mRNA_13050 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 2.170e-137
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1

Query:   61 MHSGGSQGSESPDRLGRWTVGGGLSPSTEQELGGRPLLLKFLPTVKAWDMRTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            MHSGGSQGSESPDRLGRWTVGGGLSPSTEQELGGRPLLLKFLPTVKAWDMRTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH
Sbjct:    1 MHSGGSQGSESPDRLGRWTVGGGLSPSTEQELGGRPLLLKFLPTVKAWDMRTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199

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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.100e-63
Identity = 114/175 (65.14%), Postives = 127/175 (72.57%), Query Frame = 1

Query:  133 SPSTEQELGGRPLLLKFLPTVKAWDMRTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            S S   +LG R  L  FLP V          MP  PP L ESCG +LIMGT GG GMG +FG+FLGAMGDMQP+Q+INGREVPQAP  EQAR AY  T  RSL M +NFASFSAIFM SECVIEKMRGK DMMNSVY GC TG AFG+K GP+ A  GC+GMA FSA++D +MGH
Sbjct:   21 SRSLHPQLGSR--LPFFLPWVPRPAAGAADAMP-TPPVLTESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192

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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA)

HSP 1 Score: 147 bits (372), Expect = 7.100e-40
Identity = 82/165 (49.70%), Postives = 102/165 (61.82%), Query Frame = 1

Query:  166 PLLLKFLPTVKAWDMRTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            P L+ ++PT            PP    + ESCG +  +G  GG  MGLL G+FLGAM DM P + VING+EVPQAPL EQAR     T  + +  ++NFA  + +F  SEC++EK RGKHD+ N V  GC+TG A   K GP+ A  GC G AAFS VIDAVMGH
Sbjct:   61 PYLIPWMPTFNG-----AQEPPPDFSFMTESCGIKSAIGLFGGAAMGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220

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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A6U3RYY1_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RYY1_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.060e-37
Identity = 82/164 (50.00%), Postives = 100/164 (60.98%), Query Frame = 1

Query:  169 LLLKFLPTVKAWDMRTGGT-MPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMG 654
            L  K LP  + W   +G   +PP    L ESCG +  +G  GG  MGLL G+FLGAM DM P + VI G+EVPQAPL EQ R     T  +S+   + FA  + +F  SEC++EK RGK D+ NSV  GC+TG A   KAGP  A  GC G AAFS VID+VMG
Sbjct:  100 LTSKSLPYFQPWKPTSGPEQLPPDFTFLSESCGGKAAIGVFGGGVMGLLMGVFLGAMSDMTPPVTVIGGKEVPQAPLKEQMRTTMRATAEKSMYWCRQFAFITGVFSGSECLVEKYRGKTDVWNSVLSGCVTGAAMQAKAGPSSAAFGCGGFAAFSLVIDSVMG 263

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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A448Z601_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z601_9STRA)

HSP 1 Score: 139 bits (349), Expect = 7.340e-36
Identity = 80/165 (48.48%), Postives = 98/165 (59.39%), Query Frame = 1

Query:  169 LLLKFLPTVKAWDMRTGGT-MPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            L  K LP    W    G T +PP    L + C  +  +G  GG  MGLL G+FLGA+ D QP IQV  G++VPQAP  EQAR     T  +S+   +NFA  + +F  SEC++EK RGKHDM N V  GCITG A    AGP+ A  GC G AAFS VID +MG+
Sbjct:  106 LTRKSLPYFMPWKTSGGPTEIPPNYAWLMDGCAGKAAIGVFGGGVMGLLMGVFLGALSDSQPPIQVAGGKDVPQAPFKEQARYTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAHAGPQAAAVGCGGFAAFSIVIDKIMGN 270

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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA)

HSP 1 Score: 136 bits (342), Expect = 9.130e-36
Identity = 70/136 (51.47%), Postives = 87/136 (63.97%), Query Frame = 1

Query:  253 ESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            ESC  R ++G+  G  MGL+ G+FLGAMGD+ P I  + G+E PQ PL EQAR AY  T  RS+G A++F + +A+F  +ECVIEK RG+HD  N V  GC  G       GP  A  GC G AAFSA  +AVMGH
Sbjct:   56 ESCVGRAVLGSFAGGAMGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191

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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: B7FQ85_PHATC (Mitochondrial import inner membrane translocase subunit TIM22 (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ85_PHATC)

HSP 1 Score: 134 bits (337), Expect = 1.000e-35
Identity = 74/136 (54.41%), Postives = 88/136 (64.71%), Query Frame = 1

Query:  247 LGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVM 651
            L  SCG +  +G  GG  MGLL G+FLGAM D  P +QVI GREVPQAPL EQ +     T  +SL   +NFA  + +F  SEC++EK RGKHD+ NSV  GCITG A   K+GP+ A  GC G AAFS VID  M
Sbjct:    1 LTNSCGGKAAIGVIGGGVMGLLMGVFLGAMSDATPPVQVIAGREVPQAPLREQIKVTMRATGDKSLYWCRNFAFITGVFGGSECLVEKYRGKHDVWNSVASGCITGAALQAKSGPQAAAVGCGGFAAFSLVIDTFM 136

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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: K0TBX0_THAOC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBX0_THAOC)

HSP 1 Score: 137 bits (346), Expect = 1.050e-35
Identity = 76/165 (46.06%), Postives = 99/165 (60.00%), Query Frame = 1

Query:  169 LLLKFLPTVKAWDMRTGGT--MPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMG 654
            L ++ LP  + W         +PP    L ESCG++  +G  GG  MGL+ G+FLGA+ DM P + +I G+EVPQAPL EQ R     T  +SL   + FA  + +F  SEC++EK RGKHD+ NSV  GCITG A   K GP+ +  GC G A FS VID+ MG
Sbjct:   79 LTMRGLPYPQPWARANASPAELPPNFDWLSESCGSKAAIGVIGGGAMGLVMGVFLGALTDMTPPVTIIEGKEVPQAPLKEQMRTTLRATADKSLYWCRQFAFITGVFGGSECLVEKYRGKHDVWNSVVSGCITGAAMQAKQGPQASAAGCGGFAVFSLVIDSFMG 243

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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: W7TL11_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL11_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.430e-35
Identity = 71/140 (50.71%), Postives = 89/140 (63.57%), Query Frame = 1

Query:  238 PPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMG 654
            PP   E+C  R + G   G G+G++ G+FLGAMGDM P I +INGRE PQAP GEQ R AY  T  R    A+NF + +A+F   +CV+EK RGKHD  N+V  GC  G A   K GP+ A  GC G AAFS +++ VMG
Sbjct:   66 PPNPQENCVGRSVFGAVAGAGLGVMMGIFLGAMGDMSPAIPIINGREAPQAPAGEQLRLAYRATFERCGHWARNFMALTALFSGVDCVVEKFRGKHDAYNAVISGCGVGAALSAKQGPQAACLGCAGFAAFSGIMEVVMG 205

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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A1Z5K7I7_FISSO (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7I7_FISSO)

HSP 1 Score: 135 bits (341), Expect = 8.890e-35
Identity = 79/162 (48.77%), Postives = 97/162 (59.88%), Query Frame = 1

Query:  178 KFLPTVKAWDMRTGGTMPPQPPA-LGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            + LP    W      T PP   + L  SC  ++ +G  GG GMG L G+FLGA+ D  P +QVI GR+VPQAPL EQ R     T  +S   A NFA  + +F  SEC++EK RGK+D+ NSV  GCITG A   KAGP+ A  GC G AAFS VID+ M H
Sbjct:  102 RSLPYPLPWKPVASPTEPPPDFSWLTGSCAGKVAIGVIGGAGMGALMGLFLGALSDTTPPVQVIGGRDVPQAPLREQMRVVMRATAEKSRYWAGNFAFITGVFAGSECLVEKYRGKNDLWNSVASGCITGAAMQAKAGPQSAALGCGGFAAFSLVIDSFMHH 263

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|100891 vs. uniprot

BLAST of jgi.p|Trimin1|100891 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
A0A836C710_9STRA	2.170e-137	100.00	Mitochondrial import inner membrane translocase su...	[more]
A0A6H5KF19_9PHAE	1.100e-63	65.14	Mitochondrial import inner membrane translocase su...	[more]
A0A7S2P255_9STRA	7.100e-40	49.70	Mitochondrial import inner membrane translocase su...	[more]
A0A6U3RYY1_9STRA	1.060e-37	50.00	Mitochondrial import inner membrane translocase su...	[more]
A0A448Z601_9STRA	7.340e-36	48.48	Mitochondrial import inner membrane translocase su...	[more]
A0A7S1TYW7_9STRA	9.130e-36	51.47	Mitochondrial import inner membrane translocase su...	[more]
B7FQ85_PHATC	1.000e-35	54.41	Mitochondrial import inner membrane translocase su...	[more]
K0TBX0_THAOC	1.050e-35	46.06	Mitochondrial import inner membrane translocase su...	[more]
W7TL11_9STRA	1.430e-35	50.71	Mitochondrial import inner membrane translocase su...	[more]
A0A1Z5K7I7_FISSO	8.890e-35	48.77	Mitochondrial import inner membrane translocase su...	[more]

Pages

Properties


Property Name	Value
ProteomeId	Trimin1\|100891\|CE100890_55
KEGG TC	3.A.8.1
BRITE	ko00000,ko00001,ko01000,ko02000,ko03029
KEGG rclass	RC00017
KEGG Reaction	R02029
KEGG Pathway	ko00564,ko01100,map00564,map01100
KEGG ko	ko:K01094,ko:K17790
EC	3.1.3.27
GOs	GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005886,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0017038,GO:0019866,GO:0022804,GO:0022857,GO:0022884,GO:0030943,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042721,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072655,GO:0072657,GO:0090150,GO:0090151,GO:0098796,GO:0098798,GO:0098800,GO:1904680,GO:1990542
Preferred name	TIMM22
Description	Mitochondrial import inner membrane translocase subunit
COG category	O
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG5596@1\|root,KOG3225@2759\|Eukaryota
Evalue	1.43e-65
Seed ortholog	2880.D7G569
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Mitochondrial import inner membrane translocase subunit TIM22 homolog
Ec32 ortholog	Ec-14_006420.1
TranscriptId	101213
Track	FilteredModels1
ProteinId	100891

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_96:151630..158754-
coding sequence from alignment at Contig_96:151630..158754-

spliced messenger RNA

>mRNA_13050 ID=mRNA_13050|Name=jgi.p|Trimin1|100891|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=877bp|location=Sequence derived from alignment at Contig_96:151630..158754- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AAGAAAGAGGAGCCGAGCCCGACAACGCCCCATACAGAGAGAGGCAGCAC
TCTGCTCAGAATGCACAGCGGAGGCTCACAAGGATCCGAGAGCCCAGACC
GGCTTGGACGGTGGACAGTGGGTGGTGGCCTCAGCCCATCAACGGAGCAA
GAGCTTGGAGGACGACCTTTGCTGCTTAAATTTCTACCAACCGTGAAAGC
ATGGGACATGCGCACGGGGGGGACGATGCCGCCGCAACCGCCAGCGCTGG
GAGAGAGCTGCGGGGCTCGGTTGATTATGGGCACTGCAGGAGGGTTTGGG
ATGGGGCTGCTGTTCGGCATGTTCTTGGGTGCCATGGGGGACATGCAGCC
CATACAGGTCATCAACGGGCGGGAGGTGCCGCAGGCGCCGCTCGGGGAAC
AGGCCAGAGCCGCGTACCTGGGCACCAAATCGCGCAGCCTGGGCATGGCC
AAGAACTTTGCCAGCTTCTCCGCCATCTTCATGGCGAGCGAGTGCGTCAT
TGAGAAGATGCGCGGCAAGCACGACATGATGAACAGCGTCTACGGCGGGT
GCATCACAGGCATGGCGTTTGGCATTAAGGCCGGGCCAAAAGAAGCCGTG
GGCGGCTGCCTAGGCATGGCAGCGTTCAGCGCCGTCATCGACGCCGTCAT
GGGCCATTGAACACAAAAAGCTGTTGCATTTTACGGAACCGAATCAAAAG
ACCGTGGAGCTCTAGGCGACGAGGCGTGGTCAGCCGCGCAAGTGCGTTCC
ACAAGTGAGCGTGGCCGCCGCTGCTGCAGCCACGTTCGCCAGCGGCGGCG
GCGCGTGTGCACGGTGCGCCTGTACAGATCCTGTTGAACCTGTAAATGAA
CTTCCGCTGATGCGCGGCGCCTTTTCT

protein sequence of jgi.p|Trimin1|100891

>Trimin1|100891|CE100890_55 ID=Trimin1|100891|CE100890_55|Name=jgi.p|Trimin1|100891|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=200bp
MHSGGSQGSESPDRLGRWTVGGGLSPSTEQELGGRPLLLKFLPTVKAWDM
RTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQV
INGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKM
RGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH*

mRNA from alignment at Contig_96:151630..158754-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13050 ID=mRNA_13050|Name=jgi.p|Trimin1|100891|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7125bp|location=Sequence derived from alignment at Contig_96:151630..158754- (Tribonema minus UTEX_B_3156 )
AAGAAAGAGGAGCCGAGCCCGACAACGCCCCATACAGAGAGAGGCAGCAC
TCTGCTCAGAATGCACAGCGGAGGCTCACAAGGATCCGAGAGCCCAGACC
GGCTTGGACGGTGGACAGTGGGTGGTGGCCTCAGCCCATCAACGGAGCAA
GAGCTTGGAGGACGACCTTTGCTGCTTAAAGTACGTCGCGCTGAACATGC
TGCGCCCGCTGAAGGACATGTGTGCCCGGATTCGACACACGTGTGCATTC
GTCGTAGCCAGACCGCAGCGCGTTTTGTTGGGAGCACTTGGTGTGCCTTT
CGATTCCTATTTCGAGCGAGGACAGGGCAGAGTCACAAAGCACAATAACA
GTCTCCGGCAGTAGGCGTTATTATCAGCGAGATTGGCTCTGCGCTGTGCT
TAACGCTAATGTAACGAGAGATTGGCTCTGCGCTGTGCTTAACGCTAATG
TAACGAGGAAGCGGCACACACATAGATGGCTTGGCTCAACGAAGAGGTGC
GAGGCAAGAAATGCTCAGGAGCATGCTTTACAGGCTTTTTTGCGAGCTGG
CGATCTGAGAACGGCATGCGCCTGAGATGTGCCGCCTGACGGGTCTGTTG
CGAAATATCTGGCACATCTACGTAGTTCGTGTCGAAGGATTGCTCGTATG
TAAAGGCGTCGTCAGGGCAGCAGCGCTAGGATGCCCTGGCAGCAGAGATC
GCCAACAGTTGAAGCGAGGCGTGTGTGCTCTCAGGGCTAGGGTTGGCGTC
CCTGTTCTATGAGCGAATGCTGCGCATACTGTATGTATGGTGTTAGCTCA
TGCCAGGGTCATACTCGCACCATGAAGGCACTTGCGGCTAACCACTCCTT
GTCACCTAAGTAGAGCTCTACGATCTTCTGATTCGTTTCCATATGGTACT
GTACTGCATGCGAATCCTCGGACTTAGCTAGTGCACGCCACAGGCACTTT
TTGCCACCTGTGACAGTTCGGTCCGCTTCGCCTAGCTTCGGACACAAGTT
CATGGCTGCCGTGTAACCCTGGCATACGTGTGATGCCAGGCTTGCCCTGC
CGCTCTTACATCACCACAGCGCTGTTCAGCGCTGCAGCAGGCGAAGCGCA
GTCAGCGCGGATTCCACAGTCGCCTGTGCGGCGTCACACGACGCTCGTGT
CTCTCGGCTACATACACACCCCTCCTCATCTCACCGCGCTCAGGAGTCGC
TGCCAGCATCCCGAGCCCTGCTGCGTTGCATGCTTGTACTGTAGGTATGT
GCATGCACATTGCCGCCCCCCACGCTTATGTATGCTCAGGCTGCCCCCCC
CCCCCCCCGTGCACTCCACAGTTTCTACCAACCGTGAAAGCATGGGACAT
GCGCACGGGGGGGACGATGCCGCCGCAACCGCCAGCGCTGGGAGAGAGCT
GCGGGGCTCGGTTGATTATGGGCACTGCAGGAGGTGAGCTCGTTCGCCCC
CCCGTGCTGACGTGACGCTTTGCCCTAACCCTACTCCTAATGGTGATCCT
AACCTTCTTGCTCGCCCCCACTTGCTGGTGCCTGACGCTCTGCCCTAACC
CTACCCCTAACCCTGATGGTAACCTGTCTTGCTCGCCCCCCCTTGCTGGT
GCATGACGCTCTGCCCTAACCTCACCTGTACCTCTAATCGCAATCCTGTT
TGCTGAGGTAAAGCCTGTGGAGTGGCAGTTTCCGCTCGCGCGAAGATGAA
GGCAGTGCATAGCGCGGTGTGTTGATGGGTTGAAGCTGCTGCTATAGCCG
GCAAGGGCGGTTGAGGAGCGGCACTGCGGCACCTGCGGCAGACGCATGTT
TCATGCACGAGTTCTTGTTGGAATTGCCAATGCTGCGCAGTCCATTCAGC
TCCATGCATAGCTTGTCACTTCACATCACAGTGGTCCACACCGTGCGCGT
GACGTGACGTCTTGCGGCACCATCATTTGCACACTCCTCTGTACGATACT
TCAAGTGGAAGTGTTGGAACTGCAGCTGGTGCTGGGATAGCCCATGCTGC
GTAGCCCATTCAGGGTTATCACGTGCCGCTCCCGTACACGGCGCAGCAAC
AATGACAGCGGACGTTGGCGTTGCTCGCGATGTCAATTGTGCGACACACG
TTGCTTGGCATATCAGTTATATGACATCACATCTCGGGGGTCCACATCGC
TTCACATCACAGCGATACATACCGTATGCGTAAGGCCAGGTCCGGCGGCA
CCATCACTTGCGCACACGCCTGTGAGGTACTTCAAGTACTTGCGCGTTAC
GCCCGATGGCGACGCTGCTTGCGGGCGCGGTGTGGTGCACGCATGCCGCC
GGCGCGCCGCAATGCGCAAGGAGCATTATTTGCGAGGTCTGCCCGCGAGA
CGCGTGAGATGAGTGCTGCTGTAACGCGAAAGCCGGCGGACGCGCAGCAG
CGATCAGGAAGCAGCAAGCACCTAACCCTAACCCCATCCTAAACCTAATC
TCATCCCTAAGTTGGCACAGTGCTCAGCTGATGACACCACAGTAGCCCAC
CCCCCGCCGCCGGCATTCTTGACGCTGTTGGCATGTTGCTCATGCGATGA
ACCTACGGCTGCCCAACCTTCACCGCCAGCATTGTTGACGCTGCTTGCGT
GGCTCTTAGCGGACGGCGCTACAGCAGCTCACCCTCCGCTGCTGCCGGCA
TTCCTGTGTGATTTTCGCGGCAGCGCTGTTCGAACCCTAACCTTAACCCT
AACCCATCGCTCACCCGATGACACCACAGCGCCGTCTTTCCGCCGCCGCT
TGCATTCCTGCGTCGTCTGCAGCAGCGCTGTTCCCACAAGTTTGCAACAT
CAAAAGGAATAAAAAAATAATTATTGATTACCCCCACCACTGCAGAACGA
GTGACTAAATTGCTCAGTGGATGACACTGCGGTGCCCACCCTCCCCTCCG
CCGCTGCCGGCACTCCTGCGTTTCTTGCAGCAGCGCTCTTCGCATAGTGG
CAATGATGTTGCTCAGCTGAAGACACTAAAGTAGCTCGCCCTCGCTCCTG
CGTTCTGTTGCAGGGTTTGGGATGGGGCTGCTGTTCGGCATGTTCTTGGG
TGCCATGGGGGACATGCAGCCCATACAGGTCATCAACGGGCGGGAGGTGC
CGCAGGCGCCGCTCGGGGAACAGGTGTGCGCCGCGTGCCATGCTTCACAG
GCTTCTACGATGCCAAACTTCAATCGCACAGGCTACTTCAACTGTCCAGC
TGCGCGCTGCCTGCCGCCCCTGACTGTGCTTTAAATACTCCCCCCCCCCC
ATATGTCTTGAAACATCCTCGGGAGCTCAGAGCCAGTTTATGCACATCAG
TTATTGAGCAATTGCGTCCGTATCGATACAAGCAGGTCACATCTCAAGCT
TGCCGATACTACCCTCAAAATCGCAACCTGCTTAAGTTCTTCTACTCGTA
TAGTGCCATACTGCAACCGTGCGTGCGTGCTGCCACCTCTGCACATTCTA
CACGGGGGCTTCGGAACGTGTTTTCCGCCCTGTTCACGTCTCCGAAGGCT
GGTGCTGTGGTGTCGCAGCTTGCGTGTGCAACACAACACAGAGCAGTAGA
AATGGCTCAAAGGCATCACTCCCTGCACAGAGCGTTGCGAACAGCAGGCA
TCGCTCAGCATGTGCTGCGGTCCAACATCAGCTGCGTGAGCGGGGCAGGG
CCTGTCCCACTGAGCACTGCTGCATCATTTAGTTGCTGAGCGCTGCCTGT
CAACTGCCGCTGTCGCTGTTGCCGTCGTCGCGGCTGCCGGTAACAGGGCA
CTGCGCCCGCCTGTGCCTCTTGCGACCGCACCTGTCGCACCCGCCAACGA
AGGGATGCGTGTTTCGGCAGCGCAACGAGACATAAATGCAGTTTTTTTGA
CCCAAACGAAGGGATGCGTTTTTCGGCAGCGCAACGAGACATAAATGCAG
TTTTTTTGACCCAAGAATATGGCCACCGGTTTTGGGAGGGTCTCCCGCAG
GAATGAGGTGCTAGGTGCATCCTCATACCTTCTGCGGCCAAGCACGGCAA
TGTTAGGCATACAGCTTTGACATAGACACAACATTATTATTGTGACGTGA
TCCTCGTGTGGCACATGGCTGAAGCTTTTGACGCACGTCGTTGCGCTGCT
CGCCGTAGGCGTTTCGGCGAATCGTAGGATCCCTACGACACGCTCGCACA
TGCAGGGCATGCAAACGCTCACACTTATGGGGCAAATGCAGTTGTTAGCA
TTTTAAAGTCCTGTTCTGTATGTATGTATGTAGCGTAGGACTCTCATGAC
GCGCTTCGCACGTGCAGTGGCGTGCACAAGCTCACACTCGCAGGGTGATC
AAAATTCGATCGGTACTGTAGAGTCCTGTGCAGTATGTATGCATAGCGCT
GCATGACCGTGCTGCGTCGTCATGAGATGTAGGTAATCGTCCACGCCGCA
AGGGCGCGTTAGAAGCGAAGACTTCACGAGGACACGCATTGATGTCACCT
CATGCGGAAACTTCACACCAAGTCTCATCTTGTCACCGCTACAATGTGCA
CACCATCCGTGTGCAATTATGCTGACAAGCTCCCTTTTGCTGGGGCTCAC
TGATGCTGCATGACACTAACCCTAACCTAACCCTCATCCTGACACCCCCT
TCCGGTCTGTGCGTCGCGATAACCCTCATCCCAACCTTAAACCCTAACCC
AGGCCAGAGCCCCTACAAAGGACACGCATCGACATGACTCAACGCTGACA
CCCTGCAGCGAATCTCACTTTGCCACCGCCACAGTGTGTGCACCATTTGT
GTATGATTTTGCGGACATGCTTACTTACGCTGAGGCTGACTGCCCTTGCC
CGACACCCGCTTCTGGTTTCCATGGTTGCGATGACCCCAACCCTAACCCC
AAACCCTAACCCTAATTCAGGCCAGAGCCGCGTACCTGGGCACCAAATCG
CGCAGCCTGGGCATGGCCAAGAACTTTGCCAGCTTCTCCGCCATCTTCAT
GGCGAGCGAGTGCGTCATTGAGAAGATGCGCGGCAAGCACGGTGAGGCTG
CGAATTAGGTTTAGGTATAGGGTTAGGGTTAGGGTTGAATGCGCAGCAAG
CACGGCAAGGCCTGAATCAGCGTCAAGTTTATGTTTAGAGGTAGGGTTAG
GCTTAGGGTGGAGGCCAGCTAACCCTAATCCTATGTCATGTGGAGAACAT
GAATGCGCACGGCAGGCACGGTGAGGCTCAGGGCTTGCTATGCGTAAAAG
CCAGGGTTAGGGTGAAGGCTAGTGACTCAGTGAGTGAGTGAGGGAGTGAG
TCATGGAGCATTGCACGGCAAACATGGCGAGGTGTAGTGGCAGGGTTTGA
CATGGTCGTCGTTGACTACTGATGCGCAGGAACTAGAGCACGGTTACCGT
CAGCTTCTGTCAATACCTCAAGTACGCTGTGCGTCACCCCACTTTGCATA
CGCACGCCGCTGCTGCTCGCGCGCTTCGCCCGTCCTCGCTGCGCCGGGCA
TGCATTACTAGGGGTATGTACGTATGTCAAACACGCCCCCTCGCAAGTCC
GCTGCGCAGCGCGCCTGCACCGCTGGTGGTAGTCACTTGCGCGCTGCACG
TCAAAATGACACCTTTTATCACTGGTTGCGGTGGAAGTTGAAGCGGCGTC
GGCACCAGTGCTGCGATAGCACCGACGAACGCGGACTTGGCATTACTGCA
ACAGGCTCGCGTCTGGCAACAGATACTTCACGAAGCAGCTGACTCCGGAG
TGCTTGCCGACCAGCGCTGCGATCGCAATGGTGAACGCAAACTTCGGAAT
TGCGAAATACTCTCTGCTGGCACCAGATGCTTTATGAAGCAGTCGACGCG
TAGGGTCAGTGTTAGGGCCAGGGTGAGCTTGCCGATCACATGCTACTTGA
AGTATATCGCCCACGGGGGTCGGGGCTTCTGGTGCTGCGCCTGCTCGCGT
CTTGCGGCGTTCATATTTGAAGTCGATGCTGCATCGCAAACTCCACGCGC
TCAATCTAACCCTAACCCTAACCCTAACCCTGATGATTTTTATTCCACGT
ACAAGTTTAACTCGTCCGCCACGTGTTGAAACCTGTAGAATGTTCTTGCA
AAGTGAAACCTCCACCTAAGTTGTAAACTCGTCCGCCACGTGTTGCAACC
TGTAAAATGTTCTTGCAAAGTGAAACCTCCACCTATGTTGTGCACACACA
CACACACACACACACATACACATATACTTGACTGCAGACTGTCGCGCACT
ATGCGGCGCACAGGGGCGAGGGGCGGACGCGATCTCACATGCACCGTTTT
CGGGCCAGCTCATGACTGGGTTTGCCACTGGTCATCGCGACCGCTCATGC
GCGCGCACTGTGCGCTCTTCCCTCCGCTGCATTGAACTTGACAACGTGAC
ATGAGGTCGATGGTGAAGATGAAGTTGAACTTGTCTACATTTTTGGGCCA
GCTCATGGCGCGGCGTCGCCATTGGTCATCCCAACCGTTCATGCGCAAGC
ATCGTGCGCTCTTCCCTCCGCATTGAACTTGACTCAGAACTAACGTGGCG
TGAGGTCGGTGTTGAAGATGAAATTGAACACTGGCCATCACGACCGCTCA
TGCGCGAGCATCGGGCACCCTTCCCTCCGCTTTGAACTTGACTACGCACA
ACGTGGCGTGAGGTCGGCGTTGAAGATGAAATTGAACGCTGGTCACCACG
ACCATTCATGCGTGATCATCATGCGTTCTTCCCTCTGCCACACATTGAAC
TCGACTACGCACCAACATGACGTGATATAGATGTTGAAGTTAAAAGTTGA
ACTTATCTACTGCTCTCGCAGACATGATGAACAGCGTCTACGGCGGGTGC
ATCACAGGCATGGCGTTTGGCATTAAGGCCGGGCCAAAAGAAGCCGTGGG
CGGCTGCCTAGGCATGGCAGCGTTCAGCGCCGTCATCGACGCCGTCATGG
GCCATTGAACACAAAAAGCTGTTGCATTTTACGGAACCGAATCAAAAGAC
CGTGGAGCTCTAGGCGACGAGGCGTGGTCAGCCGCGCAAGTGCGTTCCAC
AAGTGAGCGTGGCCGCCGCTGCTGCAGCCACGTTCGCCAGCGGCGGCGGC
GCGTGTGCACGGTGCGCCTGTACAGATCCTGTTGAACCTGTAAATGAACT
TCCGCTGATGCGCGGCGCCTTTTCT

Coding sequence (CDS) from alignment at Contig_96:151630..158754-

>mRNA_13050 ID=mRNA_13050|Name=jgi.p|Trimin1|100891|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=600bp|location=Sequence derived from alignment at Contig_96:151630..158754- (Tribonema minus UTEX_B_3156 )
ATGCACAGCGGAGGCTCACAAGGATCCGAGAGCCCAGACCGGCTTGGACG
GTGGACAGTGGGTGGTGGCCTCAGCCCATCAACGGAGCAAGAGCTTGGAG
GACGACCTTTGCTGCTTAAATTTCTACCAACCGTGAAAGCATGGGACATG
CGCACGGGGGGGACGATGCCGCCGCAACCGCCAGCGCTGGGAGAGAGCTG
CGGGGCTCGGTTGATTATGGGCACTGCAGGAGGGTTTGGGATGGGGCTGC
TGTTCGGCATGTTCTTGGGTGCCATGGGGGACATGCAGCCCATACAGGTC
ATCAACGGGCGGGAGGTGCCGCAGGCGCCGCTCGGGGAACAGGCCAGAGC
CGCGTACCTGGGCACCAAATCGCGCAGCCTGGGCATGGCCAAGAACTTTG
CCAGCTTCTCCGCCATCTTCATGGCGAGCGAGTGCGTCATTGAGAAGATG
CGCGGCAAGCACGACATGATGAACAGCGTCTACGGCGGGTGCATCACAGG
CATGGCGTTTGGCATTAAGGCCGGGCCAAAAGAAGCCGTGGGCGGCTGCC
TAGGCATGGCAGCGTTCAGCGCCGTCATCGACGCCGTCATGGGCCATTGA