Trimin1|351485|estExt_Genemark1.C_Ctg_910047 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351485
Unique NameTrimin1|351485|estExt_Genemark1.C_Ctg_910047
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length274
Homology
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835YS17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS17_9STRA)

HSP 1 Score: 558 bits (1437), Expect = 5.380e-201
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0
Query:    1 MDSFVGMDKVFDLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSRETAEPYIKYGFEVCHPEKLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDPHFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSLYSHLRNSPGPG 273
            MDSFVGMDKVFDLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSRETAEPYIKYGFEVCHPEKLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDPHFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSLYSHLRNSPGPG
Sbjct:    1 MDSFVGMDKVFDLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSRETAEPYIKYGFEVCHPEKLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDPHFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSLYSHLRNSPGPG 273          
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A836CEQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ0_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.900e-60
Identity = 118/262 (45.04%), Postives = 164/262 (62.60%), Query Frame = 0
Query:    9 KVFDLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSR-----ETAEPY----IKYGFEVCH--PEKLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDP-HFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSH 258
            KVFDLLP GGM YH FV+ CGAPGVLQ+A GD +++PSG SHA+MVA A  PLLVR++ +     E A P      K+G +VCH  PE+      E G++Y+LP ++  S W YA WVY   + I++ +R  A+  AA+  ++ +VC+ VRRGD + +   + RYP LD +TS E IL  +   VP  S+LYIATN++DP  FF+ L A Y   TL +F       + LP S+ L+DY ++  CD+LIP F + +S+G   H
Sbjct:   45 KVFDLLPAGGMLYHQFVQKCGAPGVLQQALGDVVIMPSGASHADMVAQAGAPLLVREWDQREQQLEPATPLDEQQAKFGLQVCHKKPEQQ-----EEGLDYSLPDKL-WSKW-YAKWVYRAVDSIMSDMRQAAELNAAS--NALVVCLHVRRGDKITSRIGQFRYPNLDYETSPEGILKAIELFVPHGSVLYIATNQEDPVAFFEPLQAHYTAVTLYHFPKRILPHKYLPSSMALVDYEVMDKCDRLIPKFASEESRGFEQH 297          
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835ZNY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNY4_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.680e-53
Identity = 123/310 (39.68%), Postives = 162/310 (52.26%), Query Frame = 0
Query:    9 KVFDLLPRGGMFYHDFVKGCGAPGVLQE----------------------------------------------------ANGDALVVPSGTSHANMVAAADVPLLVRDFSRETA-EPYIKYGFEVCH--PEKLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDP-HFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSL 262
            K+FDLL  GGM YH FV+GCGAPGVLQE                                                    A GD  ++PSG+SHA MVA A VPLLVR++ R     P  K+GF+VCH  PE       E GV+YTLP ++  + W YA WVY   + I+  ++   +   +T   + +VC+ VRRGD +     + RYP LD +TS E I+ T+ P V   S+LYIATN+QDP  FF  L ARY   TL +F       + LP S+ ++DY ++  CD+LIPTF + +SKG   H VSL
Sbjct:  210 KLFDLLSAGGMLYHQFVQGCGAPGVLQEVRISLPYVLTHDSDIHLLLNRLLRAFDHHSNARRTLPHWFVVVGGASKALQEAAGDVAIMPSGSSHAEMVAQAGVPLLVREWDRRVKLTPEAKFGFQVCHQKPEHR-----EEGVDYTLPKKL-WNVW-YAKWVYRIVDGIMRDMKK--ETALSTTKDAMVVCLHVRRGDKLTIEVDKERYPNLDYETSPEGIMATIEPFVSHGSVLYIATNQQDPVAFFAPLQARYTAMTLYHFPKRIPAHRYLPSSMAMVDYEVMDKCDRLIPTFASEESKGFPQH-VSL 509          
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835Z745_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z745_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.220e-49
Identity = 116/279 (41.58%), Postives = 152/279 (54.48%), Query Frame = 0
Query:   14 LPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFS-----------RETAEPYI-KYGFEVCH-PEKL----PSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQL----RAGADEVAATPG---------------SSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDP-HFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRS-CDQLIPTFPAVDSKG 254
            L RGGMFYH+F +GCGAPGVL E +GDA+V+PSG +HA M+A AD PLLVR +            R   + +  ++GF+VCH PE+     PS   EPGV+Y LP  I     IY++WVY  +  I   L    RA  D  AA                  +  +VC+ VRRGD +  P++  +YP LD  TS   I  T+   VP+ S L+IATNE+DP  FF  L A Y V +L ++ T       L  +L L+DYTIL   C  LIPTF    ++G
Sbjct:  392 LDRGGMFYHEFARGCGAPGVLPEESGDAVVMPSGATHAEMLAHADAPLLVRQWQYDQGDYAAAALRSAPDAFTSRFGFQVCHRPERARADYPSVFKEPGVDYALPPGIWSR--IYSEWVYRTAKVIAGDLWRTTRARGDAAAAAAAVDSAQHGAAPAAAAVTGMVVCLHVRRGDKITNPNVSKKYPDLDFDTSPAGIYRTISLYVPDGSTLFIATNERDPVAFFRPLEAHYRVTSLAHYPTILAPGAFLGSTLALVDYTILGGQCPLLIPTFTGETARG 668          
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A836CHA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA1_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.940e-49
Identity = 132/354 (37.29%), Postives = 176/354 (49.72%), Query Frame = 0
Query:    1 MDSFVGMDKVF-------DL-------------LPRGGMFYHDFVKGCGAPGVLQEANGDALV-------VPSGTSHANMVAAADVPLLVRDFSRE---------------TAEPYIK---------------------YGFEVCHPEKLPSP-----VFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAI---------------------LDTLRPIVPEQSMLYIATNEQDPH-FFDGLNARYHVRTL-DYF-LTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSL 262
            +DSF G+DK         D+             LP+GG+F+H+FV+GCGAPG+LQE +GD  V       VP   SHA+M+A A VPLLVR++                  +  P ++                     YG++VCH   +PS      V EPGV+Y++P  +      YADWVY+ +  ++  L+A    + A     ++VCV VRRGD+V  P MR+RYP LD  T AEAI                     L TL P VP+ ++LYIATNE+DP  +F  L ARY VR L DY  L       LLP SL L DY +L  C  +IPTF +  + G G  G+SL
Sbjct:  246 LDSFTGIDKTHIGGEYHADVPFTAWYNSNAMAGLPQGGLFWHEFVQGCGAPGILQEGSGDVAVGTGDVAVVPPSASHADMLAHAGVPLLVREWDASALRRSATTTASLTDSSGRPDMRGSVTTTMPPXXXXXXXXXXXXYGYQVCHRPDVPSARWPKVVSEPGVDYSMPEGLKSRP--YADWVYSTTRAMLDDLKAEGAALGA-----QVVCVHVRRGDMVRAPGMRARYPSLDRDTFAEAISICKHGAWXXXXXXXXXXXXILATLAPRVPQGTILYIATNERDPAAYFAPLAARYAVRALGDYVDLAAPPGRLLLPSSLALFDYAMLTRCPAVIPTFASEAASG-GFEGLSL 591          
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835ZJK4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJK4_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.310e-49
Identity = 109/259 (42.08%), Postives = 150/259 (57.92%), Query Frame = 0
Query:    9 KVFDLLPRGG-MFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSRETAEPYIKYGFEVCHPEKLPSPVFEPGVNYTLPAEISGSDWI---YADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDP-HFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSHGVSL 262
             VF  +  GG + YH+F + CGAPGVLQEAN D  ++PSG SH++M A A VPLLVR +  +  +P  KYG+ +C   +  +   E GV+YTLPA + G  +    YA WV   +  + A+L+  A   A     + +VC+ VRRGD +      ++YP L+ +TS E IL T+ P VP  S+LY+ATNE DP  +F+ L   Y V +L +F         L  SL L+DY IL  C + IPTF + D+KG   H VSL
Sbjct:    2 NVFIRVNTGGTVLYHEFARECGAPGVLQEANQDLAIMPSGASHSDMAAKAHVPLLVRSWD-QGLQPAEKYGYRICR-HRSAAAQSESGVDYTLPAGLGGRAYAPHAYAPWVDRMTARVWAELQKRAALNARE--DALVVCLHVRRGDKL----SYTKYPNLNYETSPEGILKTIEPHVPHGSVLYLATNEPDPVAYFEPLRKHYDVVSLAHFARLLSTDLYLLSSLGLVDYEILGKCQRTIPTFASEDAKGFKQH-VSL 251          
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835Z0A5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0A5_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.690e-45
Identity = 114/329 (34.65%), Postives = 158/329 (48.02%), Query Frame = 0
Query:    1 MDSFVGMDKV--------------------FDLLPRGGMFYHDFVKGCGAPGV-------------------------------LQEANG---------DALVVPSGTSHANMVAAADVPLLVRDFSRE----TAEPYIKYGFEVCHPE-----KLPSPVFEPGVNYTLPAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDPH-FFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTIL-RSCDQLIPTFPAVDSKGEGSH 258
            +DSF+GM ++                     +    G MFYHDFV+ CGAPGV                               L  A+G         D  ++PSG++HA+M A ADVPLLVR +  +       P  ++GF+VCHP      + P+   EPGV+Y+ P ++ G    YA WVY  +  I++ +          PG  KI C+ VRRGD V   S + RYP LD  TS E I  T++P +   S LY ATN++D   FF  L   Y VRTL+++       + L PSL L+DY +L   C  L+PTF + +S+G G H
Sbjct:  134 LDSFLGMSRIHADEDYNAEVPYPVWYSTKGLERARAGAMFYHDFVRDCGAPGVFHVLSSLVAVLSVCTXXXXXXXXXXVGGRGILATASGAATAAAAVPDVALMPSGSTHADMAARADVPLLVRHWDHDDRSNATRPAFRFGFQVCHPPETADARYPTGAREPGVDYSFPRKLWGKK--YAPWVYDMARYILSDMWKDKK-----PGL-KIACIHVRRGDKVELESQKQRYPNLDYDTSPEGIRRTIKPWLNPGSTLYFATNQKDAKAFFAPLEDEYIVRTLEHYSDVLPPEKFLSPSLALVDYAVLIGGCPTLLPTFVSEESRGFGPH 454          
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835ZIW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIW3_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.860e-22
Identity = 56/135 (41.48%), Postives = 75/135 (55.56%), Query Frame = 0
Query:  125 QLRAGADEVAATPGSSKIVCVQVRRGDLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQD-PHFFDGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAVDSKGEGSH 258
            +L     E  A    + + C+ VRRGD V     ++RYP LD +TS E IL T++P VP+ S+LYIATNE +   FF+ L  RY V TL +          L  SL ++DY IL  C Q+IPTF +  +KG   H
Sbjct:    3 RLALALQEAHAQHADAVLACLHVRRGDKVSRVGQQARYPNLDFETSPEGILQTIKPHVPQGSVLYIATNEPEVATFFEPLRERYSVFTLVHIPDILNPKDFLGSSLAMIDYEILDKCPQVIPTFNSEHTKGFEQH 137          
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Match: A0A835YIP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIP5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.940e-17
Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   12 DLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSHANMVAAADVPLLVRDFSRETAEPYIKYGFEVC 82
            D+LP G MFYHDFVKGCGAPGV  + N   +++P+  S  +M A A VPLLVRDF R T  P I++G++VC
Sbjct:   45 DVLPAGIMFYHDFVKGCGAPGVYAQTNDTTVIMPADASRGDMEAHAHVPLLVRDFER-TPAPTIRFGYQVC 114          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351485 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835YS17_9STRA5.380e-201100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEQ0_9STRA1.900e-6045.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZNY4_9STRA1.680e-5339.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z745_9STRA1.220e-4941.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHA1_9STRA2.940e-4937.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZJK4_9STRA3.310e-4942.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0A5_9STRA3.690e-4534.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIW3_9STRA1.860e-2241.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIP5_9STRA6.940e-1756.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 115..253
e-value: 3.9E-6
score: 28.7
NoneNo IPR availablePANTHERPTHR31469OS07G0633600 PROTEINcoord: 138..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_91contigContig_91:560833..565632 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351485mRNA_13531Tribonema minus UTEX_B_3156 mRNAContig_91 560833..565632 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351485|estExt_Genemark1.C_Ctg_910047 ID=Trimin1|351485|estExt_Genemark1.C_Ctg_910047|Name=jgi.p|Trimin1|351485|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=274bp
MDSFVGMDKVFDLLPRGGMFYHDFVKGCGAPGVLQEANGDALVVPSGTSH
ANMVAAADVPLLVRDFSRETAEPYIKYGFEVCHPEKLPSPVFEPGVNYTL
PAEISGSDWIYADWVYAKSNEIVAQLRAGADEVAATPGSSKIVCVQVRRG
DLVITPSMRSRYPGLDVQTSAEAILDTLRPIVPEQSMLYIATNEQDPHFF
DGLNARYHVRTLDYFLTPQEQSQLLPPSLTLLDYTILRSCDQLIPTFPAV
DSKGEGSHGVSLYSHLRNSPGPG*
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