Trimin1|87605|CE87604_102 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|87605
Unique NameTrimin1|87605|CE87604_102
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length240
Homology
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A835YPD5_9STRA (Mitochondrial import inner membrane translocase TIM14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPD5_9STRA)

HSP 1 Score: 351 bits (901), Expect = 1.900e-120
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
Query:    1 MLTAVARRAAAAHGAVAVRHQPALAVAARRLVCHQRXXXXXXXXXXXXALRQLFRSSSTDGSSAMQLQQRGLHSTPARRDSTALVVAGLGLTGIAVAGRYTMIAIQEVQRARSRAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE 239
            MLTAVARRAAAAHGAVAVRHQPALAVAARRLVCHQRXXXXXXXXXXXXALRQLFRSSSTDGSSAMQLQQRGLHSTPARRDSTALVVAGLGLTGIAVAGRYTMIAIQEVQRARSRAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE
Sbjct:    1 MLTAVARRAAAAHGAVAVRHQPALAVAARRLVCHQRXXXXXXXXXXXXALRQLFRSSSTDGSSAMQLQQRGLHSTPARRDSTALVVAGLGLTGIAVAGRYTMIAIQEVQRARSRAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE 239          
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: D7FLD8_ECTSI (Mitochondrial import inner membrane translocase TIM14 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD8_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 1.130e-30
Identity = 92/176 (52.27%), Postives = 114/176 (64.77%), Query Frame = 0
Query:   64 AMQLQQRGLHSTPARRDSTALVVAGLGLTGIAVAGRYTMIAIQEVQRARSRAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE 239
            A+  Q R +H +  RR+ +++++ G G+   A+  RY ++  Q+ Q A     E           XXXXXXXXXXXXXXXXXXX              +G F     KR YDGGFEE MTR+EAALILGVRESA+ QRIKD+HRRILM+NHPD+GGS YMA KIN AKEILLKG++
Sbjct:   49 ALVSQARDIHVS--RRNESSVLITGAGIAVSAMVARYGLMEYQKYQAAHPEITEEADSGAAGDQTXXXXXXXXXXXXXXXXXXX-------------XAGGFFGAFGKRHYDGGFEEKMTRKEAALILGVRESATAQRIKDSHRRILMINHPDKGGSKYMAAKINEAKEILLKGRK 209          
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: K8Z3F4_NANGC (Chaperone-domain containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3F4_NANGC)

HSP 1 Score: 122 bits (306), Expect = 1.380e-30
Identity = 58/68 (85.29%), Postives = 64/68 (94.12%), Query Frame = 0
Query:  171 KRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 238
            KRFY+GGFE+ MTRREAALILGVRESASPQRIK+AHRRILMLNHPD GGSTY+A KIN AKE+LLKG+
Sbjct:  162 KRFYEGGFEDKMTRREAALILGVRESASPQRIKEAHRRILMLNHPDTGGSTYLASKINEAKELLLKGR 229          
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A7S3DS72_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DS72_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.650e-29
Identity = 55/89 (61.80%), Postives = 72/89 (80.90%), Query Frame = 0
Query:  150 KGGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 238
            K  A+ ++++    WF   +  ++Y+GGFE++MTRREAALILGVRES+   RIKDAHR++L+LNHPD GGSTYMAGKIN AKE+L+KGK
Sbjct:  106 KESASGSRENVFKEWFGVGVGSKYYEGGFEDSMTRREAALILGVRESSPASRIKDAHRKLLILNHPDTGGSTYMAGKINEAKELLMKGK 194          
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A1Z5KKT5_FISSO (DnaJ homolog subfamily C member 19 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKT5_FISSO)

HSP 1 Score: 119 bits (297), Expect = 2.690e-29
Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 0
Query:  164 WFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 238
            WF   +  ++Y+GGFEE MTRREAALILGVRES+SP RIK+AHR++L+LNHPD GGSTY+AGK+N AKE+LLKGK
Sbjct:  150 WFGASVGAKYYEGGFEEEMTRREAALILGVRESSSPARIKEAHRKLLVLNHPDTGGSTYIAGKLNEAKELLLKGK 224          
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A6U3QJ97_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QJ97_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.380e-28
Identity = 52/76 (68.42%), Postives = 69/76 (90.79%), Query Frame = 0
Query:  164 WFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE 239
            +F   +  ++Y+GGFE+TMT+REAALILGVRES++P+RIKDAHR++L+LNHPD GGSTY++GKIN AKE+LLKGK+
Sbjct:  161 FFNMGVGSKYYEGGFEDTMTKREAALILGVRESSTPKRIKDAHRKLLILNHPDTGGSTYLSGKINEAKELLLKGKK 236          
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A7S3LBB7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBB7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.480e-28
Identity = 54/75 (72.00%), Postives = 65/75 (86.67%), Query Frame = 0
Query:  164 WFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 238
            WF   +  ++Y+GGFEE MTRREAALILGVRES+S  RIKDAHR++L+LNHPD GGSTY+AGK+N AKE+LLKGK
Sbjct:  150 WFGVGVGAKYYEGGFEEQMTRREAALILGVRESSSTSRIKDAHRKLLILNHPDTGGSTYIAGKLNEAKELLLKGK 224          
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A1E7FWH1_9STRA (J domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWH1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 6.390e-28
Identity = 54/75 (72.00%), Postives = 66/75 (88.00%), Query Frame = 0
Query:  164 WFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 238
            WF   +  ++YDGGFE+TMTRREAALILGVRES+SP R+KDAHR +L+LNHPD GGST++AGK+N AKE+LLKGK
Sbjct:  229 WF--DVGTKYYDGGFEDTMTRREAALILGVRESSSPARVKDAHRNLLILNHPDTGGSTFLAGKLNEAKELLLKGK 301          
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A7S2JUU2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUU2_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.030e-27
Identity = 54/68 (79.41%), Postives = 63/68 (92.65%), Query Frame = 0
Query:  172 RFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE 239
            ++Y+GGFE+ MTRREAALILGVRESA+ +RIKDAHR+IL+LNHPD GGSTYMA KIN AKE+LLKGKE
Sbjct:  169 KYYEGGFEDKMTRREAALILGVRESATVKRIKDAHRKILILNHPDTGGSTYMASKINEAKELLLKGKE 236          
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Match: A0A7S3K0B7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0B7_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.040e-27
Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = 0
Query:  165 FRNPLEKRFYDGGFEETMTRREAALILGVRESASPQRIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGK 238
            F N   +RFYDG FE  MTRREAALILGVRESA+ +RIK+AHRRIL +NHPD GGST++AGK+N AKE+L+KG+
Sbjct:   68 FTNFFARRFYDGPFEAKMTRREAALILGVRESANSERIKEAHRRILRINHPDMGGSTFLAGKVNEAKELLMKGR 141          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|87605 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YPD5_9STRA1.900e-120100.00Mitochondrial import inner membrane translocase TI... [more]
D7FLD8_ECTSI1.130e-3052.27Mitochondrial import inner membrane translocase TI... [more]
K8Z3F4_NANGC1.380e-3085.29Chaperone-domain containing protein n=1 Tax=Nannoc... [more]
A0A7S3DS72_9STRA1.650e-2961.80Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A1Z5KKT5_FISSO2.690e-2972.00DnaJ homolog subfamily C member 19 n=2 Tax=Fistuli... [more]
A0A6U3QJ97_9STRA1.380e-2868.42Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3LBB7_9STRA1.480e-2872.00Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1E7FWH1_9STRA6.390e-2872.00J domain-containing protein n=1 Tax=Fragilariopsis... [more]
A0A7S2JUU2_9STRA1.030e-2779.41Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3K0B7_9STRA1.040e-2770.27Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..154
NoneNo IPR availablePANTHERPTHR12763:SF28GEO10507P1-RELATEDcoord: 65..238
NoneNo IPR availablePANTHERPTHR12763UNCHARACTERIZEDcoord: 65..238
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 185..239
e-value: 5.9E-8
score: 42.4
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 186..239
score: 9.433582
IPR001623DnaJ domainCDDcd06257DnaJcoord: 190..234
e-value: 1.6149E-8
score: 47.9253
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 172..238
e-value: 1.7E-26
score: 93.8
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 176..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_71contigContig_71:451156..454809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|87605mRNA_12416Tribonema minus UTEX_B_3156 mRNAContig_71 451060..454882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|87605|CE87604_102 ID=Trimin1|87605|CE87604_102|Name=jgi.p|Trimin1|87605|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=240bp
MLTAVARRAAAAHGAVAVRHQPALAVAARRLVCHQRRREQQAEQQHQQAL
RQLFRSSSTDGSSAMQLQQRGLHSTPARRDSTALVVAGLGLTGIAVAGRY
TMIAIQEVQRARSRAAEEAAAAAAQPKEPEPPAAEAAAGSAAAQAEAQAK
GGAATAKKSPLSGWFRNPLEKRFYDGGFEETMTRREAALILGVRESASPQ
RIKDAHRRILMLNHPDRGGSTYMAGKINAAKEILLKGKE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR036869J_dom_sf