mRNA_13233 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352388
Unique Name	mRNA_13233
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352388 vs. uniprot
Match: A0A835ZF96_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF96_9STRA)

HSP 1 Score: 831 bits (2147), Expect = 1.370e-290
Identity = 829/829 (100.00%), Postives = 829/829 (100.00%), Query Frame = 1

Query:    1 MVDKRVKDSSRDGRDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGXGDSRGKERSTXXXXXXXXXXSGGARSKSPAKSRSXXXXXXXXXXXXXXXXXXXGSXXXAXEKESSRDKERGSDSRRSARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRGSIGQDESAPSTTVAILGLAAGVTERMLTRALERFRPIAVRVPSGGRGAAFADFASAADAQDAVRARLEVGGAPARAEFARSGAHGGGGRDRAWECGKCAVLNFADRAVCYCCRGTRDGXXXXXXXXXXXXXXXXXXXXXXXXXVGSRGGRSRDALAALESSAATNVLLLRGLSLATTAEQVHRIRDFVPVITEKLRVYAPIAAVRVLHDPRTRAPCGAAAVEFATREHASHTLSTAASAHPPLAIAGIEPALAYARVAKAGSARSXXXXXXXXXXXXXXXXXXXXXXALMEADARSKELEKLRGTLGEVRAGPGGVVPAIFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKAKKEEQTYSWPPSFEAAGAAYVLDPASAYFYXXXXXXXXXPKSRLYFINEAWYTHVPGGAPPFVLASXXXXXXXXXXXASSEPNGGRELAAAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERADAGETLAAARXXXXXXXXXXXAAKAAQLSAAEAKVEAALREANALLAKQQHAKHAAXXXXXXXXXXXXXXXXXXXXXXXXXAGVGFACLLCARGFATAEQLQKHERKSKLHADNLAKREAGLL 2487
            MVDKRVKDSSRDGRDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGXGDSRGKERSTXXXXXXXXXXSGGARSKSPAKSRSXXXXXXXXXXXXXXXXXXXGSXXXAXEKESSRDKERGSDSRRSARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRGSIGQDESAPSTTVAILGLAAGVTERMLTRALERFRPIAVRVPSGGRGAAFADFASAADAQDAVRARLEVGGAPARAEFARSGAHGGGGRDRAWECGKCAVLNFADRAVCYCCRGTRDGXXXXXXXXXXXXXXXXXXXXXXXXXVGSRGGRSRDALAALESSAATNVLLLRGLSLATTAEQVHRIRDFVPVITEKLRVYAPIAAVRVLHDPRTRAPCGAAAVEFATREHASHTLSTAASAHPPLAIAGIEPALAYARVAKAGSARSXXXXXXXXXXXXXXXXXXXXXXALMEADARSKELEKLRGTLGEVRAGPGGVVPAIFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKAKKEEQTYSWPPSFEAAGAAYVLDPASAYFYXXXXXXXXXPKSRLYFINEAWYTHVPGGAPPFVLASXXXXXXXXXXXASSEPNGGRELAAAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERADAGETLAAARXXXXXXXXXXXAAKAAQLSAAEAKVEAALREANALLAKQQHAKHAAXXXXXXXXXXXXXXXXXXXXXXXXXAGVGFACLLCARGFATAEQLQKHERKSKLHADNLAKREAGLL
Sbjct:    1 MVDKRVKDSSRDGRDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGXGDSRGKERSTXXXXXXXXXXSGGARSKSPAKSRSXXXXXXXXXXXXXXXXXXXGSXXXAXEKESSRDKERGSDSRRSARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRGSIGQDESAPSTTVAILGLAAGVTERMLTRALERFRPIAVRVPSGGRGAAFADFASAADAQDAVRARLEVGGAPARAEFARSGAHGGGGRDRAWECGKCAVLNFADRAVCYCCRGTRDGXXXXXXXXXXXXXXXXXXXXXXXXXVGSRGGRSRDALAALESSAATNVLLLRGLSLATTAEQVHRIRDFVPVITEKLRVYAPIAAVRVLHDPRTRAPCGAAAVEFATREHASHTLSTAASAHPPLAIAGIEPALAYARVAKAGSARSXXXXXXXXXXXXXXXXXXXXXXALMEADARSKELEKLRGTLGEVRAGPGGVVPAIFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAKAKKEEQTYSWPPSFEAAGAAYVLDPASAYFYXXXXXXXXXPKSRLYFINEAWYTHVPGGAPPFVLASXXXXXXXXXXXASSEPNGGRELAAAQAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERADAGETLAAARXXXXXXXXXXXAAKAAQLSAAEAKVEAALREANALLAKQQHAKHAAXXXXXXXXXXXXXXXXXXXXXXXXXAGVGFACLLCARGFATAEQLQKHERKSKLHADNLAKREAGLL 829

[Close]

BLAST of jgi.p|Trimin1|352388 vs. uniprot
Match: D7G7L5_ECTSI (RanBP, RRM1, C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L5_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.000e-5
Identity = 28/65 (43.08%), Postives = 34/65 (52.31%), Query Frame = 1

Query: 1636 AKAKKEEQTYSWPPSFEAAGAAYVLDPASAYFYXXXXXXXXXPKSRLYFINEAWYTHVPGGAPPF 1830
            A  +K+     WPP FE AGAAY+ D  S YFY         P+S+LY     WY+H PG  P F
Sbjct:  344 AALQKKLNPPDWPPPFEEAGAAYLFDGPSGYFYESTTGVYYDPRSKLYCKGMVWYSHTPGQDPAF 408

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352388 vs. uniprot

BLAST of jgi.p|Trimin1|352388 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZF96_9STRA	1.370e-290	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7G7L5_ECTSI	1.000e-5	43.08	RanBP, RRM1, C2H2 zinc finger protein n=2 Tax=Ecto...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_118	contig	Contig_118:113890..119121 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352388\|estExt_Genemark1.C_Ctg_1180011
Description	RNA splicing
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG0154@1\|root,KOG0154@2759\|Eukaryota
Evalue	1.57e-06
Seed ortholog	2880.D7G7L5
Hectar predicted targeting category	other localisation
TranscriptId	352710
Track	FilteredModels1
ProteinId	352388

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352388	gene_13233	Tribonema minus UTEX_B_3156	gene	Contig_118 113890..119121 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352388	Trimin1\|352388\|estExt_Genemark1.C_Ctg_1180011	Tribonema minus UTEX_B_3156	polypeptide	Contig_118 113970..119121 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13233_8	exon_13233_8	Tribonema minus UTEX_B_3156	exon	Contig_118 113890..114859 -
exon_13233_7	exon_13233_7	Tribonema minus UTEX_B_3156	exon	Contig_118 115339..115789 -
exon_13233_6	exon_13233_6	Tribonema minus UTEX_B_3156	exon	Contig_118 115860..115889 -
exon_13233_5	exon_13233_5	Tribonema minus UTEX_B_3156	exon	Contig_118 116246..116425 -
exon_13233_4	exon_13233_4	Tribonema minus UTEX_B_3156	exon	Contig_118 116563..116631 -
exon_13233_3	exon_13233_3	Tribonema minus UTEX_B_3156	exon	Contig_118 117044..117256 -
exon_13233_2	exon_13233_2	Tribonema minus UTEX_B_3156	exon	Contig_118 117859..118015 -
exon_13233_1	exon_13233_1	Tribonema minus UTEX_B_3156	exon	Contig_118 118622..119121 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_13233	UTR3_13233	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_118 113890..113969 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13233	CDS_13233	Tribonema minus UTEX_B_3156	CDS	Contig_118 118622..119121 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_118:113890..119121-
coding sequence from alignment at Contig_118:113890..119121-

spliced messenger RNA

>mRNA_13233 ID=mRNA_13233|Name=jgi.p|Trimin1|352388|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2570bp|location=Sequence derived from alignment at Contig_118:113890..119121- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGGACAAGCGAGTGAAAGACTCCAGCAGAGATGGCAGAGACAGGGA
GAAGGAGCGGGAGCGAGACAGCAAGAGTAGCAGGAGGCGCAGCAGAAGTA
GAGAAAAGGGGGGCAGCAGCAGTGCAGCCGCAGGCGACCGCAGGCACTCT
GCTGCTAGCGGCAGCAGGTCTCACCGGAGCCGCAGCAGGAGCAAGGACAG
GAGTCGCAAACGCAGCTCCAGCAGGGGCAGGGGGGACTCGCGCGGCAAGG
AGAGGAGCACCAAGCGGGCCCGCAGCAGAAGCAAGGACAGGAGCGGAGGA
GCTCGCTCCAAGAGCCCAGCCAAGTCTCGGTCAGCCAAGGACAGCAGCGG
GAAGGACAGCAGCGCCAAGGACGCGGACAGGAAGAGCGGCGGCTCGAGCA
AGGGCGCGGGCGAGAAGGAGAGCAGCAGGGATAAGGAGCGCGGCAGCGAC
TCTCGAAGATCTGCGCGCTCTCGGTCCCGGTCACGCTCAGCAGGCAACAG
CAGCAGCAGCAGACGGCGCGAGAGGGACGCGGACGGCGGCAGTGGCCACG
GCGGCGCCGGCGCCGGCGCGCGGCGCGGCAGCATCGGCCAGGATGAGTCA
GCGCCCAGCACCACGGTGGCGATACTGGGGCTCGCGGCGGGCGTCACGGA
GCGAATGCTCACCCGCGCGCTCGAGCGATTCAGACCTATCGCGGTGCGCG
TGCCCAGCGGCGGGCGCGGCGCGGCGTTCGCGGACTTTGCGTCCGCGGCG
GACGCGCAGGACGCCGTGCGCGCGCGCCTCGAGGTTGGCGGCGCGCCCGC
GCGCGCCGAGTTTGCGCGCAGCGGCGCGCACGGCGGCGGCGGGCGCGACC
GCGCGTGGGAGTGCGGCAAGTGCGCCGTGCTGAACTTTGCGGATCGCGCA
GTGTGCTACTGCTGCCGCGGGACGCGCGACGGTGGCGAATGCGCCGGGCT
GAACTTTGCGGACCGCACGGTGTGCTACCGCTGCCCCGGGACGCGCGACG
GCGGCGAAGTCGGGTCCCGCGGCGGGCGCTCGCGCGACGCACTCGCCGCA
CTAGAGTCGAGCGCTGCCACCAATGTGCTGCTGCTACGCGGACTGTCGCT
CGCTACCACAGCCGAGCAGGTCCACAGAATCCGCGACTTCGTGCCAGTCA
TCACGGAGAAGCTGCGCGTTTACGCGCCCATCGCCGCGGTGCGCGTCCTG
CACGACCCGCGCACGCGCGCGCCGTGCGGCGCCGCCGCCGTCGAGTTTGC
GACGCGCGAGCACGCGTCGCACACGCTCAGCACCGCCGCCTCCGCGCACC
CGCCGCTCGCCATCGCGGGCATTGAACCCGCGCTCGCGTACGCGCGTGTC
GCCAAGGCCGGCAGCGCGCGCAGCAGCAGCGGCGGCGATGGCGGCAGCGG
CGGCGCGCTGACGGCAGCGGCGGTGGAGGCGGCGGCGGCGGCGCTCATGG
AGGCAGACGCGCGGTCTAAGGAGCTAGAGAAGCTGCGGGGGACGCTGGGG
GAGGTGCGCGCGGGGCCTGGGGGGGTCGTGCCCGCGATATTTGCTGCGGC
GATGGCGGCGGCGGCGGCGGCGCGCGCGGCGCCGGCGGCGGACGATGCCG
CCGCGGAAGAAGAGCTCGCGGCCGCCGTCGCCAAGGCCAAGGCCAAAAAA
GAGGAGCAGACGTACAGCTGGCCGCCGTCGTTCGAGGCTGCGGGCGCCGC
GTACGTGCTCGACCCCGCCAGCGCCTACTTCTATGAGGCCGCCAGCGGCG
CGTACTACGACCCCAAGTCCAGGCTGTACTTCATCAACGAGGCGTGGTAC
ACGCACGTGCCGGGCGGCGCGCCGCCGTTCGTGCTCGCCAGCGGAGGCGA
CGACGCCGCCGGCGGCGGCGGCGATGCGTCCTCCGAGCCAAACGGCGGCC
GGGAACTGGCGGCGGCGCAGGCACCGGCAGCGGCAGCGCCCACGCCTGCG
GCATCTGCGGTGGCCCTCAAGAGGAAGACCAAGCTGTCGTTCGGGCTTAA
GGCTGTCGCGGCAGCTGGCGGCGTCGCCAAGCGGCGCGGCAGCGGCGACG
GCGACAGCAGCAGCGACAGCGATGACAGTGCCGGCGCAGGTGAGGGCGGC
GGCGGCAGCGAAAGAGCGGACGCCGGCGAGACACTCGCCGCCGCCAGGGC
TGCCGCCGCACAGGAGGCGGAGCGGCAGCGCGCCGCGAAGGCGGCGCAGC
TCTCGGCAGCAGAGGCCAAAGTGGAGGCGGCGCTGCGCGAGGCCAACGCG
CTGCTCGCCAAGCAGCAGCACGCCAAGCACGCGGCGGCGGAGGCGGCGGC
AGCAGCGCGGCGCAGCAGCGGGGACGTGCTGCCGGAAGCAGCGGCGGCGG
CCGCGGCGGCGGCGGGGGTGGGCTTTGCGTGCCTCCTGTGCGCGCGCGGG
TTCGCAACCGCGGAGCAGCTGCAGAAGCACGAGCGCAAGAGCAAGCTGCA
CGCCGACAACCTCGCAAAGCGCGAGGCGGGGCTGTTGTGACGCGCTCTCT
TGGAGCGCGGTCGTTGCTGCGAATGAATTCACATGATACCAGAGGGAATG
AACATCGGTGTAGTACTCGA

protein sequence of jgi.p|Trimin1|352388

>Trimin1|352388|estExt_Genemark1.C_Ctg_1180011 ID=Trimin1|352388|estExt_Genemark1.C_Ctg_1180011|Name=jgi.p|Trimin1|352388|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=830bp
MVDKRVKDSSRDGRDREKERERDSKSSRRRSRSREKGGSSSAAAGDRRHS
AASGSRSHRSRSRSKDRSRKRSSSRGRGDSRGKERSTKRARSRSKDRSGG
ARSKSPAKSRSAKDSSGKDSSAKDADRKSGGSSKGAGEKESSRDKERGSD
SRRSARSRSRSRSAGNSSSSRRRERDADGGSGHGGAGAGARRGSIGQDES
APSTTVAILGLAAGVTERMLTRALERFRPIAVRVPSGGRGAAFADFASAA
DAQDAVRARLEVGGAPARAEFARSGAHGGGGRDRAWECGKCAVLNFADRA
VCYCCRGTRDGGECAGLNFADRTVCYRCPGTRDGGEVGSRGGRSRDALAA
LESSAATNVLLLRGLSLATTAEQVHRIRDFVPVITEKLRVYAPIAAVRVL
HDPRTRAPCGAAAVEFATREHASHTLSTAASAHPPLAIAGIEPALAYARV
AKAGSARSSSGGDGGSGGALTAAAVEAAAAALMEADARSKELEKLRGTLG
EVRAGPGGVVPAIFAAAMAAAAAARAAPAADDAAAEEELAAAVAKAKAKK
EEQTYSWPPSFEAAGAAYVLDPASAYFYEAASGAYYDPKSRLYFINEAWY
THVPGGAPPFVLASGGDDAAGGGGDASSEPNGGRELAAAQAPAAAAPTPA
ASAVALKRKTKLSFGLKAVAAAGGVAKRRGSGDGDSSSDSDDSAGAGEGG
GGSERADAGETLAAARAAAAQEAERQRAAKAAQLSAAEAKVEAALREANA
LLAKQQHAKHAAAEAAAAARRSSGDVLPEAAAAAAAAAGVGFACLLCARG
FATAEQLQKHERKSKLHADNLAKREAGLL*

mRNA from alignment at Contig_118:113890..119121-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13233 ID=mRNA_13233|Name=jgi.p|Trimin1|352388|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5232bp|location=Sequence derived from alignment at Contig_118:113890..119121- (Tribonema minus UTEX_B_3156 )
ATGGTGGACAAGCGAGTGAAAGACTCCAGCAGAGATGGCAGAGACAGGGA
GAAGGAGCGGGAGCGAGACAGCAAGAGTAGCAGGAGGCGCAGCAGAAGTA
GAGAAAAGGGGGGCAGCAGCAGTGCAGCCGCAGGCGACCGCAGGCACTCT
GCTGCTAGCGGCAGCAGGTCTCACCGGAGCCGCAGCAGGAGCAAGGACAG
GAGTCGCAAACGCAGCTCCAGCAGGGGCAGGGGGGACTCGCGCGGCAAGG
AGAGGAGCACCAAGCGGGCCCGCAGCAGAAGCAAGGACAGGAGCGGAGGA
GCTCGCTCCAAGAGCCCAGCCAAGTCTCGGTCAGCCAAGGACAGCAGCGG
GAAGGACAGCAGCGCCAAGGACGCGGACAGGAAGAGCGGCGGCTCGAGCA
AGGGCGCGGGCGAGAAGGAGAGCAGCAGGGATAAGGAGCGCGGCAGCGAC
TCTCGAAGATCTGCGCGCTCTCGGTCCCGGTCACGCTCAGCAGGCAACAG
GTCAGTGAATGGTGCCCGCGAGCCATGTGCGTGTGCGGTTTCATGCAAGA
GGCTACTTGTGTCAGGTTCTGGCCCTCGTGGTTCATTTTACCCTGCTGTG
ATGAGACAAGCTGCCAAGTTAGCGCGCCATAACCAGTATAGCTGGTTTGC
CATGATACTGGCCTGGACGACAGTACAGAGGAATGCCGATAACGGTGGCC
GAGAACACTTATGGTCAAGCATCACTTTCCGGATGCAATGCTTGCAGCTG
ACAGCTGGTGCATAGTTTTGCTGATCAGGCAGGTCATCCGTGAATCCAGT
ACACATTTTTTTACGGATTTTGTGGATTCACTCTGCCAGCTGGTGCTGTC
TGTGGATCACCCCGCATGTCATGCCATGAGCAGGGCACCTCCAAGTGCTG
CAGCCAACAGGTAAGCGCGCTGCGCCGTCGTGCATTGACGGACGCGTCGG
CACGCTCAGGCCACGCCTGCGAACGCCGCACACCCTCTCCGGCATGCACA
CCGCCCCCGCCGGTCTGCGTCACACGGGATGGCTCTCACACCCGCCCTCT
GTCGCGTCGTGCACGCGCGCAATGCACCACGCACGCACACACACGCACAC
ACTTAGCAGCAGCAGCAGACGGCGCGAGAGGGACGCGGACGGCGGCAGTG
GCCACGGCGGCGCCGGCGCCGGCGCGCGGCGCGGCAGCATCGGCCAGGAT
GAGTCAGCGCCCAGCACCACGGTGGCGATACTGGGGCTCGCGGCGGGCGT
CACGGAGCGAATGGTTTGTACATGCGACCCTTGCGCAGCGCGCAGGGCCG
TGGGGTGCCATTGAGAGCGGTACACAATGGCAAACCACAAAGCTCAGGGC
GCATCTGCGCTGCTGGTTGCAGCAGCGCTGGCAGGGCACTTTAATGCAGT
GACATGCAGCAAGCAGCCACCAGCGCTGTGATGCTGAAACTGGTGCCAGC
GTCGGTGAGCGTAGTCAACGTAATATCTTCACATCAGGCGCCATCGCTTC
CGTTTCTGGAGATCAGCATGTCTCGGTCAAGTAGTCGGCAGGCGTTGCTC
GTGCAGACTGCTATCATCAATGACGCGCGCGCACCGCAAGATCAGGGCTG
GCCATCGAGCTGCGTGATCCAGCGCAAAATGGAGTCGCAGCGCAGCGCTC
TGCTGCCGTTCATGGCAGCGGGGCTACGCGTACGCTCACAGGCACCGCCT
TCCCTGCCGGCAGTAGCACGATGCTGGTGCGGAAGCAATGGGGCCCCTCC
CGCACCACCAATATTCACACCGTCGCTCGCGGCCCGCCGCGCGCTCGGCC
CTCCCCCCTGCCCCGTCCCCCTGCCCCCCTCCCCCCCGCCCCCCGCCCCC
CCTGCGCGGCGACAGCTCACCCGCGCGCTCGAGCGATTCAGACCTATCGC
GGTGCGCGTGCCCAGCGGCGGGCGCGGCGCGGCGTTCGCGGACTTTGCGT
CCGCGGCGGACGCGCAGGACGCCGTGCGCGCGCGCCTCGAGGTTGGCGGC
GCGCCCGCGCGCGCCGAGTTTGCGCGCAGCGGCGCGCACGGCGGCGGCGG
GCGCGACCGCGCGTGGGAGTGCGGCAAGGTGCGCGCGCTGCCGGGCATGC
GGTTGGCCGTAGGATTCTTGCTGAGGGTTTAGCGCCGAGCACTTTCCTGG
TGGCGAATCTGACGACGGGCGCGGCGAATCGGGTCAACAGACCCCCTTGT
CCTCGTGGTGACCAAATTTGCCTGCCGACGGTGTTGCTTTGCACATCCAT
CGCTCCGCCCACGCGGGCAGCCCATCCGCAGCAAGCACGGACGTACATGA
ACGCTGGCTGCGTGCTGTGTGGCGTGACATGCTGCGCATCCAGTGCACTA
GTACTTCATGCTTCAAGTACAGCGTCACCATCACTGCCACCACATGTGCT
CGCAGTCTCGTGTCATAGAGCGACTCACCATACAGCAACTACACTCACCC
AAGCTGTGCGCATGCTGCGTATCGTTGCGCCGTTGGACAGTGCGCCGTGC
TGAACTTTGCGGATCGCGCAGTGTGCTACTGCTGCCGCGGGACGCGCGAC
GGTGGCGAAGTCGGGTCCCGCGGCGGTGTTATCACAATCCACTACCACCA
CATGTGCCCACAGTCTTGTGTCGTAGTGCACCTCTCCATACAACACATTC
GTTCACTCACGCCCTGCGCCGCTGCGTATTGTTGGCCGTCGAACAGTGCG
CCGGGCTGAACTTTGCGGACCGCACGGTGTGCTACCGCTGCCCCGGGACG
CGCGACGGCGGCGAAGTCGGGTCCCGCGGCGGGCGCTCGCGCGACGCACT
CGCCGCACTAGAGTCGAGCGCTGCCACCAATGTGCTGCTGCTACGCGGAC
TGTCGCTCGCTACCACAGCCGAGCAGGTGCGTTTGGAGGTGCACAGTAAA
AGGGAGAGTCACACTTTCTCGTGTGAGTGTGCGAGTCGCCGCTGCCAGTG
CATGTGCTGCGCTTGTGCGCACTGCCGCCACTCGTTGTGCCGGAGCGGGT
GAGTGAAGTTTGCTGATTCTGGACTGCAAGTTGTCAATGTGACTGAGGTT
TCTCTGATGCAGCACTCAAGGTTGCAGTGTGCACCACAACCGCCATCAGA
TCAAGCTGGCGCCCTGCAAGTTGTTCTCTGACGATAATACATCGAGTACA
ACCTCTCTCGCAGCGCGGTACAGTGCAGTGGTCGCCTCACTGCCTGCTAT
GTAGGCTGCTGTCGAACGCGCCGCCTTCGCAGGTCCACAGAATCCGCGAC
TTCGTGCCAGTCGTACAGGCGCCTTGTTACAGTACCTTACCCTACCGTGA
TGCCGTCTGCCGCTTACGCGCTGCGCACGCAGATCACGGAGAAGCTGCGC
GTTTACGCGCCCATCGCCGCGGTGCGCGTCCTGCACGACCCGCGCACGCG
CGCGCCGTGCGGCGCCGCCGCCGTCGAGTTTGCGACGCGCGAGCACGCGT
CGCACACGCTCAGCACCGCCGCCTCCGCGCACCCGCCGCTCGCCATCGCG
GGCATTGAACCCGCGCTCGCGTACGCGCGTGTCGCCAAGGCCGGCAGCGC
GCGCAGCAGCAGCGGCGGCGATGGCGGCAGCGGCGGCGCGCTGACGGCAG
CGGCGGTGGAGGCGGCGGCGGCGGCGCTCATGGAGGCAGACGCGCGGTCT
AAGGAGCTAGAGAAGCTGCGGGGGACGCTGGGGGAGGTGCGCGCGGGGCC
TGGGGGGGTCGTGCCCGCGATATTTGCTGCGGCGATGGCGGCGGCGGCGG
CGGCGCGCGCGGCGCCGGCGGCGGACGATGCCGGTGGGTCGTGTGTTCGC
GTGACGCGCCATGCGTGCATCGCACGCTTTGATGCACCATGTACTTGGCT
TTGGGCATGTGTTCGTTGTGAAGGATGTACTATGAAGCATGACGGTGCAC
TACGGCTGCCATCATGCGAGGCGTTGTGTGTAGGTTTTCCTGGGTGGTGC
GCTGTAACCGCTGCCTGGGCAGTGGTGACACGGTGCTCCGGCGCTTCTGG
GTCGCCCAGGGCCATCGGTGGCACTTGCGTGCCTGCGGCCCGTGAGCTCT
GCTCACGTCAGTCGGCACCTCGCTTTCGCCGAGCAGAGAGGAGCATCAAT
TGGCGAGCTTTTTCCTTTGTCACGAGCCATGCTGTACCTCCAGCCTCACG
GTGAGCGGTGGAGGTCCAGCGCCCCTCAACCCCCCCCCCCCCCTCCCTCA
ATGCACCGTCACTCCACCAACTGCGCCCCATGACCATGCCTCGACGCGCT
GCTCACGCGCAGCCGCGGAAGAAGAGCTCGCGGCCGCCGTCGCCAAGGCC
AAGGCCAAAAAAGAGGAGCAGACGTACAGCTGGCCGCCGTCGTTCGAGGC
TGCGGGCGCCGCGTACGTGCTCGACCCCGCCAGCGCCTACTTCTATGAGG
CCGCCAGCGGCGCGTACTACGACCCCAAGTCCAGGCTGTACTTCATCAAC
GAGGCGTGGTACACGCACGTGCCGGGCGGCGCGCCGCCGTTCGTGCTCGC
CAGCGGAGGCGACGACGCCGCCGGCGGCGGCGGCGATGCGTCCTCCGAGC
CAAACGGCGGCCGGGAACTGGCGGCGGCGCAGGCACCGGCAGCGGCAGCG
CCCACGCCTGCGGCATCTGCGGTGGCCCTCAAGAGGAAGACCAAGCTGTC
GTTCGGGCTTAAGGCTGTCGCGGCAGCTGGCGGCGTCGCCAAGCGGCGCG
GCAGCGGCGACGGCGACAGCAGCAGCGACAGCGATGACAGTGCCGGCGCA
GGTGAGGGCGGCGGCGGCAGCGAAAGAGCGGACGCCGGCGAGACACTCGC
CGCCGCCAGGGCTGCCGCCGCACAGGAGGCGGAGCGGCAGCGCGCCGCGA
AGGCGGCGCAGCTCTCGGCAGCAGAGGCCAAAGTGGAGGCGGCGCTGCGC
GAGGCCAACGCGCTGCTCGCCAAGCAGCAGCACGCCAAGCACGCGGCGGC
GGAGGCGGCGGCAGCAGCGCGGCGCAGCAGCGGGGACGTGCTGCCGGAAG
CAGCGGCGGCGGCCGCGGCGGCGGCGGGGGTGGGCTTTGCGTGCCTCCTG
TGCGCGCGCGGGTTCGCAACCGCGGAGCAGCTGCAGAAGCACGAGCGCAA
GAGCAAGCTGCACGCCGACAACCTCGCAAAGCGCGAGGCGGGGCTGTTGT
GACGCGCTCTCTTGGAGCGCGGTCGTTGCTGCGAATGAATTCACATGATA
CCAGAGGGAATGAACATCGGTGTAGTACTCGA

Coding sequence (CDS) from alignment at Contig_118:113890..119121-

>mRNA_13233 ID=mRNA_13233|Name=jgi.p|Trimin1|352388|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2490bp|location=Sequence derived from alignment at Contig_118:113890..119121- (Tribonema minus UTEX_B_3156 )
ATGGTGGACAAGCGAGTGAAAGACTCCAGCAGAGATGGCAGAGACAGGGA
GAAGGAGCGGGAGCGAGACAGCAAGAGTAGCAGGAGGCGCAGCAGAAGTA
GAGAAAAGGGGGGCAGCAGCAGTGCAGCCGCAGGCGACCGCAGGCACTCT
GCTGCTAGCGGCAGCAGGTCTCACCGGAGCCGCAGCAGGAGCAAGGACAG
GAGTCGCAAACGCAGCTCCAGCAGGGGCAGGGGGGACTCGCGCGGCAAGG
AGAGGAGCACCAAGCGGGCCCGCAGCAGAAGCAAGGACAGGAGCGGAGGA
GCTCGCTCCAAGAGCCCAGCCAAGTCTCGGTCAGCCAAGGACAGCAGCGG
GAAGGACAGCAGCGCCAAGGACGCGGACAGGAAGAGCGGCGGCTCGAGCA
AGGGCGCGGGCGAGAAGGAGAGCAGCAGGGATAAGGAGCGCGGCAGCGAC
TCTCGAAGATCTGCGCGCTCTCGGTCCCGGTCACGCTCAGCAGGCAACAG
CAGCAGCAGCAGACGGCGCGAGAGGGACGCGGACGGCGGCAGTGGCCACG
GCGGCGCCGGCGCCGGCGCGCGGCGCGGCAGCATCGGCCAGGATGAGTCA
GCGCCCAGCACCACGGTGGCGATACTGGGGCTCGCGGCGGGCGTCACGGA
GCGAATGCTCACCCGCGCGCTCGAGCGATTCAGACCTATCGCGGTGCGCG
TGCCCAGCGGCGGGCGCGGCGCGGCGTTCGCGGACTTTGCGTCCGCGGCG
GACGCGCAGGACGCCGTGCGCGCGCGCCTCGAGGTTGGCGGCGCGCCCGC
GCGCGCCGAGTTTGCGCGCAGCGGCGCGCACGGCGGCGGCGGGCGCGACC
GCGCGTGGGAGTGCGGCAAGTGCGCCGTGCTGAACTTTGCGGATCGCGCA
GTGTGCTACTGCTGCCGCGGGACGCGCGACGGTGGCGAATGCGCCGGGCT
GAACTTTGCGGACCGCACGGTGTGCTACCGCTGCCCCGGGACGCGCGACG
GCGGCGAAGTCGGGTCCCGCGGCGGGCGCTCGCGCGACGCACTCGCCGCA
CTAGAGTCGAGCGCTGCCACCAATGTGCTGCTGCTACGCGGACTGTCGCT
CGCTACCACAGCCGAGCAGGTCCACAGAATCCGCGACTTCGTGCCAGTCA
TCACGGAGAAGCTGCGCGTTTACGCGCCCATCGCCGCGGTGCGCGTCCTG
CACGACCCGCGCACGCGCGCGCCGTGCGGCGCCGCCGCCGTCGAGTTTGC
GACGCGCGAGCACGCGTCGCACACGCTCAGCACCGCCGCCTCCGCGCACC
CGCCGCTCGCCATCGCGGGCATTGAACCCGCGCTCGCGTACGCGCGTGTC
GCCAAGGCCGGCAGCGCGCGCAGCAGCAGCGGCGGCGATGGCGGCAGCGG
CGGCGCGCTGACGGCAGCGGCGGTGGAGGCGGCGGCGGCGGCGCTCATGG
AGGCAGACGCGCGGTCTAAGGAGCTAGAGAAGCTGCGGGGGACGCTGGGG
GAGGTGCGCGCGGGGCCTGGGGGGGTCGTGCCCGCGATATTTGCTGCGGC
GATGGCGGCGGCGGCGGCGGCGCGCGCGGCGCCGGCGGCGGACGATGCCG
CCGCGGAAGAAGAGCTCGCGGCCGCCGTCGCCAAGGCCAAGGCCAAAAAA
GAGGAGCAGACGTACAGCTGGCCGCCGTCGTTCGAGGCTGCGGGCGCCGC
GTACGTGCTCGACCCCGCCAGCGCCTACTTCTATGAGGCCGCCAGCGGCG
CGTACTACGACCCCAAGTCCAGGCTGTACTTCATCAACGAGGCGTGGTAC
ACGCACGTGCCGGGCGGCGCGCCGCCGTTCGTGCTCGCCAGCGGAGGCGA
CGACGCCGCCGGCGGCGGCGGCGATGCGTCCTCCGAGCCAAACGGCGGCC
GGGAACTGGCGGCGGCGCAGGCACCGGCAGCGGCAGCGCCCACGCCTGCG
GCATCTGCGGTGGCCCTCAAGAGGAAGACCAAGCTGTCGTTCGGGCTTAA
GGCTGTCGCGGCAGCTGGCGGCGTCGCCAAGCGGCGCGGCAGCGGCGACG
GCGACAGCAGCAGCGACAGCGATGACAGTGCCGGCGCAGGTGAGGGCGGC
GGCGGCAGCGAAAGAGCGGACGCCGGCGAGACACTCGCCGCCGCCAGGGC
TGCCGCCGCACAGGAGGCGGAGCGGCAGCGCGCCGCGAAGGCGGCGCAGC
TCTCGGCAGCAGAGGCCAAAGTGGAGGCGGCGCTGCGCGAGGCCAACGCG
CTGCTCGCCAAGCAGCAGCACGCCAAGCACGCGGCGGCGGAGGCGGCGGC
AGCAGCGCGGCGCAGCAGCGGGGACGTGCTGCCGGAAGCAGCGGCGGCGG
CCGCGGCGGCGGCGGGGGTGGGCTTTGCGTGCCTCCTGTGCGCGCGCGGG
TTCGCAACCGCGGAGCAGCTGCAGAAGCACGAGCGCAAGAGCAAGCTGCA
CGCCGACAACCTCGCAAAGCGCGAGGCGGGGCTGTTGTGA