mRNA_13050 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|100891
Unique NamemRNA_13050
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 2.170e-137
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1 
Query:   61 MHSGGSQGSESPDRLGRWTVGGGLSPSTEQELGGRPLLLKFLPTVKAWDMRTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            MHSGGSQGSESPDRLGRWTVGGGLSPSTEQELGGRPLLLKFLPTVKAWDMRTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH
Sbjct:    1 MHSGGSQGSESPDRLGRWTVGGGLSPSTEQELGGRPLLLKFLPTVKAWDMRTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199
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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 1.100e-63
Identity = 114/175 (65.14%), Postives = 127/175 (72.57%), Query Frame = 1 
Query:  133 SPSTEQELGGRPLLLKFLPTVKAWDMRTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            S S   +LG R  L  FLP V          MP  PP L ESCG +LIMGT GG GMG +FG+FLGAMGDMQP+Q+INGREVPQAP  EQAR AY  T  RSL M +NFASFSAIFM SECVIEKMRGK DMMNSVY GC TG AFG+K GP+ A  GC+GMA FSA++D +MGH
Sbjct:   21 SRSLHPQLGSR--LPFFLPWVPRPAAGAADAMP-TPPVLTESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192
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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA)

HSP 1 Score: 147 bits (372), Expect = 7.100e-40
Identity = 82/165 (49.70%), Postives = 102/165 (61.82%), Query Frame = 1 
Query:  166 PLLLKFLPTVKAWDMRTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            P L+ ++PT            PP    + ESCG +  +G  GG  MGLL G+FLGAM DM P + VING+EVPQAPL EQAR     T  + +  ++NFA  + +F  SEC++EK RGKHD+ N V  GC+TG A   K GP+ A  GC G AAFS VIDAVMGH
Sbjct:   61 PYLIPWMPTFNG-----AQEPPPDFSFMTESCGIKSAIGLFGGAAMGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220
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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A6U3RYY1_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RYY1_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.060e-37
Identity = 82/164 (50.00%), Postives = 100/164 (60.98%), Query Frame = 1 
Query:  169 LLLKFLPTVKAWDMRTGGT-MPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMG 654
            L  K LP  + W   +G   +PP    L ESCG +  +G  GG  MGLL G+FLGAM DM P + VI G+EVPQAPL EQ R     T  +S+   + FA  + +F  SEC++EK RGK D+ NSV  GC+TG A   KAGP  A  GC G AAFS VID+VMG
Sbjct:  100 LTSKSLPYFQPWKPTSGPEQLPPDFTFLSESCGGKAAIGVFGGGVMGLLMGVFLGAMSDMTPPVTVIGGKEVPQAPLKEQMRTTMRATAEKSMYWCRQFAFITGVFSGSECLVEKYRGKTDVWNSVLSGCVTGAAMQAKAGPSSAAFGCGGFAAFSLVIDSVMG 263
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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A448Z601_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z601_9STRA)

HSP 1 Score: 139 bits (349), Expect = 7.340e-36
Identity = 80/165 (48.48%), Postives = 98/165 (59.39%), Query Frame = 1 
Query:  169 LLLKFLPTVKAWDMRTGGT-MPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            L  K LP    W    G T +PP    L + C  +  +G  GG  MGLL G+FLGA+ D QP IQV  G++VPQAP  EQAR     T  +S+   +NFA  + +F  SEC++EK RGKHDM N V  GCITG A    AGP+ A  GC G AAFS VID +MG+
Sbjct:  106 LTRKSLPYFMPWKTSGGPTEIPPNYAWLMDGCAGKAAIGVFGGGVMGLLMGVFLGALSDSQPPIQVAGGKDVPQAPFKEQARYTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAHAGPQAAAVGCGGFAAFSIVIDKIMGN 270
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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA)

HSP 1 Score: 136 bits (342), Expect = 9.130e-36
Identity = 70/136 (51.47%), Postives = 87/136 (63.97%), Query Frame = 1 
Query:  253 ESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            ESC  R ++G+  G  MGL+ G+FLGAMGD+ P I  + G+E PQ PL EQAR AY  T  RS+G A++F + +A+F  +ECVIEK RG+HD  N V  GC  G       GP  A  GC G AAFSA  +AVMGH
Sbjct:   56 ESCVGRAVLGSFAGGAMGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191
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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: B7FQ85_PHATC (Mitochondrial import inner membrane translocase subunit TIM22 (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ85_PHATC)

HSP 1 Score: 134 bits (337), Expect = 1.000e-35
Identity = 74/136 (54.41%), Postives = 88/136 (64.71%), Query Frame = 1 
Query:  247 LGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVM 651
            L  SCG +  +G  GG  MGLL G+FLGAM D  P +QVI GREVPQAPL EQ +     T  +SL   +NFA  + +F  SEC++EK RGKHD+ NSV  GCITG A   K+GP+ A  GC G AAFS VID  M
Sbjct:    1 LTNSCGGKAAIGVIGGGVMGLLMGVFLGAMSDATPPVQVIAGREVPQAPLREQIKVTMRATGDKSLYWCRNFAFITGVFGGSECLVEKYRGKHDVWNSVASGCITGAALQAKSGPQAAAVGCGGFAAFSLVIDTFM 136
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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: K0TBX0_THAOC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBX0_THAOC)

HSP 1 Score: 137 bits (346), Expect = 1.050e-35
Identity = 76/165 (46.06%), Postives = 99/165 (60.00%), Query Frame = 1 
Query:  169 LLLKFLPTVKAWDMRTGGT--MPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMG 654
            L ++ LP  + W         +PP    L ESCG++  +G  GG  MGL+ G+FLGA+ DM P + +I G+EVPQAPL EQ R     T  +SL   + FA  + +F  SEC++EK RGKHD+ NSV  GCITG A   K GP+ +  GC G A FS VID+ MG
Sbjct:   79 LTMRGLPYPQPWARANASPAELPPNFDWLSESCGSKAAIGVIGGGAMGLVMGVFLGALTDMTPPVTIIEGKEVPQAPLKEQMRTTLRATADKSLYWCRQFAFITGVFGGSECLVEKYRGKHDVWNSVVSGCITGAAMQAKQGPQASAAGCGGFAVFSLVIDSFMG 243
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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: W7TL11_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL11_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.430e-35
Identity = 71/140 (50.71%), Postives = 89/140 (63.57%), Query Frame = 1 
Query:  238 PPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMG 654
            PP   E+C  R + G   G G+G++ G+FLGAMGDM P I +INGRE PQAP GEQ R AY  T  R    A+NF + +A+F   +CV+EK RGKHD  N+V  GC  G A   K GP+ A  GC G AAFS +++ VMG
Sbjct:   66 PPNPQENCVGRSVFGAVAGAGLGVMMGIFLGAMGDMSPAIPIINGREAPQAPAGEQLRLAYRATFERCGHWARNFMALTALFSGVDCVVEKFRGKHDAYNAVISGCGVGAALSAKQGPQAACLGCAGFAAFSGIMEVVMG 205
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BLAST of jgi.p|Trimin1|100891 vs. uniprot
Match: A0A1Z5K7I7_FISSO (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7I7_FISSO)

HSP 1 Score: 135 bits (341), Expect = 8.890e-35
Identity = 79/162 (48.77%), Postives = 97/162 (59.88%), Query Frame = 1 
Query:  178 KFLPTVKAWDMRTGGTMPPQPPA-LGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQP-IQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 657
            + LP    W      T PP   + L  SC  ++ +G  GG GMG L G+FLGA+ D  P +QVI GR+VPQAPL EQ R     T  +S   A NFA  + +F  SEC++EK RGK+D+ NSV  GCITG A   KAGP+ A  GC G AAFS VID+ M H
Sbjct:  102 RSLPYPLPWKPVASPTEPPPDFSWLTGSCAGKVAIGVIGGAGMGALMGLFLGALSDTTPPVQVIGGRDVPQAPLREQMRVVMRATAEKSRYWAGNFAFITGVFAGSECLVEKYRGKNDLWNSVASGCITGAAMQAKAGPQSAALGCGGFAAFSLVIDSFMHH 263
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|100891 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C710_9STRA2.170e-137100.00Mitochondrial import inner membrane translocase su... [more]
A0A6H5KF19_9PHAE1.100e-6365.14Mitochondrial import inner membrane translocase su... [more]
A0A7S2P255_9STRA7.100e-4049.70Mitochondrial import inner membrane translocase su... [more]
A0A6U3RYY1_9STRA1.060e-3750.00Mitochondrial import inner membrane translocase su... [more]
A0A448Z601_9STRA7.340e-3648.48Mitochondrial import inner membrane translocase su... [more]
A0A7S1TYW7_9STRA9.130e-3651.47Mitochondrial import inner membrane translocase su... [more]
B7FQ85_PHATC1.000e-3554.41Mitochondrial import inner membrane translocase su... [more]
K0TBX0_THAOC1.050e-3546.06Mitochondrial import inner membrane translocase su... [more]
W7TL11_9STRA1.430e-3550.71Mitochondrial import inner membrane translocase su... [more]
A0A1Z5K7I7_FISSO8.890e-3548.77Mitochondrial import inner membrane translocase su... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_96contigContig_96:151630..158754 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|100891|CE100890_55
KEGG TC3.A.8.1
BRITEko00000,ko00001,ko01000,ko02000,ko03029
KEGG rclassRC00017
KEGG ReactionR02029
KEGG Pathwayko00564,ko01100,map00564,map01100
KEGG koko:K01094,ko:K17790
EC3.1.3.27
GOsGO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005886,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0017038,GO:0019866,GO:0022804,GO:0022857,GO:0022884,GO:0030943,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042721,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045039,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072655,GO:0072657,GO:0090150,GO:0090151,GO:0098796,GO:0098798,GO:0098800,GO:1904680,GO:1990542
Preferred nameTIMM22
DescriptionMitochondrial import inner membrane translocase subunit
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5596@1|root,KOG3225@2759|Eukaryota
Evalue1.43e-65
Seed ortholog2880.D7G569
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMitochondrial import inner membrane translocase subunit TIM22 homolog
Ec32 orthologEc-14_006420.1
TranscriptId101213
TrackFilteredModels1
ProteinId100891
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|100891gene_13050Tribonema minus UTEX_B_3156 geneContig_96 151630..158754 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|100891Trimin1|100891|CE100890_55Tribonema minus UTEX_B_3156 polypeptideContig_96 151847..158694 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13050_5exon_13050_5Tribonema minus UTEX_B_3156 exonContig_96 151630..151983 -
exon_13050_4exon_13050_4Tribonema minus UTEX_B_3156 exonContig_96 153764..153884 -
exon_13050_3exon_13050_3Tribonema minus UTEX_B_3156 exonContig_96 155632..155741 -
exon_13050_2exon_13050_2Tribonema minus UTEX_B_3156 exonContig_96 157322..157433 -
exon_13050_1exon_13050_1Tribonema minus UTEX_B_3156 exonContig_96 158575..158754 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_13050UTR3_13050Tribonema minus UTEX_B_3156 three_prime_UTRContig_96 151630..151846 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13050CDS_13050Tribonema minus UTEX_B_3156 CDSContig_96 158575..158694 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_13050UTR5_13050Tribonema minus UTEX_B_3156 five_prime_UTRContig_96 158695..158754 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13050 ID=mRNA_13050|Name=jgi.p|Trimin1|100891|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=877bp|location=Sequence derived from alignment at Contig_96:151630..158754- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AAGAAAGAGGAGCCGAGCCCGACAACGCCCCATACAGAGAGAGGCAGCAC
TCTGCTCAGAATGCACAGCGGAGGCTCACAAGGATCCGAGAGCCCAGACC
GGCTTGGACGGTGGACAGTGGGTGGTGGCCTCAGCCCATCAACGGAGCAA
GAGCTTGGAGGACGACCTTTGCTGCTTAAATTTCTACCAACCGTGAAAGC
ATGGGACATGCGCACGGGGGGGACGATGCCGCCGCAACCGCCAGCGCTGG
GAGAGAGCTGCGGGGCTCGGTTGATTATGGGCACTGCAGGAGGGTTTGGG
ATGGGGCTGCTGTTCGGCATGTTCTTGGGTGCCATGGGGGACATGCAGCC
CATACAGGTCATCAACGGGCGGGAGGTGCCGCAGGCGCCGCTCGGGGAAC
AGGCCAGAGCCGCGTACCTGGGCACCAAATCGCGCAGCCTGGGCATGGCC
AAGAACTTTGCCAGCTTCTCCGCCATCTTCATGGCGAGCGAGTGCGTCAT
TGAGAAGATGCGCGGCAAGCACGACATGATGAACAGCGTCTACGGCGGGT
GCATCACAGGCATGGCGTTTGGCATTAAGGCCGGGCCAAAAGAAGCCGTG
GGCGGCTGCCTAGGCATGGCAGCGTTCAGCGCCGTCATCGACGCCGTCAT
GGGCCATTGAACACAAAAAGCTGTTGCATTTTACGGAACCGAATCAAAAG
ACCGTGGAGCTCTAGGCGACGAGGCGTGGTCAGCCGCGCAAGTGCGTTCC
ACAAGTGAGCGTGGCCGCCGCTGCTGCAGCCACGTTCGCCAGCGGCGGCG
GCGCGTGTGCACGGTGCGCCTGTACAGATCCTGTTGAACCTGTAAATGAA
CTTCCGCTGATGCGCGGCGCCTTTTCT
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protein sequence of jgi.p|Trimin1|100891

>Trimin1|100891|CE100890_55 ID=Trimin1|100891|CE100890_55|Name=jgi.p|Trimin1|100891|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=200bp
MHSGGSQGSESPDRLGRWTVGGGLSPSTEQELGGRPLLLKFLPTVKAWDM
RTGGTMPPQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQV
INGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKM
RGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH*
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mRNA from alignment at Contig_96:151630..158754-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13050 ID=mRNA_13050|Name=jgi.p|Trimin1|100891|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7125bp|location=Sequence derived from alignment at Contig_96:151630..158754- (Tribonema minus UTEX_B_3156 )
AAGAAAGAGGAGCCGAGCCCGACAACGCCCCATACAGAGAGAGGCAGCAC
TCTGCTCAGAATGCACAGCGGAGGCTCACAAGGATCCGAGAGCCCAGACC
GGCTTGGACGGTGGACAGTGGGTGGTGGCCTCAGCCCATCAACGGAGCAA
GAGCTTGGAGGACGACCTTTGCTGCTTAAAGTACGTCGCGCTGAACATGC
TGCGCCCGCTGAAGGACATGTGTGCCCGGATTCGACACACGTGTGCATTC
GTCGTAGCCAGACCGCAGCGCGTTTTGTTGGGAGCACTTGGTGTGCCTTT
CGATTCCTATTTCGAGCGAGGACAGGGCAGAGTCACAAAGCACAATAACA
GTCTCCGGCAGTAGGCGTTATTATCAGCGAGATTGGCTCTGCGCTGTGCT
TAACGCTAATGTAACGAGAGATTGGCTCTGCGCTGTGCTTAACGCTAATG
TAACGAGGAAGCGGCACACACATAGATGGCTTGGCTCAACGAAGAGGTGC
GAGGCAAGAAATGCTCAGGAGCATGCTTTACAGGCTTTTTTGCGAGCTGG
CGATCTGAGAACGGCATGCGCCTGAGATGTGCCGCCTGACGGGTCTGTTG
CGAAATATCTGGCACATCTACGTAGTTCGTGTCGAAGGATTGCTCGTATG
TAAAGGCGTCGTCAGGGCAGCAGCGCTAGGATGCCCTGGCAGCAGAGATC
GCCAACAGTTGAAGCGAGGCGTGTGTGCTCTCAGGGCTAGGGTTGGCGTC
CCTGTTCTATGAGCGAATGCTGCGCATACTGTATGTATGGTGTTAGCTCA
TGCCAGGGTCATACTCGCACCATGAAGGCACTTGCGGCTAACCACTCCTT
GTCACCTAAGTAGAGCTCTACGATCTTCTGATTCGTTTCCATATGGTACT
GTACTGCATGCGAATCCTCGGACTTAGCTAGTGCACGCCACAGGCACTTT
TTGCCACCTGTGACAGTTCGGTCCGCTTCGCCTAGCTTCGGACACAAGTT
CATGGCTGCCGTGTAACCCTGGCATACGTGTGATGCCAGGCTTGCCCTGC
CGCTCTTACATCACCACAGCGCTGTTCAGCGCTGCAGCAGGCGAAGCGCA
GTCAGCGCGGATTCCACAGTCGCCTGTGCGGCGTCACACGACGCTCGTGT
CTCTCGGCTACATACACACCCCTCCTCATCTCACCGCGCTCAGGAGTCGC
TGCCAGCATCCCGAGCCCTGCTGCGTTGCATGCTTGTACTGTAGGTATGT
GCATGCACATTGCCGCCCCCCACGCTTATGTATGCTCAGGCTGCCCCCCC
CCCCCCCCGTGCACTCCACAGTTTCTACCAACCGTGAAAGCATGGGACAT
GCGCACGGGGGGGACGATGCCGCCGCAACCGCCAGCGCTGGGAGAGAGCT
GCGGGGCTCGGTTGATTATGGGCACTGCAGGAGGTGAGCTCGTTCGCCCC
CCCGTGCTGACGTGACGCTTTGCCCTAACCCTACTCCTAATGGTGATCCT
AACCTTCTTGCTCGCCCCCACTTGCTGGTGCCTGACGCTCTGCCCTAACC
CTACCCCTAACCCTGATGGTAACCTGTCTTGCTCGCCCCCCCTTGCTGGT
GCATGACGCTCTGCCCTAACCTCACCTGTACCTCTAATCGCAATCCTGTT
TGCTGAGGTAAAGCCTGTGGAGTGGCAGTTTCCGCTCGCGCGAAGATGAA
GGCAGTGCATAGCGCGGTGTGTTGATGGGTTGAAGCTGCTGCTATAGCCG
GCAAGGGCGGTTGAGGAGCGGCACTGCGGCACCTGCGGCAGACGCATGTT
TCATGCACGAGTTCTTGTTGGAATTGCCAATGCTGCGCAGTCCATTCAGC
TCCATGCATAGCTTGTCACTTCACATCACAGTGGTCCACACCGTGCGCGT
GACGTGACGTCTTGCGGCACCATCATTTGCACACTCCTCTGTACGATACT
TCAAGTGGAAGTGTTGGAACTGCAGCTGGTGCTGGGATAGCCCATGCTGC
GTAGCCCATTCAGGGTTATCACGTGCCGCTCCCGTACACGGCGCAGCAAC
AATGACAGCGGACGTTGGCGTTGCTCGCGATGTCAATTGTGCGACACACG
TTGCTTGGCATATCAGTTATATGACATCACATCTCGGGGGTCCACATCGC
TTCACATCACAGCGATACATACCGTATGCGTAAGGCCAGGTCCGGCGGCA
CCATCACTTGCGCACACGCCTGTGAGGTACTTCAAGTACTTGCGCGTTAC
GCCCGATGGCGACGCTGCTTGCGGGCGCGGTGTGGTGCACGCATGCCGCC
GGCGCGCCGCAATGCGCAAGGAGCATTATTTGCGAGGTCTGCCCGCGAGA
CGCGTGAGATGAGTGCTGCTGTAACGCGAAAGCCGGCGGACGCGCAGCAG
CGATCAGGAAGCAGCAAGCACCTAACCCTAACCCCATCCTAAACCTAATC
TCATCCCTAAGTTGGCACAGTGCTCAGCTGATGACACCACAGTAGCCCAC
CCCCCGCCGCCGGCATTCTTGACGCTGTTGGCATGTTGCTCATGCGATGA
ACCTACGGCTGCCCAACCTTCACCGCCAGCATTGTTGACGCTGCTTGCGT
GGCTCTTAGCGGACGGCGCTACAGCAGCTCACCCTCCGCTGCTGCCGGCA
TTCCTGTGTGATTTTCGCGGCAGCGCTGTTCGAACCCTAACCTTAACCCT
AACCCATCGCTCACCCGATGACACCACAGCGCCGTCTTTCCGCCGCCGCT
TGCATTCCTGCGTCGTCTGCAGCAGCGCTGTTCCCACAAGTTTGCAACAT
CAAAAGGAATAAAAAAATAATTATTGATTACCCCCACCACTGCAGAACGA
GTGACTAAATTGCTCAGTGGATGACACTGCGGTGCCCACCCTCCCCTCCG
CCGCTGCCGGCACTCCTGCGTTTCTTGCAGCAGCGCTCTTCGCATAGTGG
CAATGATGTTGCTCAGCTGAAGACACTAAAGTAGCTCGCCCTCGCTCCTG
CGTTCTGTTGCAGGGTTTGGGATGGGGCTGCTGTTCGGCATGTTCTTGGG
TGCCATGGGGGACATGCAGCCCATACAGGTCATCAACGGGCGGGAGGTGC
CGCAGGCGCCGCTCGGGGAACAGGTGTGCGCCGCGTGCCATGCTTCACAG
GCTTCTACGATGCCAAACTTCAATCGCACAGGCTACTTCAACTGTCCAGC
TGCGCGCTGCCTGCCGCCCCTGACTGTGCTTTAAATACTCCCCCCCCCCC
ATATGTCTTGAAACATCCTCGGGAGCTCAGAGCCAGTTTATGCACATCAG
TTATTGAGCAATTGCGTCCGTATCGATACAAGCAGGTCACATCTCAAGCT
TGCCGATACTACCCTCAAAATCGCAACCTGCTTAAGTTCTTCTACTCGTA
TAGTGCCATACTGCAACCGTGCGTGCGTGCTGCCACCTCTGCACATTCTA
CACGGGGGCTTCGGAACGTGTTTTCCGCCCTGTTCACGTCTCCGAAGGCT
GGTGCTGTGGTGTCGCAGCTTGCGTGTGCAACACAACACAGAGCAGTAGA
AATGGCTCAAAGGCATCACTCCCTGCACAGAGCGTTGCGAACAGCAGGCA
TCGCTCAGCATGTGCTGCGGTCCAACATCAGCTGCGTGAGCGGGGCAGGG
CCTGTCCCACTGAGCACTGCTGCATCATTTAGTTGCTGAGCGCTGCCTGT
CAACTGCCGCTGTCGCTGTTGCCGTCGTCGCGGCTGCCGGTAACAGGGCA
CTGCGCCCGCCTGTGCCTCTTGCGACCGCACCTGTCGCACCCGCCAACGA
AGGGATGCGTGTTTCGGCAGCGCAACGAGACATAAATGCAGTTTTTTTGA
CCCAAACGAAGGGATGCGTTTTTCGGCAGCGCAACGAGACATAAATGCAG
TTTTTTTGACCCAAGAATATGGCCACCGGTTTTGGGAGGGTCTCCCGCAG
GAATGAGGTGCTAGGTGCATCCTCATACCTTCTGCGGCCAAGCACGGCAA
TGTTAGGCATACAGCTTTGACATAGACACAACATTATTATTGTGACGTGA
TCCTCGTGTGGCACATGGCTGAAGCTTTTGACGCACGTCGTTGCGCTGCT
CGCCGTAGGCGTTTCGGCGAATCGTAGGATCCCTACGACACGCTCGCACA
TGCAGGGCATGCAAACGCTCACACTTATGGGGCAAATGCAGTTGTTAGCA
TTTTAAAGTCCTGTTCTGTATGTATGTATGTAGCGTAGGACTCTCATGAC
GCGCTTCGCACGTGCAGTGGCGTGCACAAGCTCACACTCGCAGGGTGATC
AAAATTCGATCGGTACTGTAGAGTCCTGTGCAGTATGTATGCATAGCGCT
GCATGACCGTGCTGCGTCGTCATGAGATGTAGGTAATCGTCCACGCCGCA
AGGGCGCGTTAGAAGCGAAGACTTCACGAGGACACGCATTGATGTCACCT
CATGCGGAAACTTCACACCAAGTCTCATCTTGTCACCGCTACAATGTGCA
CACCATCCGTGTGCAATTATGCTGACAAGCTCCCTTTTGCTGGGGCTCAC
TGATGCTGCATGACACTAACCCTAACCTAACCCTCATCCTGACACCCCCT
TCCGGTCTGTGCGTCGCGATAACCCTCATCCCAACCTTAAACCCTAACCC
AGGCCAGAGCCCCTACAAAGGACACGCATCGACATGACTCAACGCTGACA
CCCTGCAGCGAATCTCACTTTGCCACCGCCACAGTGTGTGCACCATTTGT
GTATGATTTTGCGGACATGCTTACTTACGCTGAGGCTGACTGCCCTTGCC
CGACACCCGCTTCTGGTTTCCATGGTTGCGATGACCCCAACCCTAACCCC
AAACCCTAACCCTAATTCAGGCCAGAGCCGCGTACCTGGGCACCAAATCG
CGCAGCCTGGGCATGGCCAAGAACTTTGCCAGCTTCTCCGCCATCTTCAT
GGCGAGCGAGTGCGTCATTGAGAAGATGCGCGGCAAGCACGGTGAGGCTG
CGAATTAGGTTTAGGTATAGGGTTAGGGTTAGGGTTGAATGCGCAGCAAG
CACGGCAAGGCCTGAATCAGCGTCAAGTTTATGTTTAGAGGTAGGGTTAG
GCTTAGGGTGGAGGCCAGCTAACCCTAATCCTATGTCATGTGGAGAACAT
GAATGCGCACGGCAGGCACGGTGAGGCTCAGGGCTTGCTATGCGTAAAAG
CCAGGGTTAGGGTGAAGGCTAGTGACTCAGTGAGTGAGTGAGGGAGTGAG
TCATGGAGCATTGCACGGCAAACATGGCGAGGTGTAGTGGCAGGGTTTGA
CATGGTCGTCGTTGACTACTGATGCGCAGGAACTAGAGCACGGTTACCGT
CAGCTTCTGTCAATACCTCAAGTACGCTGTGCGTCACCCCACTTTGCATA
CGCACGCCGCTGCTGCTCGCGCGCTTCGCCCGTCCTCGCTGCGCCGGGCA
TGCATTACTAGGGGTATGTACGTATGTCAAACACGCCCCCTCGCAAGTCC
GCTGCGCAGCGCGCCTGCACCGCTGGTGGTAGTCACTTGCGCGCTGCACG
TCAAAATGACACCTTTTATCACTGGTTGCGGTGGAAGTTGAAGCGGCGTC
GGCACCAGTGCTGCGATAGCACCGACGAACGCGGACTTGGCATTACTGCA
ACAGGCTCGCGTCTGGCAACAGATACTTCACGAAGCAGCTGACTCCGGAG
TGCTTGCCGACCAGCGCTGCGATCGCAATGGTGAACGCAAACTTCGGAAT
TGCGAAATACTCTCTGCTGGCACCAGATGCTTTATGAAGCAGTCGACGCG
TAGGGTCAGTGTTAGGGCCAGGGTGAGCTTGCCGATCACATGCTACTTGA
AGTATATCGCCCACGGGGGTCGGGGCTTCTGGTGCTGCGCCTGCTCGCGT
CTTGCGGCGTTCATATTTGAAGTCGATGCTGCATCGCAAACTCCACGCGC
TCAATCTAACCCTAACCCTAACCCTAACCCTGATGATTTTTATTCCACGT
ACAAGTTTAACTCGTCCGCCACGTGTTGAAACCTGTAGAATGTTCTTGCA
AAGTGAAACCTCCACCTAAGTTGTAAACTCGTCCGCCACGTGTTGCAACC
TGTAAAATGTTCTTGCAAAGTGAAACCTCCACCTATGTTGTGCACACACA
CACACACACACACACATACACATATACTTGACTGCAGACTGTCGCGCACT
ATGCGGCGCACAGGGGCGAGGGGCGGACGCGATCTCACATGCACCGTTTT
CGGGCCAGCTCATGACTGGGTTTGCCACTGGTCATCGCGACCGCTCATGC
GCGCGCACTGTGCGCTCTTCCCTCCGCTGCATTGAACTTGACAACGTGAC
ATGAGGTCGATGGTGAAGATGAAGTTGAACTTGTCTACATTTTTGGGCCA
GCTCATGGCGCGGCGTCGCCATTGGTCATCCCAACCGTTCATGCGCAAGC
ATCGTGCGCTCTTCCCTCCGCATTGAACTTGACTCAGAACTAACGTGGCG
TGAGGTCGGTGTTGAAGATGAAATTGAACACTGGCCATCACGACCGCTCA
TGCGCGAGCATCGGGCACCCTTCCCTCCGCTTTGAACTTGACTACGCACA
ACGTGGCGTGAGGTCGGCGTTGAAGATGAAATTGAACGCTGGTCACCACG
ACCATTCATGCGTGATCATCATGCGTTCTTCCCTCTGCCACACATTGAAC
TCGACTACGCACCAACATGACGTGATATAGATGTTGAAGTTAAAAGTTGA
ACTTATCTACTGCTCTCGCAGACATGATGAACAGCGTCTACGGCGGGTGC
ATCACAGGCATGGCGTTTGGCATTAAGGCCGGGCCAAAAGAAGCCGTGGG
CGGCTGCCTAGGCATGGCAGCGTTCAGCGCCGTCATCGACGCCGTCATGG
GCCATTGAACACAAAAAGCTGTTGCATTTTACGGAACCGAATCAAAAGAC
CGTGGAGCTCTAGGCGACGAGGCGTGGTCAGCCGCGCAAGTGCGTTCCAC
AAGTGAGCGTGGCCGCCGCTGCTGCAGCCACGTTCGCCAGCGGCGGCGGC
GCGTGTGCACGGTGCGCCTGTACAGATCCTGTTGAACCTGTAAATGAACT
TCCGCTGATGCGCGGCGCCTTTTCT
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Coding sequence (CDS) from alignment at Contig_96:151630..158754-

>mRNA_13050 ID=mRNA_13050|Name=jgi.p|Trimin1|100891|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=600bp|location=Sequence derived from alignment at Contig_96:151630..158754- (Tribonema minus UTEX_B_3156 )
ATGCACAGCGGAGGCTCACAAGGATCCGAGAGCCCAGACCGGCTTGGACG
GTGGACAGTGGGTGGTGGCCTCAGCCCATCAACGGAGCAAGAGCTTGGAG
GACGACCTTTGCTGCTTAAATTTCTACCAACCGTGAAAGCATGGGACATG
CGCACGGGGGGGACGATGCCGCCGCAACCGCCAGCGCTGGGAGAGAGCTG
CGGGGCTCGGTTGATTATGGGCACTGCAGGAGGGTTTGGGATGGGGCTGC
TGTTCGGCATGTTCTTGGGTGCCATGGGGGACATGCAGCCCATACAGGTC
ATCAACGGGCGGGAGGTGCCGCAGGCGCCGCTCGGGGAACAGGCCAGAGC
CGCGTACCTGGGCACCAAATCGCGCAGCCTGGGCATGGCCAAGAACTTTG
CCAGCTTCTCCGCCATCTTCATGGCGAGCGAGTGCGTCATTGAGAAGATG
CGCGGCAAGCACGACATGATGAACAGCGTCTACGGCGGGTGCATCACAGG
CATGGCGTTTGGCATTAAGGCCGGGCCAAAAGAAGCCGTGGGCGGCTGCC
TAGGCATGGCAGCGTTCAGCGCCGTCATCGACGCCGTCATGGGCCATTGA
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