mRNA_13028 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|173978
Unique NamemRNA_13028
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Match: A0A835ZFE1_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFE1_9STRA)

HSP 1 Score: 588 bits (1517), Expect = 2.980e-209
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 1
Query:    1 MTGAAVIASPSPTSSAAAVSTHAPVALRLAWSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSPTSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPSAALVFVATTAGVVASLTEGGELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCVANHTVHAGSEVVAFGDHSGCITCVRVACGTVIWHQSVDRNRATTAYASPFACSCKGLTVFCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYKVAVGRD 1173
            MTGAAVIASPSPTSSAAAVSTHAPVALRLAWSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSPTSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPSAALVFVATTAGVVASLTEGGELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCVANHTVHAGSEVVAFGDHSGCITCVRVACGTVIWHQSVDRNRATTAYASPFACSCKGLTVFCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYKVAVGRD
Sbjct:    1 MTGAAVIASPSPTSSAAAVSTHAPVALRLAWSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSPTSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPSAALVFVATTAGVVASLTEGGELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCVANHTVHAGSEVVAFGDHSGCITCVRVACGTVIWHQSVDRNRATTAYASPFACSCKGLTVFCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYKVAVGRD 391          
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Match: UPI000719E9C2 (acyl-CoA synthetase family member 4-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E9C2)

HSP 1 Score: 93.2 bits (230), Expect = 1.010e-16
Identity = 115/378 (30.42%), Postives = 172/378 (45.50%), Query Frame = 1
Query:   91 WSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGA---LVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSPTSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPSAALVFVATTAGVVASL-TEGGELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCV-------ANHTVHAGSEVVAFGDHSGCITCVRVACGTVIWHQSVDRNRATTAYASPFACSCKGLT----------VFCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYKVA 1161
            W    GKCVDA+PLV  D    G  C C    +G    +V +GSHSG++ A +L +GE +W  H   R+ESS   SA                XXXXXXXXXXXXXXX                    XXXXXXXXXXXX                    +  P    V+ AT AG++ +L ++ G L W +    P+F+ P +   G            +     SG  +W  K +  +FSS C            +   +++VAFG H   + C+  + G + W   +D       Y+SPF  S   +           +  VA++ G L +L+  +G +++  L P +VFSSPV +G+ +++GCR++ + C +++
Sbjct:  853 WKYDTGKCVDASPLVAVDGY--GNFCPCEDCLSGHSQHVVFLGSHSGRMAAIALSSGEMLWDIHLPDRIESSACLSACGNFVIVGCYDYCVYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQCTWRKHLKGGSLFSSPCASRNPHT--VYAATLAGLLTALHSDTGRLIWTYRCGKPLFSSPQLVEGGVCIGCVDGVIYCIS---QSGNLMWNFKTDGYVFSSICTFPLITTSETAILQKPNQIVAFGCHDNHVYCLSSSNGKLNWKVCLDSE----VYSSPFIASAHVIANAKESVSVNAIVFVASTRGTLYMLDAETGNILTHYLLPYKVFSSPVALGNAVVVGCRDNFVYCMELS 1219          
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Match: A0A5A9NKA6_9TELE (Acyl-CoA synthetase family member 4 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9NKA6_9TELE)

HSP 1 Score: 87.4 bits (215), Expect = 7.890e-15
Identity = 133/386 (34.46%), Postives = 189/386 (48.96%), Query Frame = 1
Query:   70 PVALRLAWSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSPTSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPSAALVFVATTAGVVASLTEG-GELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCVANHTVHAGSEV----------------VAFGDHSGCITCVRVACGTVIWHQSVDRNRATTAYASPFACSCKGL-----TVFCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYKVA 1161
            P+ L++AWS   G+CVDA+P++L  P                 V IGSHS +++A +L +GE +W +  G R+ESS AA        XXXXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXXXXXXXXXXXX               H+ S   ++  T  G +  L    G + W H++  P F+ P  ++S             +G++  SG QLW       +FSSPCV++ T    S+V                V  G H G I C+    G+++W      N  TT           G+     T+  V+++ G + +L+  +G + +    PG++FSSPV+ G  L++GCRND++ C ++ 
Sbjct:  813 PLGLKVAWSSDTGRCVDASPVLLVAPERT-------------TVFIGSHSHRLQALNLRSGEVIWERILGDRLESS-AAITKCGTLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHYCGGGAVFSSPCLHL-SPRQLYCCTLGGDLHCLNPDIGAVLWTHSSGVPFFSSPYCSDS--CVFIGAVNGHIVGIS-HSGNQLWDFSTEGPVFSSPCVSSLTSLTNSQVSKTPGNTSPSSSPNFVVTCGSHDGHIYCLNAYNGSLLW------NFQTTGKVFSIPFMFDGVLWGFGTLVAVSSTDGTVWILDGETGTLKAALSLPGELFSSPVVWGQTLVVGCRNDYVYCLELG 1174          
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Match: A0A2R2MQU1_LINUN (acyl-CoA synthetase family member 4 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MQU1_LINUN)

HSP 1 Score: 85.1 bits (209), Expect = 4.860e-14
Identity = 124/390 (31.79%), Postives = 171/390 (43.85%), Query Frame = 1
Query:   91 WSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSPTSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPSAALVFVATTAGVVASLT-EGGELRWRH---NAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCVANHTVHAGSEVVAFGDHSGCITCVRVACGTVIWHQSVDRNRATTAYASPFACS-----------------------CKGLTVF-------CVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYKV 1158
            W    GKCVDA+PL++      G             V IGSHS +V A  L TG   W +  G R+ESSP  S+      XXXXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXXXXXX                    +  P +  V+ AT AG V  L+ + G++ W     +   P F+ PA+   G            +     +G  LW    +  IFSSPC+ + +    +E++ FG H   + C+     T+ W         +T +  P   +                       CK +  F       C+  + G L +L    G   S+   PG+VFSSPV+ GD++L+GCR+D++ C ++
Sbjct: 1260 WKYDTGKCVDASPLLVLRDRGQGQ------------VFIGSHSHRVSAIDLHTGNVHWDRELGDRIESSPCLSSCGNYVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQCAWKRDLGGGSVFSSPVVS--PDSCNVYAATLAGTVVKLSADMGKVNWMFYDKSDTKPFFSSPALTQEGVCIGCVNGKLYHIDY---NGKMLWSYSTSGPIFSSPCI-HQSDDRKTELIIFGSHDHYVYCLPSDAPTLRWKMKTSSQVYSTPFVFPVLKTEIVPKLIDNSNEIPNTSEKPGNICKNVKNFETYENFVCICATNGSLYLLALEDGTCFSQYNLPGEVFSSPVVFGDKILVGCRDDYIYCLQM 1631          
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Match: UPI001ED8B69A (beta-alanine-activating enzyme n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8B69A)

HSP 1 Score: 84.0 bits (206), Expect = 1.020e-13
Identity = 90/391 (23.02%), Postives = 154/391 (39.39%), Query Frame = 1
Query:   91 WSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSP------TSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAH---------------VPSAALVFVATTAGVVASLTE-GGELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCVANHTVHAGSE-VVAFGDHSGCITCVRVACGTVIWHQSVDRNRATTAYASPF----ACSCKGLTV-------FCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYKVA 1161
            W   L KCVDA+P+VL     A ++C+         VV+GSHSG V A +L+ GEE++      R+ESS  ++                                +++K SP      T   F + +  +                                 +                  S  +V  A+ +G+ A LTE  G + W+++  AP+FA P V   G            +  +   G ++W  +    +FSS      TV  GSE ++ FG H   + C+  + G  +W + V      T +  P     A + +G  V         V ++ G L +L+  +G +++     G++FSSP ++ +Q++ GCRN+ L C+ ++
Sbjct:  642 WKYDLLKCVDASPVVLQ---YADSKCI---------VVVGSHSGIVAAVNLENGEEIFRCVLPDRIESSVCSTPCGKFLFVGCYDHNLYCIGMPEGKVLWSFGAEEMVKSSPLIVNAGTCVAFGSYSGSMYCINFKGHLIWKVKLHSGSIYSSPTLYQGSPDLSEGDENRKYSLEDSSSSTTSQGIVLCASLSGMCAGLTERDGRILWKNSLDAPIFASPLVY--GHYAVFSSVKGMVICFSAKFGEKVWSFQAGGNVFSSFT----TVVVGSERLIVFGCHDHYVYCLS-SDGVPVWKKEVHSPVFATPFEFPVKFQVASNEEGGAVADVMTQLLAVCSTAGHLYILDCRNGTMIADVKVHGEIFSSPAVLCNQIVFGCRNNFLYCFTIS 1013          
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Match: T1IUS3_STRMM (AMP-binding_C domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IUS3_STRMM)

HSP 1 Score: 82.8 bits (203), Expect = 1.900e-13
Identity = 129/366 (35.25%), Postives = 176/366 (48.09%), Query Frame = 1
Query:   76 ALRLAWSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSPTSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPSAALVFVATTAGVVASLT-EGGELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSS--GVQLWQLKLNSAIFSSPCVANHTVHAGSEVVAFGDHSGCITCVRVACGTVIWHQSVDRNRATTAYASPFA---CSC-KGLTVFCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCY 1152
            AL+L W   L KCVDA+ L++     +  +           V IGSHS +  A  ++TGE VW    G R+ESS   S         XXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXXXXXXXXXXX               +  P    +++ T  G + SL    G + W  N   P+FA P V N                L C S  G Q+W      +IFSSP V    +H   + + FG H   + CV V  G V W   ++    +  YASPF+   CS  +   V  +A   G + ++  ++G+ ++     G++FSSPV++ D+L+IGCR++ + C+
Sbjct:  281 ALKLGWRFDLRKCVDASALMVGSTDNSKVR-----------VFIGSHSNEFAAIDVETGEAVWVVRLGGRIESSACVSLCGTLVIVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKISPTHGSIFASPSVSKQPHC--IYIGTLDGKLCSLNPSNGLVFWEKNLQKPIFASPVVTNDKVFAANVNGD-----LYCFSHIGKQIWLFSTIGSIFSSPIV----IH--KKFLMFGCHDSKLYCVLVETGHVHWILQMN----SPIYASPFSLFNCSKERSGHVGVIACITGEIKLVSVINGSEIASYTLSGEIFSSPVILKDKLVIGCRDNFVYCF 618          
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Match: A0A1B6HCM2_9HEMI (Uncharacterized protein n=2 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6HCM2_9HEMI)

HSP 1 Score: 78.6 bits (192), Expect = 2.430e-13
Identity = 58/200 (29.00%), Postives = 96/200 (48.00%), Query Frame = 1
Query:  565 HVPSAALVFVATTAGVVASLT-EGGELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCVANHTVHAGSEVVAFGDHSGCITCVRVACGTV--IWHQSVDRNRATTAYASPFACSCKGLTVFCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYK 1155
            H+P+  LV V +  G V +L    GE++W     +PVF+ P V  +G              L   SGV++W++ +   IFSS  V  +       +V FG H   + C+R +   V  +W Q    +  +  YA+P      G      AT+ G++ +    SG +++    P ++FSSPV+  D L+IGCR++ + C +
Sbjct:   11 HLPTLGLVVVVSLGGQVVALNCATGEVKWHATLLSPVFSSPCVV-AGVVVIAEVEGTLHAFLP-ESGVEVWKISVGGKIFSSLSVTGN-------LVLFGCHDNNLYCLRCSEQAVELLWRQ----DAGSAVYATPVRL---GPHFLAFATTAGLVYIACLHSGKIITSICLPKEIFSSPVIYRDSLIIGCRDNSVYCLR 194          
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Match: A0A218VEY3_9PASE (Acyl-CoA synthetase family member 4 n=1 Tax=Lonchura striata domestica TaxID=299123 RepID=A0A218VEY3_9PASE)

HSP 1 Score: 80.9 bits (198), Expect = 1.000e-12
Identity = 107/372 (28.76%), Postives = 155/372 (41.67%), Query Frame = 1
Query:   58 STHAPVALRLAWSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSPTSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPSAALVFVATTAGVVASLTEGGELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCVANHTVHAGSEVVAFGDHSGCITCVRVACGTVIWHQSVDRNRATTAYASPFACSCKGLT---VFCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYKVAV 1164
            S+ A +ALR+ W     KCVDA+PL++                  A V +GSHS  ++A  LD GE  W +  G R+ESS   S                                 +++                XXXXXXXXXXXXXXXXXXXXXXX          H      V+ + T  V       G   W+ N   P+F+ P   N G                    V++WQ   N  +FSSPC+++ T     + + FG H   I C  +  G ++W         ++ Y +PF      L    +    ++ G + +L+  SG        PG+VFSSPV+ G +L++GCRND++ C  + +
Sbjct:  619 SSVAELALRVRWKSNTKKCVDASPLIIIPTKEE----------VSASVYVGSHSHAMQAIDLDLGEIKWEKTLGDRIESSACVSKCGNFIVVGCYDGLVY-----------------VLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALDIYVRALTHFYMKRCVYGSYTVKVT------GSKIWKSNLGKPLFSSPHC-NEGYVCVGCVDGNLYCYTHYGEKVKVWQFSTNGPVFSSPCLSSLT----KQEIFFGSHDCFIYCCNME-GNLLW----KFEATSSVYGTPFIFQSDDLNNKILLAAVSTDGKVWILDAKSGTAEGVDKLPGEVFSSPVVWGTKLVVGCRNDYVYCLDLYI 947          
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Match: UPI0018860612 (beta-alanine-activating enzyme isoform X1 n=2 Tax=Syngnathus acus TaxID=161584 RepID=UPI0018860612)

HSP 1 Score: 79.3 bits (194), Expect = 3.250e-12
Identity = 113/359 (31.48%), Postives = 163/359 (45.40%), Query Frame = 1
Query:   91 WSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSPTSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPSAALVFVATTAGVVASL-TEGGELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCVANHTVHAGSEVVAFGDHSGCITCVRVACGTVIWHQSVDRNRATTAYASPFACSCKGLTVFCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYKVAV 1164
            WS   G+CVDA+P++L      G             V IGSHS +++A  LD+G  +W +  G R+E+S A S       XXXXXXXXXXXXXXXXXXXXXXXXX                    XXXXXXXXX                           +   ++VAT  G +  L  + G++ W HN   P F+ P    +G            L  +  +G  +WQ + ++A+FSSPCV +       + +  G H  C+ C+  A                      F    +G  V  VA++ G + +L+   G  +     PG++FSSPV+ G  L++GCRND++ C ++ +
Sbjct:  682 WSSDTGRCVDASPVLLVREDGNGTS-----------VFIGSHSHRLQALDLDSGRLLWERVLGGRIEASAAVSPCGRYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQAQRCIWRHHCEGGAVFSSPYLD--VTRRQLYVATLGGKLLCLHPDNGDVLWSHNRKVPFFSSPKCGGAGGRVAIGSVDGNILCFS-YNGTLIWQFRTDAAVFSSPCVTSDL-----KRLLCGSHDSCLYCLNTA--DXXXXXXXXXXXXXXXXXXXFDGGKRGELVG-VASTDGTVYILDARDGRALCSRTLPGELFSSPVVRGRSLVVGCRNDYVYCLQINI 1018          
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Match: E0W429_PEDHC (AMP dependent ligase, putative n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0W429_PEDHC)

HSP 1 Score: 77.4 bits (189), Expect = 1.360e-11
Identity = 77/361 (21.33%), Postives = 137/361 (37.95%), Query Frame = 1
Query:   79 LRLAWSLPLGKCVDATPLVLADPAVAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIIKCSPTSATFAANTPVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHVPSAALVF-VATTAGVVASLTE-GGELRWRHNAPAPVFADPAVANSGXXXXXXXXXXXXLGLACSSGVQLWQLKLNSAIFSSPCVANHTVHAGSEVVAFGDHSGCITCVRVACGT-VIWHQSVDRNRATTAYASPFACSCKGLTVFCVATSCGMLAVLEQVSGAVVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCY 1152
            LR+ W   LGKC+DATP V       G +           V++GSHS ++    + +G+ +W +  G R+ES  A +                                D+IK +P      +   VL                                   +      F +AT  G   SL++   E+ W+    +P+FA P + N                     G  LW       I+S+P           + + FG +   + C+RV     ++W + +D    ++ ++   A     +   CVA++ G++ +L  +SG V +R    G+VFSSP+ + ++ ++GCR+++L  +
Sbjct:  636 LRIKWKHDLGKCIDATPTVFN---YLGEE----------RVIVGSHSFKISCLLITSGDVLWTKTLGGRIESGVAITKDGTLGFVGCYDNFVYCISMIDGSTKWQFKTDDMIKSTPC---LDSKEKVLFVASYDRHLHILDVESGVLQKKIKLSEKGIFSSGCISKVYNTFHIATLDGTCVSLSQITFEIDWKIKLKSPIFASPCLINDDKEIIFTEVFGTLHCFDIFKGTNLWNYTAGGYIYSTP---TFYFLKDMKSIVFGCNDSNVYCLRVDKEIDLLWKRKLD----SSIFSRSSAFHLGEVNAACVASTKGIVYILNLLSGNVFTRIKLNGEVFSSPIFINNEFVVGCRDNYLYTF 973          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173978 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFE1_9STRA2.980e-209100.00Quinon protein alcohol dehydrogenase-like superfam... [more]
UPI000719E9C21.010e-1630.42acyl-CoA synthetase family member 4-like n=1 Tax=P... [more]
A0A5A9NKA6_9TELE7.890e-1534.46Acyl-CoA synthetase family member 4 n=1 Tax=Triplo... [more]
A0A2R2MQU1_LINUN4.860e-1431.79acyl-CoA synthetase family member 4 n=1 Tax=Lingul... [more]
UPI001ED8B69A1.020e-1323.02beta-alanine-activating enzyme n=1 Tax=Ischnura el... [more]
T1IUS3_STRMM1.900e-1335.25AMP-binding_C domain-containing protein n=1 Tax=St... [more]
A0A1B6HCM2_9HEMI2.430e-1329.00Uncharacterized protein n=2 Tax=Homalodisca litura... [more]
A0A218VEY3_9PASE1.000e-1228.76Acyl-CoA synthetase family member 4 n=1 Tax=Lonchu... [more]
UPI00188606123.250e-1231.48beta-alanine-activating enzyme isoform X1 n=2 Tax=... [more]
E0W429_PEDHC1.360e-1121.33AMP dependent ligase, putative n=1 Tax=Pediculus h... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_109contigContig_109:520128..521303 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|173978|e_gw1.109.77.1
BRITEko00000,ko01000,ko01004
KEGG koko:K00142
DescriptionPQQ-like domain
COG categoryQ
Max annot lvl33208|Metazoa
EggNOG OGsCOG1520@1|root,KOG4649@2759|Eukaryota,39NFP@33154|Opisthokonta,3CPZZ@33208|Metazoa,3E65F@33213|Bilateria
Evalue2.2e-22
Seed ortholog7668.SPU_009308-tr
Hectar predicted targeting categoryother localisation
TranscriptId174300
TrackFilteredModels1
ProteinId173978
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173978gene_13028Tribonema minus UTEX_B_3156 geneContig_109 520128..521303 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_13028_1exon_13028_1Tribonema minus UTEX_B_3156 exonContig_109 520128..521303 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_13028CDS_13028Tribonema minus UTEX_B_3156 CDSContig_109 520128..521303 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173978Trimin1|173978|e_gw1.109.77.1Tribonema minus UTEX_B_3156 polypeptideContig_109 520128..521303 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_13028 ID=mRNA_13028|Name=jgi.p|Trimin1|173978|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1176bp|location=Sequence derived from alignment at Contig_109:520128..521303+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACGGGGGCTGCAGTCATAGCATCTCCATCGCCAACGTCCTCTGCAGC
TGCAGTTTCAACGCACGCTCCTGTGGCTCTGCGGCTTGCGTGGTCGCTGC
CACTGGGCAAGTGTGTTGATGCCACGCCGCTGGTACTCGCTGATCCTGCA
GTCGCGGGGGCGCAGTGCCTGTGCGGCGGCGCAGCTGCGGGCGCGCTTGT
GGTGATTGGCTCTCACAGCGGCCAAGTCAAAGCGGCTAGTCTGGACACTG
GCGAGGAGGTGTGGGCACAGCACTTTGGCTGCAGGGTGGAGTCTTCCCCT
GCGGCTAGCGCAGATGGCTCCCTGGTGTACATCGGCTGCCACGATGGCTG
GCTGCGCGCTCTGCACACAGCAGACGGCAGCCTTGCCTGGTCCTTCGACA
CTGGCGATATCATCAAGTGCTCGCCGACAAGCGCTACGTTTGCAGCCAAC
ACGCCAGTGCTCCTAGTGGGCTCACACGCCAAGACGCTATCTTGTCTAGC
GCAGTCAACAGGCGCGCTGGTGTGGCAGTGGGACCCCGGCGGACACATCT
TTGCGTCACCTGCGCACGTGCCATCAGCAGCGCTTGTCTTTGTCGCCACC
ACCGCCGGTGTCGTTGCCAGCCTCACCGAAGGCGGCGAGCTGCGCTGGCG
CCACAACGCGCCTGCGCCAGTATTTGCGGATCCTGCTGTTGCCAACAGCG
GCTCTGCGCTGGTCGTTGCATGTGTCAGCGGCACCGTTCTAGGGCTGGCG
TGCAGCAGCGGCGTGCAGCTGTGGCAGTTGAAGTTAAACTCTGCCATTTT
CTCCAGTCCATGTGTGGCCAACCACACGGTCCATGCAGGGTCTGAGGTCG
TTGCATTTGGTGACCACTCGGGCTGTATAACATGCGTGAGGGTTGCTTGT
GGTACCGTGATATGGCATCAATCAGTGGACAGAAATCGTGCCACTACTGC
ATATGCATCACCATTTGCTTGTAGCTGCAAAGGGCTCACGGTGTTCTGTG
TAGCAACATCTTGTGGCATGCTTGCAGTTTTGGAACAAGTCTCGGGTGCT
GTCGTTTCGCGTGCACTGGCGCCTGGACAGGTCTTCTCTAGCCCTGTAAT
GGTAGGTGATCAGCTGCTGATTGGCTGCCGCAACGATCACCTGCTCTGTT
ACAAGGTGGCTGTTGGACGTGACTAG
back to top

protein sequence of jgi.p|Trimin1|173978

>Trimin1|173978|e_gw1.109.77.1 ID=Trimin1|173978|e_gw1.109.77.1|Name=jgi.p|Trimin1|173978|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=392bp
MTGAAVIASPSPTSSAAAVSTHAPVALRLAWSLPLGKCVDATPLVLADPA
VAGAQCLCGGAAAGALVVIGSHSGQVKAASLDTGEEVWAQHFGCRVESSP
AASADGSLVYIGCHDGWLRALHTADGSLAWSFDTGDIIKCSPTSATFAAN
TPVLLVGSHAKTLSCLAQSTGALVWQWDPGGHIFASPAHVPSAALVFVAT
TAGVVASLTEGGELRWRHNAPAPVFADPAVANSGSALVVACVSGTVLGLA
CSSGVQLWQLKLNSAIFSSPCVANHTVHAGSEVVAFGDHSGCITCVRVAC
GTVIWHQSVDRNRATTAYASPFACSCKGLTVFCVATSCGMLAVLEQVSGA
VVSRALAPGQVFSSPVMVGDQLLIGCRNDHLLCYKVAVGRD*
back to top

mRNA from alignment at Contig_109:520128..521303+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_13028 ID=mRNA_13028|Name=jgi.p|Trimin1|173978|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1176bp|location=Sequence derived from alignment at Contig_109:520128..521303+ (Tribonema minus UTEX_B_3156 )
ATGACGGGGGCTGCAGTCATAGCATCTCCATCGCCAACGTCCTCTGCAGC TGCAGTTTCAACGCACGCTCCTGTGGCTCTGCGGCTTGCGTGGTCGCTGC CACTGGGCAAGTGTGTTGATGCCACGCCGCTGGTACTCGCTGATCCTGCA GTCGCGGGGGCGCAGTGCCTGTGCGGCGGCGCAGCTGCGGGCGCGCTTGT GGTGATTGGCTCTCACAGCGGCCAAGTCAAAGCGGCTAGTCTGGACACTG GCGAGGAGGTGTGGGCACAGCACTTTGGCTGCAGGGTGGAGTCTTCCCCT GCGGCTAGCGCAGATGGCTCCCTGGTGTACATCGGCTGCCACGATGGCTG GCTGCGCGCTCTGCACACAGCAGACGGCAGCCTTGCCTGGTCCTTCGACA CTGGCGATATCATCAAGTGCTCGCCGACAAGCGCTACGTTTGCAGCCAAC ACGCCAGTGCTCCTAGTGGGCTCACACGCCAAGACGCTATCTTGTCTAGC GCAGTCAACAGGCGCGCTGGTGTGGCAGTGGGACCCCGGCGGACACATCT TTGCGTCACCTGCGCACGTGCCATCAGCAGCGCTTGTCTTTGTCGCCACC ACCGCCGGTGTCGTTGCCAGCCTCACCGAAGGCGGCGAGCTGCGCTGGCG CCACAACGCGCCTGCGCCAGTATTTGCGGATCCTGCTGTTGCCAACAGCG GCTCTGCGCTGGTCGTTGCATGTGTCAGCGGCACCGTTCTAGGGCTGGCG TGCAGCAGCGGCGTGCAGCTGTGGCAGTTGAAGTTAAACTCTGCCATTTT CTCCAGTCCATGTGTGGCCAACCACACGGTCCATGCAGGGTCTGAGGTCG TTGCATTTGGTGACCACTCGGGCTGTATAACATGCGTGAGGGTTGCTTGT GGTACCGTGATATGGCATCAATCAGTGGACAGAAATCGTGCCACTACTGC ATATGCATCACCATTTGCTTGTAGCTGCAAAGGGCTCACGGTGTTCTGTG TAGCAACATCTTGTGGCATGCTTGCAGTTTTGGAACAAGTCTCGGGTGCT GTCGTTTCGCGTGCACTGGCGCCTGGACAGGTCTTCTCTAGCCCTGTAAT GGTAGGTGATCAGCTGCTGATTGGCTGCCGCAACGATCACCTGCTCTGTT ACAAGGTGGCTGTTGGACGTGACTAG
back to top

Coding sequence (CDS) from alignment at Contig_109:520128..521303+

>mRNA_13028 ID=mRNA_13028|Name=jgi.p|Trimin1|173978|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1176bp|location=Sequence derived from alignment at Contig_109:520128..521303+ (Tribonema minus UTEX_B_3156 )
ATGACGGGGGCTGCAGTCATAGCATCTCCATCGCCAACGTCCTCTGCAGC
TGCAGTTTCAACGCACGCTCCTGTGGCTCTGCGGCTTGCGTGGTCGCTGC
CACTGGGCAAGTGTGTTGATGCCACGCCGCTGGTACTCGCTGATCCTGCA
GTCGCGGGGGCGCAGTGCCTGTGCGGCGGCGCAGCTGCGGGCGCGCTTGT
GGTGATTGGCTCTCACAGCGGCCAAGTCAAAGCGGCTAGTCTGGACACTG
GCGAGGAGGTGTGGGCACAGCACTTTGGCTGCAGGGTGGAGTCTTCCCCT
GCGGCTAGCGCAGATGGCTCCCTGGTGTACATCGGCTGCCACGATGGCTG
GCTGCGCGCTCTGCACACAGCAGACGGCAGCCTTGCCTGGTCCTTCGACA
CTGGCGATATCATCAAGTGCTCGCCGACAAGCGCTACGTTTGCAGCCAAC
ACGCCAGTGCTCCTAGTGGGCTCACACGCCAAGACGCTATCTTGTCTAGC
GCAGTCAACAGGCGCGCTGGTGTGGCAGTGGGACCCCGGCGGACACATCT
TTGCGTCACCTGCGCACGTGCCATCAGCAGCGCTTGTCTTTGTCGCCACC
ACCGCCGGTGTCGTTGCCAGCCTCACCGAAGGCGGCGAGCTGCGCTGGCG
CCACAACGCGCCTGCGCCAGTATTTGCGGATCCTGCTGTTGCCAACAGCG
GCTCTGCGCTGGTCGTTGCATGTGTCAGCGGCACCGTTCTAGGGCTGGCG
TGCAGCAGCGGCGTGCAGCTGTGGCAGTTGAAGTTAAACTCTGCCATTTT
CTCCAGTCCATGTGTGGCCAACCACACGGTCCATGCAGGGTCTGAGGTCG
TTGCATTTGGTGACCACTCGGGCTGTATAACATGCGTGAGGGTTGCTTGT
GGTACCGTGATATGGCATCAATCAGTGGACAGAAATCGTGCCACTACTGC
ATATGCATCACCATTTGCTTGTAGCTGCAAAGGGCTCACGGTGTTCTGTG
TAGCAACATCTTGTGGCATGCTTGCAGTTTTGGAACAAGTCTCGGGTGCT
GTCGTTTCGCGTGCACTGGCGCCTGGACAGGTCTTCTCTAGCCCTGTAAT
GGTAGGTGATCAGCTGCTGATTGGCTGCCGCAACGATCACCTGCTCTGTT
ACAAGGTGGCTGTTGGACGTGACTAG
back to top