Trimin1|351482|estExt_Genemark1.C_Ctg_910044 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351482
Unique NameTrimin1|351482|estExt_Genemark1.C_Ctg_910044
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length473
Homology
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835YHH0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH0_9STRA)

HSP 1 Score: 862 bits (2227), Expect = 1.130e-314
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 0
Query:    1 MGGAPEMSDFQAHVLVGMSVVGAGIVLAGMCKVWGVQQVLLGALPLIVTIGAAYWLASCLDDRNDAEDKANEEQLQQAARPGAPSANYATVTYQTLSVRVRHHCSYTRRIRIVRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVPPGYGHAGAAAELRLGPEDNAVHTGVREVVRVNRNSATLKSGLTSGPEDIAAASGLDQDWQHVEVPTGLMKVPQPQGHVVATAKAVYATVAHGLFSHGKQFEHQQQLERETAAAVERALAWERRQLQKAAAIMAMLEGALLQHQLHQITTVNKGLAEMWRRQQQQQQLQCERDRAEGLAAELVQERERHQEEVRELQAQHDLAQTAAXXXXXXXXXXXXXLLLRDAAMAGLSPMAAQLQVALQQAQXXXXXELTAVAAAVEAQHLTITQELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTPAASAPPEAKPRSVLVTVPSFAD 472
            MGGAPEMSDFQAHVLVGMSVVGAGIVLAGMCKVWGVQQVLLGALPLIVTIGAAYWLASCLDDRNDAEDKANEEQLQQAARPGAPSANYATVTYQTLSVRVRHHCSYTRRIRIVRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVPPGYGHAGAAAELRLGPEDNAVHTGVREVVRVNRNSATLKSGLTSGPEDIAAASGLDQDWQHVEVPTGLMKVPQPQGHVVATAKAVYATVAHGLFSHGKQFEHQQQLERETAAAVERALAWERRQLQKAAAIMAMLEGALLQHQLHQITTVNKGLAEMWRRQQQQQQLQCERDRAEGLAAELVQERERHQEEVRELQAQHDLAQTAAXXXXXXXXXXXXXLLLRDAAMAGLSPMAAQLQVALQQAQXXXXXELTAVAAAVEAQHLTITQELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTPAASAPPEAKPRSVLVTVPSFAD
Sbjct:    1 MGGAPEMSDFQAHVLVGMSVVGAGIVLAGMCKVWGVQQVLLGALPLIVTIGAAYWLASCLDDRNDAEDKANEEQLQQAARPGAPSANYATVTYQTLSVRVRHHCSYTRRIRIVRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVPPGYGHAGAAAELRLGPEDNAVHTGVREVVRVNRNSATLKSGLTSGPEDIAAASGLDQDWQHVEVPTGLMKVPQPQGHVVATAKAVYATVAHGLFSHGKQFEHQQQLERETAAAVERALAWERRQLQKAAAIMAMLEGALLQHQLHQITTVNKGLAEMWRRQQQQQQLQCERDRAEGLAAELVQERERHQEEVRELQAQHDLAQTAAXXXXXXXXXXXXXLLLRDAAMAGLSPMAAQLQVALQQAQXXXXXELTAVAAAVEAQHLTITQELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTPAASAPPEAKPRSVLVTVPSFAD 472          
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835YQT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.340e-19
Identity = 55/92 (59.78%), Postives = 60/92 (65.22%), Query Frame = 0
Query:   80 RPGAPSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVP 146
            RPGAP+ANYATVTYQTLSVR RH+ S+TRRIR                          VR+VVFFGKAEFGSGS GP+PRK LIRHLA L P
Sbjct:  198 RPGAPAANYATVTYQTLSVRARHYLSHTRRIRTFDAYRARERAVAWVARDILGPPDPSVRKVVFFGKAEFGSGSRGPIPRKRLIRHLASLAP 289          
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835Z8K6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8K6_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.480e-19
Identity = 68/151 (45.03%), Postives = 78/151 (51.66%), Query Frame = 0
Query:   80 RPGAPSANYATVTYQTLSVRVRH-HCS-------YTRRIRIV---------------RRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVPPGYGHAGAAAELRLG---PEDNAVHTGVREVVRVNRNSATLKSGLTSGPEDIAAASGLDQD 204
            +PGAP+ANYATVTYQTLSVR RH H S       Y  R R V               R+VVFFGKAEFGSGS GP+PRK LIRHLACL P   G      E R     P+D A    +R     +R    + SGL    E       +D+D
Sbjct:   24 KPGAPAANYATVTYQTLSVRARHYHTSRILTFDAYRARERAVARVARDILGPPDPSVRKVVFFGKAEFGSGSRGPMPRKRLIRHLACLAPVVLGD-----EFRTSITCPQDRAP---LRRSALGSRVFCCVNSGLDVPEESRCNVKAIDRD 166          
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836CHE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHE2_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.150e-15
Identity = 54/112 (48.21%), Postives = 63/112 (56.25%), Query Frame = 0
Query:   63 RNDAEDKANEEQLQQAA---RPG-APSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLV 145
            R D + +A E Q  +     RPG A +ANYA VTY TLSVR RH+ ++ RR+R                          V RVVFFGKAEFGSGS GP+PRK LIRHLACL 
Sbjct:   25 RRDPQFQAAEAQFTEQTSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLA 136          
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835Z5K2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K2_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.890e-14
Identity = 54/113 (47.79%), Postives = 64/113 (56.64%), Query Frame = 0
Query:   62 DRNDAEDKANEEQLQQAA---RPG-APSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLV 145
            +R D + +A E Q  +     RPG A +ANYA VTY TLSVR RH+ ++ RR+R                          V RVVFFGKAEFGSGS GP+PRK LIRHLACL 
Sbjct:  534 NRRDPQFQAAEAQFTEQTSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLA 646          
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836CCS7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS7_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.210e-14
Identity = 47/91 (51.65%), Postives = 54/91 (59.34%), Query Frame = 0
Query:   80 RPGAPSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLV 145
            RPGA S++Y  VTYQTL +R RHHCS  RR+R                          VRRVVFFGKAEFGSGS GP+P K LIR ++CLV
Sbjct:   16 RPGA-SSDYDVVTYQTLVLRARHHCSCERRMRTTTAYHARERAVARAARDIIGPRDPTVRRVVFFGKAEFGSGSRGPIPCKRLIRQISCLV 105          
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836C8P7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P7_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.430e-14
Identity = 54/112 (48.21%), Postives = 63/112 (56.25%), Query Frame = 0
Query:   63 RNDAEDKANEEQLQQAA---RPG-APSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLV 145
            R D + +A E Q  +     RPG A +ANYA VTY TLSVR RH+ ++ RR+R                          V RVVFFGKAEFGSGS GP+PRK LIRHLACL 
Sbjct:  488 RRDPQFQAAEAQFAEETSLRRPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRARERAVARVARDIIGPRDTGVHRVVFFGKAEFGSGSRGPIPRKRLIRHLACLA 599          
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A836CBP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 4.400e-13
Identity = 42/58 (72.41%), Postives = 46/58 (79.31%), Query Frame = 0
Query:  415 ELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTPAASAPPEAKPRSVLVTVPSFAD 472
            +LDDLRQQHQSL  E+TW RVRRQ+ DMSL K+   AAS PPEAKPR VLVTVP F D
Sbjct:    6 KLDDLRQQHQSLDDEFTWERVRRQVTDMSLTKEPESAASVPPEAKPRCVLVTVPRFVD 63          
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835YPN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 6.270e-13
Identity = 44/93 (47.31%), Postives = 51/93 (54.84%), Query Frame = 0
Query:   80 RPG-APSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVP 146
            RPG A +AN+A VT   L +R RHHC++ RR+R                          VR V FFGKAEFGSGS  P+PRK  IRHLACL P
Sbjct:   72 RPGPATTANFAAVTDSMLFMRTRHHCTWERRMRSFNTYRGRERAVARVARDIIGPRKPQVRHVTFFGKAEFGSGSRNPIPRKRFIRHLACLEP 164          
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Match: A0A835Z192_9STRA (FAD-binding PCMH-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z192_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.890e-13
Identity = 47/92 (51.09%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   80 RPG-APSANYATVTYQTLSVRVRHHCSYTRRIRI-------------------------VRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLV 145
            RPG A +ANYA VTY TLSVR RH+ ++ RR+R                          V RVVFFGKA+ GSGS GP+PRK LIRHLACL 
Sbjct:  253 RPGVAVAANYAAVTYDTLSVRTRHYFTWERRMRSFNSYRACERAVARVARDIIGPRDTGVHRVVFFGKAKCGSGSLGPIPRKRLIRHLACLA 344          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351482 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A835YHH0_9STRA1.130e-314100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQT5_9STRA2.340e-1959.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8K6_9STRA4.480e-1945.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHE2_9STRA1.150e-1548.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5K2_9STRA1.890e-1447.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCS7_9STRA2.210e-1451.65Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836C8P7_9STRA2.430e-1448.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBP3_9STRA4.400e-1372.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YPN9_9STRA6.270e-1347.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z192_9STRA7.890e-1351.09FAD-binding PCMH-type domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availableCOILSCoilCoilcoord: 306..351
NoneNo IPR availableCOILSCoilCoilcoord: 402..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_91contigContig_91:531024..536307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351482mRNA_13527Tribonema minus UTEX_B_3156 mRNAContig_91 530753..536727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351482|estExt_Genemark1.C_Ctg_910044 ID=Trimin1|351482|estExt_Genemark1.C_Ctg_910044|Name=jgi.p|Trimin1|351482|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=473bp
MGGAPEMSDFQAHVLVGMSVVGAGIVLAGMCKVWGVQQVLLGALPLIVTI
GAAYWLASCLDDRNDAEDKANEEQLQQAARPGAPSANYATVTYQTLSVRV
RHHCSYTRRIRIVRRVVFFGKAEFGSGSCGPVPRKWLIRHLACLVPPGYG
HAGAAAELRLGPEDNAVHTGVREVVRVNRNSATLKSGLTSGPEDIAAASG
LDQDWQHVEVPTGLMKVPQPQGHVVATAKAVYATVAHGLFSHGKQFEHQQ
QLERETAAAVERALAWERRQLQKAAAIMAMLEGALLQHQLHQITTVNKGL
AEMWRRQQQQQQLQCERDRAEGLAAELVQERERHQEEVRELQAQHDLAQT
AAVAAALADERQRHQLLLRDAAMAGLSPMAAQLQVALQQAQQQQQQELTA
VAAAVEAQHLTITQELDDLRQQHQSLHGEYTWYRVRRQMMDMSLNKQSTP
AASAPPEAKPRSVLVTVPSFAD*
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