mRNA_13241 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352394
Unique NamemRNA_13241
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352394 vs. uniprot
Match: A0A835ZFG0_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG0_9STRA)

HSP 1 Score: 623 bits (1607), Expect = 2.940e-225
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 1
Query:    1 MHCYRVDGPLLEILEWLRGATFAVLPGGKLVYSLDREAFQTLGLPAKAVRPASTSRRPGGDKPRRYFGSADLHSKSFRPGKPLHDRLVQCLAKGARAETMLVWDGGGAGAFPASLAATRVAMEPHARVFQRVCCPQLRRAALTPALPPRERCRLIADMFAWLGVVACGLEDLLARPPLEPYVSSFEVPAGLAYGGSGARVCRVRLRGLIPVQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADIAKTTGAWAAVTTWGFQDCPGVVDGRGEAVAHAGGDSILAVIAIGGGGXXXXXDVAGGGGVSLAVVDAQCLRPLP 966
            MHCYRVDGPLLEILEWLRGATFAVLPGGKLVYSLDREAFQTLGLPAKAVRPASTSRRPGGDKPRRYFGSADLHSKSFRPGKPLHDRLVQCLAKGARAETMLVWDGGGAGAFPASLAATRVAMEPHARVFQRVCCPQLRRAALTPALPPRERCRLIADMFAWLGVVACGLEDLLARPPLEPYVSSFEVPAGLAYGGSGARVCRVRLRGLIPVQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADIAKTTGAWAAVTTWGFQDCPGVVDGRGEAVAHAGGDSILAVIAIGGGGXXXXXDVAGGGGVSLAVVDAQCLRPLP
Sbjct:    1 MHCYRVDGPLLEILEWLRGATFAVLPGGKLVYSLDREAFQTLGLPAKAVRPASTSRRPGGDKPRRYFGSADLHSKSFRPGKPLHDRLVQCLAKGARAETMLVWDGGGAGAFPASLAATRVAMEPHARVFQRVCCPQLRRAALTPALPPRERCRLIADMFAWLGVVACGLEDLLARPPLEPYVSSFEVPAGLAYGGSGARVCRVRLRGLIPVQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADIAKTTGAWAAVTTWGFQDCPGVVDGRGEAVAHAGGDSILAVIAIGGGGXXXXXDVAGGGGVSLAVVDAQCLRPLP 322          
BLAST of jgi.p|Trimin1|352394 vs. uniprot
Match: A0A6H5K807_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K807_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 9.200e-11
Identity = 48/121 (39.67%), Postives = 61/121 (50.41%), Query Frame = 1
Query:   55 GATFAVLPGGKLVYSLDREAFQT------LGLP--AKAVRPASTSRRPGGDK----------------PRRYFGSADLHSKSFRPGKPLHDRLVQCLAK--------GARAETMLVWDGGG 321
            G +FA+LPGG LV SLDRE+FQ       + LP  A A RP    +R G                   P RY  + DL +KSFRPGKPLHDR++ CL+         GA  + ++ W G G
Sbjct:  149 GNSFAILPGGVLVLSLDRESFQASISGFRICLPGEAAATRPNGKGKRAGAGAGSTGGSVGVLGGSAGGPDRYVSAVDLSAKSFRPGKPLHDRVLSCLSSCRWGSGDDGAAVDMVVHWCGSG 269          
BLAST of jgi.p|Trimin1|352394 vs. uniprot
Match: A0A0L0HUD1_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HUD1_SPIPD)

HSP 1 Score: 70.9 bits (172), Expect = 4.300e-10
Identity = 69/265 (26.04%), Postives = 111/265 (41.89%), Query Frame = 1
Query:   61 TFAVLPGGKLVYSLDREAFQTLGLPAKAVRPASTSRRPGGDKPRRYFGSADLHSKSFRPGKPLHDRLVQC-----------LAKGARAETMLVWDGGGAGAFPASLAATRVAMEPHARVFQRVCCPQLRRAALTPALPPRERCR------LIADMFAWLGVVACGLEDLLARPPLEPYVSSFEVPAGLAYGGSGARVCRVRLRGLIPVQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADIAKTTGA-WAAVTTWGFQDCP 801
            TFA+LP G+LV S+ ++ ++TLGL     RP+       GDK  RYF   DL   +F+P   L++R+  C           L      ET L  +     +FP ++ ATRV ++   +  + +  PQ+   A    L  +   +         ++F WLG++ACG   + A   ++P+ S +  P     G + +    VR  G +                    ++R+             D  K  G  WAA+  WGF+D P
Sbjct:  101 TFALLPSGRLVMSVKKDTYETLGL---VGRPSKF-----GDKGNRYFIHIDLAQPAFKPKGKLYERVKWCFTHTLTDTYDFLMSFTDTETRLSSEI----SFPPNVKATRVCIDGVCQTHENIMVPQIGDIAFEDLLNDQNDRKGEIWRDHALNLFEWLGLLACGAARIKAGDNVDPFFSVYSAPEPSKPGTTVS----VRWTGYLTTH----------------QIVRIKDS--------VKDCMKKEGLPWAAILVWGFRDAP 325          
BLAST of jgi.p|Trimin1|352394 vs. uniprot
Match: D0P414_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P414_PHYIT)

HSP 1 Score: 60.8 bits (146), Expect = 1.020e-6
Identity = 68/260 (26.15%), Postives = 102/260 (39.23%), Query Frame = 1
Query:   70 VLPGGKLVYSLDREAFQTLGLPAKAVRPA--STSRRPGGDKPRRYFGSADLHSKSFRPGK--PLHDRLVQCLAKGARAETMLVWDGGGAGAFPASLAA-------TRVAMEPHARVFQRVCCPQL----RRAALTPALPPRERCRL---IADMFAWLGVVACGLEDLLARPPLEPYVSSFEVPAGLAYGGSGARVCRVRLRGLIPVQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADIAKTTGAWAAVTTWGFQD 795
            +LP G+L+  +D + +Q LG+  +    A  +TSR     + ++Y  + DL S +F   +     DR+ +CL+       ML+      G+    L         +RV +      F  V  P+     +  A        +   L   + + + WLGVVACGL DLL R  LE YVS+F           G  +  VR RGL+   +  T    V  +                       +      WAAVT WGF D
Sbjct:  132 LLPSGQLLLLVDADTYQQLGIVGEKYGKAVPATSRSAHVKQAQKYVITLDLTSSTFAGEEVNTFRDRVRKCLSTKLEDLEMLLCAYNQRGSARTILFGDDDQIPRSRVELNAKMTTFSDVFLPKFDAFYKEIAAVEKRGAEDGNTLRTSLQEAYDWLGVVACGLTDLLQRQKLEEYVSTFTGIPDSFESVPGDEITTVRWRGLLAAPFCSTIVEKVQRS-----------------------VKNAELPWAAVTVWGFPD 368          
BLAST of jgi.p|Trimin1|352394 vs. uniprot
Match: A0A329SLA0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SLA0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.380e-6
Identity = 73/262 (27.86%), Postives = 104/262 (39.69%), Query Frame = 1
Query:   70 VLPGGKLVYSLDREAFQTLGLPAKAVRPA--STSRRPGGDKPRRYFGSADLHSKSF--RPGKPLHDRLVQCLAKGARAETMLVWDGGGAGAFPASLAA-------TRVAMEPHARVFQRVCCPQLRRAALTPALPPRERCRLIADM--------FAWLGVVACGLEDLLARPPLEPYVSSFE-VPAGLAYGGSGARVCRVRLRGLIPVQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADIAKTTGAWAAVTTWGFQD 795
            +LP G+L+  +D E +Q LG+  +    A  +TSR     + ++Y  + DL S +F         DR+ +CL+       ML+      G+    L         +RV +      F  V  P+   A  T      ER    +D         + WLG+VACGL DLL R   E YVS+F  +P       SG+ +  VR RGL+   +  T    V     A+    L                     W AVT WGF D
Sbjct:  132 LLPSGQLLLLVDVETYQQLGIVGEKYGKAVPATSRSAHVKRAQKYVITLDLTSPTFAGEGENTFRDRVRKCLSTKLEDLEMLLCAYNQRGSARTILFGDDDQIPRSRVELNAKMTTFSDVFLPKFD-AFYTELNEAEERGEEDSDKLRTSLQEAYDWLGLVACGLTDLLQRQKPEEYVSTFTGIPESFECE-SGSEITTVRWRGLLAAPFCST---IVEKVQRAVKSGEL--------------------PWGAVTVWGFPD 368          
BLAST of jgi.p|Trimin1|352394 vs. uniprot
Match: A0A225WSU4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSU4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 8.040e-6
Identity = 68/261 (26.05%), Postives = 105/261 (40.23%), Query Frame = 1
Query:   70 VLPGGKLVYSLDREAFQTLGLPAKAVRPASTSR-RPGGDKPRRYFGSADLHSKSFRPGKPLH-DRLVQCLAKGARAETMLVWDGGGAGAFPASLAA-------TRVAMEPHARVFQRVCCPQLRRAALTPALPPR--------ERCRL-IADMFAWLGVVACGLEDLLARPPLEPYVSSF-EVPAGLAYGGSGARVCRVRLRGLIPVQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADIAKTTGAWAAVTTWGFQD 795
            +LP G+L+  +D E +Q LG+  +    A  ++ R    + ++Y  + DL S +F   +  H DR+ +CL+       ML+      GA    L         +RV +      F  V  P+    A    L  R        ++ R  + + + WLG+VACGL DLL R  +E YVS+F  +P         + +  VR RGLI   +  T    V     +  +                        W A+T WGF D
Sbjct:  132 LLPSGQLLLLVDAETYQQLGIVGEKYGKAVPAKSRSAHKRAQKYVITLDLTSSTFADEENEHRDRVRKCLSTKLEDLEMLLCAYNQRGAARTILFGDDDQIPRSRVELNAKMTTFDEVFLPKF--DAFYKELGVRHERGDDDGDKLRTSLQETYDWLGLVACGLTDLLQRQKMEEYVSTFIGIPDSFECEPE-SEITTVRWRGLIAAPFCSTIVEKVQRAVKSGEI-----------------------PWGAITVWGFPD 366          
BLAST of jgi.p|Trimin1|352394 vs. uniprot
Match: V9ENX6_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9ENX6_PHYPR)

HSP 1 Score: 57.8 bits (138), Expect = 1.070e-5
Identity = 69/262 (26.34%), Postives = 101/262 (38.55%), Query Frame = 1
Query:   70 VLPGGKLVYSLDREAFQTLGLPAKAVRPA--STSRRPGGDKPRRYFGSADLHSKSFRP--GKPLHDRLVQCLAKGARAETMLVWDGGGAGAFPASLAA-------TRVAMEPHARVFQRVCCPQLRRAALTPALPPRERCR---------LIADMFAWLGVVACGLEDLLARPPLEPYVSSFEVPAGLAYGGSGARVCRVRLRGLIPVQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADIAKTTGAWAAVTTWGFQD 795
            +LP G+L+  +D E +Q LG+  +    +  +TSR     + ++Y  + DL S +F    G    DR+ +CL        ML+      G+    L         +RV +      F  V  P+    A    L   E             + + + WLG+VACGL DLL R   E YVS+F            + +  VR RGL+   +  T    V     A++   L                     WAAVT WGF D
Sbjct:  129 LLPSGQLLLLVDVETYQQLGIVGEKYGKSIPTTSRSAHVKRAQKYVITLDLTSSAFTEEGGNTFRDRVRKCLNSKLEDLDMLLCAYNQRGSARTILFGDDDQIPRSRVELNAKITTFSDVFLPKF--GAFYTELGANEEHAEEDGDTLRTSLQEAYDWLGLVACGLTDLLQRQKPEEYVSTFTGIPDSFECEPDSEITTVRWRGLLAAPFCST---IVEKVQRAVNSGEL--------------------PWAAVTVWGFPD 365          
BLAST of jgi.p|Trimin1|352394 vs. uniprot
Match: A0A8C4ZQZ5_GADMO (Ribonuclease P/MRP 40 subunit n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4ZQZ5_GADMO)

HSP 1 Score: 57.0 bits (136), Expect = 1.770e-5
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 1
Query:   64 FAVLPGGKLVYSLDREAFQTLGLPAKAVRPASTSRRPGGDKPRRYFGSADLHSKSFRPGKPLHDRLVQCLAK 279
            FA+LP GKLV S+D++ ++TLGL  K   P+   RRP G    RY  S DL  ++  PG   H R+++ L +
Sbjct:  132 FALLPNGKLVLSVDKDTYETLGLEGK---PSQYQRRPAG----RYVVSVDLKDRTMSPGGKGHQRVLKALTE 196          
BLAST of jgi.p|Trimin1|352394 vs. uniprot
Match: A0A0P1AFZ1_PLAHL (RPP40 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFZ1_PLAHL)

HSP 1 Score: 55.1 bits (131), Expect = 7.910e-5
Identity = 68/259 (26.25%), Postives = 101/259 (39.00%), Query Frame = 1
Query:   70 VLPGGKLVYSLDREAFQTLGLPAKAVRPA--STSRRPGGDKPRRYFGSADLHSKSFRPGKP--LHDRLVQCLAKGARAETMLVWDGGGAGAFPASLAA------TRVAMEPHARVFQRVCCPQL----RRAALTPALPPRERCRL---IADMFAWLGVVACGLEDLLARPPLEPYVSSFEVPAGLAYGGSGARVCRVRLRGLIPVQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADIAKTTGAWAAVTTWGFQD 795
            +LP G+L+  +D + +Q LGL  +    A  +  R     + ++Y  + DL S +F   K   + D++  CL    +   ML+      GA    L        +R+ +      F  +  P              L  R+  +L   + + + WLG+VACGL DLL R   E YVS+F          S   +  VR RGL+   +  T    V      L V R              D+      W AVT WGF D
Sbjct:  120 LLPSGQLLLLVDVDTYQQLGLVGEKYGKALPAACRSAHQKRAQKYVITLDLTSPTFAEDKENKVRDKVRTCLRTKLQDLNMLLCAYNQRGALRTILFEHDQIHRSRLELNADLTTFSDIFLPHFDAFYSNLCALEELGERDGEKLRTSLHEAYEWLGLVACGLTDLLKREKPEDYVSTFTGIPDSFECESACEITTVRWRGLLAAPFCNTIVKKVQ-----LAVKR-------------GDLP-----WGAVTVWGFPD 355          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352394 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835ZFG0_9STRA2.940e-225100.00Ribonuclease P n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A6H5K807_9PHAE9.200e-1139.67Cyclic nucleotide-binding domain-containing protei... [more]
A0A0L0HUD1_SPIPD4.300e-1026.04Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
D0P414_PHYIT1.020e-626.15Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A329SLA0_9STRA3.380e-627.86Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A225WSU4_9STRA8.040e-626.05Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
V9ENX6_PHYPR1.070e-526.34Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A8C4ZQZ5_GADMO1.770e-541.67Ribonuclease P/MRP 40 subunit n=1 Tax=Gadus morhua... [more]
A0A0P1AFZ1_PLAHL7.910e-526.25RPP40 n=1 Tax=Plasmopara halstedii TaxID=4781 RepI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_118contigContig_118:168237..170250 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352394|estExt_Genemark1.C_Ctg_1180017
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03029
KEGG Pathwayko03008,ko03013,map03008,map03013
KEGG koko:K14530
EC3.1.26.5
DescriptionRibonuclease P 40kDa (Rpp40) subunit
COG categoryS
Max annot lvl4751|Fungi
EggNOG OGs28JWQ@1|root,2QSAV@2759|Eukaryota,39S65@33154|Opisthokonta,3NVM6@4751|Fungi
Evalue7.05e-11
Seed ortholog109760.SPPG_00422T0
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibonuclease P, Rpp40
Ec32 orthologEc-04_004570.1
TranscriptId352716
TrackFilteredModels1
ProteinId352394
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352394gene_13241Tribonema minus UTEX_B_3156 geneContig_118 168237..170250 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13241_1exon_13241_1Tribonema minus UTEX_B_3156 exonContig_118 168237..168291 +
exon_13241_2exon_13241_2Tribonema minus UTEX_B_3156 exonContig_118 168346..168926 +
exon_13241_3exon_13241_3Tribonema minus UTEX_B_3156 exonContig_118 169034..169047 +
exon_13241_4exon_13241_4Tribonema minus UTEX_B_3156 exonContig_118 169932..170250 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13241CDS_13241Tribonema minus UTEX_B_3156 CDSContig_118 168237..168291 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352394Trimin1|352394|estExt_Genemark1.C_Ctg_1180017Tribonema minus UTEX_B_3156 polypeptideContig_118 168237..170250 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13241 ID=mRNA_13241|Name=jgi.p|Trimin1|352394|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=969bp|location=Sequence derived from alignment at Contig_118:168237..170250+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCACTGCTACAGAGTGGACGGCCCTCTGCTTGAGATCCTCGAGTGGCT
TAGAGGCGCCACCTTCGCTGTCCTGCCTGGCGGCAAGCTCGTCTACAGCC
TTGACAGAGAAGCCTTTCAAACCCTCGGCCTGCCAGCTAAGGCGGTGCGC
CCTGCCAGCACCTCGAGGCGGCCCGGCGGCGACAAGCCTCGCCGCTACTT
CGGCTCCGCAGACCTGCACTCGAAGTCATTCAGGCCAGGCAAGCCCCTGC
ACGACAGACTCGTGCAGTGCCTGGCAAAGGGCGCGCGCGCCGAGACCATG
CTGGTCTGGGACGGCGGCGGCGCTGGCGCGTTTCCCGCCTCTCTCGCCGC
GACGCGCGTGGCCATGGAGCCGCACGCGCGCGTCTTCCAACGCGTCTGCT
GCCCGCAGCTGCGGCGCGCCGCGCTCACACCGGCGCTGCCGCCGCGCGAG
CGCTGCCGGCTGATCGCTGACATGTTTGCGTGGCTGGGGGTGGTGGCGTG
CGGCCTGGAGGACTTGCTGGCGCGGCCGCCGCTGGAGCCGTACGTGTCGT
CGTTCGAGGTGCCGGCGGGGCTGGCGTACGGAGGCAGCGGCGCGCGCGTG
TGCCGCGTACGCCTGCGCGGCCTTATACCGGTGCAGTATGCGCGCACCAG
AGCAGCAGCAGTGACGCCAACGTCCGCCGCGCTGCACGTTTTGCGTCTCT
GTTCAAAGGCGGCGCAGGCGGCGGCGGCGACGGCCGCCGACATCGCCAAG
ACCACGGGCGCGTGGGCAGCGGTAACGACATGGGGGTTTCAGGACTGCCC
CGGGGTCGTGGACGGCCGCGGCGAAGCGGTGGCGCACGCAGGCGGCGACA
GCATACTGGCAGTTATTGCGATAGGGGGAGGGGGGGAGGGGCAGGGGCAG
GACGTCGCTGGAGGGGGGGGCGTATCGCTTGCTGTCGTGGACGCTCAGTG
CTTACGGCCGCTGCCATAA
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protein sequence of jgi.p|Trimin1|352394

>Trimin1|352394|estExt_Genemark1.C_Ctg_1180017 ID=Trimin1|352394|estExt_Genemark1.C_Ctg_1180017|Name=jgi.p|Trimin1|352394|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=323bp
MHCYRVDGPLLEILEWLRGATFAVLPGGKLVYSLDREAFQTLGLPAKAVR
PASTSRRPGGDKPRRYFGSADLHSKSFRPGKPLHDRLVQCLAKGARAETM
LVWDGGGAGAFPASLAATRVAMEPHARVFQRVCCPQLRRAALTPALPPRE
RCRLIADMFAWLGVVACGLEDLLARPPLEPYVSSFEVPAGLAYGGSGARV
CRVRLRGLIPVQYARTRAAAVTPTSAALHVLRLCSKAAQAAAATAADIAK
TTGAWAAVTTWGFQDCPGVVDGRGEAVAHAGGDSILAVIAIGGGGEGQGQ
DVAGGGGVSLAVVDAQCLRPLP*
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mRNA from alignment at Contig_118:168237..170250+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13241 ID=mRNA_13241|Name=jgi.p|Trimin1|352394|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2014bp|location=Sequence derived from alignment at Contig_118:168237..170250+ (Tribonema minus UTEX_B_3156 )
ATGCACTGCTACAGAGTGGACGGCCCTCTGCTTGAGATCCTCGAGTGGCT TAGAGGTGCGGATCACCCTCAGACATGCGCAGTTGCCCACATTGCACCGC TTGACGGAGGCGCCACCTTCGCTGTCCTGCCTGGCGGCAAGCTCGTCTAC AGCCTTGACAGAGAAGCCTTTCAAACCCTCGGCCTGCCAGCTAAGGCGGT GCGCCCTGCCAGCACCTCGAGGCGGCCCGGCGGCGACAAGCCTCGCCGCT ACTTCGGCTCCGCAGACCTGCACTCGAAGTCATTCAGGCCAGGCAAGCCC CTGCACGACAGACTCGTGCAGTGCCTGGCAAAGGGCGCGCGCGCCGAGAC CATGCTGGTCTGGGACGGCGGCGGCGCTGGCGCGTTTCCCGCCTCTCTCG CCGCGACGCGCGTGGCCATGGAGCCGCACGCGCGCGTCTTCCAACGCGTC TGCTGCCCGCAGCTGCGGCGCGCCGCGCTCACACCGGCGCTGCCGCCGCG CGAGCGCTGCCGGCTGATCGCTGACATGTTTGCGTGGCTGGGGGTGGTGG CGTGCGGCCTGGAGGACTTGCTGGCGCGGCCGCCGCTGGAGCCGTACGTG TCGTCGTTCGAGGTGCCGGCGGGGCTGGCGTACGGAGGCAGCGGCGCGCG CGTGTGCCGCGTACGCCTGCGCGGCCTTATACCGGTGCAGGTGAGGGGGG GCGGAAGCGCGCAGCTGCGGCATGCCTCATGCGGCACCATGCGGCCAAGT CGGCTCACACCCTCGTAAACCGCCGCGCTGAATGCGTGCCCCCCCAGTAT GCGCGCACCAGGTACTCCGGCTCTGCGACTGCGAGCACCCTGGGAGGCGT GCTGCCCAGTTGCAGCTGAAGCTGATTGTATGCCGCCGTTGCGCGCAGCG GGCAAGCGATGCCCGGTGGCCGCTGCTGCTGCGGGGCGGTGGCTGACTCA CCTGCGCGCAGCGCAACTTGTCTTTGCGACACTCACGCACCATCGTACTG CCAAATCAAGCGCAAGCAGCGCTCAGATTGTGCGCAACAATTTTGGATAA TCATCTGCGTATGACATGCTTGCGCTCACGGGGCGGGAACTTCAGGGCTC GCAGCAGCAGGCCTGGATTTGCACGGCACTTTGACAGCAGCTGTGGCATG CGGACCCATCGCGCTGTGCGCTGACGTCCGCATTGTCATGCTGCAGTTCG TGTTGTCCCGCTCTGGGGCCCAGCGTGCTGCAGTCAGCCTGCTGTTTCTG ATCGGTGCGCTCTCTACGACGCCGCCGCCGCACATGCGCATAGCATGCTT CCTGATGGGCATGCAGCCGCAGTGATCGCAGAGTGTATTACTTTGCAATG GCTCATGCGCATGGCATGCTTCCCGGTGTAGGCGCGGCCGCCGCGTCTGC AGCGGTGCATGCAATGCCCTTCACGATCTACACGCACCACGTTGCCACTG TGCGGGATTGCAATGGCTGTTGGTCTCTTGCATCCACCTGCGCCAGGTGC TGCAGCAGCCAAATGCGCCATCTGTGATGCCAATTTATGCGCCTCACTGA GCACAAGCCCCCCGTCCCCAGTGCACCTGCGTCGTCGTCGCCGCCGGCAG CCGAGATTTTTGCATGCTCGAACCCGCAAGGCGCCGCTCGCCTAGTAGAC TGCTGGCCTCTTTGCAAGCATTCACGCCATGCCGCGCTGCCCCAGAGCAG CAGCAGTGACGCCAACGTCCGCCGCGCTGCACGTTTTGCGTCTCTGTTCA AAGGCGGCGCAGGCGGCGGCGGCGACGGCCGCCGACATCGCCAAGACCAC GGGCGCGTGGGCAGCGGTAACGACATGGGGGTTTCAGGACTGCCCCGGGG TCGTGGACGGCCGCGGCGAAGCGGTGGCGCACGCAGGCGGCGACAGCATA CTGGCAGTTATTGCGATAGGGGGAGGGGGGGAGGGGCAGGGGCAGGACGT CGCTGGAGGGGGGGGCGTATCGCTTGCTGTCGTGGACGCTCAGTGCTTAC GGCCGCTGCCATAA
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Coding sequence (CDS) from alignment at Contig_118:168237..170250+

>mRNA_13241 ID=mRNA_13241|Name=jgi.p|Trimin1|352394|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=969bp|location=Sequence derived from alignment at Contig_118:168237..170250+ (Tribonema minus UTEX_B_3156 )
ATGCACTGCTACAGAGTGGACGGCCCTCTGCTTGAGATCCTCGAGTGGCT
TAGAGGCGCCACCTTCGCTGTCCTGCCTGGCGGCAAGCTCGTCTACAGCC
TTGACAGAGAAGCCTTTCAAACCCTCGGCCTGCCAGCTAAGGCGGTGCGC
CCTGCCAGCACCTCGAGGCGGCCCGGCGGCGACAAGCCTCGCCGCTACTT
CGGCTCCGCAGACCTGCACTCGAAGTCATTCAGGCCAGGCAAGCCCCTGC
ACGACAGACTCGTGCAGTGCCTGGCAAAGGGCGCGCGCGCCGAGACCATG
CTGGTCTGGGACGGCGGCGGCGCTGGCGCGTTTCCCGCCTCTCTCGCCGC
GACGCGCGTGGCCATGGAGCCGCACGCGCGCGTCTTCCAACGCGTCTGCT
GCCCGCAGCTGCGGCGCGCCGCGCTCACACCGGCGCTGCCGCCGCGCGAG
CGCTGCCGGCTGATCGCTGACATGTTTGCGTGGCTGGGGGTGGTGGCGTG
CGGCCTGGAGGACTTGCTGGCGCGGCCGCCGCTGGAGCCGTACGTGTCGT
CGTTCGAGGTGCCGGCGGGGCTGGCGTACGGAGGCAGCGGCGCGCGCGTG
TGCCGCGTACGCCTGCGCGGCCTTATACCGGTGCAGTATGCGCGCACCAG
AGCAGCAGCAGTGACGCCAACGTCCGCCGCGCTGCACGTTTTGCGTCTCT
GTTCAAAGGCGGCGCAGGCGGCGGCGGCGACGGCCGCCGACATCGCCAAG
ACCACGGGCGCGTGGGCAGCGGTAACGACATGGGGGTTTCAGGACTGCCC
CGGGGTCGTGGACGGCCGCGGCGAAGCGGTGGCGCACGCAGGCGGCGACA
GCATACTGGCAGTTATTGCGATAGGGGGAGGGGGGGAGGGGCAGGGGCAG
GACGTCGCTGGAGGGGGGGGCGTATCGCTTGCTGTCGTGGACGCTCAGTG
CTTACGGCCGCTGCCATAA
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