mRNA_13616 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A835ZD71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD71_9STRA) HSP 1 Score: 377 bits (968), Expect = 1.730e-130 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
Query: 1 MKGEGLKRRFTKRDGSNLIEAVGLDADTLGEEVLGHWVRQAEDKFESLCFEKGVQRKLAALDASADAAXXXXXXPQLTAALRPQQQQLAQTQSSNGEMLPLPGVSAREAVRAAIMEVKLTERQRLAQQGFHACVPPLRRSPAALTTATAAAHAETSKWRRSAAFSTARSGQFVAAAEAQAQAEVVACSALLDGAQRRLEDVAGVAADLQAANEA 642
MKGEGLKRRFTKRDGSNLIEAVGLDADTLGEEVLGHWVRQAEDKFESLCFEKGVQRKLAALDASADAAXXXXXXPQLTAALRPQQQQLAQTQSSNGEMLPLPGVSAREAVRAAIMEVKLTERQRLAQQGFHACVPPLRRSPAALTTATAAAHAETSKWRRSAAFSTARSGQFVAAAEAQAQAEVVACSALLDGAQRRLEDVAGVAADLQAANEA
Sbjct: 1 MKGEGLKRRFTKRDGSNLIEAVGLDADTLGEEVLGHWVRQAEDKFESLCFEKGVQRKLAALDASADAAXXXXXXPQLTAALRPQQQQLAQTQSSNGEMLPLPGVSAREAVRAAIMEVKLTERQRLAQQGFHACVPPLRRSPAALTTATAAAHAETSKWRRSAAFSTARSGQFVAAAEAQAQAEVVACSALLDGAQRRLEDVAGVAADLQAANEA 214
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A835ZFB8_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB8_9STRA) HSP 1 Score: 432 bits (1111), Expect = 2.510e-150 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 3
Query: 24 MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDMWALAK 674
MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDMWALAK
Sbjct: 1 MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDMWALAK 217
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: D7FHE2_ECTSI (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHE2_ECTSI) HSP 1 Score: 178 bits (452), Expect = 7.110e-51 Identity = 92/187 (49.20%), Postives = 123/187 (65.78%), Query Frame = 3
Query: 27 NAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAA-----------KIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLV 554
AVVFG+TGA+G+EVV LA+ ++ VVA VRR +EW G AA K++VK ++YD + SLP+ + FYCLGTTR DAGSA++F K+D+ YLE + +C+ A V HFSLV++ GASASSP LY K KG+CE V+ G+ SIW+PGLLGRG KA+ VE++ +LV
Sbjct: 18 KAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEW--RGDAAKSKTSGSDANFNKVEVKRINYDTLETSLPEQEMRGKQVVFYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCEKLVRSAGYPHTSIWRPGLLGRGSKAKGVEKVARFLV 202
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A067D405_SAPPC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D405_SAPPC) HSP 1 Score: 159 bits (402), Expect = 2.690e-43 Identity = 99/222 (44.59%), Postives = 133/222 (59.91%), Query Frame = 3
Query: 15 IAGMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPE--GPAAAKIQVKVLDYD-----DIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDM 659
+A A+V GATGAIGREVV QLA + ++VVA RR ++ + G AA+KI V V+DYD D+AG AF CLGTTRKDAGS F K+D Y+E + + K A + +F+LV+A+ A+A+S FLY KTKG E+ +K L F +I QPGLL RG+ +RFVER+ +++ + V+ VAKAMV D E A C + DM
Sbjct: 1 MAEYTALVVGATGAIGREVVKQLAASARCTQVVALSRRAMDASALAAAFPGAAASKIHVHVVDYDHLQPADVAGH-------GANAAFCCLGTTRKDAGSDEAFRKVDLTYVENVGKLAKEANLPYFALVSASNANAASWFLYPKTKGLAEDAIKALSFPRTTIAQPGLLQRGDLSRFVERVGHWVLPTVSVAAVAKAMVTDYETSGATPGL--CILSHNDM 213
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A1V9YKB4_9STRA (Oxidoreductase htatip2-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKB4_9STRA) HSP 1 Score: 158 bits (400), Expect = 5.790e-43 Identity = 92/203 (45.32%), Postives = 126/203 (62.07%), Query Frame = 3
Query: 15 IAGMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAA--AKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAA 617
+A AVV GATGAIGRE+V QL + + + V+A RR ++ + P A AKI+V+V+DYD + L + AF CLGTTRKDAGS F K+D Y+E A + K A +++F+LV+A+ A+A S FLY KTKG E +K LGF I QPGLL RG+ R+VER+ +++ + V+ VAKAM+ D E A
Sbjct: 1 MAEYRAVVVGATGAIGRELVKQLTESTRCTSVIALSRRALDPSALAAAFPGATIAKIRVQVVDYDHL--QLADVASHGANAAFCCLGTTRKDAGSDEAFRKVDLTYVENSAKLAKEADIQYFALVSASNANARSWFLYPKTKGLAEEAIKALGFRRTCILQPGLLQRGDLTRYVERVGQWILPSVSVTGVAKAMIRDYETNGA 201
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: K3X5R0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5R0_GLOUD) HSP 1 Score: 154 bits (389), Expect = 2.730e-41 Identity = 85/203 (41.87%), Postives = 124/203 (61.08%), Query Frame = 3
Query: 30 AVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAA------AKIQVKVLDYDDIA-GSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAA 617
A+V G+TGA+GR++V +L Q K +KV+A RR + ++W PA K++++ +D+D +A G + + + AF CLGTTRKDAGSA F K+D Y Q + K A+V +F L+TA+ A+ +S FLY KTKG E +K L F S ++PGL+ RGE R VE + +Y++ I S +AK MVAD E+ A
Sbjct: 5 ALVIGSTGAVGRDLVAELVQSAKCAKVIALSRREIPESKWSATFPALDATLAQGKLEIRQVDFDQLASGQVIIQPEEKIDAAFSCLGTTRKDAGSAEAFRKVDLEYTTQFGELAKAAKVPYFGLLTASNANKNSWFLYPKTKGEAEESIKVLQFERTSFFRPGLINRGELMRTVEMIGSYVIPSITTSAIAKGMVADYESNVA 207
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A2D4BNE4_PYTIN (Oxidoreductase htatip2-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNE4_PYTIN) HSP 1 Score: 152 bits (383), Expect = 2.410e-40 Identity = 85/204 (41.67%), Postives = 120/204 (58.82%), Query Frame = 3
Query: 15 IAGMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEA 608
++ A+V G+TGA+GRE++ +L K KV+A RR + +W P A K+QV+ +D+D + G + V AF CLGTTRKDAGSA F K+D Y+ + + K A++ + L+TA A+ +S FLY +TKG E+ + L FA I++PGLL RGE AR VE++ YL I + VAK MVAD EA
Sbjct: 8 LSAYTALVVGSTGAVGRELIAELVASAKCEKVIALARREIPEEQWTTAFPRVXVXAAKKKLQVRAVDFDAL-GEKDVPPTERVDAAFCCLGTTRKDAGSAEAFRKVDLEYVTRFGELAKAAQIPYMGLLTATNANKNSWFLYPQTKGEAEDNIIKLSFARTGIFRPGLLNRGELARTVEKIGLYLTPSITATAVAKGMVADFEA 210
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: K3XC48_GLOUD (Epimerase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC48_GLOUD) HSP 1 Score: 151 bits (382), Expect = 2.930e-40 Identity = 82/199 (41.21%), Postives = 123/199 (61.81%), Query Frame = 3
Query: 30 AVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQT-SLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAE 605
A+V G+TGA+GR++V +L + K +KV+A RR + ++W P A K++++ +D+D +A S S + + AF CLGTTRKDAGS F K+D Y Q + K A+V +F L+TA A+ +S FLY KTKG E +K L F S++QPG++ RGE R VE++T+ ++ I S +AK+M+AD E
Sbjct: 5 ALVIGSTGAVGRDLVAELVKSAKCAKVIALSRREIPESKWTTTFPTLDETLAQGKLEIRQVDFDQLASSQAIIQSEEKIDAAFSCLGTTRKDAGSTEAFRKVDLVYTTQFGELTKAAKVPYFGLLTANNANKNSWFLYPKTKGEVEENIKALQFERTSLFQPGVINRGELMRTVEKVTSCILPSITTSAIAKSMIADYE 203
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A5J4XPQ6_9CHLO (NAD(P)-bd_dom domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XPQ6_9CHLO) HSP 1 Score: 148 bits (373), Expect = 6.360e-39 Identity = 93/204 (45.59%), Postives = 122/204 (59.80%), Query Frame = 3
Query: 24 MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASAS------SPF---LYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEA 608
M AVV G TG++G EVV L W++V A RR V + +G +K+ +V++ D++ ++ DN + F LGTTRKDAGSA F K+D Y++ A K A V HFSL T GA+A+ SPF LY+KTKG+ E VK GFA VSI++PG L RGEKAR+ ER+ + L PV VA+AMV DAEA
Sbjct: 1 MKAVVVGGTGSVGMEVVGLLLHSPAWTQVTAVGRREVVISA-AYQGYNPSKLVQEVVNMDNLPDEAA-SAFDNAHSVFCTLGTTRKDAGSAEQFKKVDLHYVQLAAQAAKQAGVTHFSLCTVRGANANMWASSLSPFHALLYIKTKGQAEEAVKAQGFACVSIFRPGALDRGEKARWNERLASRLTTATPVRDVARAMVLDAEA 202
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A3R7NAX8_9STRA (NAD(P)-bd_dom domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NAX8_9STRA) HSP 1 Score: 148 bits (373), Expect = 7.320e-39 Identity = 85/201 (42.29%), Postives = 118/201 (58.71%), Query Frame = 3
Query: 21 GMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAE 605
G A+V GATGA+GR++V +L SKVVA RR + T W P A K+++ +D++++ + + V AF CLGTTRKDAGSA F K+D Y+ A + K A V +F L+TA+ A+ S FLY +TKG E +K LGF SI++PGL+ RGEK R VE + +Y++ I +AK MV D E
Sbjct: 2 GFVALVQGATGAVGRDLVAELVDSASCSKVVALTRREIPETSWGETFPLMDVAAAQTKLEIVPVDFEELHRDWKKIP-EEVDAAFSCLGTTRKDAGSAEAFRKVDLEYVTTFAELAKEAGVPYFGLLTASNANKDSWFLYPQTKGEVEENIKHLGFERTSIFRPGLIDRGEKTRTVESIASYVLPSITTRIIAKGMVVDYE 201
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A8K1CHX1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHX1_PYTOL) HSP 1 Score: 147 bits (372), Expect = 8.200e-39 Identity = 80/203 (39.41%), Postives = 121/203 (59.61%), Query Frame = 3
Query: 27 NAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAA 617
A+V G+TGA+GR+VV +L K +KV+A RR + +W P A +K++V+ +D+D ++ + + V TAF CLGTTR+DAGS F K+D Y+ + + K A V +F L+T+ G++ +S FLY +TKG E +K L F SI++PGL+ RGE AR VE+ ++ + +AK+MV D E AA
Sbjct: 6 TALVVGSTGAVGRDVVAELVSSAKCAKVIALTRRDIPQDQWSKTFPQLDVEAAKSKLEVRAVDFDKLSADDVKRGDEKVDTAFCCLGTTRRDAGSPEAFRKVDLEYVTRFGELTKAAEVPYFGLLTSMGSNKNSWFLYPQTKGEAEENIKKLSFERTSIFRPGLINRGELARAVEKAALWVSPSVTTVAIAKSMVKDFEEGAA 208 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_13616 ID=mRNA_13616|Name=jgi.p|Trimin1|352774|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=790bp|location=Sequence derived from alignment at Contig_131:161834..164641+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAAGGGGGAGGGTCTCAAAAGACGATTCACGAAGCGGGATGGCAGCAAback to top protein sequence of jgi.p|Trimin1|352774 >Trimin1|352774|estExt_Genemark1.C_Ctg_1310022 ID=Trimin1|352774|estExt_Genemark1.C_Ctg_1310022|Name=jgi.p|Trimin1|352774|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=225bp MKGEGLKRRFTKRDGSNLIEAVGLDADTLGEEVLGHWVRQAEDKFESLCFback to top mRNA from alignment at Contig_131:161834..164641+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_13616 ID=mRNA_13616|Name=jgi.p|Trimin1|352774|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2808bp|location=Sequence derived from alignment at Contig_131:161834..164641+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_131:161834..164641+ >mRNA_13616 ID=mRNA_13616|Name=jgi.p|Trimin1|352774|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=675bp|location=Sequence derived from alignment at Contig_131:161834..164641+ (Tribonema minus UTEX_B_3156 )back to top |