mRNA_13251 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352402
Unique NamemRNA_13251
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: A0A835ZB95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB95_9STRA)

HSP 1 Score: 265 bits (678), Expect = 4.680e-89
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 3
Query:  126 MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDTKDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVGAACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP 533
            MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDTKDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVGAACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP
Sbjct:    1 MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDTKDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVGAACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP 136          
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: A0A835ZHA0_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHA0_9STRA)

HSP 1 Score: 622 bits (1605), Expect = 5.070e-225
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1
Query:    1 MLVPAFFDNCMGSMILGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRWGSGGGL 960
            MLVPAFFDNCMGSMILGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRWGSGGGL
Sbjct:    1 MLVPAFFDNCMGSMILGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRWGSGGGL 320          
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: A0A836C7N9_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N9_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.360e-86
Identity = 148/311 (47.59%), Postives = 195/311 (62.70%), Query Frame = 1
Query:    1 MLVPAFFDNCMGSMILGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVID 933
            +LVP+FFDN  GSMILG LVAA++T+ K GGALVLLTG++ G CGAYTTFSAW LQT+ L++A   +V    PQPQ+  + YI   +A FIV HR+G D+G +LTG V++ AP + +                                               +AI N  LL A    L++ALG++D SW+ +R+WLS LFA+PGA LR+ALAR  N FRGG FPLGTF AN+ GT+  AL+ H ++   +DW DTA RAF  GFCASLTTMSTLVNELA +R D   + G++Y+ S+VILA+ + G++ 
Sbjct:  133 LLVPSFFDNVAGSMILGFLVAASTTMSKGGGALVLLTGMSVGLCGAYTTFSAWTLQTNALLIAPTSDV----PQPQIAALCYIFASIATFIVAHRVGADVGALLTGAVQKAAPGISEGI---------------------------------------------IAIVNGVLLVATAIGLSIALGVNDNSWLEKRYWLSGLFAIPGASLRYALARQFNKFRGGRFPLGTFLANIGGTLACALVTHEFTK-ASDWDDTAARAFVTGFCASLTTMSTLVNELAILRRDHSVQDGVIYLASTVILAQFIVGMVS 393          
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: D7G2L8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L8_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.400e-23
Identity = 95/299 (31.77%), Postives = 141/299 (47.16%), Query Frame = 1
Query:   61 AATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNA-FRGGLFPLGTFAANMLGTICSALIAHAYSDYGTD--------WRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVI 930
            A  S+  +E     +  GLT GFCG+YTT+S W L+     +        G P   +  I+ +   LA F      G D+              +KQ+ A+   R  +++     + GG A      AGG++ ++                +L A    LA+ LG+D+ +W RR  WL+ +FA  GAL RF L+R LN+  RGG FPLGTF AN+LG++  AL     S YGT         W + A +AF  GF  SLTTMST ++E+   R         +Y+ ++ I A+ L  ++
Sbjct:  116 ALASSPDRETIPDAMYAGLTVGFCGSYTTYSGWNLRIARAALGQ----VSGAPSGAIVTIVSMATSLAFFAACFSAGCDV--------------MKQI-ASHGRRLNIRR-----MLGGGAL-----AGGDSDAVR-----------NTLGMLGAVYVLLAVLLGVDN-NWSRRIDWLACIFAPFGALSRFFLSRQLNSRLRGGAFPLGTFTANVLGSLVMAL-----SFYGTKNSSSLTSGWSNVAIKAFQTGFLGSLTTMSTFMSEVVGHRDRHTPSASYIYLAATAIAAQALVLIV 368          
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: R1B6T8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1B6T8_EMIHU)

HSP 1 Score: 85.9 bits (211), Expect = 5.040e-15
Identity = 102/297 (34.34%), Postives = 134/297 (45.12%), Query Frame = 1
Query:   25 NCMGSMILGLL---VAATSTIPKEG-------GAL------------VLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDD-ASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRDTA--CRAFAVGFCASLTTMSTLVNEL 840
            N +G+ +LGLL    AA   +P E        GA              +L GL TGFCG  TTFS+W      LV A  D V                      I++   G  LG  +  L+   A H+ Q +A  A      +G ++  HG   ++ A  AGG + S AA  R   ALA+  A      V  L+L  G+D  A  + RR++L  LFA  G LLR  LA  LNA R   FPLGTF+ N+L     AL+  A  D   D    A   RA  +GFC SL+T+ST  +E+
Sbjct:  121 NIIGTFLLGLLCPGAAAARLLPAEADDRRRHIGAAGLAGRPAARVNAAILLGLRTGFCGCLTTFSSWNQAMVQLVAAEKDGV----------------------IIMGLKGALLGYAIGLLLPIVALHLGQAAALYAGLRLTPRGRSS--HGADPSQAA--AGGCSASTAAWWRCGAALALLLAVAAELGVG-LSLIPGMDGWADELTRRFFLGLLFAPAGVLLRRGLALKLNA-RCPPFPLGTFSGNVLSCAVMALLYEAIDDDDDDAPHFALVARAVGLGFCGSLSTVSTFADEV 389          
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: A0A0C4E6D1_MAGP6 (Uncharacterized protein n=1 Tax=Magnaporthiopsis poae (strain ATCC 64411 / 73-15) TaxID=644358 RepID=A0A0C4E6D1_MAGP6)

HSP 1 Score: 74.3 bits (181), Expect = 3.220e-11
Identity = 94/313 (30.03%), Postives = 137/313 (43.77%), Query Frame = 1
Query:   46 LGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVAN---PDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSAL---IAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGR--WGSGGGL 960
            +G +   T+  P +     L  GLTTGFCG++T+FS++ ++   L + N   P  ++  +      G  ++       +++  + + L G+ +G                AH A+      AA                AR  +   R    LA ++  L+ A VAA   A GL   +W+R +  L+  FA  G L RF L+  LN      FPLGTF AN+ GT   A+   +AHA    G        +    GFC  LTT+ST V ELA + A    R   VY  SS+ +A +LA  I G   W  GG L
Sbjct:  113 IGAMTTTTTPAPGKTKKTPLYVGLTTGFCGSFTSFSSF-IRDAFLALVNGLAPPGLSNSNNNGANGGQSFMA---FLAVILIAVSLSLAGLFSG----------------AHLAQAALKPTAAF---------------ARVRSVLDRTVMVLAWSSW-LVVAVVAATTTAPGLVSDAWLRGQVLLALAFAPLGCLARFYLSTALNGRLSPSFPLGTFVANVAGTAMLAVAWDLAHAR--LGGVVGCLVLQGVEDGFCGCLTTVSTWVAELAEL-ARRRTRDAYVYGASSIAVALLLAIAIMGGLVWSHGGDL 386          
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: A0A3N2Q5Y4_9PEZI (CrcB-like protein n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2Q5Y4_9PEZI)

HSP 1 Score: 72.0 bits (175), Expect = 1.850e-10
Identity = 48/123 (39.02%), Postives = 67/123 (54.47%), Query Frame = 1
Query:  601 LFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAY----SDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRWGSGGG 957
            +FA  G LLRF L+ WLN  R   FP+GTF AN+LGT+   L+   Y    +  G        R   VGFC SLTT+S+ + E+AA+       +G+V + ++  L  V+ G +  RWG G G
Sbjct:  263 VFAPVGCLLRFELSAWLN-MRVPSFPVGTFVANILGTV---LLGMGYDLMVAPVGGVLECQVLRGIEVGFCDSLTTLSSWIAEMAALGKRHAVTYGVVSVSTAFSLLTVIMGAM--RWGHGFG 379          
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: A0A2C5ZU45_9HYPO (Uncharacterized protein n=1 Tax=Cordyceps sp. RAO-2017 TaxID=2004951 RepID=A0A2C5ZU45_9HYPO)

HSP 1 Score: 68.2 bits (165), Expect = 2.690e-10
Identity = 57/137 (41.61%), Postives = 70/137 (51.09%), Query Frame = 1
Query:  571 WMRRRWW-----LSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSAL---IAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDG--RWGSG 951
            W  R +W     L+ +FA PG LLRF LA  LN  R   FPLGTFAAN+ G    A+   IAH     G        +    GFC  LTT+ST V ELAA+R      H  +Y  +SV+++  L  VI G  RW  G
Sbjct:   19 WPPRDFWRGRATLALVFAPPGCLLRFYLAALLNGRRPA-FPLGTFAANVFGCAVLAMAWDIAHV--PVGGYVGCQVLQGIEDGFCGCLTTISTWVAELAALRR----LHAYLYGAASVLVSFALMVVIMGGLRWTDG 148          
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: A0A066XSF4_COLSU (Putative CrcB-like protein n=1 Tax=Colletotrichum sublineola TaxID=1173701 RepID=A0A066XSF4_COLSU)

HSP 1 Score: 70.9 bits (172), Expect = 5.890e-10
Identity = 83/289 (28.72%), Postives = 116/289 (40.14%), Query Frame = 1
Query:  112 GLTTGFCGAYTTFSAWALQTDDLVVAN--PDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSAL---IAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDG--RWGSGGG 957
            GL TGFCG++T+FS++ ++   L   N  PD      P P+  G  ++    A  +V+  + + L  +  G     A   +  S AA    R      A + G  A     W G    ++      WR  A+                               S +FA  G L RF ++RWLN  R   FPLGTF  N+ G     +   + HA    G        +    GFC  LTT+ST V EL A+R     RH  VY+ SSV+    +  V+ G  RW  G G
Sbjct:  236 GLATGFCGSFTSFSSF-IRDVFLAATNDLPDAGGSAPPAPRNGGYSFMA---ALAVVLTTVSLSLSALTVGAHLAAALEPENPSNAAYPLGRKILDRGAVLLGWGA-----WVGAVILAVFPPRDAWRGQAV------------------------------FSLVFAPAGCLARFYVSRWLNP-RVPSFPLGTFVVNVAGVAVLGMCWDLGHA--GIGGVVGCQVLQGVEDGFCGCLTTVSTWVAELTALRR----RHAYVYLASSVVAGFAVLVVVMGPMRWTHGFG 478          
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: A0A0C7MMW8_9SACH (LALA0S02e09340g1_1 n=1 Tax=Lachancea lanzarotensis TaxID=1245769 RepID=A0A0C7MMW8_9SACH)

HSP 1 Score: 70.1 bits (170), Expect = 7.000e-10
Identity = 51/130 (39.23%), Postives = 70/130 (53.85%), Query Frame = 1
Query:  580 RRWWLSALFAVPGALLRFALARWLN-AFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRD--------TACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRW 942
            R W LSA+FA PGA+LR+ L++ LN  FR   FP+GTFAAN++GT+  A+I        +D           T   A   GFC SLTT+ST VNE   +      R  ++Y   S+ ++  L  VI G +
Sbjct:  219 RFWTLSAVFAFPGAVLRYVLSKQLNHRFRH--FPMGTFAANVIGTLILAIITLVTKGKRSDGSGIIHSNTAKTVVVALGNGFCGSLTTVSTFVNECQILPF----RRTMIYYFVSIFVSFGLVVVIVGSY 342          
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: A0A1G4JM95_9SACH (LAFA_0F04654g1_1 n=1 Tax=Lachancea sp. CBS 6924 TaxID=433476 RepID=A0A1G4JM95_9SACH)

HSP 1 Score: 69.7 bits (169), Expect = 9.440e-10
Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 1
Query:  580 RRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTD--------WRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRW 942
            R W LSA+FA PGA+LR+ L++ LN  R   FP+GTFAAN+LGT+  A+I        +D          +T   A   GFC  LTT+ST +NE   +      R  ++Y   S+ ++  L  VI G +
Sbjct:  219 RSWTLSAIFAFPGAVLRYFLSKQLN-HRIKHFPMGTFAANVLGTLVLAVITLVTKGKRSDDSAIIHSKTAETVVIALGNGFCGGLTTVSTFINECQILPF----RRTMIYYFVSIFVSFSLVVVILGSY 342          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZB95_9STRA4.680e-89100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|352402 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZHA0_9STRA5.070e-225100.00CrcB-like protein-domain-containing protein n=1 Ta... [more]
A0A836C7N9_9STRA1.360e-8647.59CrcB-like protein-domain-containing protein n=1 Ta... [more]
D7G2L8_ECTSI1.400e-2331.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
R1B6T8_EMIHU5.040e-1534.34Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A0C4E6D1_MAGP63.220e-1130.03Uncharacterized protein n=1 Tax=Magnaporthiopsis p... [more]
A0A3N2Q5Y4_9PEZI1.850e-1039.02CrcB-like protein n=1 Tax=Sodiomyces alkalinus F11... [more]
A0A2C5ZU45_9HYPO2.690e-1041.61Uncharacterized protein n=1 Tax=Cordyceps sp. RAO-... [more]
A0A066XSF4_COLSU5.890e-1028.72Putative CrcB-like protein n=1 Tax=Colletotrichum ... [more]
A0A0C7MMW8_9SACH7.000e-1039.23LALA0S02e09340g1_1 n=1 Tax=Lachancea lanzarotensis... [more]
A0A1G4JM95_9SACH9.440e-1037.98LAFA_0F04654g1_1 n=1 Tax=Lachancea sp. CBS 6924 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_118contigContig_118:249321..249863 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352402|estExt_Genemark1.C_Ctg_1180026
Hectar predicted targeting categorysignal peptide
TranscriptId352724
TrackFilteredModels1
ProteinId352402
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352402gene_13251Tribonema minus UTEX_B_3156 geneContig_118 249321..249863 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13251_1exon_13251_1Tribonema minus UTEX_B_3156 exonContig_118 249321..249863 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_13251UTR3_13251Tribonema minus UTEX_B_3156 three_prime_UTRContig_118 249321..249327 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13251CDS_13251Tribonema minus UTEX_B_3156 CDSContig_118 249328..249738 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_13251UTR5_13251Tribonema minus UTEX_B_3156 five_prime_UTRContig_118 249739..249863 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352402Trimin1|352402|estExt_Genemark1.C_Ctg_1180026Tribonema minus UTEX_B_3156 polypeptideContig_118 249328..249738 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13251 ID=mRNA_13251|Name=jgi.p|Trimin1|352402|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=543bp|location=Sequence derived from alignment at Contig_118:249321..249863- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CCGCTGTGGTCAGCTGGGCTGTGCTAAGCCTGCTGGCCTCGGCTGCAGCA
GCTGAGCCACAGCCACATTACCCTGGAGGTTCACAGCAAGCTCTACATCA
GAAAAGACGTTGCAGCCGGAGGAGGATGCGGAACTTGACTGCGGTCAGTG
TGTCAGCGCTGGCGCTGCTGACAGCGGTGCCCGTCGCCTCTGGCATGGGG
GCCAACGACCCCATTGCAGACAACAACTTGGGCAAGATCGCGCGTACCTG
CGCCGCGGCCCTCTGCCCGGACACCAAGGACTCGCTGCAGCTGTGGATGG
AGCTTCAGCCGGTCTGCATGGGCAGAACGAAGGGCATACTATCCAACTTC
CAGGTGCTGCCAGGCGAGAGCGCGGACGGGACCAACGGCGCCAGCATATC
GCTGTGGAGCCCCTTTGTCGTGGGGGCCGCCTGCGCTCTGGCGGCGGTGG
TGGGGGTGGTATTCGGGCTCAGGAGCGGCGCACAGATGGGCATGAAGTAC
TCCAGGATTGAGGTGCCGCGGACTTGTCAGCCGTAGACGCCGC
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protein sequence of jgi.p|Trimin1|352402

>Trimin1|352402|estExt_Genemark1.C_Ctg_1180026 ID=Trimin1|352402|estExt_Genemark1.C_Ctg_1180026|Name=jgi.p|Trimin1|352402|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=137bp
MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDT
KDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVG
AACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP*
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mRNA from alignment at Contig_118:249321..249863-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13251 ID=mRNA_13251|Name=jgi.p|Trimin1|352402|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=543bp|location=Sequence derived from alignment at Contig_118:249321..249863- (Tribonema minus UTEX_B_3156 )
CCGCTGTGGTCAGCTGGGCTGTGCTAAGCCTGCTGGCCTCGGCTGCAGCA GCTGAGCCACAGCCACATTACCCTGGAGGTTCACAGCAAGCTCTACATCA GAAAAGACGTTGCAGCCGGAGGAGGATGCGGAACTTGACTGCGGTCAGTG TGTCAGCGCTGGCGCTGCTGACAGCGGTGCCCGTCGCCTCTGGCATGGGG GCCAACGACCCCATTGCAGACAACAACTTGGGCAAGATCGCGCGTACCTG CGCCGCGGCCCTCTGCCCGGACACCAAGGACTCGCTGCAGCTGTGGATGG AGCTTCAGCCGGTCTGCATGGGCAGAACGAAGGGCATACTATCCAACTTC CAGGTGCTGCCAGGCGAGAGCGCGGACGGGACCAACGGCGCCAGCATATC GCTGTGGAGCCCCTTTGTCGTGGGGGCCGCCTGCGCTCTGGCGGCGGTGG TGGGGGTGGTATTCGGGCTCAGGAGCGGCGCACAGATGGGCATGAAGTAC TCCAGGATTGAGGTGCCGCGGACTTGTCAGCCGTAGACGCCGC
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Coding sequence (CDS) from alignment at Contig_118:249321..249863-

>mRNA_13251 ID=mRNA_13251|Name=jgi.p|Trimin1|352402|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=411bp|location=Sequence derived from alignment at Contig_118:249321..249863- (Tribonema minus UTEX_B_3156 )
ATGCGGAACTTGACTGCGGTCAGTGTGTCAGCGCTGGCGCTGCTGACAGC
GGTGCCCGTCGCCTCTGGCATGGGGGCCAACGACCCCATTGCAGACAACA
ACTTGGGCAAGATCGCGCGTACCTGCGCCGCGGCCCTCTGCCCGGACACC
AAGGACTCGCTGCAGCTGTGGATGGAGCTTCAGCCGGTCTGCATGGGCAG
AACGAAGGGCATACTATCCAACTTCCAGGTGCTGCCAGGCGAGAGCGCGG
ACGGGACCAACGGCGCCAGCATATCGCTGTGGAGCCCCTTTGTCGTGGGG
GCCGCCTGCGCTCTGGCGGCGGTGGTGGGGGTGGTATTCGGGCTCAGGAG
CGGCGCACAGATGGGCATGAAGTACTCCAGGATTGAGGTGCCGCGGACTT
GTCAGCCGTAG
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