTGAGCGCTGCCGCA CACCTGTTGAGCACTGCTGCATACAGTATTATATTGAGCGCTGGCGCATG TGCGCCGCCGTGAAATATGTTACATGCGGTATGGCACGTTTCGTACGTTA TGTGCGGTGCGGCGAGTGTTGGAGTTCAGGGACGGTGAGCGCTGCCGCAT ACCTGTTGAGCGCTGTTGCATCTGGCGCATCCAGACTTGAGGTGAAGTTT GTGTTACATGCGGTACGGCGCGTCTCGTAAGCCGTAGTGAAGTGTCGTTC TACACGCGGTACGGGGCGTCGCGGGACCAGGACGGTGAGCGCTGCCGCAG ACCTGCTGAGCAATGCTGCATAGTGGTTGAGCATCCAAACTTCAAGTGAG GTCTGTTAGGCTGCGGCACGGCGCGTCCCGTATGCGGTAGTGAAGTGTTG CGTTTCTACATGCGGTACGGCGCGTGGCGGGACCCGAGATGGTGAGCGCT GCCGACCTGCCGAGCACTGCTGCATCTGCAGTTGAGCGCCGATGCATCCA CGCCAGAAGCGAAGTTTTGTGTGGTGCGCGGTACATCGCGTTTCCGTCGT CGCATGAATGCTGACGCCCGGTCGTCACTGTGCTCACTTGCTTTTGCACT CGGCAGGCAAGTCCAACGTGCGGGCGATCGAGGGCGAGAACAAGGGAGCG TCGCTCGCCACCGGCACTAATCCTGACTGCATAGGGATACGTTCTGTAGC GCCCGCGGCATCACAACCCATCTTCGCATGACCCCTGACGCTCAGTCTAC CCTGCGATTATTTCTGAACCCGGCAGGCAAGTCCAACGTGTGGGCGATCG AGCCCAAGATGAAGGTGGAGGAGGGCGAGAACAAGGGAGCGTCGCTCGCC ACCGGCGCCATCATCCTGGCGGTCGCCGCCGCGGCTGTTGTAGCAACGCT CGCCAACCTGCCGTCCCCGGACACCTACTAGGCGGCTCGGCCGATAGCAG CGCTCACACATCAGGGGGGTGGGGAGGGGGGGGCTGCTGGTGGCAACAGA TAGTACCTGGTGCGGAAAGGGCGTGCAACTTTTGAAGTTGTAGTTGAAGT TGTGGCAGAGCGGGAGGCGGGGGTGTGTCCTGTGTCCCTCAGGGCAGTGG CCGGGGGGTGACTGGCGGTCGGAGCTGAAGGGCAAGGGTCGTGTTGGGGA GGGAATTTGTTGTGATTCCACTTGCCAGTACTCGAGGGTGGGGGAAGGTC CTCCCAGAGGCTCAAATTGGTGCCATGGTTGCCCATGCATTCGAGGGAGG AGCACTGGCTTGTTAGTTATTGATGTCTTCTTTTAGCGGAGTGATAGAGG GGGGGGGC
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Coding sequence (CDS) from alignment at Contig_97:183068..187925-

>mRNA_14203 ID=mRNA_14203|Name=jgi.p|Trimin1|101142|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=441bp|location=Sequence derived from alignment at Contig_97:183068..187925- (Tribonema minus UTEX_B_3156 )
ATGATGTCCATGAAGCTGTGCGTGGTTCTGCTGGCCCTCCTGGCGTGCGT
GTCCGCATTCGCACCTGTTGGCTCGGGCCGCTCTCTGGCAAGAAGCGCTG
TGGCGACGCGGCGGGCCGTGCGGCAGCTGCGCATGAGCGAGAGCGAGACG
GAGGAGGAGCAGGCAGCGGCCATCGTGGAGGAGGAGGAGGTTGTGGAGGA
CGAGGCGGAGGCGCCGCAGTTCGGACAGAGCGGCTTCTTCCAGCCCAACG
CCAACATGCGGTACGGCGCATCGCGGGACCAGGATGGCAAGTCCAACGTG
TGGGCGATCGAGCCCAAGATGAAGGTGGAGGAGGGCGAGAACAAGGGAGC
GTCGCTCGCCACCGGCGCCATCATCCTGGCGGTCGCCGCCGCGGCTGTTG
TAGCAACGCTCGCCAACCTGCCGTCCCCGGACACCTACTAG
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