mRNA_12416 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|87605
Unique NamemRNA_12416
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A835YPD5_9STRA (Mitochondrial import inner membrane translocase TIM14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPD5_9STRA)

HSP 1 Score: 352 bits (902), Expect = 1.160e-119
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 2 
Query:   74 MLTAVARRAAAAHGAVAVRHQPALAVAARRLVCHQRXXXXXXXXXXXXALRQLFRSSSTDGSSAMQLQQRGLHSTPARRDSTALVVAGLGLTGIAVAGRYTMIAIQEVQRARSRAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE 790
            MLTAVARRAAAAHGAVAVRHQPALAVAARRLVCHQRXXXXXXXXXXXXALRQLFRSSSTDGSSAMQLQQRGLHSTPARRDSTALVVAGLGLTGIAVAGRYTMIAIQEVQRARSRAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE
Sbjct:    1 MLTAVARRAAAAHGAVAVRHQPALAVAARRLVCHQRXXXXXXXXXXXXALRQLFRSSSTDGSSAMQLQQRGLHSTPARRDSTALVVAGLGLTGIAVAGRYTMIAIQEVQRARSRAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE 239
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BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: D7FLD8_ECTSI (Mitochondrial import inner membrane translocase TIM14 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD8_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 5.010e-30
Identity = 92/176 (52.27%), Postives = 114/176 (64.77%), Query Frame = 2 
Query:  263 AMQLQQRGLHSTPARRDSTALVVAGLGLTGIAVAGRYTMIAIQEVQRARSRAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE 790
            A+  Q R +H +  RR+ +++++ G G+   A+  RY ++  Q+ Q A     E           XXXXXXXXXXXXXXXXXXX              +G F     KR YDGGFEE MTR+EAALILGVRESA+ QRIKD+HRRILM+NHPD+GGS YMA KIN AKEILLKG++
Sbjct:   49 ALVSQARDIHVS--RRNESSVLITGAGIAVSAMVARYGLMEYQKYQAAHPEITEEADSGAAGDQTXXXXXXXXXXXXXXXXXXX-------------XAGGFFGAFGKRHYDGGFEEKMTRKEAALILGVRESATAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGRK 209
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BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: K8Z3F4_NANGC (Chaperone-domain containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3F4_NANGC)

HSP 1 Score: 122 bits (306), Expect = 6.140e-30
Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = 2 
Query:  584 KRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 787
            KRFY+GGFE+ MTRREAALILGVRESASPQRIK+AHRRILMLNHPD GGSTY+A KIN AKE+LLKG+
Sbjct:  162 KRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGR 229
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BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A7S3DS72_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DS72_9STRA)

HSP 1 Score: 118 bits (296), Expect = 7.130e-29
Identity = 55/89 (61.80%), Postives = 72/89 (80.90%), Query Frame = 2 
Query:  521 KGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 787
            K  A+ ++++    WF   +  ++Y+GGFE++MTRREAALILGVRES+   RIKDAHR++L+LNHPD GGSTYMAGKIN AKE+L+KGK
Sbjct:  106 KESASGSRENVFKEWFGVGVGSKYYEGGFEDSMTRREAALILGVRESSPASRIKDAHRKLLILNHPDTGGSTYMAGKINEAKELLMKGK 194
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BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A1Z5KKT5_FISSO (DnaJ homolog subfamily C member 19 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKT5_FISSO)

HSP 1 Score: 119 bits (297), Expect = 1.160e-28
Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 2 
Query:  563 WFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 787
            WF   +  ++Y+GGFEE MTRREAALILGVRES+SP RIK+AHR++L+LNHPD GGSTY+AGK+N AKE+LLKGK
Sbjct:  150 WFGASVGAKYYEGGFEEEMTRREAALILGVRESSSPARIKEAHRKLLVLNHPDTGGSTYIAGKLNEAKELLLKGK 224
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BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A6U3QJ97_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QJ97_9STRA)

HSP 1 Score: 117 bits (293), Expect = 5.880e-28
Identity = 52/76 (68.42%), Postives = 69/76 (90.79%), Query Frame = 2 
Query:  563 WFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE 790
            +F   +  ++Y+GGFE+TMT+REAALILGVRES++P+RIKDAHR++L+LNHPD GGSTY++GKIN AKE+LLKGK+
Sbjct:  161 FFNMGVGSKYYEGGFEDTMTKREAALILGVRESSTPKRIKDAHRKLLILNHPDTGGSTYLSGKINEAKELLLKGKK 236
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BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A7S3LBB7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBB7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 6.290e-28
Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = 2 
Query:  563 WFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 787
            WF   +  ++Y+GGFEE MTRREAALILGVRES+S  RIKDAHR++L+LNHPD GGSTY+AGK+N AKE+LLKGK
Sbjct:  150 WFGVGVGAKYYEGGFEEQMTRREAALILGVRESSSTSRIKDAHRKLLILNHPDTGGSTYIAGKLNEAKELLLKGK 224
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BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: W4FRD9_9STRA (J domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FRD9_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.850e-27
Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 2 
Query:  275 QQRGLHSTPARRDSTALVVAGLGLTGIAVAGRYTMIAIQEVQRARSRAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 787
            Q+R LH+T  R    ALVV  LG+   A+ G+Y + A +  Q  ++ +                                   G  A++  S  +  +RN     FYDG FE+ MTRREAALILGVRESASP RI++AHR++L+ NHPD GGST+++ KIN AKE+LL GK
Sbjct:   34 QRRSLHAT--RSQDNALVVGSLGVAAAALGGKYLLEAYEGYQAKKASSPS---------------------------------GTGASSSSSVFNMSYRN-----FYDGPFEDKMTRREAALILGVRESASPDRIRNAHRKLLIANHPDTGGSTFLSSKINEAKELLLGGK 164
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BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A1E7FWH1_9STRA (J domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWH1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.730e-27
Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 2 
Query:  563 WFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 787
            WF   +  ++YDGGFE+TMTRREAALILGVRES+SP R+KDAHR +L+LNHPD GGST++AGK+N AKE+LLKGK
Sbjct:  229 WF--DVGTKYYDGGFEDTMTRREAALILGVRESSSPARVKDAHRNLLILNHPDTGGSTFLAGKLNEAKELLLKGK 301
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BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A7S3K0B7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0B7_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.210e-27
Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = 2 
Query:  566 FRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 787
            F N   +RFYDG FE  MTRREAALILGVRESA+ +RIK+AHRRIL +NHPD GGST++AGK+N AKE+L+KG+
Sbjct:   68 FTNFFARRFYDGPFEAKMTRREAALILGVRESANSERIKEAHRRILRINHPDMGGSTFLAGKVNEAKELLMKGR 141
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YPD5_9STRA1.160e-119100.00Mitochondrial import inner membrane translocase TI... [more]
D7FLD8_ECTSI5.010e-3052.27Mitochondrial import inner membrane translocase TI... [more]
K8Z3F4_NANGC6.140e-3085.29Chaperone-domain containing protein n=1 Tax=Nannoc... [more]
A0A7S3DS72_9STRA7.130e-2961.80Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A1Z5KKT5_FISSO1.160e-2872.00DnaJ homolog subfamily C member 19 n=2 Tax=Fistuli... [more]
A0A6U3QJ97_9STRA5.880e-2868.42Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3LBB7_9STRA6.290e-2872.00Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
W4FRD9_9STRA1.850e-2740.94J domain-containing protein n=4 Tax=Aphanomyces as... [more]
A0A1E7FWH1_9STRA2.730e-2772.00J domain-containing protein n=1 Tax=Fragilariopsis... [more]
A0A7S3K0B7_9STRA4.210e-2770.27Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_71contigContig_71:451060..454882 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|87605|CE87604_102
BRITEko00000,ko03029,ko03110
KEGG koko:K09535,ko:K09539
GOsGO:0001405,GO:0001671,GO:0002082,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0006140,GO:0006605,GO:0006626,GO:0006810,GO:0006839,GO:0006886,GO:0006950,GO:0006996,GO:0007005,GO:0007154,GO:0008047,GO:0008104,GO:0008150,GO:0009267,GO:0009605,GO:0009892,GO:0009987,GO:0009991,GO:0010563,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0017038,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019866,GO:0030150,GO:0030234,GO:0031090,GO:0031323,GO:0031324,GO:0031333,GO:0031667,GO:0031668,GO:0031669,GO:0031966,GO:0031967,GO:0031975,GO:0032781,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034613,GO:0042325,GO:0042326,GO:0042594,GO:0042886,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043457,GO:0043462,GO:0043467,GO:0044087,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044743,GO:0045184,GO:0045934,GO:0045936,GO:0045980,GO:0046907,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0060589,GO:0060590,GO:0062012,GO:0062014,GO:0065002,GO:0065007,GO:0065009,GO:0070585,GO:0070727,GO:0071496,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0080090,GO:0090324,GO:0098772,GO:0098796,GO:0098798,GO:0098800,GO:1900542,GO:1900543,GO:1901856,GO:1902956,GO:1902957,GO:1903578,GO:1903579,GO:1905446,GO:1905447,GO:1990542
Preferred nameMDJ2
Descriptionprotein transport
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2214@1|root,KOG0723@2759|Eukaryota
Evalue1.85e-31
Seed ortholog2880.D7FLD8
Hectar predicted targeting categorymitochondrion
TranscriptId87927
TrackFilteredModels1
ProteinId87605
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|87605gene_12416Tribonema minus UTEX_B_3156 geneContig_71 451060..454882 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|87605Trimin1|87605|CE87604_102Tribonema minus UTEX_B_3156 polypeptideContig_71 451156..454809 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_12416_5exon_12416_5Tribonema minus UTEX_B_3156 exonContig_71 451060..451266 -
exon_12416_4exon_12416_4Tribonema minus UTEX_B_3156 exonContig_71 451945..452138 -
exon_12416_3exon_12416_3Tribonema minus UTEX_B_3156 exonContig_71 453056..453178 -
exon_12416_2exon_12416_2Tribonema minus UTEX_B_3156 exonContig_71 453877..453947 -
exon_12416_1exon_12416_1Tribonema minus UTEX_B_3156 exonContig_71 454589..454882 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_12416UTR3_12416Tribonema minus UTEX_B_3156 three_prime_UTRContig_71 451060..451155 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_12416CDS_12416Tribonema minus UTEX_B_3156 CDSContig_71 454589..454809 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_12416UTR5_12416Tribonema minus UTEX_B_3156 five_prime_UTRContig_71 454810..454882 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_12416 ID=mRNA_12416|Name=jgi.p|Trimin1|87605|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=889bp|location=Sequence derived from alignment at Contig_71:451060..454882- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTTTTTCATACGTCTGGCATACACATATACGAGAGCGGCAAAGGCGTCCA
GATTGGACAAAGGGCAGCACGATATGCTGACAGCGGTGGCCAGACGAGCA
GCGGCTGCACATGGCGCGGTAGCGGTGCGGCACCAGCCAGCCTTGGCGGT
GGCGGCCCGAAGGTTGGTCTGCCACCAAAGGCGGCGAGAGCAGCAGGCGG
AGCAGCAGCATCAGCAAGCTCTGCGCCAGTTGTTCCGGAGCAGCTCTACG
GACGGCAGCTCCGCCATGCAGCTGCAGCAGAGAGGACTTCACAGCACACC
AGCTCGGCGGGACAGCACAGCGCTGGTGGTGGCGGGGCTTGGACTCACAG
GAATTGCAGTTGCAGGGAGGTATACCATGATTGCTATACAGGAGGTACAG
CGAGCGAGGAGCAGAGCAGCGGAAGAAGCGGCTGCTGCAGCAGCGCAACC
AAAGGAGCCGGAACCGCCAGCAGCAGAAGCAGCAGCGGGGAGCGCTGCTG
CGCAAGCGGAGGCTCAGGCGAAGGGCGGCGCAGCGACTGCAAAGAAGTCG
CCTCTCAGCGGCTGGTTCCGCAACCCGCTGGAGAAGCGGTTTTATGACGG
TGGTTTTGAGGAGACCATGACCAGGAGGGAAGCAGCGCTCATACTGGGAG
TCCGCGAGAGCGCCTCACCTCAGAGGATCAAGGATGCGCATCGCCGCATA
CTCATGCTCAACCACCCCGATAGAGGCGGCAGCACGTACATGGCGGGCAA
GATCAACGCTGCAAAGGAGATCCTCCTTAAGGGGAAGGAATGACCACAGC
ATCATGTGTTTTGCACGCAATGCAATGCACAGCTGGCTGAGTACAGTCTC
TGCAAATGGACCTTGACACAGCAATGCTGTTCTCAATGC
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protein sequence of jgi.p|Trimin1|87605

>Trimin1|87605|CE87604_102 ID=Trimin1|87605|CE87604_102|Name=jgi.p|Trimin1|87605|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=240bp
MLTAVARRAAAAHGAVAVRHQPALAVAARRLVCHQRRREQQAEQQHQQAL
RQLFRSSSTDGSSAMQLQQRGLHSTPARRDSTALVVAGLGLTGIAVAGRY
TMIAIQEVQRARSRAAEEAAAAAAQPKEPEPPAAEAAAGSAAAQAEAQAK
GGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQ
RIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE*
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mRNA from alignment at Contig_71:451060..454882-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_12416 ID=mRNA_12416|Name=jgi.p|Trimin1|87605|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3823bp|location=Sequence derived from alignment at Contig_71:451060..454882- (Tribonema minus UTEX_B_3156 )
GTTTTTCATACGTCTGGCATACACATATACGAGAGCGGCAAAGGCGTCCA
GATTGGACAAAGGGCAGCACGATATGCTGACAGCGGTGGCCAGACGAGCA
GCGGCTGCACATGGCGCGGTAGCGGTGCGGCACCAGCCAGCCTTGGCGGT
GGCGGCCCGAAGGTTGGTCTGCCACCAAAGGCGGCGAGAGCAGCAGGCGG
AGCAGCAGCATCAGCAAGCTCTGCGCCAGTTGTTCCGGAGCAGCTCTACG
GACGGCAGCTCCGCCATGCAGCTGCAGCAGAGAGGACTTCACAGGTGCGC
TGCTTCCTCGATGGCACGGTCATCGCCCCAACTGCTTGACAGCATCGCAC
GACAGCGTCAGCAAGACGCTGCTGGCTTTGTTGCTCGGAATATAATACGC
TCAGCAGACAGAAGCAGATAATGCAGCTGGCACTCGCACCTGCCACTGCT
TTGAGGGACAGTTGAAGTTTTTACGTTTGGCGCTGAGCGATGCATACCGC
ACTCTTCAGCTGTGCCAAGAATGGAACATCATGACACCTGCTGCACGCCA
GGCTACTGGGATTGCCAGCGACTTGTGCGAGTTTTTGGCTATTTCGTTGT
CAAATGTTGGGCGCTCTGTAATGGTCTCAGTTGTACTTCATCAATGTCTT
GGACAGGAAGCCTCTGCTGATCACCACAGCTTATGAACAGTGTAGGTACA
GCTTTACTGTAGCAAACTCTAGCCTTCCACTTGCCAACATCAAGCACTTC
ATGTGCAGTTCTCACCTGTACAGATGTGTCGTGTCGTTGTTCAACTTTGG
CCACTGATCAGGATACGTATGAGCGTTGTTCTTGTGGTGCGGTGGGTTAC
CGTAACTCGAGTAGTGGCTATATCGTATTGCAACACACGTTGGCTCATGT
GATGGTCTTTTTTTCTATCTGTTGCGTGCGCGCAGCACACCAGCTCGGCG
GGACAGCACAGCGCTGGTGGTGGCGGGGCTTGGACTCACAGGAATTGCAG
TTGCAGGTGCGTCTCTGCAGAACTTTGGCATGGCTACTTGCAAACGGTAC
TAAATGATCGCTATGCTCCTCTTCTTCCTGCGGCCCTCACAAGTTCTACA
TGCTCAATGTGCTCTCGATCTGAATGTAGACACGTCAGAAATTGCAGCAG
CATTACCCTTGGTTATCGGCATACGGACCAATGTAGCCAGAAGGCCTGGG
GCTACGGTCAATCTTGCATTTTTGAGACATTATTGTCAGCCGCTGGGCAA
ACACTGATGGCAGCATGAATGGTGGCAGCAGCGCTGCTCGCATTACTGAA
GGGGGTCGATGGTGACCTCTTTCTCTCTCTGTGTCAGTCCTAGCTGTGGC
GTGAGGGTCTTGTGTCTAATGGACTGCCATCTTCGAGCTGTTGGTGGGTG
CTTAGCCAGCAAGTGTGCGTAGCAGATCGTCCTGCACATCTGCTGGCTCG
GACAAGAATGTACTTCGAAGTATAGACGATGACAGCGTAGTTGTCTCTGA
TGTGTAGGACATTGTTATTTATTCCCTAGTTGCCCTGCACCAACTGCGCA
GTTGCGTGCAAAGCTGGGATTAATAGGGCAGACACAGCACTTGTCGGCAG
TGCTTAGTTCAACTTCACGTGCACCAGTTGTGAACTGCACCATTGCATCT
GCCACACTGTTCAACACTCAGGCTTCCATCTTGTGCTTGTGTTGCGTGAT
GCAGGGAGGTATACCATGATTGCTATACAGGAGGTACAGCGAGCGAGGAG
CAGAGCAGCGGAAGAAGCGGCTGCTGCAGCAGCGCAACCAAAGGAGCCGG
AACCGCCAGCAGCAGAAGCAGCAGCGGGTGAGCACGAAATAGTGCTAACT
GTGCTGGTCTTGGTGTCTGTTGTTCTGAGGTGTTTGCAGACACATTCCCG
GCCTCCTTAAGCAGCACAGAGAGCATCACATGGGAACGCAATCAGGATGC
AACTGGGAAGCCATGCCTTCTTGAGGTTGAGCAGTTGAGAGCTGTCAGGT
CTATGTAGCAGATTCTTCAACACCTCACAACACTCAATCAATTATCTTGC
AGTACCCCTTCTGATAATGAACTTAAAGATCTGATGTAATCTTGGGGCTT
TGAGCCACTTCCTACCATCGCCAAAGTCGCTGCTGCTGCCGCGGTGTATA
CCTCACCCGATCATTTTCATTGCTGTCATTGCTGAGCCCAAGCTGATGTT
GCATGTCAAGCGCCTACGTAGCGCTTCAGTGGTGCAAATTAGGCACAATG
GATGCTATAGCATCCCTATGCCAACGGCCACCATCGTGAAGCCCTGTGCG
TGTTGGCTGGCTGGTGTCGACACTTCAACTGCGCTCTCCATGTTGAATTG
ACGGACCACGTTGTGATCAGCGCGTGCAGCGCCTGGGAGAATGCAGATGC
GCGGCATGTGGTGGTTGTAGAACGGCCCGCATTCAGCACATTTTCGTACA
ACCTCAGCCTTGCGGACCTACGATGATTTCATTTGAGTGTGACTGTGATG
CAACTGCGCGCACCGCACGGCAAAGGCCGCGTCGTTGTGCTGCTGCAGTC
GCCGACATCATCGCCTTTTTGATGAATGCTCTCAACTCGGTGAACACACA
GCGCTGCAGGCCGCTTTCTGATACCACTAATGCACCCAAATTATCCCCTC
ACGATGCCTCTGGTACAGCCCCATTGACAGATCCATTCCACTGTGACACT
TTCACATCAACTGACGTTTTTGTCGCAACGCCCAACTTCTTCAGGGAGCG
CTGCTGCGCAAGCGGAGGCTCAGGCGAAGGGCGGCGCAGCGACTGCAAAG
AAGTCGCCTCTCAGCGGCTGGTTCCGCAACCCGCTGGAGAAGCGGTTTTA
TGACGGTGGTTTTGAGGAGACCATGACCAGGAGGGAAGCAGCGCTCATAC
TGGGAGTCCGCGAGAGCGCCTCACCTCAGAGGATCAAGGTGCGTCACAAA
GGATTCATGTACTTCAACTTGCAGTTGAAGCATGAGTTGAAGTTTTGACC
AGGGGGGAAGCAGCGCTCATAGTGGGAGTCCCAAAGAACGCCTCACCTCA
GAGGATTCAAGTGCGCAAATGTAGTTGAACCTTGAAGTTCAAGTACGAGT
TGAAGTTATGTTCAGCAGTGCGCTCACTAGTGGAGCTCTGCATAACATGC
GCCGCACGTGCTGCTGCTGTTGTCCTCAGTCATCTCGTTAAGCAATACCC
TCGTACCCTCAAAGTGCCCACAGTATACTAGTATCAGTCTCTCAAGTTTG
CTGCAAATCAGTCTGCTTGATCTCCTGTGCTTTGGCCAGTGCTCTCTCAT
CGCACTGCTACCAAGTATATGAGACAAGGATGGAGTGTTACTGCTATACT
TCTATATGTATATATGCCACTGCCATGTATTTTACATAATCAGCGGAGGG
TCATTGCTTTGAACCCGTTTCACACAATCTGGAAATGTTATTTGCTATGA
ACTCAGTGCTCGCGCCACGCGTATGCTTGTAGTGTACTTGAAGTTGTTGG
CTGGCCTGCTCGGTCTAGCCACATGGTACATCTACGACAACTTGACGCCA
CGCTCTACTTGAAGCCACAACATTCCACTAATTGCATGCACCCATGTTGC
CTGTTGTTACGTTCAGGATGCGCATCGCCGCATACTCATGCTCAACCACC
CCGATAGAGGCGGCAGCACGTACATGGCGGGCAAGATCAACGCTGCAAAG
GAGATCCTCCTTAAGGGGAAGGAATGACCACAGCATCATGTGTTTTGCAC
GCAATGCAATGCACAGCTGGCTGAGTACAGTCTCTGCAAATGGACCTTGA
CACAGCAATGCTGTTCTCAATGC
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Coding sequence (CDS) from alignment at Contig_71:451060..454882-

>mRNA_12416 ID=mRNA_12416|Name=jgi.p|Trimin1|87605|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=720bp|location=Sequence derived from alignment at Contig_71:451060..454882- (Tribonema minus UTEX_B_3156 )
ATGCTGACAGCGGTGGCCAGACGAGCAGCGGCTGCACATGGCGCGGTAGC
GGTGCGGCACCAGCCAGCCTTGGCGGTGGCGGCCCGAAGGTTGGTCTGCC
ACCAAAGGCGGCGAGAGCAGCAGGCGGAGCAGCAGCATCAGCAAGCTCTG
CGCCAGTTGTTCCGGAGCAGCTCTACGGACGGCAGCTCCGCCATGCAGCT
GCAGCAGAGAGGACTTCACAGCACACCAGCTCGGCGGGACAGCACAGCGC
TGGTGGTGGCGGGGCTTGGACTCACAGGAATTGCAGTTGCAGGGAGGTAT
ACCATGATTGCTATACAGGAGGTACAGCGAGCGAGGAGCAGAGCAGCGGA
AGAAGCGGCTGCTGCAGCAGCGCAACCAAAGGAGCCGGAACCGCCAGCAG
CAGAAGCAGCAGCGGGGAGCGCTGCTGCGCAAGCGGAGGCTCAGGCGAAG
GGCGGCGCAGCGACTGCAAAGAAGTCGCCTCTCAGCGGCTGGTTCCGCAA
CCCGCTGGAGAAGCGGTTTTATGACGGTGGTTTTGAGGAGACCATGACCA
GGAGGGAAGCAGCGCTCATACTGGGAGTCCGCGAGAGCGCCTCACCTCAG
AGGATCAAGGATGCGCATCGCCGCATACTCATGCTCAACCACCCCGATAG
AGGCGGCAGCACGTACATGGCGGGCAAGATCAACGCTGCAAAGGAGATCC
TCCTTAAGGGGAAGGAATGA
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