mRNA_13902 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352509
Unique NamemRNA_13902
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|352509 vs. uniprot
Match: A0A835ZEQ1_9STRA (HMG box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ1_9STRA)

HSP 1 Score: 1434 bits (3712), Expect = 0.000e+0
Identity = 919/919 (100.00%), Postives = 919/919 (100.00%), Query Frame = 1 
Query:    1 MEHEADSARPGAKRSAEGGSXXXXXXXXXXXXXXXXXXXXXHQGENQHKGSGAKPQGIGNLRTEAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRFGVAFPPALCWDGQGDAPPAYWRKHARHDSNGGXXXXXXXXXXXXSXXXQDGAVGXXXXXXXXXXXXXXXGCKVDGCSAXXXXXXXXXXXXXXXXXXXXXXXXXXGQSALSIDTEEVEVCAPVRVVSYRASTYACGGGGADXXXXXGKSAVTRVRALRYDAASDTTLVACAPREGRTHQLRLHLRWLGHPIANDPCYGGALFCADAAGRARAEAARAWLRRRGCPCPADTGAEPEEEAADGGGGVRGGTDAXXXXXXXXXXXXXXXXXTDTSGGSADVHGDSAGADAAEARLLQVLRAGYREGESEESFVRRTCRHCFGRSAPAGSTGGATTEAAAMQASAQSXXXTKDVXXXXXTAHDESMTKRSAGEDAAAEXXXXXXXXXXXALPTAVLPDSPRAAAGVPLPLVAAAVSGAPPVDAAADECXXXXXXXXXXXXXXXXXXXXXXXXMEMSMQALTRSPGIWLHALRYSDEGWSYETAPPKWATETGWGGVEPQEVKQEALRPPRKGNGGNAGSCGFEEEFKLLKKKQAPSAAPAAPQAKPKPANAMAPQDGDRVEKAMKFVIHKKTKPPAEPRPPTNGFFKYAELMRPIITKICDDASDPDVKVNQTQVSKIASLMWKELTEDQKRAYKAVAKADWDVKQAKAAAK 2757
            MEHEADSARPGAKRSAEGGSXXXXXXXXXXXXXXXXXXXXXHQGENQHKGSGAKPQGIGNLRTEAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRFGVAFPPALCWDGQGDAPPAYWRKHARHDSNGGXXXXXXXXXXXXSXXXQDGAVGXXXXXXXXXXXXXXXGCKVDGCSAXXXXXXXXXXXXXXXXXXXXXXXXXXGQSALSIDTEEVEVCAPVRVVSYRASTYACGGGGADXXXXXGKSAVTRVRALRYDAASDTTLVACAPREGRTHQLRLHLRWLGHPIANDPCYGGALFCADAAGRARAEAARAWLRRRGCPCPADTGAEPEEEAADGGGGVRGGTDAXXXXXXXXXXXXXXXXXTDTSGGSADVHGDSAGADAAEARLLQVLRAGYREGESEESFVRRTCRHCFGRSAPAGSTGGATTEAAAMQASAQSXXXTKDVXXXXXTAHDESMTKRSAGEDAAAEXXXXXXXXXXXALPTAVLPDSPRAAAGVPLPLVAAAVSGAPPVDAAADECXXXXXXXXXXXXXXXXXXXXXXXXMEMSMQALTRSPGIWLHALRYSDEGWSYETAPPKWATETGWGGVEPQEVKQEALRPPRKGNGGNAGSCGFEEEFKLLKKKQAPSAAPAAPQAKPKPANAMAPQDGDRVEKAMKFVIHKKTKPPAEPRPPTNGFFKYAELMRPIITKICDDASDPDVKVNQTQVSKIASLMWKELTEDQKRAYKAVAKADWDVKQAKAAAK
Sbjct:    1 MEHEADSARPGAKRSAEGGSXXXXXXXXXXXXXXXXXXXXXHQGENQHKGSGAKPQGIGNLRTEAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRFGVAFPPALCWDGQGDAPPAYWRKHARHDSNGGXXXXXXXXXXXXSXXXQDGAVGXXXXXXXXXXXXXXXGCKVDGCSAXXXXXXXXXXXXXXXXXXXXXXXXXXGQSALSIDTEEVEVCAPVRVVSYRASTYACGGGGADXXXXXGKSAVTRVRALRYDAASDTTLVACAPREGRTHQLRLHLRWLGHPIANDPCYGGALFCADAAGRARAEAARAWLRRRGCPCPADTGAEPEEEAADGGGGVRGGTDAXXXXXXXXXXXXXXXXXTDTSGGSADVHGDSAGADAAEARLLQVLRAGYREGESEESFVRRTCRHCFGRSAPAGSTGGATTEAAAMQASAQSXXXTKDVXXXXXTAHDESMTKRSAGEDAAAEXXXXXXXXXXXALPTAVLPDSPRAAAGVPLPLVAAAVSGAPPVDAAADECXXXXXXXXXXXXXXXXXXXXXXXXMEMSMQALTRSPGIWLHALRYSDEGWSYETAPPKWATETGWGGVEPQEVKQEALRPPRKGNGGNAGSCGFEEEFKLLKKKQAPSAAPAAPQAKPKPANAMAPQDGDRVEKAMKFVIHKKTKPPAEPRPPTNGFFKYAELMRPIITKICDDASDPDVKVNQTQVSKIASLMWKELTEDQKRAYKAVAKADWDVKQAKAAAK 919
[Close]
BLAST of jgi.p|Trimin1|352509 vs. uniprot
Match: D8LB48_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB48_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 1.550e-63
Identity = 184/465 (39.57%), Postives = 241/465 (51.83%), Query Frame = 1 
Query:  127 QGENQHKGSGAKPQGIGNLRTEAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRFGVAFPPALCWDGQGDAPPAYWRKHARHDSNGGXXXXXXXXXXXXSXXXQDGAVGXXXXXXXXXXXXXXXGCKV---------------------DGCSAXXXXXXXXXXXXXXXXXXXXXXXXXXGQSALSIDTE--EVEVCAPVRVVSYRASTYACGGGGADXXXXXGKSAVTRVRALRYDAASDTTLVACAPREGRTHQLRLHLRWLGHPIANDPCYGGALFCADAAGRARAE 1452
            +G+   KG   + +    L   A+  +YY DD+G R+V PY+++FQT AK+RWL R+V DV++AEF  E R                    ++Y  AV GG +TVNG  V  DY ++  DL+ ++ HRHE P  GG + +V+E+ E LV +KP  +P+HPCG+YR+NTL  ++  QRP L  L +CHRLDRLTSG+ I AK+A++A  +  ++ S   +KTYLARV G FG   P     D +    P+             XXXXXXXXXXXX XXX      XXXXXXXXXXXXXXX                         +G                             G      + E   V V  P+RV+  +   Y C           GK A T VR + YD ASDT++V C P  GRTHQ+RLHL+W GHPIANDPCYGG L   +   + RAE
Sbjct:   56 RGKRPRKGDAKRERKKKALAHAAEKCEYYVDDHGLRRVRPYIYDFQTHAKERWLGRTVVDVFSAEFGGEAR--------------------SHYENAVRGGLLTVNGNKVGVDYELQNSDLICNKTHRHEPPVCGGDIPIVSESAEELVVDKPCTVPIHPCGSYRFNTLFYIMHRQRPDLT-LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLP----LDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGRLRSSGAISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYEC--------HPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAE 487
[Close]
BLAST of jgi.p|Trimin1|352509 vs. uniprot
Match: A0A329RSN8_9STRA (PseudoU_synth_2 domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329RSN8_9STRA)

HSP 1 Score: 216 bits (549), Expect = 6.240e-58
Identity = 152/442 (34.39%), Postives = 206/442 (46.61%), Query Frame = 1 
Query:  133 ENQHKGSGAKPQGIGNLRTEAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRFGVAFPPALCWDGQGDAPPAYWRKHARHDSNGGXXXXXXXXXXXXSXXXQDGAVGXXXXXXXXXXXXXXXGCKVDGCSAXXXXXXXXXXXXXXXXXXXXXXXXXXGQSALSIDTEEVEVCAPVRVVSYRASTYACGGGGADXXXXXGKSAVTRVRALRYDAASDTTLVACAPREGRTHQLRLHLRWLGHPIANDPCYGGALFCADAAGRARAEAA 1458
            E Q K   +K       R +A+A KY +  NG+R V PYV+EF+T+AK RW  R + +++T EF A +                      YY  A+A GRI+VN  IVP D  ++ GDL+ H  HRHE P +G  V VV E D+++V +KP  +P HPCGAYR+N+L  ++   RP LPQL+I HRLDRLTSG+++LAK++ KA A+ + +    A KTYLARV+G+F    P  L                                    +   QD  V                    + C A                                 D   + +  P+R +S R   + C           GK + T VR +R D    T+L+ C P  GRTHQ+RLHLR +G PIANDPCYGG L   ++A RA   AA
Sbjct:   45 ERQAKKRKSKQDAKSAKRFQAEAPKY-SFANGYRMVEPYVYEFRTYAKARWFDRELLEIFTKEFGANS--------------------PEYYKFAIASGRISVNHKIVPADTIIKNGDLIIHAAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATRPDLPQLNIVHRLDRLTSGVMLLAKNSAKAKALSSIIADRQASKTYLARVRGQF----PDLL------------------------------------NSEIQDKLVNQAK----------------ENCPASIITFP---------------------------DEGAILISCPLRCLSARDGVWEC--------HEEGKPSETLVRLVRTDKC--TSLMKCKPVTGRTHQIRLHLRLIGFPIANDPCYGGELHFGESAERAEEIAA 372
[Close]
BLAST of jgi.p|Trimin1|352509 vs. uniprot
Match: A0A485KXJ1_9STRA (Aste57867_13100 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXJ1_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.280e-49
Identity = 101/231 (43.72%), Postives = 134/231 (58.01%), Query Frame = 1 
Query:  157 AKPQGIGNLRTEAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRFGVAFPPALCWD 849
            AK + +     +   V  Y   +G+R V PYV +FQT AK RW  R++ D++T EF + T                     AYY  A+  GRIT+NG +V     V+ GDLL H+ HRHE P +G  +++  ET  +LV NKPAG+P HPCGAYR+N+L  +L H RP +P LHI HRLDRLTSG+VILAK++ KA  +   +   +A KTYLARV G F  A   +   D
Sbjct:    7 AKRRKVSAKEVDEDPVAEYEVRDGYRYVKPYVFKFQTHAKQRWFGRTLIDIFTTEFGSFT--------------------PAYYELAIQTGRITLNGKMVSPTTTVKNGDLLCHKTHRHEPPVSGEEIQIAHETPNLLVVNKPAGIPTHPCGAYRFNSLHHILLHMRPDIPHLHIVHRLDRLTSGVVILAKNSTKARDLSTTIADRTASKTYLARVLGMFPAALTDSWLTD 217
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BLAST of jgi.p|Trimin1|352509 vs. uniprot
Match: W4GUU9_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GUU9_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.510e-49
Identity = 99/220 (45.00%), Postives = 136/220 (61.82%), Query Frame = 1 
Query:  157 AKPQGIGNLRTEAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRF 816
            AK + + +   E  A +Y   D G+R V PYV  F+T AK RW  R++ +++T EF + +                      YYA A+  GRIT+NG + P    V+ GDLL H+ HRHE P +G  +E+  ET ++LV +KPAG+P HPCGAYR+N+L  +L H RP +P+LH+ HRLDRLTSG+VILAK+  KA A+ A +   +A KTYLARV+G F
Sbjct:   15 AKRRKVASHANEVLATEYEVRD-GYRYVKPYVFAFETHAKQRWFGRTLLEIFTTEFGSFS--------------------PEYYALAIDTGRITLNGKLTPPTTVVKNGDLLCHKTHRHEPPVSGDTIEIAHETPDLLVVSKPAGVPTHPCGAYRFNSLHFILLHMRPDIPKLHVVHRLDRLTSGVVILAKTPSKARALSASIADRTASKTYLARVRGSF 213
[Close]
BLAST of jgi.p|Trimin1|352509 vs. uniprot
Match: G4YVW7_PHYSP (PseudoU_synth_2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YVW7_PHYSP)

HSP 1 Score: 190 bits (483), Expect = 3.340e-49
Identity = 101/217 (46.54%), Postives = 137/217 (63.13%), Query Frame = 1 
Query:  190 EAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRFGVAFPPAL 840
            +A+A KY +  NG+R V PYV+EF+TFAK RW  R + +++T EF A +                      YY  A+A GRI+VN  IVP D  ++ GDL+ H  HRHE P +G  V VV E D+++V +KP  +P HPCGAYR+N+L  ++   RP LPQL+I HRLDRLTSG+V+LAK+A KA A+ A + +  A K YLARV+G+F     PA+
Sbjct:   37 QAEAPKY-SFANGYRMVEPYVYEFRTFAKARWFDRQLLEIFTKEFGANS--------------------PEYYKFAIASGRISVNHKIVPADTVIKNGDLIIHTAHRHEPPVSGEEVSVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHSIVQATRPDLPQLNIVHRLDRLTSGVVLLAKNAAKAKALSAIIANRQASKMYLARVRGQFPDLLDPAV 232
[Close]
BLAST of jgi.p|Trimin1|352509 vs. uniprot
Match: A0A2P4WXF4_9STRA (RNA pseudouridylate synthase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXF4_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.030e-48
Identity = 104/228 (45.61%), Postives = 140/228 (61.40%), Query Frame = 1 
Query:  133 ENQHKGSGAKPQGIGNLRTEAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRF 816
            E Q K   +K       R +A+A KY +  NG+R V PYV+EF+TFAK RW  R + +++T EF A +                      YY  A+A GRI+VN  IVP D  ++ GDL+ H  HRHE P +G  V VV E D+++V +KP  +P HPCGAYR+N+L  ++   RP LPQL+I HRLDRLTSG+V+LAK+A KA A+ + +    A KTYLARV+G+F
Sbjct:   40 ERQAKKRKSKRDAKNANRFQAEAPKY-SFANGYRMVEPYVYEFRTFAKARWFDRELLEIFTKEFGANS--------------------PEYYEFAIASGRISVNHKIVPADTIIKNGDLIIHTAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATRPDLPQLNIVHRLDRLTSGVVLLAKNATKAKALSSIIADRQASKTYLARVRGQF 246
[Close]
BLAST of jgi.p|Trimin1|352509 vs. uniprot
Match: A0A6H5KK40_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK40_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 1.240e-48
Identity = 98/235 (41.70%), Postives = 140/235 (59.57%), Query Frame = 1 
Query:  127 QGENQHKGSGAKPQGIGNLRTEAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRFGVAFP 831
            +G+   KG   + +    L   ++  +YY D +G R+V PY++ FQT AK+RWL R+V DV++AEF  E R                    ++Y  A+ GG +TVNG  V  DY ++  DL+ +R HRHE P  GG + +V E+ E LV +KP  +P+HPCG+YR+NTL  ++  QRP L  L +CHRLDRLTSG+ I AK+A++A  +  ++     +KTYLARV G FG   P
Sbjct:   36 RGKRPRKGDAKRERKKKALAHASEKCEYYVDGHGLRRVRPYIYNFQTHAKERWLGRTVVDVFSAEFGGEPR--------------------SHYENAIRGGLLTVNGNKVGVDYELQNSDLICNRTHRHEPPVCGGDIPIVFESAEELVVDKPCTVPIHPCGSYRFNTLFYIMHRQRPDLT-LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGLGRTRKTYLARVSGDFGQRLP 249
[Close]
BLAST of jgi.p|Trimin1|352509 vs. uniprot
Match: A0A6G0XGG3_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGG3_9STRA)

HSP 1 Score: 186 bits (473), Expect = 4.240e-48
Identity = 94/202 (46.53%), Postives = 128/202 (63.37%), Query Frame = 1 
Query:  211 YTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRF 816
            Y   +G+R V PYV +FQT+AK+RW  R+V +++T EF + +                      YYA A+  GR+T+NGA       V+ GDLL H+ HRHE P +G  +E+  ET ++LV +KPAG+P HPCGAYR+N+L  +L H RP +P LHI HRLDRLTSG+VILAK++  A  + A +   +A KTYLARV+G F
Sbjct:   24 YEVRDGYRYVKPYVFKFQTYAKERWFGRTVINIFTTEFGSFS--------------------PEYYALAIETGRVTLNGARTTATTVVKNGDLLCHKTHRHEPPVSGETIEIAHETPDLLVVSKPAGIPTHPCGAYRFNSLHYILLHMRPNIPHLHIVHRLDRLTSGVVILAKNSNTARKLSACIADRTASKTYLARVRGTF 205
[Close]
BLAST of jgi.p|Trimin1|352509 vs. uniprot
Match: A0A024UVZ1_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVZ1_9STRA)

HSP 1 Score: 187 bits (474), Expect = 6.000e-48
Identity = 96/204 (47.06%), Postives = 127/204 (62.25%), Query Frame = 1 
Query:  211 YTDDNGFRQVPPYVHEFQTFAKDRWLRRSVDDVYTAEFAAETRLXXXXXXXXXXXXXXXXXXSAYYAAAVAGGRITVNGAIVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPVHPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAAVCARVRSASAQKTYLARVKGRFGV 822
            Y    G+R V PYV  FQT AK RW  R++ +++TAEF + +                      YYA A+  GRIT+NG +VP    V+ GDLL H+ HRHE P +G  +++  ET ++LV NKPAG+P HPCGAYR+N+L  +L H RP +P+LHI HRLDRLTSG+VILAK+   A  +   +   +A KTYLARV+G F V
Sbjct:   29 YVVREGYRYVNPYVFGFQTHAKQRWFGRTLLEIFTAEFGSFS--------------------PEYYALAIESGRITLNGNLVPPTTVVKNGDLLCHKTHRHEPPVSGDDIQIAHETVDLLVVNKPAGVPTHPCGAYRFNSLHYILMHMRPDIPKLHIVHRLDRLTSGVVILAKNPSTARTLSTCIADRTASKTYLARVRGAFPV 212
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352509 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEQ1_9STRA0.000e+0100.00HMG box domain-containing protein n=1 Tax=Tribonem... [more]
D8LB48_ECTSI1.550e-6339.57Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A329RSN8_9STRA6.240e-5834.39PseudoU_synth_2 domain-containing protein n=9 Tax=... [more]
A0A485KXJ1_9STRA1.280e-4943.72Aste57867_13100 protein n=1 Tax=Aphanomyces stella... [more]
W4GUU9_9STRA1.510e-4945.00PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
G4YVW7_PHYSP3.340e-4946.54PseudoU_synth_2 domain-containing protein n=4 Tax=... [more]
A0A2P4WXF4_9STRA1.030e-4845.61RNA pseudouridylate synthase n=1 Tax=Phytophthora ... [more]
A0A6H5KK40_9PHAE1.240e-4841.70PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A6G0XGG3_9STRA4.240e-4846.53PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A024UVZ1_9STRA6.000e-4847.06PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_122contigContig_122:53021..60004 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352509|estExt_Genemark1.C_Ctg_1220009
BRITEko00000,ko01000,ko03016
KEGG koko:K15454
EC5.4.99.28
GOsGO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360
Descriptionpseudouridine synthase activity
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0564@1|root,KOG1919@2759|Eukaryota
Evalue2.54e-64
Seed ortholog2880.D8LB48
Hectar predicted targeting categoryother localisation
TranscriptId352831
TrackFilteredModels1
ProteinId352509
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352509gene_13902Tribonema minus UTEX_B_3156 geneContig_122 53021..60004 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352509Trimin1|352509|estExt_Genemark1.C_Ctg_1220009Tribonema minus UTEX_B_3156 polypeptideContig_122 53021..60004 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13902_1exon_13902_1Tribonema minus UTEX_B_3156 exonContig_122 53021..53301 +
exon_13902_2exon_13902_2Tribonema minus UTEX_B_3156 exonContig_122 54829..54888 +
exon_13902_3exon_13902_3Tribonema minus UTEX_B_3156 exonContig_122 55158..55514 +
exon_13902_4exon_13902_4Tribonema minus UTEX_B_3156 exonContig_122 55820..57415 +
exon_13902_5exon_13902_5Tribonema minus UTEX_B_3156 exonContig_122 58127..58208 +
exon_13902_6exon_13902_6Tribonema minus UTEX_B_3156 exonContig_122 58476..58607 +
exon_13902_7exon_13902_7Tribonema minus UTEX_B_3156 exonContig_122 59139..59241 +
exon_13902_8exon_13902_8Tribonema minus UTEX_B_3156 exonContig_122 59856..60004 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13902CDS_13902Tribonema minus UTEX_B_3156 CDSContig_122 53021..53301 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13902 ID=mRNA_13902|Name=jgi.p|Trimin1|352509|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2760bp|location=Sequence derived from alignment at Contig_122:53021..60004+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCATGAAGCGGATTCTGCGCGGCCAGGGGCCAAACGGAGCGCTGA
GGGCGGCTCGGAGAAGAAAGCGCAGCAACAGGCGGCCAAGAGGTTGCGGA
GGCAGGAGAAGCAGAAGCGTAAGCACCAAGGCGAGAACCAGCACAAAGGC
TCTGGTGCCAAGCCCCAGGGCATTGGCAATCTCAGGACCGAGGCTCAAGC
TGTGAAGTACTACACCGATGATAATGGATTTCGACAGGTGCCACCCTATG
TGCACGAGTTCCAGACTTTTGCCAAGGACAGGTGGCTCCGACGCAGCGTC
GATGACGTCTACACGGCGGAGTTCGCCGCGGAGACGCGCTTGTGGCTCGG
GCGCAGCGTTGAGGACGTCTACACGGCGGAGTTCGCCGCGGAGACGAGCG
CGTACTACGCTGCCGCCGTCGCCGGCGGCCGCATCACCGTTAACGGCGCC
ATCGTCCCCCGCGACTACAGAGTCGAAGCGGGCGACCTGCTGTCGCACAG
GGTGCACCGCCACGAGCTGCCGGCGGCGGGAGGCGCAGTTGAAGTTGTGG
CGGAGACGGACGAGGTCCTGGTGGCGAACAAGCCCGCGGGGCTGCCCGTG
CACCCGTGCGGCGCGTACCGCTACAACACGCTCGTGTGTGTGCTCGCGCA
CCAGCGCCCCGCGCTGCCGCAGCTGCACATCTGCCACCGGCTCGACAGGC
TGACGTCGGGCATCGTGATCCTGGCCAAGAGCGCGCAGAAGGCGGCCGCC
GTGTGCGCGCGCGTGCGCAGCGCCAGCGCTCAGAAAACGTACCTGGCGCG
TGTCAAGGGGCGCTTCGGCGTCGCCTTCCCCCCCGCCCTCTGTTGGGATG
GGCAAGGGGACGCTCCGCCCGCGTACTGGCGAAAACACGCACGCCACGAC
AGCAACGGCGGCGGCGGCGGTGACGGCAGTGGCGATGGCAGTGGCAGCAG
TGGCGGCGGTCAGGATGGCGCGGTAGGGAGTAGTAGCACAGGCGCCGGCG
GCGGCGACAGCAGCAATGGCAACGGCTGCAAGGTTGATGGCTGCAGCGCC
AATGCCGGTGGCGGCGGCGACGGCCGCAGCAGCGGAGCAGGCGCCCCTGC
GGGCGACAGCAGCGGCGGCGGCGGCAGCGGCCAAAGCGCGCTGAGCATCG
ACACGGAGGAGGTGGAGGTGTGCGCGCCGGTGCGCGTGGTCTCGTACCGC
GCGTCGACGTACGCGTGCGGCGGCGGCGGCGCGGACGGCGGCGCCGGCGG
CGGCAAGTCGGCGGTCACGCGCGTGCGCGCGCTGCGCTACGACGCCGCGT
CCGACACGACGCTCGTCGCGTGCGCGCCGCGCGAGGGGCGCACGCACCAG
CTGCGCCTGCACCTGCGCTGGCTCGGCCACCCCATCGCCAACGACCCGTG
CTACGGCGGCGCGCTGTTCTGCGCCGACGCCGCGGGGCGCGCGCGCGCGG
AGGCAGCGCGCGCGTGGCTGCGGCGCCGCGGCTGCCCCTGTCCGGCCGAC
ACCGGCGCCGAGCCGGAGGAGGAGGCGGCGGATGGCGGCGGCGGTGTCCG
CGGCGGCACTGATGCTGGTAGCGGCGGCGGCGGCGACGCCGGTGCTGCCA
GCAACGGGAGCGGCGAAACTGACACCTCTGGCGGCAGTGCTGACGTTCAT
GGAGACAGCGCCGGCGCCGATGCTGCGGAAGCGCGCCTGCTGCAGGTGCT
GCGCGCGGGGTACAGGGAGGGGGAGAGCGAGGAGTCGTTCGTGCGCCGCA
CGTGCCGCCACTGCTTCGGCCGCAGCGCGCCCGCCGGCAGCACTGGCGGC
GCGACAACAGAGGCAGCGGCGATGCAAGCGAGCGCGCAATCCGGCGCGTC
CACAAAGGATGTTGCAGCGGCGGCGACAACGGCGCATGATGAATCGATGA
CAAAACGCAGCGCAGGTGAGGATGCCGCGGCAGAAGCGCAAGCCGGCGGC
GGCAGCGGCAGCGCGGCGGCGCTGCCGACGGCGGTACTGCCGGACAGCCC
GCGTGCCGCGGCGGGCGTGCCGCTGCCGCTTGTGGCGGCGGCTGTCAGCG
GCGCGCCGCCCGTAGATGCTGCTGCTGATGAGTGTGAGTGCAGCAGCGGC
AGCGGCAGCGGCGGCAGCAGCAGCGGCGGCGGCGTCGACAAGGACTTCGA
TTACGCGATGGAGATGTCGATGCAGGCGCTGACGCGGTCGCCGGGGATCT
GGCTGCACGCGCTGCGCTACAGCGACGAGGGGTGGAGCTACGAGACGGCG
CCGCCGAAGTGGGCCACGGAGACGGGATGGGGGGGTGTAGAGCCGCAGGA
AGTGAAGCAGGAGGCACTGCGGCCCCCTCGGAAAGGCAACGGCGGCAACG
CGGGGTCCTGTGGTTTCGAGGAGGAGTTCAAGCTGCTGAAGAAGAAGCAG
GCTCCAAGCGCAGCACCTGCTGCACCGCAAGCCAAGCCCAAGCCCGCAAA
CGCAATGGCTCCCCAAGACGGAGACAGGGTGGAGAAGGCGATGAAATTTG
TCATCCACAAGAAAACCAAGCCTCCGGCTGAGCCGCGGCCCCCCACCAAT
GGCTTCTTTAAGTATGCGGAGCTCATGCGCCCCATCATCACCAAGATCTG
CGATGACGCCAGTGACCCCGACGTCAAGGTCAACCAGACACAGGTGTCCA
AGATTGCATCCCTCATGTGGAAAGAGTTGACCGAGGACCAGAAACGGGCC
TACAAGGCGGTTGCCAAGGCTGACTGGGATGTCAAGCAGGCCAAGGCAGC
CGCCAAGTGA
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protein sequence of jgi.p|Trimin1|352509

>Trimin1|352509|estExt_Genemark1.C_Ctg_1220009 ID=Trimin1|352509|estExt_Genemark1.C_Ctg_1220009|Name=jgi.p|Trimin1|352509|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=920bp
MEHEADSARPGAKRSAEGGSEKKAQQQAAKRLRRQEKQKRKHQGENQHKG
SGAKPQGIGNLRTEAQAVKYYTDDNGFRQVPPYVHEFQTFAKDRWLRRSV
DDVYTAEFAAETRLWLGRSVEDVYTAEFAAETSAYYAAAVAGGRITVNGA
IVPRDYRVEAGDLLSHRVHRHELPAAGGAVEVVAETDEVLVANKPAGLPV
HPCGAYRYNTLVCVLAHQRPALPQLHICHRLDRLTSGIVILAKSAQKAAA
VCARVRSASAQKTYLARVKGRFGVAFPPALCWDGQGDAPPAYWRKHARHD
SNGGGGGDGSGDGSGSSGGGQDGAVGSSSTGAGGGDSSNGNGCKVDGCSA
NAGGGGDGRSSGAGAPAGDSSGGGGSGQSALSIDTEEVEVCAPVRVVSYR
ASTYACGGGGADGGAGGGKSAVTRVRALRYDAASDTTLVACAPREGRTHQ
LRLHLRWLGHPIANDPCYGGALFCADAAGRARAEAARAWLRRRGCPCPAD
TGAEPEEEAADGGGGVRGGTDAGSGGGGDAGAASNGSGETDTSGGSADVH
GDSAGADAAEARLLQVLRAGYREGESEESFVRRTCRHCFGRSAPAGSTGG
ATTEAAAMQASAQSGASTKDVAAAATTAHDESMTKRSAGEDAAAEAQAGG
GSGSAAALPTAVLPDSPRAAAGVPLPLVAAAVSGAPPVDAAADECECSSG
SGSGGSSSGGGVDKDFDYAMEMSMQALTRSPGIWLHALRYSDEGWSYETA
PPKWATETGWGGVEPQEVKQEALRPPRKGNGGNAGSCGFEEEFKLLKKKQ
APSAAPAAPQAKPKPANAMAPQDGDRVEKAMKFVIHKKTKPPAEPRPPTN
GFFKYAELMRPIITKICDDASDPDVKVNQTQVSKIASLMWKELTEDQKRA
YKAVAKADWDVKQAKAAAK*
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mRNA from alignment at Contig_122:53021..60004+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13902 ID=mRNA_13902|Name=jgi.p|Trimin1|352509|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6984bp|location=Sequence derived from alignment at Contig_122:53021..60004+ (Tribonema minus UTEX_B_3156 )
ATGGAGCATGAAGCGGATTCTGCGCGGCCAGGGGCCAAACGGAGCGCTGA
GGGCGGCTCGGAGAAGAAAGCGCAGCAACAGGCGGCCAAGAGGTTGCGGA
GGCAGGAGAAGCAGAAGCGTAAGCACCAAGGCGAGAACCAGCACAAAGGC
TCTGGTGCCAAGCCCCAGGGCATTGGCAATCTCAGGACCGAGGCTCAAGC
TGTGAAGTACTACACCGATGATAATGGATTTCGACAGGTGCCACCCTATG
TGCACGAGTTCCAGACTTTTGCCAAGGACAGGTGAGCACCACGTGATAGC
AGTCTCAAGTACCTCCTGTACAGCAATGATACTGCACACATCCTGGGAAG
TTTGCAAGCACTGGGCGTGCTTCTAAAATGCGCTCTGCCTAGGATCAGGT
TTGTACATACATGATGTGTTGAACAGGGCCTCTATGGCCAGCAGAACTGC
GCTATGCAAGCAGCAGTACACCACACACCACCAGATCCATGCAAGAGTGA
TCCATTCATGCGTGAACAGGAAAGCAGTGACACTCCATCTTCACTGCTCC
TAACCCTTACCCTAGGGCAACAGGCAATGCTACCACAGATGCCTCTTGGT
TAAAGCATTTCGACCAGCCTGTGCTAGGTTGAAGTTGCAGGGGCATCACC
CACAGGGCTTCCGCCTCTTGCACGGTTTCTGCGGGCGCATGTTATCAGGC
CTGCAGCTGCCCGCACTATTTTCACGCAGAGTCAATGGAGATGGCGAAGG
CATACACGCACAGACTGCGGCACAGTTTAAGGTGAGGACAGAGCCCTCAC
GAAGCCCAGATACACATGCGCTACAGGGCTGCGCTGCCAGCTGAGCATGG
CAGACAGAGACCACAAAACGCTGGCGGCAAATGAAGAGCAGCGCTGCTAC
TGGTACCGCAACCATCCGCCCGCTGTCGCAGGCGGCCGGAGATGAGTGGT
GTTTGACGTTGATCTGCACCAGCACTTGCTGGTGCGCCCCTGTTGCTACT
AAGCCTGCAGTCGTGTTCCAGCGCACATGGCGAGTGCGTAGAGCAATGAA
GCGCCCGTCAAATGTCCTCGCAGCACCGCGCGCTCTTGCTGGTGGCTTGG
GCAGAGTGTTTTGTGGGCATGCAGACGCGCTCAGATGGAAGGTGCGCGCG
ATGCACTGCACTGCCGCCGCCCGTCGTCACCAGCAGCGTCACCTTTAAAA
CACAGCGCTCAGCGGTGTAGGGTGCGCCGCCGCCCATCGCTGTCGCCGTC
ACGGTGCTCCATACCTCCTCCGCACTTGCAGTTCCGATGTGACTTGCGCT
TGCGGTTGTGCTTGTGCTTACGGAAGCTGCACACGTGGACTTGCCCTTGA
ACTGATGCTTGCGCTTGGACTTATGCTTGCACCCGCACTCGTGCTCGCTC
ATAGCTTGGGGAGCAGTGAAACTGACATCTGCACGGCGGAGTTTGCCGCA
GAGACGCGTGCGTACACCACGCTGCTGCCGTTGTTGTTCACTCCACGTTG
CTTTGCAGGCAAATTGCAGCCCTACTTCCACTTGAACTCACACTTCAGCT
TCTTCAACTTGCATCTGGACTCAAAATCGGCCTCAGATGGCTCGGGCGCA
GCATTGAGGACGTCAACACGGCAGAGTTCGCCGCAATGGCACGCGCGTAT
GACGCAGCCGCTGTCGCTCGTTGTGCTTTGAACCTGATGCACACGTACAA
TTAAAACTCAAACAAAATAATCACTTCACATGCTCTAATTTATTTTTAGA
AATGAATACTTGTACTGCACACCCTACTTAGATGAATAATTGTGTTCGCA
CACGTCAGGTGGCTCCGACGCAGCGTCGATGACGTCTACACGGCGGAGTT
CGCCGCGGAGACGCGCTTGTACTACGCCGCTTCCGTTGTTTTTTGCACCT
CGGCATTTGAAACACACTTGCACTTGTACACTTGAACTCACACTTTCCAC
TTGAATGTGAGCTATGAAACCCTCAGGTGGCTCGGGCGCAGTGTCGAGGA
GGTCTACACGGCAACGTTTGCCGCAGAAACGCGCGTGTACTGCGCCGCCG
CCATTCTTATTTTCACTCTGGCATTTGAACACACTTGCGCTTGTACGCTT
GAACTCACACTTCAACTTCCACTTGAACGACCCTCAGGTGGCTCGGGCGC
AGCGTTGAGGACGTCTACACGGCGGAGTTCGCCGCGGAGACGAGCGCGTA
CTACGCTGCCGCCGTCGCCGGCGGCCGCATCACCGTTAACGGCGCCATCG
TCCCCCGCGACTACAGAGTCGAAGCGGGCGACCTGCTGTCGCACAGGGTG
CACCGCCACGAGCTGCCGGCGGCGGGAGGCGCAGTTGAAGTTGTGGCGGA
GACGGACGAGGTCCTGGTGGCGAACAAGCCCGCGGGGCTGCCCGTGCACC
CGTGCGGCGCGTACCGCTACAACACGCTCGTGTGTGTGCTCGCGCACCAG
CGCCCCGCGCTGCCGCAGCTGCACATCTGCCACCGGCTCGACAGGTGAGG
CCGCTGCGCGCGCTGCCAATGTCGCGCCGCAGAGATAGCTGTGCGCGGCG
TGGGCAGGCAGGGGGGCACTGTGGATAGGCCGGCAGACACTGACAGCTCG
CTTTCGTGCGCCAGTTGCCAGGCAGTCTTCCCTCAGCCATGAGCCCTGCC
GGCAGCTCTTGCTCCCGCTCTGCCTGGCGGCGCATTGTCCTGACGAGCCT
GTATTCCCTCTCAGTGACAAGTGCTGAGTCGGCCGTTAACTCTCCCCCCC
CCCCCCCCCCCCTCTCTCTCACCCTCTCTCTCTCTCTCTGCGTGCGCAGG
CTGACGTCGGGCATCGTGATCCTGGCCAAGAGCGCGCAGAAGGCGGCCGC
CGTGTGCGCGCGCGTGCGCAGCGCCAGCGCTCAGAAAACGTACCTGGCGC
GTGTCAAGGGGCGCTTCGGCGTCGCCTTCCCCCCCGCCCTCTGTTGGGAT
GGGCAAGGGGACGCTCCGCCCGCGTACTGGCGAAAACACGCACGCCACGA
CAGCAACGGCGGCGGCGGCGGTGACGGCAGTGGCGATGGCAGTGGCAGCA
GTGGCGGCGGTCAGGATGGCGCGGTAGGGAGTAGTAGCACAGGCGCCGGC
GGCGGCGACAGCAGCAATGGCAACGGCTGCAAGGTTGATGGCTGCAGCGC
CAATGCCGGTGGCGGCGGCGACGGCCGCAGCAGCGGAGCAGGCGCCCCTG
CGGGCGACAGCAGCGGCGGCGGCGGCAGCGGCCAAAGCGCGCTGAGCATC
GACACGGAGGAGGTGGAGGTGTGCGCGCCGGTGCGCGTGGTCTCGTACCG
CGCGTCGACGTACGCGTGCGGCGGCGGCGGCGCGGACGGCGGCGCCGGCG
GCGGCAAGTCGGCGGTCACGCGCGTGCGCGCGCTGCGCTACGACGCCGCG
TCCGACACGACGCTCGTCGCGTGCGCGCCGCGCGAGGGGCGCACGCACCA
GCTGCGCCTGCACCTGCGCTGGCTCGGCCACCCCATCGCCAACGACCCGT
GCTACGGCGGCGCGCTGTTCTGCGCCGACGCCGCGGGGCGCGCGCGCGCG
GAGGCAGCGCGCGCGTGGCTGCGGCGCCGCGGCTGCCCCTGTCCGGCCGA
CACCGGCGCCGAGCCGGAGGAGGAGGCGGCGGATGGCGGCGGCGGTGTCC
GCGGCGGCACTGATGCTGGTAGCGGCGGCGGCGGCGACGCCGGTGCTGCC
AGCAACGGGAGCGGCGAAACTGACACCTCTGGCGGCAGTGCTGACGTTCA
TGGAGACAGCGCCGGCGCCGATGCTGCGGAAGCGCGCCTGCTGCAGGTGC
TGCGCGCGGGGTACAGGGAGGGGGAGAGCGAGGAGTCGTTCGTGCGCCGC
ACGTGCCGCCACTGCTTCGGCCGCAGCGCGCCCGCCGGCAGCACTGGCGG
CGCGACAACAGAGGCAGCGGCGATGCAAGCGAGCGCGCAATCCGGCGCGT
CCACAAAGGATGTTGCAGCGGCGGCGACAACGGCGCATGATGAATCGATG
ACAAAACGCAGCGCAGGTGAGGATGCCGCGGCAGAAGCGCAAGCCGGCGG
CGGCAGCGGCAGCGCGGCGGCGCTGCCGACGGCGGTACTGCCGGACAGCC
CGCGTGCCGCGGCGGGCGTGCCGCTGCCGCTTGTGGCGGCGGCTGTCAGC
GGCGCGCCGCCCGTAGATGCTGCTGCTGATGAGTGTGAGTGCAGCAGCGG
CAGCGGCAGCGGCGGCAGCAGCAGCGGCGGCGGCGTCGACAAGGACTTCG
ATTACGCGATGGAGATGTCGATGCAGGCGCTGACGCGGTCGCCGGGGATC
TGGCTGCACGCGCTGCGCTACAGCGACGAGGGGTGGAGCTACGAGACGGC
GCCGCCGAAGTGGGCCACGGAGACGGGATGGGGGGGTGTAGAGCCGTGAC
GCGTACCTCTGCGCTTCAAACTCATTAGGCTGTTTTCAATGAGATTGTTG
TACGATGAAGGGAATCTGGCTGGTGCGAAAGCTGCCTGCGGCTCCTGGTC
GCCAATTCTTAAGCTGTTTTGAATGCAGTTGCTGCAGTTTGAAAGTGCAT
CTGGCTCTGTTGCGAATAAGATTTTTGCACTTTGAAGTGAACCTGGCTCG
TGCGTCAGCTGCAACATTGCCAACTGGGGGTACAAGCAGTGCTGCAGCAC
GCGCCGGACCTGGTGGTGCAGGCAGCGCGCTTCGAAGTTGAAGTTGCCGC
ATAAAAGCTACCTACATACCGTCTTGTGCCTAATTAGGCGTTGGTGCAGC
ACCCGCATTGGCCGCTGCCACCGCCATTGCACTTCTTGTCCTTGTCATGA
CCTGCTTTATCCCCCCTTCGTGGCGTTGATCCTACGCCGGAGGCGCTCCG
CCTGCAACTATATGCCCATAAACAACGCAATTGACGTCAGGTATGCTCTT
TCGGCTTGCACGGATACAGATTTGAAGTTTTCCTCTCATGATTGCACGGC
GTGCGCCCCCCCCCACCCCGGCCAGGTCTCAACGGTCTGTCAACATAGCT
GACGTCAATGAGGCCATGTGCGAGCAAACCAGCTGCGGGCAGGGCGCAAC
ATCATGGCCACGAAGAGGATATTCGAATTTAAAAGCAGCTGAAGGAAGAC
ATGGAGGCAGGAAGTGAAGCAGGAGGCACTGCGGCCCCCTCGGAAAGGCA
ACGGCGGCAACGCGGGGTCCTGTGGTTTCGAGGAGGAGGTGTGTGCTGTG
CTGCTCTGCAGATGTCGGCGTCCAGCTTGTGGGCCAACAACGAGCACAGC
ACTGTATGTATGCAGCCAGTTTGAGCTGCTGGTGCGGTGCAGTAACTTCA
AACTAGCAGGGGCCTCGAGCTGCCGGGCGGAGGCGGAAACATCATGCTCG
AAAGAAGCCACATGCGACGACACACAAGCACTGTTGTGGTCTATCGTGGC
TGCGAGCATGGTGAAGTGTGCGAATAACACCGCTGCGACCGCCGCGCATG
CCAAGTTCAAGCTGCTGAAGAAGAAGCAGGCTCCAAGCGCAGCACCTGCT
GCACCGCAAGCCAAGCCCAAGCCCGCAAACGCAATGGCTCCCCAAGACGG
AGACAGGGTGGAGAAGGCGATGAAATTTGTCATCCACGTACTCTACGAAG
CTGGTGGCAAGCCTTCACCACAGGTGCAGGATGGCAAACACCGTGTGACT
GTGGATGCTGCTTCATTATCCTCATGCAATGCGCAAGCCTACATCATGAG
GGCACTAATGTTTTGGCAGCAACGTCAATTATAACGAATTTGTATTTGCT
TTTTCATCCATGGAGGCCGCACAATCATTAGGGCAAAAGCTAGTTGATGA
ATTACTGGCGCAGCCATCACGGTGGTCTTTTTGCATGAAGCTGTCTCTAG
ACTATGGTGCTCCTTCTCTCCTGCAGGCTAAGTGCAGCGTCAAGTTGTTG
ACAACATGAGCATTCTCGCTGCCAGGGGTTAAGGCCAATGGATGACATCA
AACTGCCGATGTTCTTGCAGTGATTCTGCGTCATGATCATGCGTGAATGT
CACTGCTGCTGGTCACCGATACCAACTGCGTCATCGCATGCAGGACGGCG
GCGGGGCTCCTACTTCCAACAAGTTGAACAGTGGCTCTCGTGGTGACGTG
CCCCCCCCTGGTAACAAGAAGAAAACCAAGCCTCCGGCTGAGCCGCGGCC
CCCCACCAATGGCTTCTTTAAGTATGCGGAGCTCATGCGCCCCATCATCA
CCAAGATCTGCGATGACGCCAGTGAGTCGCCACACATATAGCACATACTC
CAGATTGCCCAACCTTATATGTACTCCAAAATTGCACTAGCTCAGCTAGT
GCTCCAATCGCTGCCGTTCCTCGCTGACGCCATTTAAACAGTAGCACGCG
AGATTGCATGCTGAGGCGTTTTCCGCTCGTTGAATTGAAATGTGGCGAAA
TGCAATTTGCGGTAATCCATTGTGATGTTGTCAGACAAGTTGCAAACATT
GGCACGTCTTGAGGCTTGAACACGAGGGCTCCCTTTGGTTCTTCTGGTTG
GCTCTGCCGTAGGGCATGAACAAGCATATCTCGTGAAGTAGATGGTGCAT
GATGCAGGCGGTGCTGCATAGCCAAGTCCCTTCCAGTCGTCCACCAGTTG
TGCGCTGGTGACCTGCTCGCAGCTGTTTGTTGTGAGTGGCGTTTTTTGTT
GCACTGGATCATCATGCTTTACTTCACAACAGGACACTACTTCGCATTAC
TTCTGTTCACGCTCAGCCATGTGGCGACTTACTGACACCTTCTTGATGAA
GCTGGCTGCGTTACATTGACATTTCTACCCATGCTCACCATGAGAGTCCA
CAACTGGCTTCATTTTGTTTGTCGCTGTGCCACAGGTGACCCCGACGTCA
AGGTCAACCAGACACAGGTGTCCAAGATTGCATCCCTCATGTGGAAAGAG
TTGACCGAGGACCAGAAACGGGCCTACAAGGCGGTTGCCAAGGCTGACTG
GGATGTCAAGCAGGCCAAGGCAGCCGCCAAGTGA
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Coding sequence (CDS) from alignment at Contig_122:53021..60004+

>mRNA_13902 ID=mRNA_13902|Name=jgi.p|Trimin1|352509|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2760bp|location=Sequence derived from alignment at Contig_122:53021..60004+ (Tribonema minus UTEX_B_3156 )
ATGGAGCATGAAGCGGATTCTGCGCGGCCAGGGGCCAAACGGAGCGCTGA
GGGCGGCTCGGAGAAGAAAGCGCAGCAACAGGCGGCCAAGAGGTTGCGGA
GGCAGGAGAAGCAGAAGCGTAAGCACCAAGGCGAGAACCAGCACAAAGGC
TCTGGTGCCAAGCCCCAGGGCATTGGCAATCTCAGGACCGAGGCTCAAGC
TGTGAAGTACTACACCGATGATAATGGATTTCGACAGGTGCCACCCTATG
TGCACGAGTTCCAGACTTTTGCCAAGGACAGGTGGCTCCGACGCAGCGTC
GATGACGTCTACACGGCGGAGTTCGCCGCGGAGACGCGCTTGTGGCTCGG
GCGCAGCGTTGAGGACGTCTACACGGCGGAGTTCGCCGCGGAGACGAGCG
CGTACTACGCTGCCGCCGTCGCCGGCGGCCGCATCACCGTTAACGGCGCC
ATCGTCCCCCGCGACTACAGAGTCGAAGCGGGCGACCTGCTGTCGCACAG
GGTGCACCGCCACGAGCTGCCGGCGGCGGGAGGCGCAGTTGAAGTTGTGG
CGGAGACGGACGAGGTCCTGGTGGCGAACAAGCCCGCGGGGCTGCCCGTG
CACCCGTGCGGCGCGTACCGCTACAACACGCTCGTGTGTGTGCTCGCGCA
CCAGCGCCCCGCGCTGCCGCAGCTGCACATCTGCCACCGGCTCGACAGGC
TGACGTCGGGCATCGTGATCCTGGCCAAGAGCGCGCAGAAGGCGGCCGCC
GTGTGCGCGCGCGTGCGCAGCGCCAGCGCTCAGAAAACGTACCTGGCGCG
TGTCAAGGGGCGCTTCGGCGTCGCCTTCCCCCCCGCCCTCTGTTGGGATG
GGCAAGGGGACGCTCCGCCCGCGTACTGGCGAAAACACGCACGCCACGAC
AGCAACGGCGGCGGCGGCGGTGACGGCAGTGGCGATGGCAGTGGCAGCAG
TGGCGGCGGTCAGGATGGCGCGGTAGGGAGTAGTAGCACAGGCGCCGGCG
GCGGCGACAGCAGCAATGGCAACGGCTGCAAGGTTGATGGCTGCAGCGCC
AATGCCGGTGGCGGCGGCGACGGCCGCAGCAGCGGAGCAGGCGCCCCTGC
GGGCGACAGCAGCGGCGGCGGCGGCAGCGGCCAAAGCGCGCTGAGCATCG
ACACGGAGGAGGTGGAGGTGTGCGCGCCGGTGCGCGTGGTCTCGTACCGC
GCGTCGACGTACGCGTGCGGCGGCGGCGGCGCGGACGGCGGCGCCGGCGG
CGGCAAGTCGGCGGTCACGCGCGTGCGCGCGCTGCGCTACGACGCCGCGT
CCGACACGACGCTCGTCGCGTGCGCGCCGCGCGAGGGGCGCACGCACCAG
CTGCGCCTGCACCTGCGCTGGCTCGGCCACCCCATCGCCAACGACCCGTG
CTACGGCGGCGCGCTGTTCTGCGCCGACGCCGCGGGGCGCGCGCGCGCGG
AGGCAGCGCGCGCGTGGCTGCGGCGCCGCGGCTGCCCCTGTCCGGCCGAC
ACCGGCGCCGAGCCGGAGGAGGAGGCGGCGGATGGCGGCGGCGGTGTCCG
CGGCGGCACTGATGCTGGTAGCGGCGGCGGCGGCGACGCCGGTGCTGCCA
GCAACGGGAGCGGCGAAACTGACACCTCTGGCGGCAGTGCTGACGTTCAT
GGAGACAGCGCCGGCGCCGATGCTGCGGAAGCGCGCCTGCTGCAGGTGCT
GCGCGCGGGGTACAGGGAGGGGGAGAGCGAGGAGTCGTTCGTGCGCCGCA
CGTGCCGCCACTGCTTCGGCCGCAGCGCGCCCGCCGGCAGCACTGGCGGC
GCGACAACAGAGGCAGCGGCGATGCAAGCGAGCGCGCAATCCGGCGCGTC
CACAAAGGATGTTGCAGCGGCGGCGACAACGGCGCATGATGAATCGATGA
CAAAACGCAGCGCAGGTGAGGATGCCGCGGCAGAAGCGCAAGCCGGCGGC
GGCAGCGGCAGCGCGGCGGCGCTGCCGACGGCGGTACTGCCGGACAGCCC
GCGTGCCGCGGCGGGCGTGCCGCTGCCGCTTGTGGCGGCGGCTGTCAGCG
GCGCGCCGCCCGTAGATGCTGCTGCTGATGAGTGTGAGTGCAGCAGCGGC
AGCGGCAGCGGCGGCAGCAGCAGCGGCGGCGGCGTCGACAAGGACTTCGA
TTACGCGATGGAGATGTCGATGCAGGCGCTGACGCGGTCGCCGGGGATCT
GGCTGCACGCGCTGCGCTACAGCGACGAGGGGTGGAGCTACGAGACGGCG
CCGCCGAAGTGGGCCACGGAGACGGGATGGGGGGGTGTAGAGCCGCAGGA
AGTGAAGCAGGAGGCACTGCGGCCCCCTCGGAAAGGCAACGGCGGCAACG
CGGGGTCCTGTGGTTTCGAGGAGGAGTTCAAGCTGCTGAAGAAGAAGCAG
GCTCCAAGCGCAGCACCTGCTGCACCGCAAGCCAAGCCCAAGCCCGCAAA
CGCAATGGCTCCCCAAGACGGAGACAGGGTGGAGAAGGCGATGAAATTTG
TCATCCACAAGAAAACCAAGCCTCCGGCTGAGCCGCGGCCCCCCACCAAT
GGCTTCTTTAAGTATGCGGAGCTCATGCGCCCCATCATCACCAAGATCTG
CGATGACGCCAGTGACCCCGACGTCAAGGTCAACCAGACACAGGTGTCCA
AGATTGCATCCCTCATGTGGAAAGAGTTGACCGAGGACCAGAAACGGGCC
TACAAGGCGGTTGCCAAGGCTGACTGGGATGTCAAGCAGGCCAAGGCAGC
CGCCAAGTGA
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