mRNA_12553 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|351031
Unique NamemRNA_12553
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|351031 vs. uniprot
Match: A0A835YL83_9STRA (Mis18 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL83_9STRA)

HSP 1 Score: 655 bits (1690), Expect = 2.920e-234
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1 
Query:    1 MGVPRPPPLNVGGVGGGGDGGMLXXXXNGGIVRTPAHRSNHFAVRRPPVVFQCSQCSFILGHTTASEVLDSQKVKLGLQEFVQVEAAPGTSLHAVMTVSHAKYDEGSGFRQLACANAKCKSLVGRTYYSTPLHMDHLRGVYLLCAPAITSYELSAEHSEPQPNFNLSPRGPPLLNGASAAAAAPVHEGAGSGGEAQLAHATDMGDAEAAVALAGAAASAKAFQGESTSKRLQNHWAEATGLAAAAVANLATPSDDNCYTPRNSRASTTVKTEGPWHTSPRAAAAXXXXXXXXXXXXXXXXXXXXVDARLSSSAAERHNLKFASARSSSSHGLSTAGPSGGHTGSPVTAGYHRSGAAAXXXXXXXXXXSQPLSPIEPWTTVQ 1143
            MGVPRPPPLNVGGVGGGGDGGMLXXXXNGGIVRTPAHRSNHFAVRRPPVVFQCSQCSFILGHTTASEVLDSQKVKLGLQEFVQVEAAPGTSLHAVMTVSHAKYDEGSGFRQLACANAKCKSLVGRTYYSTPLHMDHLRGVYLLCAPAITSYELSAEHSEPQPNFNLSPRGPPLLNGASAAAAAPVHEGAGSGGEAQLAHATDMGDAEAAVALAGAAASAKAFQGESTSKRLQNHWAEATGLAAAAVANLATPSDDNCYTPRNSRASTTVKTEGPWHTSPRAAAAXXXXXXXXXXXXXXXXXXXXVDARLSSSAAERHNLKFASARSSSSHGLSTAGPSGGHTGSPVTAGYHRSGAAAXXXXXXXXXXSQPLSPIEPWTTVQ
Sbjct:    1 MGVPRPPPLNVGGVGGGGDGGMLXXXXNGGIVRTPAHRSNHFAVRRPPVVFQCSQCSFILGHTTASEVLDSQKVKLGLQEFVQVEAAPGTSLHAVMTVSHAKYDEGSGFRQLACANAKCKSLVGRTYYSTPLHMDHLRGVYLLCAPAITSYELSAEHSEPQPNFNLSPRGPPLLNGASAAAAAPVHEGAGSGGEAQLAHATDMGDAEAAVALAGAAASAKAFQGESTSKRLQNHWAEATGLAAAAVANLATPSDDNCYTPRNSRASTTVKTEGPWHTSPRAAAAXXXXXXXXXXXXXXXXXXXXVDARLSSSAAERHNLKFASARSSSSHGLSTAGPSGGHTGSPVTAGYHRSGAAAXXXXXXXXXXSQPLSPIEPWTTVQ 381
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BLAST of jgi.p|Trimin1|351031 vs. uniprot
Match: A0A5D6YEM6_9STRA (Mis18 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEM6_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 4.920e-7
Identity = 38/108 (35.19%), Postives = 58/108 (53.70%), Query Frame = 1 
Query:  142 PVVFQCSQCSFILGHTTASEVLDSQKVKLGLQEFVQVE--AAPGTSLHAVMTVSHAKYDEGSGFRQLACANAKCKSLVGRTYYSTPLHMDHLRGVYLLCAPAITSYEL 459
            PVVFQC  C  + G + A    +++ + + L     V   A P TS            D GS F++L CA  +C++++GR+Y +TPL +D LRG++     AI SY+L
Sbjct:  170 PVVFQCGTCRSVFGDSYAFVGSNAELLLVTLSAVTNVTTGAEPQTSRDGA--------DAGSSFQELLCA--QCQTVLGRSYLTTPLALDALRGLFSFATTAIASYQL 267
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BLAST of jgi.p|Trimin1|351031 vs. uniprot
Match: A0A8B6F7W3_MYTGA (Kinetochore protein Mis18 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6F7W3_MYTGA)

HSP 1 Score: 62.0 bits (149), Expect = 6.860e-7
Identity = 38/107 (35.51%), Postives = 54/107 (50.47%), Query Frame = 1 
Query:  145 VVFQCSQCSFILGHTTASEVLDSQKVKLGLQEFVQVEAAPGTSLHAVMTVSHAKYDEGSGFRQLACANAKCKSLVGRTYYSTPLHMDHLRGVYLLCAPAITSYELSA 465
            +V QCSQCS I+G TTA    D     + L+      A+    +  V+  S    D GS F  L C    C   +GR Y +TP  +DHLRG++ L    +TSY++ +
Sbjct:   27 LVLQCSQCSSIVGDTTAWAFADDVLRTVSLKN-----ASEKVLITEVLDTSKNGTDFGSAFNVLKCE--VCNEEIGRMYRTTPTQLDHLRGLFSLFIDKLTSYQVGS 126
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BLAST of jgi.p|Trimin1|351031 vs. uniprot
Match: A0A6J8BKV4_MYTCO (Mis18 domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8BKV4_MYTCO)

HSP 1 Score: 62.0 bits (149), Expect = 6.860e-7
Identity = 38/107 (35.51%), Postives = 54/107 (50.47%), Query Frame = 1 
Query:  145 VVFQCSQCSFILGHTTASEVLDSQKVKLGLQEFVQVEAAPGTSLHAVMTVSHAKYDEGSGFRQLACANAKCKSLVGRTYYSTPLHMDHLRGVYLLCAPAITSYELSA 465
            +V QCSQCS I+G TTA    D     + L+      A+    +  V+  S    D GS F  L C    C   +GR Y +TP  +DHLRG++ L    +TSY++ +
Sbjct:   27 LVLQCSQCSSIVGDTTAWAFADDVLRTVSLKN-----ASEKVLITEVLETSKNGTDFGSAFNVLKCE--VCNEEIGRMYRTTPTQLDHLRGLFSLFIDKLTSYQVGS 126
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BLAST of jgi.p|Trimin1|351031 vs. uniprot
Match: M9M608_PSEA3 (Mis18 domain-containing protein n=3 Tax=Moesziomyces TaxID=63261 RepID=M9M608_PSEA3)

HSP 1 Score: 59.7 bits (143), Expect = 6.490e-6
Identity = 38/108 (35.19%), Postives = 54/108 (50.00%), Query Frame = 1 
Query:  142 PVVFQCSQCSFILGHTTASEVLDSQKVKLGLQEFVQVEAAPGTSLHAVMTVSHAKYDEGSGFRQLACANAKCKSLVGRTYYSTPLHMDHLRGVYLLCAPAITSYELSA 465
            P+VFQC QC  +LG + A    D++   + L +   V +   T      T +    D G+ F  L C    CK+ VGRTY +TP H+D LR    L   A+T+Y L +
Sbjct:  175 PLVFQCRQCFRLLGDSFAFVATDTELGYVVLSDVSDVVSQDTT----FQTSTQPGKDMGATFALLRCGG--CKATVGRTYRTTPRHLDDLRDCASLDVDAVTTYRLGS 276
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BLAST of jgi.p|Trimin1|351031 vs. uniprot
Match: A0A835YN72_9STRA (GCK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN72_9STRA)

HSP 1 Score: 356 bits (913), Expect = 5.980e-122
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 3 
Query:   87 MLQARAASFALLSVLHASAAAAPASSEPPHPSSEVEHAAVETKQQDEEPEQKGEGGAAPKGEEDWCSPYPEEDYFVDENEPEEPTTCSLCIMMKNGPCPMTFRRWARCTEVAKERGEDDKVACRCANIFMDLYRCMNENPNYFMIEKDGQGNDTAEDAHAAESASDSPTEADAAAVAAAGVATA 638
            MLQARAASFALLSVLHASAAAAPASSEPPHPSSEVEHAAVETKQQDEEPEQKGEGGAAPKGEEDWCSPYPEEDYFVDENEPEEPTTCSLCIMMKNGPCPMTFRRWARCTEVAKERGEDDKVACRCANIFMDLYRCMNENPNYFMIEKDGQGNDTAEDAHAAESASDSPTEADAAAVAAAGVATA
Sbjct:    1 MLQARAASFALLSVLHASAAAAPASSEPPHPSSEVEHAAVETKQQDEEPEQKGEGGAAPKGEEDWCSPYPEEDYFVDENEPEEPTTCSLCIMMKNGPCPMTFRRWARCTEVAKERGEDDKVACRCANIFMDLYRCMNENPNYFMIEKDGQGNDTAEDAHAAESASDSPTEADAAAVAAAGVATA 184
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351031 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YL83_9STRA2.920e-234100.00Mis18 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A5D6YEM6_9STRA4.920e-735.19Mis18 domain-containing protein n=1 Tax=Pythium br... [more]
A0A8B6F7W3_MYTGA6.860e-735.51Kinetochore protein Mis18 n=1 Tax=Mytilus gallopro... [more]
A0A6J8BKV4_MYTCO6.860e-735.51Mis18 domain-containing protein n=1 Tax=Mytilus co... [more]
M9M608_PSEA36.490e-635.19Mis18 domain-containing protein n=3 Tax=Moesziomyc... [more]
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BLAST of jgi.p|Trimin1|351031 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YN72_9STRA5.980e-122100.00GCK domain-containing protein n=1 Tax=Tribonema mi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_78contigContig_78:534443..539230 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|351031|estExt_Genemark1.C_Ctg_780054
DescriptionKinetochore protein mis18. Source PGD
COG categoryS
Max annot lvl121069|Pythiales
EggNOG OGs2E2HP@1|root,2S9R8@2759|Eukaryota,1MAS3@121069|Pythiales
Evalue4.9e-08
Seed ortholog42099.EPrPV00000020532
Hectar predicted targeting categoryother localisation
TranscriptId351353
TrackFilteredModels1
ProteinId351031
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351031gene_12553Tribonema minus UTEX_B_3156 geneContig_78 534443..539230 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351031Trimin1|351031|estExt_Genemark1.C_Ctg_780054Tribonema minus UTEX_B_3156 polypeptideContig_78 534737..539230 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12553_5exon_12553_5Tribonema minus UTEX_B_3156 exonContig_78 534443..535213 -
exon_12553_4exon_12553_4Tribonema minus UTEX_B_3156 exonContig_78 536257..536523 -
exon_12553_3exon_12553_3Tribonema minus UTEX_B_3156 exonContig_78 537224..537369 -
exon_12553_2exon_12553_2Tribonema minus UTEX_B_3156 exonContig_78 537998..538033 -
exon_12553_1exon_12553_1Tribonema minus UTEX_B_3156 exonContig_78 539011..539230 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_12553UTR3_12553Tribonema minus UTEX_B_3156 three_prime_UTRContig_78 534443..534736 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12553CDS_12553Tribonema minus UTEX_B_3156 CDSContig_78 539011..539230 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12553 ID=mRNA_12553|Name=jgi.p|Trimin1|351031|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1440bp|location=Sequence derived from alignment at Contig_78:534443..539230- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGTGTACCCCGCCCCCCTCCTCTGAACGTCGGCGGCGTTGGCGGCGG
AGGCGATGGCGGCATGCTTGGCGTTGGCGGCAATGGCGGTATTGTGCGCA
CACCCGCGCACAGGAGCAACCACTTCGCAGTCAGGCGCCCTCCCGTTGTG
TTCCAGTGCTCTCAGTGCAGCTTCATCCTGGGGCATACGACGGCATCGGA
GGTGCTAGACTCGCAGAAAGTCAAGCTAGGGCTGCAGGAATTTGTTCAAG
TAGAAGCCGCGCCAGGCACGAGCCTCCATGCTGTGATGACGGTGTCTCAC
GCAAAGTACGACGAGGGCAGCGGTTTCAGGCAGCTGGCCTGCGCCAACGC
AAAGTGCAAGAGCCTGGTGGGCCGCACGTATTATAGCACCCCGTTGCACA
TGGACCATTTGCGCGGCGTCTACCTGCTCTGCGCGCCCGCGATCACCAGC
TACGAGCTGAGCGCTGAGCACAGCGAACCACAGCCAAACTTCAACCTGTC
GCCTCGGGGTCCTCCTCTGCTCAACGGCGCCTCTGCGGCAGCGGCGGCGC
CTGTGCATGAGGGGGCGGGGTCAGGGGGCGAAGCTCAGCTGGCGCATGCA
ACAGACATGGGGGATGCGGAGGCGGCCGTGGCACTGGCGGGGGCTGCGGC
GAGTGCCAAGGCTTTTCAGGGGGAGTCAACTTCAAAGCGGCTGCAGAACC
ACTGGGCCGAGGCCACAGGCCTCGCCGCTGCCGCCGTGGCGAACCTCGCC
ACCCCCAGCGACGACAACTGTTACACCCCCCGTAACAGTCGCGCCAGCAC
CACCGTCAAGACGGAGGGCCCTTGGCACACAAGCCCCCGCGCCGCCGCCG
CCGCTGCTGCCGCTGCCGCAGTGCCAGCTCCCGTGGCTGCGCCCCCTCCC
CTGCCGCCCCCGGTGGACGCCAGGCTGAGCAGCAGCGCTGCGGAGCGTCA
CAACTTGAAGTTTGCCAGCGCGCGCAGCAGCAGCAGCCATGGCCTGAGCA
CTGCGGGTCCTAGCGGTGGCCACACGGGGTCTCCTGTAACTGCTGGGTAC
CACAGGTCAGGGGCGGCGGCAGCGGCAGCGGCAGCGGCAGCGGCGGCAGC
GTCGCAGCCGCTGTCGCCGATCGAGCCTTGGACCACCGTGCAATAGACAC
TTCAAACTTCACTCTCTGCCGCGTGAGGATACCCTAAGAGGCGGCGGCGA
TGCCGAGGAAACATGACTGGCACCGGGCACACAGATGGAAGATTGAACTT
CAACTTGAACTTTAAGTTGAACATCAAGTTGAAGGCGCCGGGGACCCCCC
GCCGCGCCATGCCCGGGCTGCCATCATCAACAGCTGACACACTAGGGGTA
GGGCGAAAGGGGCTTCATCGTTGCCGCTTGGAACATGAGTGCAAGTGTGG
GGATTCGGACATACACGGCCGTACACAGGGGGGGTTCAAG
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protein sequence of jgi.p|Trimin1|351031

>Trimin1|351031|estExt_Genemark1.C_Ctg_780054 ID=Trimin1|351031|estExt_Genemark1.C_Ctg_780054|Name=jgi.p|Trimin1|351031|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=382bp
MGVPRPPPLNVGGVGGGGDGGMLGVGGNGGIVRTPAHRSNHFAVRRPPVV
FQCSQCSFILGHTTASEVLDSQKVKLGLQEFVQVEAAPGTSLHAVMTVSH
AKYDEGSGFRQLACANAKCKSLVGRTYYSTPLHMDHLRGVYLLCAPAITS
YELSAEHSEPQPNFNLSPRGPPLLNGASAAAAAPVHEGAGSGGEAQLAHA
TDMGDAEAAVALAGAAASAKAFQGESTSKRLQNHWAEATGLAAAAVANLA
TPSDDNCYTPRNSRASTTVKTEGPWHTSPRAAAAAAAAAAVPAPVAAPPP
LPPPVDARLSSSAAERHNLKFASARSSSSHGLSTAGPSGGHTGSPVTAGY
HRSGAAAAAAAAAAAAASQPLSPIEPWTTVQ*
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mRNA from alignment at Contig_78:534443..539230-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12553 ID=mRNA_12553|Name=jgi.p|Trimin1|351031|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4788bp|location=Sequence derived from alignment at Contig_78:534443..539230- (Tribonema minus UTEX_B_3156 )
ATGGGTGTACCCCGCCCCCCTCCTCTGAACGTCGGCGGCGTTGGCGGCGG
AGGCGATGGCGGCATGCTTGGCGTTGGCGGCAATGGCGGTATTGTGCGCA
CACCCGCGCACAGGAGCAACCACTTCGCAGTCAGGCGCCCTCCCGTTGTG
TTCCAGTGCTCTCAGTGCAGCTTCATCCTGGGGCATACGACGGCATCGGA
GGTGCTAGACTCGCAGAAAGGTGAGCACAACGGACATGCAGTGCTGCCAG
CAGCAGCTTTTGCAGTTTGATTCATGCACCATGCTTCAGCTGTCACGCTA
CTGAACACGCCAACGCCTCAATGATGCAGCAATGTTTCCCTCTAGTATAC
TTTTTGCCGCTTTCCTGTCATAGGGGTATTTTCTTAGTGCAAGCATCATA
GAATGCTCGAGCCACGCTACTCAATCGCTGGTATGTAGATAAAGAAGGCT
GTATCCAGCGTCGTCGACAATATAAGTGATGAGAAACTGTTATGGCGCAT
GTTTTTTTGTCAACAGCTACTAGTAATAGTGCATGTGGGCCGAGTGCCTT
GGCCAGCGCCCGCATGAACAGTGATTGTGCAGCAATTTCTTTCATATTTT
CATGTCTGTGCTCATTGAAAACACTGACCGCTGTGCGCGGCCTTCAAGAG
TTGCATAGCAAAAATGGGGGGGCGACGCTGCATACCACCTAGCGACACGC
TCTCTGGGTTCAAGGAGTGTCGCTGTTTAAAATATGGTTCGGTAGACATT
GTCATGAAACCTTCAAGTCTTAGGGACACGGCATCTCTGGGCAGTTGCAT
TTTCCTCACTGACAGTTGTCAATCAGCATACTTATTGAAGCATTCTAAAG
AACGAAGTGCTCGCATGATTGAATCCTGCATGAGTAAGCGACATGCCTGA
AAACCATGGCGGTCAACTTAAAGTCAGCAGTACCTTGAACTCTGGCTGCA
CTGAATCTCCACACATTGTCCTGCGGCACTGGCTTTGGATCCTGGACATG
CGGTCGTTGTCAACGAGCTTGGTATGTGCCAGTGCACACTGCTGCCAAGC
AGGCGCAGCGCTGCAACTTGAAGTTTGAACCGCGCTGACGGCGAGAGCTG
TCATTACGTACTCCATACATATACCCAGTAAGGACATGCATACATACCCT
TCTGACTGCTTGTCTTGCGTCACCTGTCGTGCGCTGTATCGCTGCAGTCA
AGCTAGGGCTGCAGGAATTTGTTCAAGTAGAAGGTGAGTCGGTGGCACCA
ACAAACATATTTTCAGCACACTGTTGCTGTCACACACTGTTATTGTTGTG
GCACATTGTTGCTCTGTGTGCAGTGCTGATGCACTGCTGCATACACAACT
GTTTGTATGGGTGTTTGGTTCAGTTGGTTCCATGATTCAGCAGTGAATCA
ACATCAGTCGTTGCCTGACCCTAATCAGTCATCCTAAGGAGGGGTTACAG
TCACACCATTGACTGCATGTCACAATTGTGAAAGCCAACAGCCAAACATG
CCTGCCATCACGCGCATGGCCAGGCATTTAGGGATCGTTCAACAACTTGA
AGATGCTGTCTCTCCATGTCAAATCACAGCGGACTGTGTGTGTAGCTCAT
GCTGTCACCCTTCCGCTGTAACAGCAGCTGTGTCATGGTCTGCCCTCTGA
CAGTGCGTCACATTGTAGTCCATGTGTACTCCATGTGTATCATACGATAC
AAGCGTGTACTGCAACACCACAAGCCAGGTTCCACAGCGCGTGTCACTTC
CTTGGTTCTTGGATCGTGCGGTGCTCATGGTGTATGCCACTGTGCCGATG
CACTGCTGCCAGCATTCAATCTTATTTTCTGACGCATTTCCACTTCAACT
TGAACTTGCAGCCGCGCCAGGCACGAGCCTCCATGCTGTGATGACGGTGT
CTCACGCAAAGTACGACGAGGGCAGCGGTTTCAGGCAGCTGGCCTGCGCC
AACGCAAAGTGCAAGAGCCTGGTGGGCCGCACGTATTATAGCACCCCGTT
GCACATGGTGAGTGTGTTGAACTTTGCCAGCGATCATGACTTGTGGTTGA
CTTGAATGTGACGTGTGATTGGGACTTGCGCCCGCAGTAGTGTTACAGTG
TACTATAGCACCCCCTTTGCACATGGCGAGTGCGTTTGCCAGCGATCGTG
ACTTGTGATTGAGACTCTGACCTGTGGTTGAGACTTGCGCCGCAGTAGTG
TCGTGTTGGTGCTGCATGCGGTTGACGATGTCCTGTTACTTCAAGTTGAG
TCAGCACTATGAGGTGTCAGTGCTAGCTAGGGTGAGGGTTAGAGGTAGGG
TTACGGTGTGTCTGTGCAAATGATTGCCATGTTGAAGCGTGCTGCACCGT
ATGAATGTGGCAGCGGATTGTGCTGGTGACAAGCACCTTTGTGCGCACAA
TATGCAGCGTGCTGTTTACACCGCTTCAATTTTGAACTTTGACTGTAGCA
GCACAATTCGCTGGTGCACTTTGGAAGCGCGTGCTATTTGCACAGTTTCG
ATGTTAAACTTTGACCATAAGGCGTGCTATCTCAGCTCTGGCTTGTGTGT
ATGCTGATGCTCCTAGCATCCATGTACTTGTGTGCGAACAGTGAGTCTAG
GGTCACGAACCCCCAGCCCCCCCCCCCCCCCCTTTATCAGCATCAACGTG
GATCAGTATTAAGCTTAGTAATCAATACCTACATGCCTTTCTGTCACCCA
TTGGCAGGACCATTTGCGCGGCGTCTACCTGCTCTGCGCGCCCGCGATCA
CCAGCTACGAGCTGAGCGCTGAGCACAGCGAACCACAGCCAAACTTCAAC
CTGTCGCCTCGGGGTCCTCCTCTGCTCAACGGCGCCTCTGCGGCAGCGGC
GGCGCCTGTGCATGAGGGGGCGGGGTCAGGGGGCGAAGCTCAGCTGGCGC
ATGCAACAGACATGGGGGATGCGGAGGCGGCCGTGGCACTGGCGGGGGCT
GCGGCGAGTGCCAAGGCTTTTCAGGTCAGTGGGACATTTCTACAACTTCC
AATAAATTTTTTTTTTTTCATGCAGAAATATAGTCGGTCAAGGGGAAATT
GTTGAGAGATTTCCGCGTGCTGGCATGGTCGTGTAGCCTCTGTTGCTGTG
GATTATGTAATCTGCTGGTATGCACGAATGTAGGAGTTTTCCTACATGCA
AGGATGTATTAATGCCGTTCTGTGCTTTGGATGGTGAGACTCAACACCCA
GCATAGTTGAGACAGGGGCTCCTGCGGCAACGCTGGTGAAGTTGCTGCAG
GCATGTATGTATGCAGGCATGTATGCATGCAGGCAGTTAATGTACGCTGT
CTCCGGCATCTACAGCTGCACAACGTACATGGTGATCTTATATTCTTTGG
GCAACACCACCACTCAACCTACTGGAAGTATGTGGATGACCATTTTGAAA
GGTGGACATCTTCAAGTTGAGGCACATGCCAATGCGGCCGTAATGTGAGG
CGCATGAGCAACATGCCAGGTGCGCGGGTTTGCACACGGTTACCCTGAAC
AGTAACCCTATACAGACCATGATCAGCACGCCAATAACTGGATGGCAACT
GTAACTGTGAGGTGCTAATCTTGGTGTGCCGAAGCTTCCACATGTTGTCA
CTGTGCCCTCCCGAGGGCAACGCTTGCATTAGAGATTTTCGCTGAGGTGG
TGAACTCATCAATATCATCATGTGTCCCAAAATCAAAACTGGTCATTGAG
GCTCAGCTTGTGGCCACGCTTGGTGGTGATGTTTGAATTGCGATCAAGTT
GGGCTGGACACTGCCGCACGTCATACGCTGCCAGTGGGCATGTAGAGTCT
CATGTTTCACGCCTGAGAGTTGATTGCCACAGCTGTGCCATGCTGCCACC
TCCTTAGGAGAGGTTCGAGGTTAGAGTCACCTTTGCGTTTAGTGTTGAAA
CTTTCCTTAGGCGCTGAAACGGGGCATGTTCTTTCGTTTGCGTTGCGCAT
GACCACCGCCTGTGAAGTCAAAAAGCTCATGGCATACTTCAACACTTCAC
AAACTTCAACACTGCAGGGGGAGTCAACTTCAAAGCGGCTGCAGAACCAC
TGGGCCGAGGCCACAGGCCTCGCCGCTGCCGCCGTGGCGAACCTCGCCAC
CCCCAGCGACGACAACTGTTACACCCCCCGTAACAGTCGCGCCAGCACCA
CCGTCAAGACGGAGGGCCCTTGGCACACAAGCCCCCGCGCCGCCGCCGCC
GCTGCTGCCGCTGCCGCAGTGCCAGCTCCCGTGGCTGCGCCCCCTCCCCT
GCCGCCCCCGGTGGACGCCAGGCTGAGCAGCAGCGCTGCGGAGCGTCACA
ACTTGAAGTTTGCCAGCGCGCGCAGCAGCAGCAGCCATGGCCTGAGCACT
GCGGGTCCTAGCGGTGGCCACACGGGGTCTCCTGTAACTGCTGGGTACCA
CAGGTCAGGGGCGGCGGCAGCGGCAGCGGCAGCGGCAGCGGCGGCAGCGT
CGCAGCCGCTGTCGCCGATCGAGCCTTGGACCACCGTGCAATAGACACTT
CAAACTTCACTCTCTGCCGCGTGAGGATACCCTAAGAGGCGGCGGCGATG
CCGAGGAAACATGACTGGCACCGGGCACACAGATGGAAGATTGAACTTCA
ACTTGAACTTTAAGTTGAACATCAAGTTGAAGGCGCCGGGGACCCCCCGC
CGCGCCATGCCCGGGCTGCCATCATCAACAGCTGACACACTAGGGGTAGG
GCGAAAGGGGCTTCATCGTTGCCGCTTGGAACATGAGTGCAAGTGTGGGG
ATTCGGACATACACGGCCGTACACAGGGGGGGTTCAAG
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Coding sequence (CDS) from alignment at Contig_78:534443..539230-

>mRNA_12553 ID=mRNA_12553|Name=jgi.p|Trimin1|351031|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1146bp|location=Sequence derived from alignment at Contig_78:534443..539230- (Tribonema minus UTEX_B_3156 )
ATGGGTGTACCCCGCCCCCCTCCTCTGAACGTCGGCGGCGTTGGCGGCGG
AGGCGATGGCGGCATGCTTGGCGTTGGCGGCAATGGCGGTATTGTGCGCA
CACCCGCGCACAGGAGCAACCACTTCGCAGTCAGGCGCCCTCCCGTTGTG
TTCCAGTGCTCTCAGTGCAGCTTCATCCTGGGGCATACGACGGCATCGGA
GGTGCTAGACTCGCAGAAAGTCAAGCTAGGGCTGCAGGAATTTGTTCAAG
TAGAAGCCGCGCCAGGCACGAGCCTCCATGCTGTGATGACGGTGTCTCAC
GCAAAGTACGACGAGGGCAGCGGTTTCAGGCAGCTGGCCTGCGCCAACGC
AAAGTGCAAGAGCCTGGTGGGCCGCACGTATTATAGCACCCCGTTGCACA
TGGACCATTTGCGCGGCGTCTACCTGCTCTGCGCGCCCGCGATCACCAGC
TACGAGCTGAGCGCTGAGCACAGCGAACCACAGCCAAACTTCAACCTGTC
GCCTCGGGGTCCTCCTCTGCTCAACGGCGCCTCTGCGGCAGCGGCGGCGC
CTGTGCATGAGGGGGCGGGGTCAGGGGGCGAAGCTCAGCTGGCGCATGCA
ACAGACATGGGGGATGCGGAGGCGGCCGTGGCACTGGCGGGGGCTGCGGC
GAGTGCCAAGGCTTTTCAGGGGGAGTCAACTTCAAAGCGGCTGCAGAACC
ACTGGGCCGAGGCCACAGGCCTCGCCGCTGCCGCCGTGGCGAACCTCGCC
ACCCCCAGCGACGACAACTGTTACACCCCCCGTAACAGTCGCGCCAGCAC
CACCGTCAAGACGGAGGGCCCTTGGCACACAAGCCCCCGCGCCGCCGCCG
CCGCTGCTGCCGCTGCCGCAGTGCCAGCTCCCGTGGCTGCGCCCCCTCCC
CTGCCGCCCCCGGTGGACGCCAGGCTGAGCAGCAGCGCTGCGGAGCGTCA
CAACTTGAAGTTTGCCAGCGCGCGCAGCAGCAGCAGCCATGGCCTGAGCA
CTGCGGGTCCTAGCGGTGGCCACACGGGGTCTCCTGTAACTGCTGGGTAC
CACAGGTCAGGGGCGGCGGCAGCGGCAGCGGCAGCGGCAGCGGCGGCAGC
GTCGCAGCCGCTGTCGCCGATCGAGCCTTGGACCACCGTGCAATAG
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