mRNA_13531 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351485
Unique NamemRNA_13531
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835YS17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS17_9STRA)

HSP 1 Score: 558 bits (1437), Expect = 5.380e-201
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 1 
Query:    1 MDSFVGMDKVFDLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSRETAEPYIKYGFEVCHPEKLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDPHFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSLYSHLRNSPGPG 819
            MDSFVGMDKVFDLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSRETAEPYIKYGFEVCHPEKLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDPHFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSLYSHLRNSPGPG
Sbjct:    1 MDSFVGMDKVFDLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSRETAEPYIKYGFEVCHPEKLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDPHFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSLYSHLRNSPGPG 273
[Close]
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A836CEQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ0_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.900e-60
Identity = 118/262 (45.04%), Postives = 164/262 (62.60%), Query Frame = 1 
Query:   25 KVFDLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSR-----ETAEPY----IKYGFEVCH--PEKLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDP-HFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSH 774
            KVFDLLP GGM YH FV+ CGAPGVLQ+A GD +++PSG SHA+MVA A  PLLVR++ +     E A P      K+G +VCH  PE+      E G++Y+LP ++  S W YA WVY   + I++ +R  A+  AA+  ++ +VC+ VRRGD + +   + RYP LD +TS E IL  +   VP  S+LYIATN++DP  FF+ L A Y   TL +F       + LP S+ L+DY ++  CD+LIP F + +S+G   H
Sbjct:   45 KVFDLLPAGGMLYHQFVQKCGAPGVLQQALGDVVIMPSGASHADMVAQAGAPLLVREWDQREQQLEPATPLDEQQAKFGLQVCHKKPEQQ-----EEGLDYSLPDKL-WSKW-YAKWVYRAVDSIMSDMRQAAELNAAS--NALVVCLHVRRGDKITSRIGQFRYPNLDYETSPEGILKAIELFVPHGSVLYIATNQEDPVAFFEPLQAHYTAVTLYHFPKRILPHKYLPSSMALVDYEVMDKCDRLIPKFASEESRGFEQH 297
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BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835ZNY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNY4_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.680e-53
Identity = 123/310 (39.68%), Postives = 162/310 (52.26%), Query Frame = 1 
Query:   25 KVFDLLPRGGMFYHDFVKGCGAPGVLQE----------------------------------------------------ANGDALVVPSGTSHANMVAAADVPLLVRDFSRETA-EPYIKYGFEVCH--PEKLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDP-HFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSL 786
            K+FDLL  GGM YH FV+GCGAPGVLQE                                                    A GD  ++PSG+SHA MVA A VPLLVR++ R     P  K+GF+VCH  PE       E GV+YTLP ++  + W YA WVY   + I+  ++   +   +T   + +VC+ VRRGD +     + RYP LD +TS E I+ T+ P V   S+LYIATN+QDP  FF  L ARY   TL +F       + LP S+ ++DY ++  CD+LIPTF + +SKG   H VSL
Sbjct:  210 KLFDLLSAGGMLYHQFVQGCGAPGVLQEVRISLPYVLTHDSDIHLLLNRLLRAFDHHSNARRTLPHWFVVVGGASKALQEAAGDVAIMPSGSSHAEMVAQAGVPLLVREWDRRVKLTPEAKFGFQVCHQKPEHR-----EEGVDYTLPKKL-WNVW-YAKWVYRIVDGIMRDMKK--ETALSTTKDAMVVCLHVRRGDKLTIEVDKERYPNLDYETSPEGIMATIEPFVSHGSVLYIATNQQDPVAFFAPLQARYTAMTLYHFPKRIPAHRYLPSSMAMVDYEVMDKCDRLIPTFASEESKGFPQH-VSL 509
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BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835Z745_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z745_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.220e-49
Identity = 116/279 (41.58%), Postives = 152/279 (54.48%), Query Frame = 1 
Query:   40 LPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFS-----------RETAEPYI-KYGFEVCH-PEKL----PSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQL----RAGADEVAATPG---------------SSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDP-HFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRS-CDQLIPTFPAVDSKG 762
            L RGGMFYH+F +GCGAPGVL E +GDA+V+PSG +HA M+A AD PLLVR +            R   + +  ++GF+VCH PE+     PS   EPGV+Y LP  I     IY++WVY  +  I   L    RA  D  AA                  +  +VC+ VRRGD +  P++  +YP LD  TS   I  T+   VP+ S L+IATNE+DP  FF  L A Y V +L ++ T       L  +L L+DYTIL   C  LIPTF    ++G
Sbjct:  392 LDRGGMFYHEFARGCGAPGVLPEESGDAVVMPSGATHAEMLAHADAPLLVRQWQYDQGDYAAAALRSAPDAFTSRFGFQVCHRPERARADYPSVFKEPGVDYALPPGIWSR--IYSEWVYRTAKVIAGDLWRTTRARGDAAAAAAAVDSAQHGAAPAAAAVTGMVVCLHVRRGDKITNPNVSKKYPDLDFDTSPAGIYRTISLYVPDGSTLFIATNERDPVAFFRPLEAHYRVTSLAHYPTILAPGAFLGSTLALVDYTILGGQCPLLIPTFTGETARG 668
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BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A836CHA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA1_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.940e-49
Identity = 132/354 (37.29%), Postives = 176/354 (49.72%), Query Frame = 1 
Query:    1 MDSFVGMDKVF-------DL-------------LPRGGMFYHDFVKGCGAPGVLQEANGDALV-------VPSGTSHANMVAAADVPLLVRDFSRE---------------TAEPYIK---------------------YGFEVCHPEKLPSP-----VFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAI---------------------LDTLRPIVPEQSMLYIATNEQDPH-FFDGLNARYHVRTL-DYF-LTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSL 786
            +DSF G+DK         D+             LP+GG+F+H+FV+GCGAPG+LQE +GD  V       VP   SHA+M+A A VPLLVR++                  +  P ++                     YG++VCH   +PS      V EPGV+Y++P  +      YADWVY+ +  ++  L+A    + A     ++VCV VRRGD+V  P MR+RYP LD  T AEAI                     L TL P VP+ ++LYIATNE+DP  +F  L ARY VR L DY  L       LLP SL L DY +L  C  +IPTF +  + G G  G+SL
Sbjct:  246 LDSFTGIDKTHIGGEYHADVPFTAWYNSNAMAGLPQGGLFWHEFVQGCGAPGILQEGSGDVAVGTGDVAVVPPSASHADMLAHAGVPLLVREWDASALRRSATTTASLTDSSGRPDMRGSVTTTMPPXXXXXXXXXXXXYGYQVCHRPDVPSARWPKVVSEPGVDYSMPEGLKSRP--YADWVYSTTRAMLDDLKAEGAALGA-----QVVCVHVRRGDMVRAPGMRARYPSLDRDTFAEAISICKHGAWXXXXXXXXXXXXILATLAPRVPQGTILYIATNERDPAAYFAPLAARYAVRALGDYVDLAAPPGRLLLPSSLALFDYAMLTRCPAVIPTFASEAASG-GFEGLSL 591
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BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835ZJK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJK4_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.310e-49
Identity = 109/259 (42.08%), Postives = 150/259 (57.92%), Query Frame = 1 
Query:   25 KVFDLLPRGG-MFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSRETAEPYIKYGFEVCHPEKLPSPVFEPGVNYTLPAEISGSDWI---YADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDP-HFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSL 786
             VF  +  GG + YH+F + CGAPGVLQEAN D  ++PSG SH++M A A VPLLVR +  +  +P  KYG+ +C   +  +   E GV+YTLPA + G  +    YA WV   +  + A+L+  A   A     + +VC+ VRRGD +      ++YP L+ +TS E IL T+ P VP  S+LY+ATNE DP  +F+ L   Y V +L +F         L  SL L+DY IL  C + IPTF + D+KG   H VSL
Sbjct:    2 NVFIRVNTGGTVLYHEFARECGAPGVLQEANQDLAIMPSGASHSDMAAKAHVPLLVRSWD-QGLQPAEKYGYRICR-HRSAAAQSESGVDYTLPAGLGGRAYAPHAYAPWVDRMTARVWAELQKRAALNARE--DALVVCLHVRRGDKL----SYTKYPNLNYETSPEGILKTIEPHVPHGSVLYLATNEPDPVAYFEPLRKHYDVVSLAHFARLLSTDLYLLSSLGLVDYEILGKCQRTIPTFASEDAKGFKQH-VSL 251
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BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835Z0A5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0A5_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.690e-45
Identity = 114/329 (34.65%), Postives = 158/329 (48.02%), Query Frame = 1 
Query:    1 MDSFVGMDKV--------------------FDLLPRGGMFYHDFVKGCGAPGV-------------------------------LQEANG---------DALVVPSGTSHANMVAAADVPLLVRDFSRE----TAEPYIKYGFEVCHPE-----KLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDPH-FFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTIL-RSCDQLIPTFPAVDSKGEGSH 774
            +DSF+GM ++                     +    G MFYHDFV+ CGAPGV                               L  A+G         D  ++PSG++HA+M A ADVPLLVR +  +       P  ++GF+VCHP      + P+   EPGV+Y+ P ++ G    YA WVY  +  I++ +          PG  KI C+ VRRGD V   S + RYP LD  TS E I  T++P +   S LY ATN++D   FF  L   Y VRTL+++       + L PSL L+DY +L   C  L+PTF + +S+G G H
Sbjct:  134 LDSFLGMSRIHADEDYNAEVPYPVWYSTKGLERARAGAMFYHDFVRDCGAPGVFHVLSSLVAVLSVCTXXXXXXXXXXVGGRGILATASGAATAAAAVPDVALMPSGSTHADMAARADVPLLVRHWDHDDRSNATRPAFRFGFQVCHPPETADARYPTGAREPGVDYSFPRKLWGKK--YAPWVYDMARYILSDMWKDKK-----PGL-KIACIHVRRGDKVELESQKQRYPNLDYDTSPEGIRRTIKPWLNPGSTLYFATNQKDAKAFFAPLEDEYIVRTLEHYSDVLPPEKFLSPSLALVDYAVLIGGCPTLLPTFVSEESRGFGPH 454
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BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835ZIW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIW3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.860e-22
Identity = 56/135 (41.48%), Postives = 75/135 (55.56%), Query Frame = 1 
Query:  373 QLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQD-PHFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSH 774
            +L     E  A    + + C+ VRRGD V     ++RYP LD +TS E IL T++P VP+ S+LYIATNE +   FF+ L  RY V TL +          L  SL ++DY IL  C Q+IPTF +  +KG   H
Sbjct:    3 RLALALQEAHAQHADAVLACLHVRRGDKVSRVGQQARYPNLDFETSPEGILQTIKPHVPQGSVLYIATNEPEVATFFEPLRERYSVFTLVHIPDILNPKDFLGSSLAMIDYEILDKCPQVIPTFNSEHTKGFEQH 137
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BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835YIP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIP5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.940e-17
Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 1 
Query:   34 DLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSRETAEPYIKYGFEVC 246
            D+LP G MFYHDFVKGCGAPGV  + N   +++P+  S  +M A A VPLLVRDF R T  P I++G++VC
Sbjct:   45 DVLPAGIMFYHDFVKGCGAPGVYAQTNDTTVIMPADASRGDMEAHAHVPLLVRDFER-TPAPTIRFGYQVC 114
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835YS17_9STRA5.380e-201100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEQ0_9STRA1.900e-6045.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZNY4_9STRA1.680e-5339.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z745_9STRA1.220e-4941.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHA1_9STRA2.940e-4937.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZJK4_9STRA3.310e-4942.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0A5_9STRA3.690e-4534.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIW3_9STRA1.860e-2241.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIP5_9STRA6.940e-1756.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_91contigContig_91:560833..565632 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351485|estExt_Genemark1.C_Ctg_910047
Max annot lvl35493|Streptophyta
EggNOG OGs28P4T@1|root,2QS14@2759|Eukaryota,37MZH@33090|Viridiplantae,3GDVV@35493|Streptophyta
Evalue1.18e-06
Seed ortholog88036.EFJ23060
Hectar predicted targeting categoryother localisation
TranscriptId351807
TrackFilteredModels1
ProteinId351485
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351485gene_13531Tribonema minus UTEX_B_3156 geneContig_91 560833..565632 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351485Trimin1|351485|estExt_Genemark1.C_Ctg_910047Tribonema minus UTEX_B_3156 polypeptideContig_91 560833..565632 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13531_5exon_13531_5Tribonema minus UTEX_B_3156 exonContig_91 560833..561172 -
exon_13531_4exon_13531_4Tribonema minus UTEX_B_3156 exonContig_91 562210..562377 -
exon_13531_3exon_13531_3Tribonema minus UTEX_B_3156 exonContig_91 563327..563532 -
exon_13531_2exon_13531_2Tribonema minus UTEX_B_3156 exonContig_91 564523..564604 -
exon_13531_1exon_13531_1Tribonema minus UTEX_B_3156 exonContig_91 565607..565632 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13531CDS_13531Tribonema minus UTEX_B_3156 CDSContig_91 565607..565632 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13531 ID=mRNA_13531|Name=jgi.p|Trimin1|351485|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=822bp|location=Sequence derived from alignment at Contig_91:560833..565632- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACTCCTTTGTCGGCATGGACAAGGTGTTTGACCTGCTACCGCGCGG
GGGCATGTTCTATCACGACTTTGTCAAAGGCTGCGGCGCACCGGGCGTCT
TGCAGGAGGCCAATGGCGATGCACTGGTGGTGCCTTCCGGCACGTCACAT
GCAAACATGGTTGCCGCAGCAGACGTGCCACTACTGGTACGCGACTTCTC
TCGCGAAACTGCGGAGCCGTACATCAAGTACGGCTTCGAAGTCTGCCACC
CTGAGAAGCTGCCCTCGCCGGTGTTTGAGCCTGGCGTCAACTACACGCTG
CCGGCGGAGATATCTGGCAGCGACTGGATCTATGCAGACTGGGTGTATGC
CAAGTCCAACGAGATCGTCGCACAGCTCAGAGCGGGTGCAGATGAAGTGG
CAGCCACGCCAGGCTCTTCCAAGATTGTGTGCGTGCAAGTGCGGCGCGGA
GACTTGGTGATAACACCCAGCATGAGGAGCAGGTATCCAGGGCTGGACGT
CCAAACGTCAGCGGAGGCCATACTCGACACGCTGCGACCAATTGTGCCAG
AGCAGTCCATGTTGTACATAGCCACCAATGAGCAGGATCCGCACTTCTTT
GACGGTCTGAACGCCCGATACCACGTTCGCACGCTCGACTACTTTCTGAC
GCCCCAAGAGCAGTCGCAGCTCTTGCCACCGTCGCTCACGCTATTGGACT
ACACGATTCTTCGGTCGTGCGATCAGCTGATCCCGACGTTTCCTGCTGTG
GACTCGAAGGGGGAGGGCAGTCACGGGGTCAGCTTGTACTCCCATTTGAG
AAACTCCCCGGGGCCAGGCTAG
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protein sequence of jgi.p|Trimin1|351485

>Trimin1|351485|estExt_Genemark1.C_Ctg_910047 ID=Trimin1|351485|estExt_Genemark1.C_Ctg_910047|Name=jgi.p|Trimin1|351485|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=274bp
MDSFVGMDKVFDLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSH
ANMVAAADVPLLVRDFSRETAEPYIKYGFEVCHPEKLPSPVFEPGVNYTL
PAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRG
DLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDPHFF
DGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAV
DSKGEGSHGVSLYSHLRNSPGPG*
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mRNA from alignment at Contig_91:560833..565632-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13531 ID=mRNA_13531|Name=jgi.p|Trimin1|351485|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4800bp|location=Sequence derived from alignment at Contig_91:560833..565632- (Tribonema minus UTEX_B_3156 )
ATGGACTCCTTTGTCGGCATGGACAAGTGAGTACCGCTTATTACGTTAAT
TTCTTTACACAACTGTCTGGCAGATTTTGGTTAAACTGTCACTTATCGAC
AGTTACAGCAGTTACAGCGCCAGCGTCCACGCAGGAGTACGGTACTCTAT
GCGGTTATCAGTCTGGCGTGTGGGTTTGTTATGCGGCTTGGGAACTGGTG
GCTGTGACGCTAACCCTAACCCTAAACCCTAACCCTAACGCAATGTGCCG
CAGGTCCACGGTCCTGCCCTGCCGGTGTTGATCGTCGTTCTGCAGAGCGT
TTTTCATGTCAAAAGACTGGTTTTCGGGTTGAGCAGGCATTGCTCTTCAG
ACATGTACATGCTTTCTATGTATTGTTGTGCAGGCTCAAAGACAGGCTGT
ACAAGCACCGCGAGGTAGAGTCCACAGGGTTAGGGTAGGTTAGGGTTATC
GTGTCTTGCGCACACCATGATTGCGCAGGGCCTCTTGAAGTACGTCAAGT
TATCGAAAGATCGCAAGCGCTTAAACATGTATCTGGTACAAACCGCAACT
GTTGCGACGTAGAGAGCTGCTGCTCACTAGCTTGTTGCTCCACACCGACA
GAGGTAGACATCAAAGTGACCAGTGCAACAGAAGATCGACGCCAGTCGTG
TGCTGCTAGAACACAATGTTTTATGGTCTGTGTACCGGCAAATGTAGCTG
CAGTAACCGTCAAGTGTGCAAATGGCAATGAGCATGTGACCTCCGCAAGA
CAGGCCATGTCCTCTGCAGTCTCACCTCACTTGCTAGCACTCGCACTTCA
TGTTGGCACCGCTGTGCAGCCTCCTCCTGCCTTGATAACATGACATGCAT
TGACGCAGGTCAGGTTGAGGATAATCAGGTATTCTCATTCACCTTCTACT
TCAAAGCATGGTTGTTTTGCTAGCAAACTCATCAGAAGCTGGTATCTGCA
TCTTGCGCTGATCTGCAGAGTGCATTGTGGAGGTGTGTACGATGTGGAAG
TGCCCTGGTCTTCCTGGTACAACCACAGGGTGTTTGACCTGCTACCGCGC
GGGGGCATGTTCTATCACGACTTTGTCAAAGGCTGCGGCGCACCGGGCGT
CTTGCAGGAGGTATGTAGATACATGTGATTCCATGCCCCACACTGCAAAC
TACAGACACTGATGCAGAAGCCAGTTGTTGAAGCCAGTTGTTGCTGTCCC
TTTAACGCAAACCCTAGAGCGCGCGCACACCTGCAAGACCCAAATGGAGG
GCTCAGTTGGCATTGCATGTTGTTTCTACAACGAATATGTGCAGTGTCCA
ACAGAAGAGCTCGTAAAAGCAATGAGCCTTCAACTGAGTGTGGATGCACT
GACTGAAGGTTAGGGCAACACTTCCAGCGATTGCCTTGGCCAAAGTGCAT
GTATGCTGTTTTTGTGCATGTAAATAGCTGTGTCAGTGGTTGCGGAGGTC
ATTATTCACTCTGATAATGTTATGTGCAGGGATTCGATTGTGAACACACA
GGGCGTATTGATCTGAGGGTAACGTATCAGCATGTTACTTTATCCACATT
GTAATGCAGCCATGCATTGTTTGTTTGGTTGAAGCACGTGCAGAGTGCCA
CACTACACTCACTGCATCTGTGACTGCTATGCCACACTCTGATGGCGACG
CTTGCATACCTGTTGCCTACCCTACTTTTCAATTGAGAGTGCTACATCTC
ATGTCAAAGCTTGCAGTTCAGCGTGTCGGCGCTCTGCTGCATGTTCCAGG
GCAGTCGTGTATCGCCACCGTGGGCACGCACACCCTTGCTGAGCACTGTG
CCACAACCGCACCGCTGCTGAGCACACTGCTGACAGCGTGCCAGAGGTGG
ACAACCAAGCAGCCAAGCAGACACAACTCACGAGAGCATGTGTTGCTACA
GAAGAAGTGAATTAGGAACACGATGCAAATCCTGTCTGAGGTGGCACGTC
AGTGCTCACCAAGGACCCAAACCTCAACATGTGCTGAGCTTTGCTCAACT
GCAAAATGGCACGTCAGGACAATCACACTTGTTCTGTAGGTCTTCAACAG
TACCTACCCACCCTTACCTCATTGTCACCGCCATCACACACACCCTGCAG
GCCAATGGCGATGCACTGGTGGTGCCTTCCGGCACGTCACATGCAAACAT
GGTTGCCGCAGCAGACGTGCCACTACTGGTACGCGACTTCTCTCGCGAAA
CTGCGGAGCCGTACATCAAGTACGGCTTCGAAGTCTGCCACCCTGAGAAG
CTGCCCTCGCCGGTGTTTGAGCCTGGCGTCAACTACACGCTGCCGGCGGA
GATATCGTAAGTGTATAGGTGCATTTTTGCACAGAGGGACTGCAAAGTTT
ATTGAACACAAACTTATCTTCTAGCTTTACCCTACACTTTGATCGTTCAG
ATTACGTAAGTATCATAAGCCAAGAACATAGAAGTATATATATACATACA
TAACTGTTTCAAATGTACCTCAATATGTGCCGCATCGTGTTGCGCTCTGT
GGTAGTGGAAACGGGTCGTGCACTGAATGTGTTGCAGCAGAGAGAGGGTG
CTCTGTAGTGTTCTGTACTGGTGTGCTGATGATACAGAGGCAGCTCTACT
GACAAAACGAAGCTAGGGTTAGGGTCAGGGTTGATACCGGATGAACGCTG
ATGTCACCTAACCCTAAGTTGAGCATGCGTGCATGTGCGCAGCACGCATA
TCCGGTGCAATGCGGTCCAACGCAGTGCTGGAATGTGGCTGCAAGTGGCT
CAGAGACACGAATATTTAGTTTGAGGGTGGTGATGACTACAAAAAGGCGT
TGGAGTTGGAACGGAGTCGTCTGTCTGTGACTCCGCTCCGACTCCGCTCC
GGCCGCGCTCCGACTCCGCTCCGGCCGGAGCGGAGTCGAAGTCGTTCGGG
CCGGCTCATTGCTCCTTGGAGGAGTTGGAGTCAGAGTCGTACGACGAGTG
GTGCCAGCTCCCTGGAGTGGAGTCGGAGTGGTAGGCCCACGAGTCACGGC
CCCGCGGAGCGGAGTCGGAGTCGTTCAGGCTTTGAGGAGTGGTGACAACC
TCCAGCCCAACACTGACATGTGCTCCGCCTGTTTCCTCCACTCTGCACGC
AATACCATTGGCTACAGTGTGCCTGCTGCAGACTTCACGTCCAACCTGTT
TGCCCTCAATCTCCGGCCTCTGACTCGACCTCGACCTCTTGATACTTCAA
TTTGAAGTGCGCAAGCCTCACATCCACGTTGCCGGTGTTGCTGCTCCCAT
CGCAGTGGCAGCGACTGGATCTATGCAGACTGGGTGTATGCCAAGTCCAA
CGAGATCGTCGCACAGCTCAGAGCGGGTGCAGATGAAGTGGCAGCCACGC
CAGGCTCTTCCAAGATTGTGTGCGTGCAAGTGCGGCGCGGAGACTTGGTG
ATAACACCCAGCATGAGGAGCAGGTGCGCCTTGCCATTCATGAATTCATT
TGCAGGACGATGTCCATGCATGAATGGATGCATCAATGCACAACGCCATG
CAGGAGTGAATAAGGTGGCTCTAGTCCATTTGCTGATGACAGTGAACTTG
AGTGCCTATCACCTACTATTTAAGGGGTTACACGTGCCACGTGTGGGGTA
AAGGTGAGGAGTGGCTTGTGCTATGTTTTCCAGTATTTTGTTAGATCAAA
ACAAGGAGATACAGCATGCCTCTCACCGCTAATGATCGGTCGATGACCAT
ATCCTCCTGGCTGACAGCCGCGCCCACTTCATTTAATGGGCAATGTGCAC
ACGGGCCTTGATTTAATGGTGCCTGAACCTCTGCCAGTGGCGCATGACGC
GTGATTACGCATGTGTCCACCACAATCCTTCCATTGCTGCGGGCATTGGC
GTCTGAGTGACCAGTGTTGCCTGCCTGAGCAGTGTTGCCTGACGGCCTTC
AGCTGGTTTCTCATGACCTTTGAATGATGGTCTGCGACGTAGGCGGGCAC
CACACTCAGGGTATGTAGGGGTATGGTTAGGATTGGGGCCGGGATGAGGG
CTAGGGGACCTAACTCTAACCATAACACGAGACAGCATGGTCAGATCACG
CGCAATTCCGAGGTTTGCACTTGTTGACACTGTCGTTGAGCAAATGGCTG
TATGGAAAGTAAAGCGCTAGAGGCAAGGGCGAACCTCTACGCCTCCTGTT
AACCCCCCGATAGGTGCCTTTGTCACACTTAGGGGTTCCATCAGCAAATG
AGTACACGTTGCCTGGGCTGGTCATGATTGGCCACTCGCACTTACAGGCT
CAACAGCGTACTGCTGTGTTGAATCCAGGTCAGCCGTCCTTTAGCGCACT
CATGCATTCACCGAAGCGCAACACCCGCCTCCTGCCTGAAATGGTCATTG
AGCAATTTGCACTCGACGGTGCGCTGACATGAGCACAATCATTGCTGCAG
TGTGAGTTCTGACTGTGCCCACTCACAACAACACCCCCTCTGGGGTTCCC
CGTTACGCAGGTATCCAGGGCTGGACGTCCAAACGTCAGCGGAGGCCATA
CTCGACACGCTGCGACCAATTGTGCCAGAGCAGTCCATGTTGTACATAGC
CACCAATGAGCAGGATCCGCACTTCTTTGACGGTCTGAACGCCCGATACC
ACGTTCGCACGCTCGACTACTTTCTGACGCCCCAAGAGCAGTCGCAGCTC
TTGCCACCGTCGCTCACGCTATTGGACTACACGATTCTTCGGTCGTGCGA
TCAGCTGATCCCGACGTTTCCTGCTGTGGACTCGAAGGGGGAGGGCAGTC
ACGGGGTCAGCTTGTACTCCCATTTGAGAAACTCCCCGGGGCCAGGCTAG
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Coding sequence (CDS) from alignment at Contig_91:560833..565632-

>mRNA_13531 ID=mRNA_13531|Name=jgi.p|Trimin1|351485|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=822bp|location=Sequence derived from alignment at Contig_91:560833..565632- (Tribonema minus UTEX_B_3156 )
ATGGACTCCTTTGTCGGCATGGACAAGGTGTTTGACCTGCTACCGCGCGG
GGGCATGTTCTATCACGACTTTGTCAAAGGCTGCGGCGCACCGGGCGTCT
TGCAGGAGGCCAATGGCGATGCACTGGTGGTGCCTTCCGGCACGTCACAT
GCAAACATGGTTGCCGCAGCAGACGTGCCACTACTGGTACGCGACTTCTC
TCGCGAAACTGCGGAGCCGTACATCAAGTACGGCTTCGAAGTCTGCCACC
CTGAGAAGCTGCCCTCGCCGGTGTTTGAGCCTGGCGTCAACTACACGCTG
CCGGCGGAGATATCTGGCAGCGACTGGATCTATGCAGACTGGGTGTATGC
CAAGTCCAACGAGATCGTCGCACAGCTCAGAGCGGGTGCAGATGAAGTGG
CAGCCACGCCAGGCTCTTCCAAGATTGTGTGCGTGCAAGTGCGGCGCGGA
GACTTGGTGATAACACCCAGCATGAGGAGCAGGTATCCAGGGCTGGACGT
CCAAACGTCAGCGGAGGCCATACTCGACACGCTGCGACCAATTGTGCCAG
AGCAGTCCATGTTGTACATAGCCACCAATGAGCAGGATCCGCACTTCTTT
GACGGTCTGAACGCCCGATACCACGTTCGCACGCTCGACTACTTTCTGAC
GCCCCAAGAGCAGTCGCAGCTCTTGCCACCGTCGCTCACGCTATTGGACT
ACACGATTCTTCGGTCGTGCGATCAGCTGATCCCGACGTTTCCTGCTGTG
GACTCGAAGGGGGAGGGCAGTCACGGGGTCAGCTTGTACTCCCATTTGAG
AAACTCCCCGGGGCCAGGCTAG
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