mRNA_14023 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Match: A0A835ZBL3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL3_9STRA) HSP 1 Score: 583 bits (1502), Expect = 2.680e-210 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 1 Query: 1 MPPSARFPLTAAPAGHQRRRRPLPLSRLTRRNCGNQCEPAAPPPPPLAQVPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQHDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLAAVERRLPLRVVVGDFLEVTPAEIGTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRPGPPFVVSHAELEALYGPLGFTVELLSSRDASAEYKGGPWDAVSSIVENCYLLTKRGRAAQRRWYKPWSWFRG 873 MPPSARFPLTAAPAGHQRRRRPLPLSRLTRRNCGNQCEPAAPPPPPLAQVPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQHDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLAAVERRLPLRVVVGDFLEVTPAEIGTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRPGPPFVVSHAELEALYGPLGFTVELLSSRDASAEYKGGPWDAVSSIVENCYLLTKRGRAAQRRWYKPWSWFRG Sbjct: 1 MPPSARFPLTAAPAGHQRRRRPLPLSRLTRRNCGNQCEPAAPPPPPLAQVPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQHDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLAAVERRLPLRVVVGDFLEVTPAEIGTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRPGPPFVVSHAELEALYGPLGFTVELLSSRDASAEYKGGPWDAVSSIVENCYLLTKRGRAAQRRWYKPWSWFRG 291
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Match: D7FR49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR49_ECTSI) HSP 1 Score: 177 bits (448), Expect = 6.540e-51 Identity = 95/206 (46.12%), Postives = 124/206 (60.19%), Query Frame = 1 Query: 148 VPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQHDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLAAVERRLPLRVVVGDFLEVTPAEIGTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRPGPPFVVSHAELEALYG-PLGFTVELLSSRDASAEYK 762 VPLCGK+VD+PYLA++GHE VGV+GVEAAVW LQR++WL F P F+PA F R GYVF G GYY D + + R + VVV DFL + P +IG FD WDRG+LVAL P R Y +T ++L G ++LL T +DQ+ + GPP+ + AE++ LYG LG+ +E LSS DA EY+ Sbjct: 17 VPLCGKTVDMPYLAQKGHEVVGVDGVEAAVWQLQRDSWLKFETFQAEPSAESSGRRP-----GFIPAPTFEKRRSGYVFKTDTLGTGYYLDKKAVKWFRDTRKRISVVVSDFLFLAPGDIGMFDRVWDRGALVALRPEDREEYVSTCDSVLEPGGKILLATLVYDQNAKKGPPYSIPLAEVQRLYGGKLGYAIETLSSVDAREEYQ 217
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Match: A0A8J6CB01_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CB01_DIALT) HSP 1 Score: 154 bits (388), Expect = 8.020e-41 Identity = 104/277 (37.55%), Postives = 139/277 (50.18%), Query Frame = 1 Query: 148 VPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQHDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAP---PLLAAVE--------------------------------RRLPLRVVVGDFLEVTPAEIGTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRPGPPFVVSHAELEALYGPLGFTVELLSSRDASAEYK---GGPWDAVSSIVENCYLLTKRGRAAQRRWYKPWSW 864 VPLCGK+VD+P+LA+ GHE VGVEGV A A ++ V G P DF+ ADAF G R GYVFT GY+RD P P AA + +R + + + D+ +V EIG+F AWDRG LVA+PP AR YA+ L ALL ARVLL +DQ V PGPPF ++ ++ AL+ ++V +L+ DASAE++ G PW+ + + E LL KR R W++ W Sbjct: 79 VPLCGKTVDMPFLARAGHEVVGVEGVPLAAEAFSKDQ-PHLRMVRCAPGAPAGAAAPA----DFIAADAFAGPRAGYVFTTRDGKLGYHRDRPQPTPAAAATQPAAAPAQRAALGERADWLSTGGTAAARADQQAQRGTVWLAIADWFDVRRDEIGSFGRAWDRGGLVAVPPAARPAYASALDALLEPRARVLLSCFDYDQQVAPGPPFALAVDDVRALFPR--YSVRVLARTDASAEFRKRVGTPWEKIERMDELALLLVKR-----RPWWRRVLW 343
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Match: A0A813H8E6_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H8E6_POLGL) HSP 1 Score: 138 bits (348), Expect = 2.680e-34 Identity = 93/247 (37.65%), Postives = 131/247 (53.04%), Query Frame = 1 Query: 148 VPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQHDSG-DFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLA----AVERRLPLRVVVGDFLEVTPAEI--------GTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRP-------GPPFVVSHAELEALYGPLGFTVELLSSRDASAEYKGGPWDAVSSIVENCYLLTKRGR 828 VPLCGK+ D+P+L + G+ VGVEGV A+ + E+ + + R + G F P+D F G+R G VF +G G GYYRD P + + A ++ LPL V+ GD +VTP I G FD A+DRGSLVA+PP +R +Y +TL+ L+R G R+LLV +DQ P PPF V+ + AL+ ++VE+L D + P + E YL+ KRGR Sbjct: 146 VPLCGKTFDMPFLCENGYGVVGVEGVPRAIMEFRAEHRMRV-KGFKSRDILSPGEKGSWEKGVSFGPSDQFAGSRFGQVFKKGEQGIGYYRDKPAVWSGKVNAGKKSLPLHVIEGDMFDVTPQMISAATFVKDGRFDLAFDRGSLVAIPPESREQYVSTLSQLIRPGGRILLVALDYDQEKVPYNSKRNAPPPFSVTGEHVRALFPAGAWSVEVLE--DHVEDMSSQPAFKDVKVREVVYLIEKRGR 389
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Match: A0A813LU63_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LU63_POLGL) HSP 1 Score: 130 bits (326), Expect = 3.890e-32 Identity = 84/215 (39.07%), Postives = 118/215 (54.88%), Query Frame = 1 Query: 148 VPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQHDSG-DFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLA----AVERRLPLRVVVGDFLEVTPAEI--------GTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRP-------GPPFVVSHAELEALYGPLGFTVELL 732 VPLCGK+ D+P+L + G+ VGVEGV A+ + E+ + + R + G F P+D F G+R G VF +G G GYYRD P + + A ++ LPL V+ GD +VTP I G FD A+DRGSLVA+PP +R +Y +TL+ L+R G R+LLV +DQ P PPF V+ + AL+ + VE+L Sbjct: 88 VPLCGKTFDMPFLCENGYGVVGVEGVPRAIMEFRAEHRMRV-KGFKSRDILSPGEKGSWEKGVSFGPSDQFAGSRFGQVFKKGEQGIGYYRDKPAVWSGKVNAGKKSLPLHVIEGDMFDVTPQMISAATFVKDGRFDLAFDRGSLVAIPPESREQYVSTLSQLIRPGGRILLVALDYDQEKVPYNSKRNAPPPFSVTGEHVRALFPAGSWCVEVL 301
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Match: A0A812PPH7_9DINO (Tpm protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812PPH7_9DINO) HSP 1 Score: 119 bits (298), Expect = 1.170e-28 Identity = 82/231 (35.50%), Postives = 112/231 (48.48%), Query Frame = 1 Query: 130 PPPLAQVPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQ--HDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLAAV----ERRLPLRVVVGDFLEVTP--------AEIGTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRP-------GPPFVVSHAELEALYGPLGFTVELLSSRDASAEY 759 P P VPLCGKSVD+PYL + G VGVEG+ A+ + E+ + RV + Q + F PA F GAR G F G G GYY + P + R PL ++ GD EVTP A G FD +D +LV+LPP +YAA L++LLR G R+LL+ +DQ P PPF V+ L+ L+ ++V +L + E+ Sbjct: 10 PLPKVLVPLCGKSVDMPYLCELGFGVVGVEGIPRAILEFKAEHQI---RVKGMKSKLPFAKDEQGWREGTTFQPAAQFAGARSGQSFKTGDQGLGYYSERPAVWRGKVNLGRRHAPLHLIEGDMFEVTPELVAASTFATDGRFDLVYDCDALVSLPPDCWKQYAAGLSSLLRVGGRILLIVVQYDQGKLPYARNRINPPPFSVTRENLKGLFPDSSWSVTMLETEPCDEEF 237
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Match: A0A813BSC5_9DINO (Tpm protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813BSC5_9DINO) HSP 1 Score: 116 bits (291), Expect = 1.390e-26 Identity = 79/225 (35.11%), Postives = 112/225 (49.78%), Query Frame = 1 Query: 148 VPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQ--HDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLAAV----ERRLPLRVVVGDFLEVTPAEI--------GTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRP-------GPPFVVSHAELEALYGPLGFTVELLSSRDASAEY 759 VPLCGKSVD+PYL + G VGVEG+ A+ + E+ + RV + Q + F PA F GAR G F G G GYY + P + R +PL ++ GD LEVTP + G FD +D +LV+LPP + +YAA L++LLR G R+LLV +DQ P PPF V+ ++ L+ ++V L + ++ Sbjct: 79 VPLCGKSVDMPYLCELGFGVVGVEGIPRAILEFKAEHQI---RVKGMKSKLPFAKDEQGWREGTTFHPASQFAGARSGQSFKTGDQGLGYYSERPAVWRGKVNLGRRHVPLHLIEGDMLEVTPELVAASTFVTDGRFDLVYDCDALVSLPPDSWKQYAAGLSSLLRVGGRILLVVVQYDQDKLPYARNRINPPPFSVTREHIKGLFPDSCWSVSTLETEPCDEDF 300
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Match: A0A7S2MYV9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2MYV9_9DINO) HSP 1 Score: 111 bits (278), Expect = 5.270e-26 Identity = 72/175 (41.14%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 115 PAAPP----PPPLAQVPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQHDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLAAVERR-----LPLRVVVGDFLEVTPA--------EIGTFDAAWDRGSLVALPPGARARYAATL 588 PA PP P VPLCGKS+D+P+L ++G VGVEGV + L+ E+ + R ++ DF PA+AF G R GYVFT G G GYY D+P + R +P ++ GD +VTP E G FDA +DR SLVA+PP AR YAATL Sbjct: 43 PATPPKADAPTLSVLVPLCGKSIDMPFLCEQGFRVVGVEGVLRPILELRAEH-RQRLKGFKARNVLSHGADGWAETVDFQPAEAFQGRRPGYVFTTGDRGLGYYADSPAVFRGTVRAGNRTTVPFEILQGDMFQVTPELIRVATYEERGQFDAIYDRSSLVAIPPSAREEYAATL 216
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Match: A0A1Q9F2I6_SYMMI (Zeaxanthin epoxidase, chloroplastic n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9F2I6_SYMMI) HSP 1 Score: 117 bits (292), Expect = 1.460e-25 Identity = 81/238 (34.03%), Postives = 116/238 (48.74%), Query Frame = 1 Query: 148 VPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQ--HDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLAAV----ERRLPLRVVVGDFLEVTPAEI--------GTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRP-------GPPFVVSHAELEALYGPLGFTVELLSSRDASAEYKGGPWDAVSSIVE 798 VPLCGKSVD+PYL + G VGVEG+ A+ + E+ + RV + Q + F PA F GAR G F G G GYY + P + R +PL ++ GD LEVTP + G FD +D +LV+LPP +YAA L++LLR G R+LLV +DQ P PPF V+ ++ L+ ++V L + ++ + + S+ E Sbjct: 161 VPLCGKSVDMPYLCELGFGVVGVEGIPRAILEFKAEHQI---RVKGMKSKLPFAKDEQGWREGTTFHPASQFAGARSGQSFKTGDQGLGYYSERPAVWRGKVNLGRRHVPLHLIEGDMLEVTPELVAASTFVTDGRFDLVYDCDALVSLPPDCWKQYAAGLSSLLRVGGRILLVVVQYDQDKLPYARNRINPPPFSVTREHIKGLFPDSRWSVSTLETEPCDEDFARYLENRLRSLTE 395
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Match: A0A7S1PN57_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1PN57_ALECA) HSP 1 Score: 110 bits (274), Expect = 6.280e-25 Identity = 92/239 (38.49%), Postives = 116/239 (48.54%), Query Frame = 1 Query: 136 PLAQVPLCGKSVDLPYLAKRGHETVGVEGVEAAVWALQRENWLDFTRVLVPRGGXXXXXPPQHDSGDFLPADAFGGARKGYVFTRGAHGQGYYRDAPPLLAAVERRLPLRVVVGDFLEVTPAE---IGTFDAAWDRGSLVALPPGARARYAATLAALLRDGARVLLVTSHFDQSVRP--GPPFVVSHAELEALYGPLGFTVELLSSRDASAEYKGGPWDAVSSIVENCYLLTKR-GRAA 834 P PLCGK+VD+P+LA +G+ VGVEG+E A+ A E+ T LVP P ++ S L G+G AP L V GDFL + AE + FDAA+DRG LVA+ PG R RYA LAALLR G R+LLVT D GPPF V+ E+ AL+ F V LL D A +G + E YLLT++ GR+A Sbjct: 60 PRVLFPLCGKTVDMPFLASQGYRVVGVEGIEDALRAFAAEH--GATGQLVPVALPKELDPERYRSYAVLLKP----------------GEGKPMPAPVLF-----------VRGDFLALGSAEAEALVPFDAAFDRGGLVAVQPGDRPRYAQALAALLRPGGRLLLVTVEHDPFANGNLGPPFEVTEKEVSALFAG-DFEVRLLKREDRYAVDEGMRARGCTRFFECGYLLTRKDGRSA 268 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|176112 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_14023 ID=mRNA_14023|Name=jgi.p|Trimin1|176112|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=876bp|location=Sequence derived from alignment at Contig_133:82458..83748- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCCCCCAAGCGCTCGCTTTCCACTCACGGCCGCGCCCGCCGGACACCAback to top protein sequence of jgi.p|Trimin1|176112 >Trimin1|176112|e_gw1.133.64.1 ID=Trimin1|176112|e_gw1.133.64.1|Name=jgi.p|Trimin1|176112|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=292bp MPPSARFPLTAAPAGHQRRRRPLPLSRLTRRNCGNQCEPAAPPPPPLAQVback to top mRNA from alignment at Contig_133:82458..83748- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_14023 ID=mRNA_14023|Name=jgi.p|Trimin1|176112|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1291bp|location=Sequence derived from alignment at Contig_133:82458..83748- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_133:82458..83748- >mRNA_14023 ID=mRNA_14023|Name=jgi.p|Trimin1|176112|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=876bp|location=Sequence derived from alignment at Contig_133:82458..83748- (Tribonema minus UTEX_B_3156 )back to top |