Trimin1|352402|estExt_Genemark1.C_Ctg_1180026 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352402
Unique NameTrimin1|352402|estExt_Genemark1.C_Ctg_1180026
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length137
Homology
[Close]
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Match: A0A835ZB95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB95_9STRA)

HSP 1 Score: 266 bits (679), Expect = 5.820e-90
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:    1 MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDTKDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVGAACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP 136
            MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDTKDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVGAACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP
Sbjct:    1 MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDTKDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVGAACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP 136
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352402 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZB95_9STRA5.820e-90100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_118contigContig_118:249328..249738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352402mRNA_13251Tribonema minus UTEX_B_3156 mRNAContig_118 249321..249863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352402|estExt_Genemark1.C_Ctg_1180026 ID=Trimin1|352402|estExt_Genemark1.C_Ctg_1180026|Name=jgi.p|Trimin1|352402|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=137bp
MRNLTAVSVSALALLTAVPVASGMGANDPIADNNLGKIARTCAAALCPDT
KDSLQLWMELQPVCMGRTKGILSNFQVLPGESADGTNGASISLWSPFVVG
AACALAAVVGVVFGLRSGAQMGMKYSRIEVPRTCQP*
back to top