mRNA_13527 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351482
Unique Name	mRNA_13527
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835YHH0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH0_9STRA)

HSP 1 Score: 860 bits (2222), Expect = 4.820e-310
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 2

Query:  272 MGGAPEMSDFQAHVLVGMSVVGAGIVLAGMCKVWGVQQVLLGALPLIVTIGAAYWLASCLDDRNDAEDKANEEQLQQAARPGAPSANYATVTYQTLSVRVRHHCSYTRRIRIVRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVPPGYGHAGAAAELRLGPEDNAVHTGVREVVRVNRNSATLKSGLTSGPEDIAAASGLDQDWQHVEVPTGLMKVPQPQGHVVATAKAVYATVAHGLFSHGKQFEHQQQLERETAAAVERALAWERRQLQKAAAIMAMLEGALLQHQLHQITTVNKGLAEMWRRQQQQQQLQCERDRAEGLAAELVQERERHQEEVRELQAQHDLAQTAAXXXXXXXXXXXXXLLLRDAAMAGLSPMAAQLQVALQQAQXXXXXELTAVAAAVEAQHLTITQELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTPAASAPPEAKPRSVLVTVPSFAD 1687
            MGGAPEMSDFQAHVLVGMSVVGAGIVLAGMCKVWGVQQVLLGALPLIVTIGAAYWLASCLDDRNDAEDKANEEQLQQAARPGAPSANYATVTYQTLSVRVRHHCSYTRRIRIVRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVPPGYGHAGAAAELRLGPEDNAVHTGVREVVRVNRNSATLKSGLTSGPEDIAAASGLDQDWQHVEVPTGLMKVPQPQGHVVATAKAVYATVAHGLFSHGKQFEHQQQLERETAAAVERALAWERRQLQKAAAIMAMLEGALLQHQLHQITTVNKGLAEMWRRQQQQQQLQCERDRAEGLAAELVQERERHQEEVRELQAQHDLAQTAAXXXXXXXXXXXXXLLLRDAAMAGLSPMAAQLQVALQQAQXXXXXELTAVAAAVEAQHLTITQELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTPAASAPPEAKPRSVLVTVPSFAD
Sbjct:    1 MGGAPEMSDFQAHVLVGMSVVGAGIVLAGMCKVWGVQQVLLGALPLIVTIGAAYWLASCLDDRNDAEDKANEEQLQQAARPGAPSANYATVTYQTLSVRVRHHCSYTRRIRIVRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVPPGYGHAGAAAELRLGPEDNAVHTGVREVVRVNRNSATLKSGLTSGPEDIAAASGLDQDWQHVEVPTGLMKVPQPQGHVVATAKAVYATVAHGLFSHGKQFEHQQQLERETAAAVERALAWERRQLQKAAAIMAMLEGALLQHQLHQITTVNKGLAEMWRRQQQQQQLQCERDRAEGLAAELVQERERHQEEVRELQAQHDLAQTAAXXXXXXXXXXXXXLLLRDAAMAGLSPMAAQLQVALQQAQXXXXXELTAVAAAVEAQHLTITQELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTPAASAPPEAKPRSVLVTVPSFAD 472

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836CJD6_9STRA (Bestrophin, RFP-TM, chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD6_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.590e-51
Identity = 106/140 (75.71%), Postives = 112/140 (80.00%), Query Frame = 2

Query: 1472 VAAAVEAQHLTITQELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTPAASAPPEAKPRSVLVTVPSFAD*QQRVMQLLAGMAAPHQQVISCERVDNGGPADAPLGTWRVKLASGMLCRRLQAYTGTVKAHCEELGSL 1891
            VAAA   QH+   +E  DLRQQ QSL  EY W RVRRQ+ DMSL K   PAA  P EAK RSVLVTVP FAD Q RV+QLLAGMA   Q++ISCERVDNGGPADAPLGTWRVKLASGMLCRRLQAYTGTVKAHCEELGSL
Sbjct:  100 VAAAATEQHMITIRERHDLRQQLQSLADEYKWERVRRQVTDMSLIKGPAPAAGVPAEAKARSVLVTVPRFADHQLRVIQLLAGMAVLDQKMISCERVDNGGPADAPLGTWRVKLASGMLCRRLQAYTGTVKAHCEELGSL 239

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836CBP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP3_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.270e-41
Identity = 93/123 (75.61%), Postives = 101/123 (82.11%), Query Frame = 2

Query: 1514 ELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTPAASAPPEAKPRSVLVTVPSFAD*QQRVMQLLAGMAAPHQQVISCERV--DNGGPADAPLGTWRVKLASGMLCRRLQAYTGTVKAHCE 1876
            +LDDLRQQHQSL  E+TW RVRRQ+ DMSL K+   AAS PPEAKPR VLVTVP F D QQRVMQLLAGMAAPHQQVISCERV  D+GGPADA LGTWRVK+ASGML RRLQ +T  VK H +
Sbjct:    6 KLDDLRQQHQSLDDEFTWERVRRQVTDMSLTKEPESAASVPPEAKPRCVLVTVPRFVDKQQRVMQLLAGMAAPHQQVISCERVLVDDGGPADA-LGTWRVKVASGMLGRRLQEHTRIVKRHLQ 127

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835Z8K6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K6_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 9.740e-19
Identity = 68/151 (45.03%), Postives = 78/151 (51.66%), Query Frame = 2

Query:  509 RPGAPSANYATVTYQTLSVRVRH-HCS-------YTRRIRIV---------------RRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVPPGYGHAGAAAELRLG---PEDNAVHTGVREVVRVNRNSATLKSGLTSGPEDIAAASGLDQD 883
            +PGAP+ANYATVTYQTLSVR RH H S       Y  R R V               R+VVFFGKAEFGSGS GP+PRK LIRHLACL P   G      E R     P+D A    +R     +R    + SGL    E       +D+D
Sbjct:   24 KPGAPAANYATVTYQTLSVRARHYHTSRILTFDAYRARERAVARVARDILGPPDPSVRKVVFFGKAEFGSGSRGPMPRKRLIRHLACLAPVVLGD-----EFRTSITCPQDRAP---LRRSALGSRVFCCVNSGLDVPEESRCNVKAIDRD 166

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835YQT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.040e-18
Identity = 55/92 (59.78%), Postives = 60/92 (65.22%), Query Frame = 2

Query:  509 RPGAPSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVP 709
            RPGAP+ANYATVTYQTLSVR RH+ S+TRRIR                          VR+VVFFGKAEFGSGS GP+PRK LIRHLA L P
Sbjct:  198 RPGAPAANYATVTYQTLSVRARHYLSHTRRIRTFDAYRARERAVAWVARDILGPPDPSVRKVVFFGKAEFGSGSRGPIPRKRLIRHLASLAP 289

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836CHE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE2_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.170e-15
Identity = 54/112 (48.21%), Postives = 63/112 (56.25%), Query Frame = 2

Query:  458 RNDAEDKANEEQLQQAA---RPG-APSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLV 706
            R D + +A E Q  +     RPG A +ANYA VTY TLSVR RH+ ++ RR+R                          V RVVFFGKAEFGSGS GP+PRK LIRHLACL 
Sbjct:   25 RRDPQFQAAEAQFTEQTSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLA 136

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836CCS7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 4.020e-14
Identity = 47/91 (51.65%), Postives = 54/91 (59.34%), Query Frame = 2

Query:  509 RPGAPSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLV 706
            RPGA S++Y  VTYQTL +R RHHCS  RR+R                          VRRVVFFGKAEFGSGS GP+P K LIR ++CLV
Sbjct:   16 RPGA-SSDYDVVTYQTLVLRARHHCSCERRMRTTTAYHARERAVARAARDIIGPRDPTVRRVVFFGKAEFGSGSRGPIPCKRLIRQISCLV 105

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835Z5K2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K2_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.470e-14
Identity = 54/113 (47.79%), Postives = 64/113 (56.64%), Query Frame = 2

Query:  455 DRNDAEDKANEEQLQQAA---RPG-APSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLV 706
            +R D + +A E Q  +     RPG A +ANYA VTY TLSVR RH+ ++ RR+R                          V RVVFFGKAEFGSGS GP+PRK LIRHLACL 
Sbjct:  534 NRRDPQFQAAEAQFTEQTSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLA 646

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836C8P7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P7_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.920e-14
Identity = 54/112 (48.21%), Postives = 63/112 (56.25%), Query Frame = 2

Query:  458 RNDAEDKANEEQLQQAA---RPG-APSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLV 706
            R D + +A E Q  +     RPG A +ANYA VTY TLSVR RH+ ++ RR+R                          V RVVFFGKAEFGSGS GP+PRK LIRHLACL 
Sbjct:  488 RRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLA 599

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835YPN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.070e-12
Identity = 44/93 (47.31%), Postives = 51/93 (54.84%), Query Frame = 2

Query:  509 RPG-APSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVP 709
            RPG A +AN+A VT   L +R RHHC++ RR+R                          VR V FFGKAEFGSGS  P+PRK  IRHLACL P
Sbjct:   72 RPGPATTANFAAVTDSMLFMRTRHHCTWERRMRSFNTYRGRERAVARVARDIIGPRKPQVRHVTFFGKAEFGSGSRNPIPRKRFIRHLACLEP 164

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836CDU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU2_9STRA)

HSP 1 Score: 219 bits (558), Expect = 9.010e-68
Identity = 116/128 (90.62%), Postives = 121/128 (94.53%), Query Frame = 3

Query:  231 LRHRPLRQQQQEDGKEDYVHDSSETRSCLRLSKYQRVNDGYGTEATASASESVSSGGGTXXXXISSWGASADAYGGGGARHALWQIHVNPAAAADCCNGADGSGHSSGAGHIGCVASHTGCCAGSCTG 614
            ++H      +QEDGKED+VHDS+ETRSCLR SKYQRVNDGYGTEATASASESVSSGGGTXXXXISSWGASADAYGGGGARHALWQIHVNPAAAADCCNGADGSGHSSGAGHIGCVASHTGCCAGSCTG
Sbjct:    1 MQHTACDSAKQEDGKEDHVHDSAETRSCLRPSKYQRVNDGYGTEATASASESVSSGGGTXXXXISSWGASADAYGGGGARHALWQIHVNPAAAADCCNGADGSGHSSGAGHIGCVASHTGCCAGSCTG 128

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836CG11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG11_9STRA)

HSP 1 Score: 190 bits (482), Expect = 8.600e-52
Identity = 157/279 (56.27%), Postives = 163/279 (58.42%), Query Frame = 1

Query:   19 LTIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFLFSLFVCRTMRLQVQQSEPAIAAD*AKPVPDFVIGLCGNSNKRMGKKI---------MC-----------------------------------------------------------MTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPS 651
            LTID PA+KKSMGKGKGRA NLNDPLPTSIPLPKELTRMFL SLFVCRTMRLQVQQSE   AAD AKPVPDFVIGLCGNSNKRMGKK          MC                                                            T   Q  +C  PS                          XXXXXXXXXXXXT+  GGAHAMP GK MLILQQRQTAAMEQMAAATXXXXXXXXXXXXXX  VLAH+QGKQDKT+A+SAPS
Sbjct:  898 LTIDSPANKKSMGKGKGRAGNLNDPLPTSIPLPKELTRMFLVSLFVCRTMRLQVQQSESTKAADRAKPVPDFVIGLCGNSNKRMGKKTFTNILTKLGMCHFALARWGPYSIRNQWVSDMFMQAHNIEVDMGRGAAQEYLANAMKDIHSSLDAAITHYNQTLRIQYASCLRPSKYQRVNDGYGTEATASASESVSSGGGXXXXXXXXXXXXTYG-GGAHAMPLGKDMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXXXVLAHIQGKQDKTDAASAPS 1175

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835Z640_9STRA (Uncharacterized protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z640_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.640e-49
Identity = 153/279 (54.84%), Postives = 161/279 (57.71%), Query Frame = 1

Query:   19 LTIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFLFSLFVCRTMRLQVQQSEPAIAAD*AKPVPDFVIGLCGNSNKRMGKKI---------MC-----------------------------------------------------------MTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPS 651
            LTID P +KKSMGKGKG+A NLN PLPTSIPLPKELTRMFL SLFVCRTMRLQVQQSE   AAD AKPVPDFVIGLCGNSN+RMGKK          MC                                                            T   Q  +C  PS                          XXXXXXXXXXXXT+  GGAHAMP GK MLILQQRQTAAMEQMAAATXXXXXXXXXXXXXX  VLAH+QGKQDKT+A+SAPS
Sbjct:  900 LTIDSPTNKKSMGKGKGKAGNLNGPLPTSIPLPKELTRMFLVSLFVCRTMRLQVQQSESTKAADRAKPVPDFVIGLCGNSNRRMGKKTFTNILTKLGMCHFAIPRWGPYSIRNQWVSDMFLQAHNIEVTKGMAKAQEYLANAMHDIHSSLDAAITNYNQTLNIQYASCLRPSKYQRVNDGYGTEATASASESVSSGGGXXXXXXXXXXXXTYG-GGAHAMPLGKDMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXXXVLAHIQGKQDKTDAASAPS 1177

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836C850_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C850_9STRA)

HSP 1 Score: 153 bits (387), Expect = 6.040e-44
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1

Query:  268 MGKKIMCMTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPSVSTAPSTAASPITK 693
            MGKKIMCMTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPSVSTAPSTAASPITK
Sbjct:    1 MGKKIMCMTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQGKQDKTNASSAPSVSTAPSTAASPITK 142

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835Z0H7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0H7_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.360e-39
Identity = 114/244 (46.72%), Postives = 118/244 (48.36%), Query Frame = 1

Query:   19 LTIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFLFSLFVCRTMRLQVQQSEPAIAAD*AKPVPDFVIGLCGNSNKRMGKKI---------MC-----------------------------------------------------------MTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAAT 546
            LTID P +KKSMGKGKGRA NLN PLPTSIPLPKEL  MFL SLFVCRTMRLQVQQSE   AAD AKPVPDFVIGL GNSN+RMGKK          MC                                                            T   Q  +C  PS                          XXXXX       T+  GG HAMPCGK MLILQQRQTAAMEQMAAAT
Sbjct:  766 LTIDSPTNKKSMGKGKGRAGNLNGPLPTSIPLPKELICMFLISLFVCRTMRLQVQQSESTKAADRAKPVPDFVIGLYGNSNRRMGKKTFTNILTKLGMCHFAIPRWGPYSIRNQWVSDMFLQAHNIEVTRGMAKAQEYLANAMHDIHSSLDAAITNYNQTLNIQYASCLRPSKYQRVNDGYGREATASASDSVSSGGGXXXXXISSWGADTYG-GGTHAMPCGKDMLILQQRQTAAMEQMAAAT 1008

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835YQ45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ45_9STRA)

HSP 1 Score: 150 bits (378), Expect = 7.710e-38
Identity = 117/244 (47.95%), Postives = 121/244 (49.59%), Query Frame = 1

Query:   19 LTIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFLFSLFVCRTMRLQVQQSEPAIAAD*AKPVPDFVIGLCGNSNKRMGKKI---------MC-----------------------------------------------------------MTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAAT 546
            LTID P +KKSMGKGKGRA NLN PLPTSIPLP ELTRMFL SLFVCRTMRLQVQQSE    AD A+ VPDFVIGLCGNSN+RMGKK          MC                                                            T   Q  +C  PS                           XXXXXXXXXXX    G  HAMPCGK MLILQQRQTAAMEQMAAAT
Sbjct: 1337 LTIDSPTNKKSMGKGKGRAGNLNGPLPTSIPLPTELTRMFLVSLFVCRTMRLQVQQSESTKPADRARAVPDFVIGLCGNSNRRMGKKTFTNILTKLGMCHFAIPRWGPCSIRNQWVSDMFLQAHNIEVTRGMAKAQEYLTNAMHDISSSLDAAITNYNQTLNIQYASCLRPSKYQRVNDGYGREATASASESVSSGGGTXXXXXXXXXXXXXXXG-THAMPCGKDMLILQQRQTAAMEQMAAAT 1579

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835ZCY5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.390e-36
Identity = 65/70 (92.86%), Postives = 67/70 (95.71%), Query Frame = 1

Query:    1 MALLSELTIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFLFSLFVCRTMRLQVQQSEPAIAAD 210
            M L++  TIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFLFSLFVCRTMRLQVQQSEPAIAAD
Sbjct:    1 MTLIACATIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFLFSLFVCRTMRLQVQQSEPAIAAD 70

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836CBE3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBE3_9STRA)

HSP 1 Score: 125 bits (313), Expect = 9.810e-31
Identity = 88/148 (59.46%), Postives = 92/148 (62.16%), Query Frame = 3

Query:   18 AHHRLARRQEVHGEGQREGLQPQRPPPHFHPTAKGADAHVPVQPLRVPYHAAASPAERARHSR*LSKACARLRHRPLRQQQQEDGKEDYVHDSSETRSCLRLSKYQRVNDGYGTEATASASESVSSGGGTXXXXISSWGASADAYGGG 461
            A+HRLARRQEVHGEGQREGLQPQRP                  P  +P                L K   R+        QQEDGKED+VHDSSETRSCLR SKYQRVNDGYGTEATASASESVSSGG TXXXX   WG  AD YGGG
Sbjct:    9 ANHRLARRQEVHGEGQREGLQPQRP-----------------LPTSIP----------------LPKELTRMF------LQQEDGKEDHVHDSSETRSCLRPSKYQRVNDGYGTEATASASESVSSGGSTXXXXXXXWG--ADTYGGG 115

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835Z5U2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U2_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.040e-25
Identity = 105/198 (53.03%), Postives = 109/198 (55.05%), Query Frame = 1

Query:   22 TIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFLFSLFVCRTMRLQVQQSEPAIAAD*AKPVPDFVIGLCGNSNKRMGKKIMCMTAPKQDRACACPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHTVGGAHAMPCGKYMLILQQRQTAAMEQMAAATXXXXXXXXXXXXXXAAVLAHVQG 615
            TIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFL           Q +  +     D A                             + R+C  PS                       XXXXXXXXXX           AHAMPCGKYMLILQQRQTAAMEQMAAATXXX XXXXXXXX  AAVLAHVQG
Sbjct:  856 TIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFL-----------QQEDGKEDHVHDSA-----------------------------ETRSCLRPSKYQRVIDGYGTEATASASESVSSXXXXXXXXXX-----------AHAMPCGKYMLILQQRQTAAMEQMAAATXXXQXXXXXXXXTLAAVLAHVQG 1002

[Close]

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835YLN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN4_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.370e-19
Identity = 53/87 (60.92%), Postives = 62/87 (71.26%), Query Frame = 1

Query:   19 LTIDLPADKKSMGKGKGRACNLNDPLPTSIPLPKELTRMFLFSLFVCRTMRLQVQQSEPAIAAD*AKPVPDFVIGLCGNSNKRMGKK 279
            LTID P +KK+ G+ KGRA +LNDPLPTSIPLP  LTRM+L  LFVCRTMR+  QQ   + A      VPD +IGL GNSNK +G K
Sbjct:  769 LTIDDPTNKKTAGRTKGRAGHLNDPLPTSIPLPPGLTRMYLAVLFVCRTMRMLWQQQFTSCAD---ALVPDRIIGLAGNSNKLLGAK 852

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351482 vs. uniprot
BLAST of jgi.p|Trimin1|351482 vs. uniprot

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14


Match Name	E-value	Identity	Description
A0A835YHH0_9STRA	4.820e-310	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CJD6_9STRA	2.590e-51	75.71	Bestrophin, RFP-TM, chloride channel-domain-contai...	[more]
A0A836CBP3_9STRA	3.270e-41	75.61	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z8K6_9STRA	9.740e-19	45.03	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YQT5_9STRA	1.040e-18	59.78	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CHE2_9STRA	2.170e-15	48.21	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CCS7_9STRA	4.020e-14	51.65	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835Z5K2_9STRA	5.470e-14	47.79	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C8P7_9STRA	6.920e-14	48.21	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YPN9_9STRA	1.070e-12	47.31	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

BLAST of jgi.p|Trimin1|351482 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16


Match Name	E-value	Identity	Description
A0A836CDU2_9STRA	9.010e-68	90.63	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CG11_9STRA	8.600e-52	56.27	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z640_9STRA	1.640e-49	54.84	Uncharacterized protein n=4 Tax=Tribonema minus Ta...	[more]
A0A836C850_9STRA	6.040e-44	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835Z0H7_9STRA	1.360e-39	46.72	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YQ45_9STRA	7.710e-38	47.95	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZCY5_9STRA	1.390e-36	92.86	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A836CBE3_9STRA	9.810e-31	59.46	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z5U2_9STRA	1.040e-25	53.03	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YLN4_9STRA	1.370e-19	60.92	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_91	contig	Contig_91:530753..536727 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351482\|estExt_Genemark1.C_Ctg_910044
Hectar predicted targeting category	other localisation
TranscriptId	351804
Track	FilteredModels1
ProteinId	351482

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351482	gene_13527	Tribonema minus UTEX_B_3156	gene	Contig_91 530753..536727 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351482	Trimin1\|351482\|estExt_Genemark1.C_Ctg_910044	Tribonema minus UTEX_B_3156	polypeptide	Contig_91 531024..536307 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13527_1	exon_13527_1	Tribonema minus UTEX_B_3156	exon	Contig_91 530753..531262 +
exon_13527_2	exon_13527_2	Tribonema minus UTEX_B_3156	exon	Contig_91 533504..533599 +
exon_13527_3	exon_13527_3	Tribonema minus UTEX_B_3156	exon	Contig_91 533676..533855 +
exon_13527_4	exon_13527_4	Tribonema minus UTEX_B_3156	exon	Contig_91 534026..534070 +
exon_13527_5	exon_13527_5	Tribonema minus UTEX_B_3156	exon	Contig_91 534951..535028 +
exon_13527_6	exon_13527_6	Tribonema minus UTEX_B_3156	exon	Contig_91 535419..535443 +
exon_13527_7	exon_13527_7	Tribonema minus UTEX_B_3156	exon	Contig_91 535552..536727 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_13527	UTR5_13527	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_91 530753..531023 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13527	CDS_13527	Tribonema minus UTEX_B_3156	CDS	Contig_91 531024..531262 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_13527	UTR3_13527	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_91 536308..536727 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_91:530753..536727+
coding sequence from alignment at Contig_91:530753..536727+

spliced messenger RNA

>mRNA_13527 ID=mRNA_13527|Name=jgi.p|Trimin1|351482|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2110bp|location=Sequence derived from alignment at Contig_91:530753..536727+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCTGGCTGGGCAGGCATTCGAGCAGTAACGTGGTGAAGCACCACCAGCCT
TCATTTGCGGCTGCTCTGCCTTGGTCTGAACTCTTGTGACGAGGGTTAAG
CAATTTCACAGTTGGTGCTCACGAGAGACCAACTGCGGGACCTCGCACGG
CGCGGCGCCGTGAACGTGCAGTAAGCGGGCGCACCGGAGGTGACTTTCGC
AAGAGCAGCAGCAGCGAAGCCGGGGGGTGCACAGAGCGGGACATTACAGC
AAGTGGACCTCCGTCGTCATCATGGGAGGCGCGCCGGAGATGAGCGACTT
TCAGGCACACGTGCTCGTGGGTATGTCGGTGGTGGGGGCAGGCATTGTGC
TGGCAGGCATGTGCAAAGTCTGGGGCGTGCAGCAAGTGCTATTGGGGGCT
TTACCACTGATCGTGACCATCGGTGCCGCATACTGGCTCGCCTCGTGCTT
GGACGACAGGAACGATGCAGAGGACAAGGCAAACGAGGAACAGCTGCAGC
AGGCAGCCAGGCCCGGAGCACCCTCTGCAAACTACGCCACGGTGACCTAT
CAGACGTTGTCCGTGCGCGTGCGCCACCACTGCAGCTACACGCGCCGCAT
ACGCATCGTGCGGCGCGTCGTCTTCTTCGGGAAGGCGGAGTTTGGCAGCG
GCTCCTGCGGCCCCGTCCCCAGGAAGTGGCTCATTCGGCACCTCGCCTGC
CTGGTGCCGCCGGGGTATGGGCACGCGGGAGCCGCTGCCGAACTCCGCCT
TGGCCCAGAAGACAACGCGGTGCACACTGGGGTCAGGGAGGTCGTGCGTG
TGAACCGCAACTCCGCCACGCTCAAGTCCGGCCTCACCAGTGGTCCTGAA
GACATTGCAGCAGCGAGCGGGCTGGACCAGGACTGGCAGCACGTGGAGGT
CCCAACCGGGCTGATGAAGGTGCCGCAGCCTCAGGGACATGTTGTCGCCA
CTGCGAAAGCGGTGTACGCCACGGTGGCACACGGACTTTTCAGTCACGGC
AAGCAGTTTGAGCACCAGCAGCAGCTTGAGCGCGAGACGGCTGCAGCTGT
GGAACGGGCACTGGCGTGGGAGCGCCGTCAGCTGCAGAAGGCCGCGGCGA
TTATGGCAATGCTGGAGGGCGCACTGCTGCAGCATCAGCTGCACCAAATC
ACGACTGTCAACAAAGGTCTGGCGGAAATGTGGCGGCGGCAGCAGCAGCA
GCAGCAGCTGCAATGCGAGCGCGACAGGGCTGAAGGCCTTGCGGCGGAGC
TGGTGCAAGAGCGGGAGCGCCACCAGGAGGAGGTGCGGGAGCTGCAGGCG
CAGCACGACCTCGCCCAGACAGCGGCTGTCGCGGCAGCGCTGGCAGATGA
ACGTCAGCGACACCAGCTGCTGCTGAGAGACGCGGCCATGGCAGGTCTGT
CACCGATGGCTGCTCAGCTTCAGGTTGCACTGCAGCAGGCTCAGCAGCAG
CAGCAGCAGGAGCTCACAGCCGTTGCCGCCGCGGTGGAGGCGCAGCACCT
GACTATCACACAGGAGCTGGATGATCTGAGGCAGCAGCACCAATCCCTGC
ATGGCGAGTACACATGGTACCGCGTGCGGCGCCAAATGATGGACATGTCG
CTGAACAAGCAGTCGACGCCTGCTGCCAGTGCACCTCCCGAAGCCAAACC
CCGCAGCGTGCTGGTGACCGTGCCAAGCTTCGCGGACTAGCAGCAGCGTG
TCATGCAGCTGCTGGCCGGCATGGCTGCTCCACACCAGCAGGTGATCAGC
TGCGAGCGAGTGGACAACGGCGGCCCAGCTGACGCGCCGCTCGGGACTTG
GCGGGTGAAACTGGCAAGCGGCATGCTTTGCAGGCGCCTGCAGGCATACA
CCGGAACCGTCAAGGCGCACTGTGAGGAGCTGGGCTCACTGTGGGTGAGG
GGGGAAAGTGCTCCGCGGCCACGAGTACCAATGGTAGGTGATGACTGACT
GGCACATTCAATTCGCTGCGAGCCTGCAAACTTCCACGGTGGCCAGCCAT
CGCACTGCCAGTTGTTGTTGTAGGGTCGCGGTTGAGGCAGGTCCCGAAGT
TTGACGTGGTGTCACAGGTGGGCGCCCCCCCCCCAACCCTTCCCCCCCAC
CCCCCGGGGG

protein sequence of jgi.p|Trimin1|351482

>Trimin1|351482|estExt_Genemark1.C_Ctg_910044 ID=Trimin1|351482|estExt_Genemark1.C_Ctg_910044|Name=jgi.p|Trimin1|351482|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=473bp
MGGAPEMSDFQAHVLVGMSVVGAGIVLAGMCKVWGVQQVLLGALPLIVTI
GAAYWLASCLDDRNDAEDKANEEQLQQAARPGAPSANYATVTYQTLSVRV
RHHCSYTRRIRIVRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVPPGYG
HAGAAAELRLGPEDNAVHTGVREVVRVNRNSATLKSGLTSGPEDIAAASG
LDQDWQHVEVPTGLMKVPQPQGHVVATAKAVYATVAHGLFSHGKQFEHQQ
QLERETAAAVERALAWERRQLQKAAAIMAMLEGALLQHQLHQITTVNKGL
AEMWRRQQQQQQLQCERDRAEGLAAELVQERERHQEEVRELQAQHDLAQT
AAVAAALADERQRHQLLLRDAAMAGLSPMAAQLQVALQQAQQQQQQELTA
VAAAVEAQHLTITQELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTP
AASAPPEAKPRSVLVTVPSFAD*

mRNA from alignment at Contig_91:530753..536727+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13527 ID=mRNA_13527|Name=jgi.p|Trimin1|351482|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5975bp|location=Sequence derived from alignment at Contig_91:530753..536727+ (Tribonema minus UTEX_B_3156 )
GCTGGCTGGGCAGGCATTCGAGCAGTAACGTGGTGAAGCACCACCAGCCT
TCATTTGCGGCTGCTCTGCCTTGGTCTGAACTCTTGTGACGAGGGTTAAG
CAATTTCACAGTTGGTGCTCACGAGAGACCAACTGCGGGACCTCGCACGG
CGCGGCGCCGTGAACGTGCAGTAAGCGGGCGCACCGGAGGTGACTTTCGC
AAGAGCAGCAGCAGCGAAGCCGGGGGGTGCACAGAGCGGGACATTACAGC
AAGTGGACCTCCGTCGTCATCATGGGAGGCGCGCCGGAGATGAGCGACTT
TCAGGCACACGTGCTCGTGGGTATGTCGGTGGTGGGGGCAGGCATTGTGC
TGGCAGGCATGTGCAAAGTCTGGGGCGTGCAGCAAGTGCTATTGGGGGCT
TTACCACTGATCGTGACCATCGGTGCCGCATACTGGCTCGCCTCGTGCTT
GGACGACAGGAACGATGCAGAGGACAAGGCAAACGAGGAACAGCTGCAGC
AGGCAGCCAGGTCAGCACCCGAAACTTCAGCGCCTGGTAGTGCACAAGCA
TCGAGTGTTTCCCAAAGGCCGAGGCGCAGTAGTAGGCTGCGGGCAGACTA
AATGTACATGCAATGAGCATTTACTATCCCTTGGTCGGCGCAACACCTGT
TGCTCTCTTGCATTTTGTGAAATTCATGTCGTAGCGTGTATTTACTGTGT
ACCTGCCTCAATATGTGCAGTCAATGCGCAGCAGAAACAGTCACATGTCT
GCCGCAGTAGCTGGGGAAGTTCTTGATGAAGGACACATATGCTCTCTGTA
GAGAGTCAGTCTTGATTATGCACGTTGAGGCTGCACTAGCCCGTGCATCT
GCAACACATCATGTGTATCGACATCTTCTGCCAGCAACACTGCGACCTGT
ACATGCCGGCGCAGGATAGCTTCGCAGGTACGCCATGAAGGGATGCAATA
AGGGATGCAATGCCCACACTGGTTCATGAAATGGCCTCACAAAAGTTAGT
ACTGCATGGCTGCGTCTTCTGGCTATGGCAGCAATTGCCTTTTGCGCATT
TGCCTTAACACAGGCGGTGTCCTGGTTAAAGTCTGCTAGGAAACTTGTAG
ACAGCAGTCACCATGATTACGCGTATACATCAGCATTGCAGAGGTACTGT
GTCAATGTTCACATGTGCATGTGTGCTGTGAAGCTGCCTGATGCGTGCCA
CATCATGGGCGTGTATCACTCGAGATCGATATATGCCCATTAAGCCCCTC
GAGACGAGCAGGAACATCAGCCGCGACAAATCACGATGAATTGTTTGAAA
ATCGAGTTGCGCGGCGCCCGGGCGGTCATATATTCTGTTGCGTGTGGGAT
GCAGGGCGCAGTATACGTTTTATCACTTATTATGCATCTCAAGAACTGGG
AGTCAAGCAAGCTTGGGTGGCGCCATTTGCATCATATTGAGGGGAGTGCC
AAATTTGACTGCCAATGTGCTTCACTCAAGAGGTGCAGAGTGCCTTGACC
AGCACAACGTCGCCTTCGTTTTGCCCAAGCGCCTGCACCAATTTAAATGC
ATTGCAATGCAGCGAGGCAGCGCCATAGCCATCCCTGCACATCATGGTCG
ACCGACCTGCGTTGATGGGAGGGGTGTTTACATTATGTGATTACAAGTTT
CATTTACTTTTGCAGGCTTGTTGCCACTGTTGTTGAACGGAAGTACAACA
AGAGCGAGAACTAGTAAAAAGTACAACACATTGTTGAGCGACTCGGAATA
AGAGTGCCGGGGGGCTGTTAGCTGCCGTTGGTGAGAGGGGGGTGTAGTAC
ACACATGAGTGGGTTTTGAACGTCAGTCATTTGAATTGTCAGGCTTTTTG
ATTTATCGCCACTTTTATCAATCGGAATTTCGGCACGTTCTTGAGCAGAT
AAAACTGCAGGGTCTGTCAGCTGACGTCAGAGCACCTGCAATTCAGCCCT
AAGAATGCAGCTGGTCTGCCTTGCACATGCACCTGCACTTTGACACAGGC
GATGGACGCAGTCCTGCACATCTGACTGAATCTTGTTGTGGGCATCAGAT
GGCTGTAGCCCTAGGCATGCTGAACAACAACCACAACTGCAGTGTGTGTC
TATAACTATTATGATTACGTGCATACGTCGGTGAGGAGCATTAGGCCAGT
ATGCACAGTCAATGAACAGTGCTCTGTCCTGTGAGCACACAGACTCAAAA
GGTATCAATGAATTGGAGACACACACCTGAACAGCTGATGGTGTGGCTCA
GAGAATGGGCAAATACTCGTTGCACTTGATGCTGGATGATGCGGAGGTGG
AACCTGCTTAGGGGTAGCGGTCTTGCTCATAGACCTTGAGACTTGGGTGC
ATGGAGTGAGAGACCATGAGCTGACGCCAGTTGAGGGTATCCGCCTGACT
CAGACCAGAGTTTATTCATGAACATGATCCTCAGTCAAACCCTAACCTAT
AGGGCATGTGTCTGATGTGGTCAATCTGCTTTAACTCCCCCTTCTTCAGA
TCAGCGTCGCCCTCGATGCTGGGCATCATTGAGTGATATTTGCTTGATTT
TCTTAACCTTTCTTAGCACGTCATCGCCGGTTAAACCAATTCAGGGCAGG
GGTGGTGCTGTATCCATTAGTCATCAGTTTGGAAACCGGAAAATAAAAGC
CTTCACGAGATGTTACTTATTCATGATAATTTCAGATGTGCCGCAAGCGG
GACCCGCCGCGTGGCGGAGGATCGGTTCACATCTCAGACCTCCCTGCGCA
GGCCCGGAGCACCCTCTGCAAACTACGCCACGGTGACCTATCAGACGTTG
TCCGTGCGCGTGCGCCACCACTGCAGCTACACGCGCCGCATACGCATGTT
CGACTCATACCGCGCCAGGGAGCGGGCGGTAGCGCCTTGTGGCCCGCGAC
ATCATCGGCCCACCTGACCCCAGCGTGCGGCGCGTCGTCTTCTTCGGGAA
GGCGGAGTTTGGCAGCGGCTCCTGCGGCCCCGTCCCCAGGAAGTGGCTCA
TTCGGCACCTCGCCTGCCTGGTGCCGCCGGGGTATGGGCACGCGGGAGCC
GCTGCCGAACTCCGCCTTGGCCCAGAAGACAACGCGGTGCACACTGGGGT
CAGGTGGGGCCGATGATATCGCGGGCCATGCGCACCACCGCCCGCTCCCT
TGCGTGGTAGGAGTCGAACGGGCGTATGCGGCGTGTATGGCTGAAGTAGT
GCCGTACGCGCACAGACAACATCTGGTACGTCACCGTGGCGTAGTTGGCG
GCACCTTCTCCGGGCCTGCGCAGGGAGGTCGTGCGTGTGAACCGCAACTC
CGCCACGCTCAAGTCCGGGTCCCGCTTGCGGCACATCTTGAGGCAGTGGC
GTGAGTTCTTGCTCAGTGCCTCGTAGCTGGACGGTGAGAGGGAAGCGGCG
AGAGAGAAGCAGGAGCGGGAGGAAAAAAGCGGAAGGAAAAAGGGGCAAGG
GGGAGCAGGCAGGGATGTGAGCGCTGATTCTTGATTACTAAACTCAATTC
ATCACACGAGCTGTACAATGTCTTGTGCCTTGGGGTTGAAATTTAGTGTA
CCGCCCTGCAACTGACAGCGAAAGTTCGCCACATATACAAGTCAGGTCAG
CACCGCGCTTATCTCGAGGAGCGGCGGCAAAGGAGGTCTGCACGGCTACC
GCAGGATAGCCTCGAAACAAGCACATAGGTTCCAAGAGCGGCGTATTTTT
TTTCAAAAGCCCTTATCTTTGCCATTTTGACCTCAATCCGCCTAGGGGCA
CCAGCAGCTGCGGTTCGTCACTGCGATCCCTCACCAGGTCATTTGTGACA
AGCCGTATCCGCGTCAAGTCCAACTTCACCTTGTAAAGAACGACTAGCCT
TATAGCGTCACGGGTGCCATGAAGTCGACGCCGGGTGTTCTTTCGTGCTC
ATACGACAACTCCAGCAGCGGGCCTCAAGGCACCAAAGCAGCCGGAGCAG
CAGGATCTTGTGCCTTCAGAATGCTACAAGGAGATCCAAACAAAACGTTC
GGCCTCGAAAGAGTCCAAGAGTAAAGCTGCTCAAACACAAGACTTACCTT
GTCATGTACTCGTTGATCGCCGTGCAGCGTCAGCTGTCAGGTCAGATCTC
TCCCCAGCTTCAACTTGCACTTAAAGTCTCGACATTTTGCACTGTGTAGA
GAGAGCAGCCGCCATGACGACGGGTGAGAATTCGCGGACAAACGGCAGCC
TCACCAGTGGTCCTGAAGACATTGCAGCAGCGAGCGGGCTGGACCAGGAC
TGGCAGCACGTGGAGGTCCCAACCGGGTAAGATCAACAAACCCATGAGCA
GCAAGAGGAGCAAGACCAGGAAGATGAGTAAGAGGGTCAAGAGCAGCAAA
AGAGGAGCAAGAGCAGCAAAAGAGCAGCAACAGCAACAGCAGCAAGAGCA
GCAACATGAGCAAGAGCCTTGAAGTTGAATTAATTGTAGTTGAGGTTTGT
ATCAACTGTGATTGCGATGAAGCCGCTTGATGCTGTGTGCTTGTGTCATT
CGCATGAGTTTTAGTTGAAGTGTAAGCCAACGTGACTGAAGCCGCTTCAG
TCTCGCAGTGAACTGTCACCTGTTCTGCATGTTTAGTCCGCAAGACTTAT
TCTCGAACCACCTGCTGTCAATGACATCATGCTGATGCTGTGTGCTTGTG
CCATTTGCTGCTGCAGGCTGATGAAGGTGCCGCAGCCTCAGGTGCCCCCC
GCACAGATGTGCTCATCTGAGGCGACGCCATAGGAACGCCAGCGCAGTTC
AGGCGCCAGTGACGCCGCCACAACGCCGTCTCTGGCCGGCGCGCTGCAGG
GACATGTTGTCGCCACTGCGAAAGCGGTGTACGCCACGGTGGCACACGGA
CTTTTCAGTCACGGCAAGCAGTTTGAGCACCAGCAGCAGCTTGAGCGCGA
GACGGCTGCAGCTGTGGAACGGGCACTGGCGTGGGAGCGCCGTCAGCTGC
AGAAGGCCGCGGCGATTATGGCAATGCTGGAGGGCGCACTGCTGCAGCAT
CAGCTGCACCAAATCACGACTGTCAACAAAGGTCTGGCGGAAATGTGGCG
GCGGCAGCAGCAGCAGCAGCAGCTGCAATGCGAGCGCGACAGGGCTGAAG
GCCTTGCGGCGGAGCTGGTGCAAGAGCGGGAGCGCCACCAGGAGGAGGTG
CGGGAGCTGCAGGCGCAGCACGACCTCGCCCAGACAGCGGCTGTCGCGGC
AGCGCTGGCAGATGAACGTCAGCGACACCAGCTGCTGCTGAGAGACGCGG
CCATGGCAGGTCTGTCACCGATGGCTGCTCAGCTTCAGGTTGCACTGCAG
CAGGCTCAGCAGCAGCAGCAGCAGGAGCTCACAGCCGTTGCCGCCGCGGT
GGAGGCGCAGCACCTGACTATCACACAGGAGCTGGATGATCTGAGGCAGC
AGCACCAATCCCTGCATGGCGAGTACACATGGTACCGCGTGCGGCGCCAA
ATGATGGACATGTCGCTGAACAAGCAGTCGACGCCTGCTGCCAGTGCACC
TCCCGAAGCCAAACCCCGCAGCGTGCTGGTGACCGTGCCAAGCTTCGCGG
ACTAGCAGCAGCGTGTCATGCAGCTGCTGGCCGGCATGGCTGCTCCACAC
CAGCAGGTGATCAGCTGCGAGCGAGTGGACAACGGCGGCCCAGCTGACGC
GCCGCTCGGGACTTGGCGGGTGAAACTGGCAAGCGGCATGCTTTGCAGGC
GCCTGCAGGCATACACCGGAACCGTCAAGGCGCACTGTGAGGAGCTGGGC
TCACTGTGGGTGAGGGGGGAAAGTGCTCCGCGGCCACGAGTACCAATGGT
AGGTGATGACTGACTGGCACATTCAATTCGCTGCGAGCCTGCAAACTTCC
ACGGTGGCCAGCCATCGCACTGCCAGTTGTTGTTGTAGGGTCGCGGTTGA
GGCAGGTCCCGAAGTTTGACGTGGTGTCACAGGTGGGCGCCCCCCCCCCA
ACCCTTCCCCCCCACCCCCCGGGGG

Coding sequence (CDS) from alignment at Contig_91:530753..536727+

>mRNA_13527 ID=mRNA_13527|Name=jgi.p|Trimin1|351482|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1419bp|location=Sequence derived from alignment at Contig_91:530753..536727+ (Tribonema minus UTEX_B_3156 )
ATGGGAGGCGCGCCGGAGATGAGCGACTTTCAGGCACACGTGCTCGTGGG
TATGTCGGTGGTGGGGGCAGGCATTGTGCTGGCAGGCATGTGCAAAGTCT
GGGGCGTGCAGCAAGTGCTATTGGGGGCTTTACCACTGATCGTGACCATC
GGTGCCGCATACTGGCTCGCCTCGTGCTTGGACGACAGGAACGATGCAGA
GGACAAGGCAAACGAGGAACAGCTGCAGCAGGCAGCCAGGCCCGGAGCAC
CCTCTGCAAACTACGCCACGGTGACCTATCAGACGTTGTCCGTGCGCGTG
CGCCACCACTGCAGCTACACGCGCCGCATACGCATCGTGCGGCGCGTCGT
CTTCTTCGGGAAGGCGGAGTTTGGCAGCGGCTCCTGCGGCCCCGTCCCCA
GGAAGTGGCTCATTCGGCACCTCGCCTGCCTGGTGCCGCCGGGGTATGGG
CACGCGGGAGCCGCTGCCGAACTCCGCCTTGGCCCAGAAGACAACGCGGT
GCACACTGGGGTCAGGGAGGTCGTGCGTGTGAACCGCAACTCCGCCACGC
TCAAGTCCGGCCTCACCAGTGGTCCTGAAGACATTGCAGCAGCGAGCGGG
CTGGACCAGGACTGGCAGCACGTGGAGGTCCCAACCGGGCTGATGAAGGT
GCCGCAGCCTCAGGGACATGTTGTCGCCACTGCGAAAGCGGTGTACGCCA
CGGTGGCACACGGACTTTTCAGTCACGGCAAGCAGTTTGAGCACCAGCAG
CAGCTTGAGCGCGAGACGGCTGCAGCTGTGGAACGGGCACTGGCGTGGGA
GCGCCGTCAGCTGCAGAAGGCCGCGGCGATTATGGCAATGCTGGAGGGCG
CACTGCTGCAGCATCAGCTGCACCAAATCACGACTGTCAACAAAGGTCTG
GCGGAAATGTGGCGGCGGCAGCAGCAGCAGCAGCAGCTGCAATGCGAGCG
CGACAGGGCTGAAGGCCTTGCGGCGGAGCTGGTGCAAGAGCGGGAGCGCC
ACCAGGAGGAGGTGCGGGAGCTGCAGGCGCAGCACGACCTCGCCCAGACA
GCGGCTGTCGCGGCAGCGCTGGCAGATGAACGTCAGCGACACCAGCTGCT
GCTGAGAGACGCGGCCATGGCAGGTCTGTCACCGATGGCTGCTCAGCTTC
AGGTTGCACTGCAGCAGGCTCAGCAGCAGCAGCAGCAGGAGCTCACAGCC
GTTGCCGCCGCGGTGGAGGCGCAGCACCTGACTATCACACAGGAGCTGGA
TGATCTGAGGCAGCAGCACCAATCCCTGCATGGCGAGTACACATGGTACC
GCGTGCGGCGCCAAATGATGGACATGTCGCTGAACAAGCAGTCGACGCCT
GCTGCCAGTGCACCTCCCGAAGCCAAACCCCGCAGCGTGCTGGTGACCGT
GCCAAGCTTCGCGGACTAG