mRNA_12474 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Match: A0A835YK57_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK57_9STRA) HSP 1 Score: 163 bits (412), Expect = 5.350e-51 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 Query: 1 QARLYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAPRALFRAGKFY 243 QARLYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAPRALFRAGKFY Sbjct: 1 QARLYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAPRALFRAGKFY 81
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Match: A0A835ZFW0_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW0_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.330e-27 Identity = 55/66 (83.33%), Postives = 62/66 (93.94%), Query Frame = 1 Query: 1 QARLYYDDFEVQT-MAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTAC 195 +ARL+Y++F+VQT +AYRAPEVLHGCPFG PAD YSLGVLLLEAVLGRPLFRTA+SR GLAIQTAC Sbjct: 269 EARLHYENFDVQTTLAYRAPEVLHGCPFGPPADAYSLGVLLLEAVLGRPLFRTAASRAGLAIQTAC 334
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Match: A0A0M0JF16_9EUKA (Serine threonine protein kinase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JF16_9EUKA) HSP 1 Score: 82.0 bits (201), Expect = 1.200e-16 Identity = 44/80 (55.00%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 1 QARLYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAPRALFRAGKF 240 +A Y+DDFEVQT+AYRAPEV++G PFG D++S GV L E GR L A+SR GLA++ A LG P LF AGK+ Sbjct: 5 EAPAYHDDFEVQTLAYRAPEVVYGVPFGCAIDLWSFGVTLAELYSGRALLH-AASRGGLAVELAGMLGQPPPRLFGAGKY 83
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Match: A0A6P8HBB1_ACTTE (uncharacterized protein LOC116290059 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HBB1_ACTTE) HSP 1 Score: 81.3 bits (199), Expect = 3.860e-16 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 10 LYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAPRALFRAGKFY 243 LYYD+FE+QT+ YRAPEV+ G PFG DM+SLG ++ E LG PLF S++G+ + LG PR F++GKFY Sbjct: 247 LYYDNFELQTLLYRAPEVMFGVPFGPEIDMWSLGCIVAELYLGEPLFME-QSKMGILQEMVSVLGPFPRIPFQSGKFY 323
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Match: A0A1S3IPZ5_LINUN (uncharacterized protein LOC106166302 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IPZ5_LINUN) HSP 1 Score: 80.1 bits (196), Expect = 9.950e-16 Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 1 QARLYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAPRALFRAGKFY 243 + LYYDDFE+QT+ YRAPEV+ G PFGT DM+SLG +L E LG+PLF + ++ L Q LG PR L + GK++ Sbjct: 245 EVSLYYDDFELQTLLYRAPEVMFGIPFGTEVDMWSLGCILAELYLGQPLFGYGNKKLVLE-QITKVLGPFPRDLCQRGKYF 324
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Match: A0A8B7YK66_ACAPL (uncharacterized protein LOC110980534 isoform X1 n=3 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YK66_ACAPL) HSP 1 Score: 79.7 bits (195), Expect = 1.360e-15 Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 10 LYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAPRALFRAGKFY 243 LYYDDFE+QT+ YRAPEV++G PFG DM+SLG +L+E LG PLF A ++ L + LG P +F+ GKFY Sbjct: 249 LYYDDFELQTLLYRAPEVVYGLPFGPEIDMWSLGCILVELYLGEPLF-FAVTKEELLQKMIAVLGPLPVQIFQRGKFY 325
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Match: R1E8W4_EMIHU (Protein kinase domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E8W4_EMIHU) HSP 1 Score: 77.4 bits (189), Expect = 5.390e-15 Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 1 QARLYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAPRALFRAGKFY 243 +++ YYD F+VQT+ YRA EV+ G PFG DM+SLGV L E GR L + A+SR GLA+Q A LG P+ LF K++ Sbjct: 141 ESKAYYDTFDVQTLGYRAQEVIFGAPFGFGIDMWSLGVTLCELFAGRYLLQ-AASRGGLAVQVAQLLGRPPQGLFDGAKYH 220
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Match: F0YIY7_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIY7_AURAN) HSP 1 Score: 77.8 bits (190), Expect = 6.400e-15 Identity = 43/81 (53.09%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 1 QARLYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLA-IQTACALGAAPRALFRAGKF 240 +A YYDDFE+Q++ YRAPEVL G PFG DM+SLGV+L+EA LGR L R A + G A ALG P A F +F Sbjct: 756 EAVRYYDDFEIQSLGYRAPEVLAGVPFGYAIDMFSLGVVLVEAALGRALLRPARADRGAARAAIEAALGPFPAARFAGARF 836
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Match: A7SKK9_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SKK9_NEMVE) HSP 1 Score: 77.4 bits (189), Expect = 8.720e-15 Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 10 LYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLF--RTASSRVGLAIQTACALGAAPRALFRAGKFY 243 LYY+DFE+QT+ YRAPEV+ G PFG DM+SLG +L E LG+PLF RT + + ++ LG PR F++GKFY Sbjct: 222 LYYNDFELQTLLYRAPEVMFGVPFGQEIDMWSLGCILAELYLGKPLFFGRTKTEVLHEIVEI---LGPLPRVPFQSGKFY 298
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Match: UPI00148A6E9E (extracellular signal-regulated kinase 7 isoform X4 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A6E9E) HSP 1 Score: 77.4 bits (189), Expect = 8.730e-15 Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 1 QARLYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFRTASSRVGLAIQTACALGAAPRALFRAGKFY 243 + LY+ DFE+QT+ YRAPEVL G PFGT D++SLG +L E G PLF +S++ + + LG PR +F+ GKFY Sbjct: 61 EVALYFKDFELQTLLYRAPEVLFGLPFGTEIDLWSLGCILAELYSGMPLF-PGTSKIPVIKEMTRLLGPFPRGVFQKGKFY 140 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|134752 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_12474 ID=mRNA_12474|Name=jgi.p|Trimin1|134752|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=243bp|location=Sequence derived from alignment at Contig_77:436841..437083+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGGCGCGCCTCTACTACGACGACTTCGAGGTGCAGACCATGGCGTACAGback to top protein sequence of jgi.p|Trimin1|134752 >Trimin1|134752|gw1.77.36.1 ID=Trimin1|134752|gw1.77.36.1|Name=jgi.p|Trimin1|134752|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=81bp QARLYYDDFEVQTMAYRAPEVLHGCPFGTPADMYSLGVLLLEAVLGRPLFback to top mRNA from alignment at Contig_77:436841..437083+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_12474 ID=mRNA_12474|Name=jgi.p|Trimin1|134752|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=243bp|location=Sequence derived from alignment at Contig_77:436841..437083+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_77:436841..437083+ >mRNA_12474 ID=mRNA_12474|Name=jgi.p|Trimin1|134752|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=243bp|location=Sequence derived from alignment at Contig_77:436841..437083+ (Tribonema minus UTEX_B_3156 )back to top |