mRNA_13616 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352774
Unique NamemRNA_13616
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A835ZD71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD71_9STRA)

HSP 1 Score: 377 bits (968), Expect = 1.730e-130
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
Query:    1 MKGEGLKRRFTKRDGSNLIEAVGLDADTLGEEVLGHWVRQAEDKFESLCFEKGVQRKLAALDASADAAXXXXXXPQLTAALRPQQQQLAQTQSSNGEMLPLPGVSAREAVRAAIMEVKLTERQRLAQQGFHACVPPLRRSPAALTTATAAAHAETSKWRRSAAFSTARSGQFVAAAEAQAQAEVVACSALLDGAQRRLEDVAGVAADLQAANEA 642
            MKGEGLKRRFTKRDGSNLIEAVGLDADTLGEEVLGHWVRQAEDKFESLCFEKGVQRKLAALDASADAAXXXXXXPQLTAALRPQQQQLAQTQSSNGEMLPLPGVSAREAVRAAIMEVKLTERQRLAQQGFHACVPPLRRSPAALTTATAAAHAETSKWRRSAAFSTARSGQFVAAAEAQAQAEVVACSALLDGAQRRLEDVAGVAADLQAANEA
Sbjct:    1 MKGEGLKRRFTKRDGSNLIEAVGLDADTLGEEVLGHWVRQAEDKFESLCFEKGVQRKLAALDASADAAXXXXXXPQLTAALRPQQQQLAQTQSSNGEMLPLPGVSAREAVRAAIMEVKLTERQRLAQQGFHACVPPLRRSPAALTTATAAAHAETSKWRRSAAFSTARSGQFVAAAEAQAQAEVVACSALLDGAQRRLEDVAGVAADLQAANEA 214          
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A835ZFB8_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB8_9STRA)

HSP 1 Score: 432 bits (1111), Expect = 2.510e-150
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 3
Query:   24 MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDMWALAK 674
            MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDMWALAK
Sbjct:    1 MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDMWALAK 217          
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: D7FHE2_ECTSI (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHE2_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 7.110e-51
Identity = 92/187 (49.20%), Postives = 123/187 (65.78%), Query Frame = 3
Query:   27 NAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAA-----------KIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLV 554
             AVVFG+TGA+G+EVV  LA+ ++   VVA VRR    +EW   G AA            K++VK ++YD +  SLP+  +      FYCLGTTR DAGSA++F K+D+ YLE +  +C+ A V HFSLV++ GASASSP LY K KG+CE  V+  G+   SIW+PGLLGRG KA+ VE++  +LV
Sbjct:   18 KAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEW--RGDAAKSKTSGSDANFNKVEVKRINYDTLETSLPEQEMRGKQVVFYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCEKLVRSAGYPHTSIWRPGLLGRGSKAKGVEKVARFLV 202          
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A067D405_SAPPC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D405_SAPPC)

HSP 1 Score: 159 bits (402), Expect = 2.690e-43
Identity = 99/222 (44.59%), Postives = 133/222 (59.91%), Query Frame = 3
Query:   15 IAGMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPE--GPAAAKIQVKVLDYD-----DIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDM 659
            +A   A+V GATGAIGREVV QLA   + ++VVA  RR ++ +       G AA+KI V V+DYD     D+AG            AF CLGTTRKDAGS   F K+D  Y+E +  + K A + +F+LV+A+ A+A+S FLY KTKG  E+ +K L F   +I QPGLL RG+ +RFVER+  +++  + V+ VAKAMV D E   A      C   + DM
Sbjct:    1 MAEYTALVVGATGAIGREVVKQLAASARCTQVVALSRRAMDASALAAAFPGAAASKIHVHVVDYDHLQPADVAGH-------GANAAFCCLGTTRKDAGSDEAFRKVDLTYVENVGKLAKEANLPYFALVSASNANAASWFLYPKTKGLAEDAIKALSFPRTTIAQPGLLQRGDLSRFVERVGHWVLPTVSVAAVAKAMVTDYETSGATPGL--CILSHNDM 213          
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A1V9YKB4_9STRA (Oxidoreductase htatip2-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKB4_9STRA)

HSP 1 Score: 158 bits (400), Expect = 5.790e-43
Identity = 92/203 (45.32%), Postives = 126/203 (62.07%), Query Frame = 3
Query:   15 IAGMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAA--AKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAA 617
            +A   AVV GATGAIGRE+V QL +  + + V+A  RR ++ +      P A  AKI+V+V+DYD +   L   +      AF CLGTTRKDAGS   F K+D  Y+E  A + K A +++F+LV+A+ A+A S FLY KTKG  E  +K LGF    I QPGLL RG+  R+VER+  +++  + V+ VAKAM+ D E   A
Sbjct:    1 MAEYRAVVVGATGAIGRELVKQLTESTRCTSVIALSRRALDPSALAAAFPGATIAKIRVQVVDYDHL--QLADVASHGANAAFCCLGTTRKDAGSDEAFRKVDLTYVENSAKLAKEADIQYFALVSASNANARSWFLYPKTKGLAEEAIKALGFRRTCILQPGLLQRGDLTRYVERVGQWILPSVSVTGVAKAMIRDYETNGA 201          
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: K3X5R0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5R0_GLOUD)

HSP 1 Score: 154 bits (389), Expect = 2.730e-41
Identity = 85/203 (41.87%), Postives = 124/203 (61.08%), Query Frame = 3
Query:   30 AVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAA------AKIQVKVLDYDDIA-GSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAA 617
            A+V G+TGA+GR++V +L Q  K +KV+A  RR +  ++W    PA        K++++ +D+D +A G +     + +  AF CLGTTRKDAGSA  F K+D  Y  Q   + K A+V +F L+TA+ A+ +S FLY KTKG  E  +K L F   S ++PGL+ RGE  R VE + +Y++  I  S +AK MVAD E+  A
Sbjct:    5 ALVIGSTGAVGRDLVAELVQSAKCAKVIALSRREIPESKWSATFPALDATLAQGKLEIRQVDFDQLASGQVIIQPEEKIDAAFSCLGTTRKDAGSAEAFRKVDLEYTTQFGELAKAAKVPYFGLLTASNANKNSWFLYPKTKGEAEESIKVLQFERTSFFRPGLINRGELMRTVEMIGSYVIPSITTSAIAKGMVADYESNVA 207          
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A2D4BNE4_PYTIN (Oxidoreductase htatip2-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNE4_PYTIN)

HSP 1 Score: 152 bits (383), Expect = 2.410e-40
Identity = 85/204 (41.67%), Postives = 120/204 (58.82%), Query Frame = 3
Query:   15 IAGMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEA 608
            ++   A+V G+TGA+GRE++ +L    K  KV+A  RR +   +W    P      A  K+QV+ +D+D + G       + V  AF CLGTTRKDAGSA  F K+D  Y+ +   + K A++ +  L+TA  A+ +S FLY +TKG  E+ +  L FA   I++PGLL RGE AR VE++  YL   I  + VAK MVAD EA
Sbjct:    8 LSAYTALVVGSTGAVGRELIAELVASAKCEKVIALARREIPEEQWTTAFPRVXVXAAKKKLQVRAVDFDAL-GEKDVPPTERVDAAFCCLGTTRKDAGSAEAFRKVDLEYVTRFGELAKAAQIPYMGLLTATNANKNSWFLYPQTKGEAEDNIIKLSFARTGIFRPGLLNRGELARTVEKIGLYLTPSITATAVAKGMVADFEA 210          
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: K3XC48_GLOUD (Epimerase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC48_GLOUD)

HSP 1 Score: 151 bits (382), Expect = 2.930e-40
Identity = 82/199 (41.21%), Postives = 123/199 (61.81%), Query Frame = 3
Query:   30 AVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQT-SLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAE 605
            A+V G+TGA+GR++V +L +  K +KV+A  RR +  ++W    P      A  K++++ +D+D +A S     S + +  AF CLGTTRKDAGS   F K+D  Y  Q   + K A+V +F L+TA  A+ +S FLY KTKG  E  +K L F   S++QPG++ RGE  R VE++T+ ++  I  S +AK+M+AD E
Sbjct:    5 ALVIGSTGAVGRDLVAELVKSAKCAKVIALSRREIPESKWTTTFPTLDETLAQGKLEIRQVDFDQLASSQAIIQSEEKIDAAFSCLGTTRKDAGSTEAFRKVDLVYTTQFGELTKAAKVPYFGLLTANNANKNSWFLYPKTKGEVEENIKALQFERTSLFQPGVINRGELMRTVEKVTSCILPSITTSAIAKSMIADYE 203          
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A5J4XPQ6_9CHLO (NAD(P)-bd_dom domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XPQ6_9CHLO)

HSP 1 Score: 148 bits (373), Expect = 6.360e-39
Identity = 93/204 (45.59%), Postives = 122/204 (59.80%), Query Frame = 3
Query:   24 MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASAS------SPF---LYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEA 608
            M AVV G TG++G EVV  L     W++V A  RR V  +    +G   +K+  +V++ D++      ++ DN  + F  LGTTRKDAGSA  F K+D  Y++  A   K A V HFSL T  GA+A+      SPF   LY+KTKG+ E  VK  GFA VSI++PG L RGEKAR+ ER+ + L    PV  VA+AMV DAEA
Sbjct:    1 MKAVVVGGTGSVGMEVVGLLLHSPAWTQVTAVGRREVVISA-AYQGYNPSKLVQEVVNMDNLPDEAA-SAFDNAHSVFCTLGTTRKDAGSAEQFKKVDLHYVQLAAQAAKQAGVTHFSLCTVRGANANMWASSLSPFHALLYIKTKGQAEEAVKAQGFACVSIFRPGALDRGEKARWNERLASRLTTATPVRDVARAMVLDAEA 202          
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A3R7NAX8_9STRA (NAD(P)-bd_dom domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NAX8_9STRA)

HSP 1 Score: 148 bits (373), Expect = 7.320e-39
Identity = 85/201 (42.29%), Postives = 118/201 (58.71%), Query Frame = 3
Query:   21 GMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAE 605
            G  A+V GATGA+GR++V +L      SKVVA  RR +  T W    P      A  K+++  +D++++     +   + V  AF CLGTTRKDAGSA  F K+D  Y+   A + K A V +F L+TA+ A+  S FLY +TKG  E  +K LGF   SI++PGL+ RGEK R VE + +Y++  I    +AK MV D E
Sbjct:    2 GFVALVQGATGAVGRDLVAELVDSASCSKVVALTRREIPETSWGETFPLMDVAAAQTKLEIVPVDFEELHRDWKKIP-EEVDAAFSCLGTTRKDAGSAEAFRKVDLEYVTTFAELAKEAGVPYFGLLTASNANKDSWFLYPQTKGEVEENIKHLGFERTSIFRPGLIDRGEKTRTVESIASYVLPSITTRIIAKGMVVDYE 201          
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Match: A0A8K1CHX1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHX1_PYTOL)

HSP 1 Score: 147 bits (372), Expect = 8.200e-39
Identity = 80/203 (39.41%), Postives = 121/203 (59.61%), Query Frame = 3
Query:   27 NAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAA 617
             A+V G+TGA+GR+VV +L    K +KV+A  RR +   +W    P      A +K++V+ +D+D ++    +   + V TAF CLGTTR+DAGS   F K+D  Y+ +   + K A V +F L+T+ G++ +S FLY +TKG  E  +K L F   SI++PGL+ RGE AR VE+   ++   +    +AK+MV D E  AA
Sbjct:    6 TALVVGSTGAVGRDVVAELVSSAKCAKVIALTRRDIPQDQWSKTFPQLDVEAAKSKLEVRAVDFDKLSADDVKRGDEKVDTAFCCLGTTRRDAGSPEAFRKVDLEYVTRFGELTKAAEVPYFGLLTSMGSNKNSWFLYPQTKGEAEENIKKLSFERTSIFRPGLINRGELARAVEKAALWVSPSVTTVAIAKSMVKDFEEGAA 208          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352774 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZD71_9STRA1.730e-130100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|352774 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFB8_9STRA2.510e-150100.00NAD(P)-bd_dom domain-containing protein n=1 Tax=Tr... [more]
D7FHE2_ECTSI7.110e-5149.20NAD(P)-bd_dom domain-containing protein n=2 Tax=Ec... [more]
A0A067D405_SAPPC2.690e-4344.59NAD(P)-bd_dom domain-containing protein n=2 Tax=Sa... [more]
A0A1V9YKB4_9STRA5.790e-4345.32Oxidoreductase htatip2-like protein n=1 Tax=Achlya... [more]
K3X5R0_GLOUD2.730e-4141.87Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BNE4_PYTIN2.410e-4041.67Oxidoreductase htatip2-like protein n=1 Tax=Pythiu... [more]
K3XC48_GLOUD2.930e-4041.21Epimerase domain-containing protein n=1 Tax=Globis... [more]
A0A5J4XPQ6_9CHLO6.360e-3945.59NAD(P)-bd_dom domain-containing protein n=1 Tax=Tr... [more]
A0A3R7NAX8_9STRA7.320e-3942.29NAD(P)-bd_dom domain-containing protein n=4 Tax=Ph... [more]
A0A8K1CHX1_PYTOL8.200e-3939.41Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_131contigContig_131:161834..164641 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352774|estExt_Genemark1.C_Ctg_1310022
Hectar predicted targeting categoryother localisation
TranscriptId353096
TrackFilteredModels1
ProteinId352774
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352774gene_13616Tribonema minus UTEX_B_3156 geneContig_131 161834..164641 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352774Trimin1|352774|estExt_Genemark1.C_Ctg_1310022Tribonema minus UTEX_B_3156 polypeptideContig_131 161834..164526 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13616_1exon_13616_1Tribonema minus UTEX_B_3156 exonContig_131 161834..161959 +
exon_13616_2exon_13616_2Tribonema minus UTEX_B_3156 exonContig_131 163501..163758 +
exon_13616_3exon_13616_3Tribonema minus UTEX_B_3156 exonContig_131 163845..163976 +
exon_13616_4exon_13616_4Tribonema minus UTEX_B_3156 exonContig_131 164368..164641 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13616CDS_13616Tribonema minus UTEX_B_3156 CDSContig_131 161834..161959 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_13616UTR3_13616Tribonema minus UTEX_B_3156 three_prime_UTRContig_131 164527..164641 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13616 ID=mRNA_13616|Name=jgi.p|Trimin1|352774|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=790bp|location=Sequence derived from alignment at Contig_131:161834..164641+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGGGGGAGGGTCTCAAAAGACGATTCACGAAGCGGGATGGCAGCAA
TCTTATAGAAGCTGTGGGGCTGGACGCGGATACATTAGGGGAAGAAGTGC
TGGGCCATTGGGTCAGGCAAGCAGAGGACAAGTTTGAGTCGCTGTGCTTC
GAAAAGGGCGTGCAGCGGAAGCTGGCGGCGCTGGATGCGAGCGCCGACGC
CGCAGCGGCAGCAGCGCCGGCGCCGCAGCTGACGGCGGCGCTGCGACCAC
AGCAGCAGCAGCTCGCACAAACGCAGAGCAGCAATGGGGAGATGCTGCCG
CTGCCGGGCGTAAGCGCGCGGGAGGCGGTGCGCGCGGCGATCATGGAGGT
GAAACTCACAGAGCGGCAGCGGCTGGCGCAGCAGGGTTTCCACGCCTGCG
TGCCGCCGCTGCGCCGCTCACCGGCAGCGCTCACGACGGCGACGGCGGCG
GCGCATGCGGAGACGAGCAAGTGGCGCCGCTCGGCGGCGTTCAGCACTGC
CCGGTCCGGCCAGTTTGTGGCCGCCGCGGAGGCGCAGGCGCAGGCGGAGG
TGGTCGCGTGCAGCGCGCTGCTCGACGGCGCGCAGCGGCGCCTCGAGGAC
GTCGCCGGCGTCGCGGCGGACCTGCAGGCTGCCAACGAGGCAGCGGCGGC
GGCGGAGCAGCAGCAGCAGCGATAGCGCGCGTCGCTGGTAACGGCGATGG
CGCGCTCGCGGCAGGCGGCGCCGGCGATGCGTCGGCAACGGCGGCGGCGC
GCGGCAGCGCCTAGCGGCAGCCGCAAGAGCGCAGCAGAGG
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protein sequence of jgi.p|Trimin1|352774

>Trimin1|352774|estExt_Genemark1.C_Ctg_1310022 ID=Trimin1|352774|estExt_Genemark1.C_Ctg_1310022|Name=jgi.p|Trimin1|352774|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=225bp
MKGEGLKRRFTKRDGSNLIEAVGLDADTLGEEVLGHWVRQAEDKFESLCF
EKGVQRKLAALDASADAAAAAAPAPQLTAALRPQQQQLAQTQSSNGEMLP
LPGVSAREAVRAAIMEVKLTERQRLAQQGFHACVPPLRRSPAALTTATAA
AHAETSKWRRSAAFSTARSGQFVAAAEAQAQAEVVACSALLDGAQRRLED
VAGVAADLQAANEAAAAAEQQQQR*
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mRNA from alignment at Contig_131:161834..164641+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13616 ID=mRNA_13616|Name=jgi.p|Trimin1|352774|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2808bp|location=Sequence derived from alignment at Contig_131:161834..164641+ (Tribonema minus UTEX_B_3156 )
ATGAAGGGGGAGGGTCTCAAAAGACGATTCACGAAGCGGGATGGCAGCAA TCTTATAGAAGCTGTGGGGCTGGACGCGGATACATTAGGGGAAGAAGTGC TGGGCCATTGGGTCAGGCAAGCAGAGGTGCGTTCAATGTTACAACTGAAA CTTTGCTGCATGGCAGTTGGTGCATCGCGATGCTCATTGGAGCCACTAGC CAAACTTCCTTGTGAACTTTGTTGTCATGCTGTGAAGAGTATAGTGGTTT GTTAATCCAGCAGTTGCGCCAAGTGCGTCCCAAAGCAGGAGACATCTGCA TCTTGGCAAGTTTGCTGTGTCACAGTCATTCACGCAATACAGTGCAGCTT TAAACAACACTTGCAGTCGCAAGCGAACAGTATCCTCCGCCACTACGCAT CAACGTTGAATGCTAAACACAAAGGGTTTGTGAGTTGATGGTTACTCCAG TATTTGGATGCCGTCATGGTCGATGACAATTGTATGGGCAGGCTGCTGGG TCTCAATGCCACTGTGCATAGACCCCGGTAAGACCGGCGACAGCGATACG TTGGCGGATGGACTGTTTGCAGCATTCCAGTCACAATCACAGCCACGGAC AAGCAGACCGACGCCGCCAGGAGGATGATGTCGTGCATCTGGTGCTGTCA TGTCATTTAGAGCACTGCCAAGGGCTCTGCCACGCATCGCACACGTCTGT TCCAGGTGCTGCGCCAGCCACCCACTTTCAGAGCCGTTGGAGCAGTTGCA CAGGCTGCAAGCGACAGCGCGTTGTTCAGCACACCACAAAGGCCAGACAT TAGCGTGCGAACACTTGAAGACCGTCGATCGCACAAAGCACGAGCCCAGA GCATTATTGGACTTGCGGTGATTGAAGTCGAGATGTATAATCGATAGTTT CCTGATGACAAAAGCGTCACAACTGAGAGACGGATGAATGAGGTCAATGA GCACAATCTCACACTTGAACGATTCTAAATTAGTTGGGTGAATGTACAAA GCATGCTCCTCTGGACGCAATGGCGTCCAGTACATGCCATTGCGGTCCCT GTTGATCAGCAACTACGCTTGGCATGCATGCAGCCTCAAGTAACGGGCAG TCCTATCATCCAAGACACAGATGCGCGCATTCTAGTACTGGCAGCACTGG ATGAGCGCTGGCTATGTGTCATGCGCAATCGCATGAATGGCGAACGCCCA GGTACATACGCCCAGGTACATAATAATCACAATGCTTGTGGAGCGCAGTG CTTGTGCAGCGCAGACAGCAAATGCGTTCACTAGCCTGCACGGCAACTCT GTCTCCAGGACCATGTCTCATCGCCGAATGAGGGCATATCGCAGCACCCT AGGCAGGGCGATTGGCGCACGAAGTGGAAGTGACAGGCAGCTCTCAGACT GGTAATGGAATCGAGGTTTGGCTGATGGATTGCAGCTGCAGCTGTACCAT AGGCAGTAGAGTTGCGTGCACTGCCGACGCACCAAGCAGCAGCAGCAGCA GCAGCAGCGGCGCGTCAATCAATCACGACTCTTCACACATCAGCCAATGC CGCCAATTACATGCATTTACGCGTTGCTTCACTCACTGCTTGAAGCCGAG CTTCGACCAGTCTTCCTCGCAATCTCAATCCCCGCGCATTCTGCCAAAAA CATACAACAATGCGCAGGACAAGTTTGAGTCGCTGTGCTTCGAAAAGGGC GTGCAGCGGAAGCTGGCGGCGCTGGATGCGAGCGCCGACGCCGCAGCGGC AGCAGCGCCGGCGCCGCAGCTGACGGCGGCGCTGCGACCACAGCAGCAGC AGCTCGCACAAACGCAGAGCAGCAATGGGGAGATGCTGCCGCTGCCGGGC GTAAGCGCGCGGGAGGCGGTGCGCGCGGCGATCATGGAGGTGAAACTCAC AGAGCGGCAGCGGCTGGCGCAGCAGGTGCGTCGATGCTCGCCTTCACCCA TTGGTTCTCCTACCTGTGTGATCATTGCACCGCTGCGCAAATGTGAGCGA CTCTGGCAGAGGGTTTCCACGCCTGCGTGCCGCCGCTGCGCCGCTCACCG GCAGCGCTCACGACGGCGACGGCGGCGGCGCATGCGGAGACGAGCAAGTG GCGCCGCTCGGCGGCGTTCAGCACTGCCCGGTCCGGCCAGTTTGTGGCCT GGGGTATATTACTGTGTGTCCAATGAGCTGCATGGCAGCCCACATGTGAA TCGCGCACGACGGCACTCACACGAGCTGCAGCCATAGGCAGCGCAGCGGC TGCAGAGGCTGCAGGGGAGGCGCAGGGACACATGCCGCCGTCATCAAGAT CGATCTGGATGCAGTCTGCAGAGCAACATGGCCCATGGCCATTGTCGCAG ATTATCCCCATATCTACAACTGCATCCATATTTCTCTCGCTGCGGCGGGC TCTGGCAAGGTTTGTGCCCTGCCCCTGCGTCACGTCATGCGCGCACTGGC GCGGTCGACGGTCCCATCACGCGCTACCTACTGCACGCGCGGTAATCACA ACGATTGCGCAAATGCGCACGCGCGCGCATGCAGGTGGCCGCCGCGGAGG CGCAGGCGCAGGCGGAGGTGGTCGCGTGCAGCGCGCTGCTCGACGGCGCG CAGCGGCGCCTCGAGGACGTCGCCGGCGTCGCGGCGGACCTGCAGGCTGC CAACGAGGCAGCGGCGGCGGCGGAGCAGCAGCAGCAGCGATAGCGCGCGT CGCTGGTAACGGCGATGGCGCGCTCGCGGCAGGCGGCGCCGGCGATGCGT CGGCAACGGCGGCGGCGCGCGGCAGCGCCTAGCGGCAGCCGCAAGAGCGC AGCAGAGG
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Coding sequence (CDS) from alignment at Contig_131:161834..164641+

>mRNA_13616 ID=mRNA_13616|Name=jgi.p|Trimin1|352774|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=675bp|location=Sequence derived from alignment at Contig_131:161834..164641+ (Tribonema minus UTEX_B_3156 )
ATGAAGGGGGAGGGTCTCAAAAGACGATTCACGAAGCGGGATGGCAGCAA
TCTTATAGAAGCTGTGGGGCTGGACGCGGATACATTAGGGGAAGAAGTGC
TGGGCCATTGGGTCAGGCAAGCAGAGGACAAGTTTGAGTCGCTGTGCTTC
GAAAAGGGCGTGCAGCGGAAGCTGGCGGCGCTGGATGCGAGCGCCGACGC
CGCAGCGGCAGCAGCGCCGGCGCCGCAGCTGACGGCGGCGCTGCGACCAC
AGCAGCAGCAGCTCGCACAAACGCAGAGCAGCAATGGGGAGATGCTGCCG
CTGCCGGGCGTAAGCGCGCGGGAGGCGGTGCGCGCGGCGATCATGGAGGT
GAAACTCACAGAGCGGCAGCGGCTGGCGCAGCAGGGTTTCCACGCCTGCG
TGCCGCCGCTGCGCCGCTCACCGGCAGCGCTCACGACGGCGACGGCGGCG
GCGCATGCGGAGACGAGCAAGTGGCGCCGCTCGGCGGCGTTCAGCACTGC
CCGGTCCGGCCAGTTTGTGGCCGCCGCGGAGGCGCAGGCGCAGGCGGAGG
TGGTCGCGTGCAGCGCGCTGCTCGACGGCGCGCAGCGGCGCCTCGAGGAC
GTCGCCGGCGTCGCGGCGGACCTGCAGGCTGCCAACGAGGCAGCGGCGGC
GGCGGAGCAGCAGCAGCAGCGATAG
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