mRNA_12230 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351732
Unique Name	mRNA_12230
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351732 vs. uniprot
Match: A0A835YQY8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQY8_9STRA)

HSP 1 Score: 830 bits (2144), Expect = 1.190e-298
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 1

Query:    1 MRPATVGEEAPIQPGQEVDASHFEQRAALPDLWQVKCLAEAVSIYRHVERAIEDRKDKLVRRGDYDEVKELEVALDGMRTEFXXXXXXXXXXXXXXXXXXXXQLRGQAEERDRQRAAYVMXXXXXXXXXXXXXXSAASARVLRAATADAAHELSAVTEACARAERDAAHAHDIERDNLELRIGWAPPPRVKYSRAFLELQHGVAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKEEAAHAHRCARAVDARRRDLDTTQAEXXXXXXXXXXXXXXXXXXXXXWARLGQGLREARLSAQREARAALAVTRARLDHVASDMAHAHAMIALKKPELAARPSALWRERAHHAATASAAHGDHLADRVKGRRRGDAVAVASLARVHDFGDGGSGGAAALSGTVTLHRALAGAPRSSSTRRTRADGGNSAVTAARGGWMTLCISVMCRVLHPGVANTTVMAPPLLLLPLLLLAGAVACSGPAAQRQHCWLGAVAAAAVVLEAATALALPRIEASWMCSQHRCLRWPSLSRSRCCCFEGRRTAAARPAAGAA 1710
            MRPATVGEEAPIQPGQEVDASHFEQRAALPDLWQVKCLAEAVSIYRHVERAIEDRKDKLVRRGDYDEVKELEVALDGMRTEFXXXXXXXXXXXXXXXXXXXXQLRGQAEERDRQRAAYVMXXXXXXXXXXXXXXSAASARVLRAATADAAHELSAVTEACARAERDAAHAHDIERDNLELRIGWAPPPRVKYSRAFLELQHGVAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKEEAAHAHRCARAVDARRRDLDTTQAEXXXXXXXXXXXXXXXXXXXXXWARLGQGLREARLSAQREARAALAVTRARLDHVASDMAHAHAMIALKKPELAARPSALWRERAHHAATASAAHGDHLADRVKGRRRGDAVAVASLARVHDFGDGGSGGAAALSGTVTLHRALAGAPRSSSTRRTRADGGNSAVTAARGGWMTLCISVMCRVLHPGVANTTVMAPPLLLLPLLLLAGAVACSGPAAQRQHCWLGAVAAAAVVLEAATALALPRIEASWMCSQHRCLRWPSLSRSRCCCFEGRRTAAARPAAGAA
Sbjct:    1 MRPATVGEEAPIQPGQEVDASHFEQRAALPDLWQVKCLAEAVSIYRHVERAIEDRKDKLVRRGDYDEVKELEVALDGMRTEFXXXXXXXXXXXXXXXXXXXXQLRGQAEERDRQRAAYVMXXXXXXXXXXXXXXSAASARVLRAATADAAHELSAVTEACARAERDAAHAHDIERDNLELRIGWAPPPRVKYSRAFLELQHGVAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKEEAAHAHRCARAVDARRRDLDTTQAEXXXXXXXXXXXXXXXXXXXXXWARLGQGLREARLSAQREARAALAVTRARLDHVASDMAHAHAMIALKKPELAARPSALWRERAHHAATASAAHGDHLADRVKGRRRGDAVAVASLARVHDFGDGGSGGAAALSGTVTLHRALAGAPRSSSTRRTRADGGNSAVTAARGGWMTLCISVMCRVLHPGVANTTVMAPPLLLLPLLLLAGAVACSGPAAQRQHCWLGAVAAAAVVLEAATALALPRIEASWMCSQHRCLRWPSLSRSRCCCFEGRRTAAARPAAGAA 570

[Close]

BLAST of jgi.p|Trimin1|351732 vs. uniprot
Match: A0A7S2GWW2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GWW2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.080e-5
Identity = 34/90 (37.78%), Postives = 52/90 (57.78%), Query Frame = 1

Query: 1006 RLDHVASDMAHAHAMIALKKPELAARPSALWRERAHHAATASAAHGDHLADRVKGRRRGDAVAVASLARVHDFGDGGSGGAAALSGTVTL 1275
            R+ ++  DM HAH ++  K+PE+   PSA W++R  H  +++   G HL D  KG+++  AV VASL   H+F        A L GT+T+
Sbjct:  274 RITNMRRDMDHAHHLVLQKQPEMNTEPSAHWQDRPSHQESSAHFRGRHLHDACKGKKKDQAVYVASLCDNHEFD-------APLEGTMTI 356

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351732 vs. uniprot

BLAST of jgi.p|Trimin1|351732 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YQY8_9STRA	1.190e-298	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2GWW2_9STRA	2.080e-5	37.78	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_99	contig	Contig_99:39712..47035 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351732\|estExt_Genemark1.C_Ctg_990006
Hectar predicted targeting category	other localisation
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-06_004560.1
TranscriptId	352054
Track	FilteredModels1
ProteinId	351732

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351732	gene_12230	Tribonema minus UTEX_B_3156	gene	Contig_99 39712..47035 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_12230_12	exon_12230_12	Tribonema minus UTEX_B_3156	exon	Contig_99 39712..40156 -
exon_12230_11	exon_12230_11	Tribonema minus UTEX_B_3156	exon	Contig_99 40286..40513 -
exon_12230_10	exon_12230_10	Tribonema minus UTEX_B_3156	exon	Contig_99 41020..41157 -
exon_12230_9	exon_12230_9	Tribonema minus UTEX_B_3156	exon	Contig_99 41796..41855 -
exon_12230_8	exon_12230_8	Tribonema minus UTEX_B_3156	exon	Contig_99 42264..42427 -
exon_12230_7	exon_12230_7	Tribonema minus UTEX_B_3156	exon	Contig_99 42725..42772 -
exon_12230_6	exon_12230_6	Tribonema minus UTEX_B_3156	exon	Contig_99 43371..43418 -
exon_12230_5	exon_12230_5	Tribonema minus UTEX_B_3156	exon	Contig_99 43568..43813 -
exon_12230_4	exon_12230_4	Tribonema minus UTEX_B_3156	exon	Contig_99 43946..43993 -
exon_12230_3	exon_12230_3	Tribonema minus UTEX_B_3156	exon	Contig_99 45768..45818 -
exon_12230_2	exon_12230_2	Tribonema minus UTEX_B_3156	exon	Contig_99 45919..46053 -
exon_12230_1	exon_12230_1	Tribonema minus UTEX_B_3156	exon	Contig_99 46913..47035 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_12230	UTR3_12230	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_99 39712..39732 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_12230	CDS_12230	Tribonema minus UTEX_B_3156	CDS	Contig_99 46913..47035 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351732	Trimin1\|351732\|estExt_Genemark1.C_Ctg_990006	Tribonema minus UTEX_B_3156	polypeptide	Contig_99 39733..47035 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_99:39712..47035-
coding sequence from alignment at Contig_99:39712..47035-

spliced messenger RNA

>mRNA_12230 ID=mRNA_12230|Name=jgi.p|Trimin1|351732|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1734bp|location=Sequence derived from alignment at Contig_99:39712..47035- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGCCCGCTACCGTTGGTGAGGAGGCGCCTATTCAACCTGGCCAGGA
AGTTGACGCCAGTCACTTCGAGCAACGAGCAGCGCTCCCTGACTTGTGGC
AGGTCAAGTGCCTGGCGGAGGCGGTGTCCATATACCGCCACGTGGAGCGC
GCGATCGAGGACAGGAAGGACAAGCTGGTGCGGCGCGGCGACTATGACGA
GGTCAAAGAGCTGGAGGTCGCACTTGACGGCATGCGCACCGAGTTCCAGC
AGTTACAGGGGCTGGAGGTCAAGCTCGACGGCATGCGCAAAGCGTTCCAA
CCGCTGCAGCTGCGCGGCCAGGCGGAGGAGCGCGACCGCCAGAGGGCGGC
GTACGTGATGCGCGACCAGGCAGAAGAGCGCGAACGCCAGAGGGCCGCAT
ATTCAGCGGCAAGCGCGCGCGTGCTGCGCGCGGCGACGGCGGACGCGGCG
CACGAGCTGAGCGCTGTCACGGAGGCGTGCGCGCGCGCGGAGCGCGACGC
CGCGCACGCGCACGACATCGAGCGCGACAACCTGGAGCTGCGCATCGGCT
GGGCGCCGCCGCCGCGCGTCAAGTACAGCCGCGCATTCCTGGAGCTGCAG
CACGGTGTGGCAGGTATCAAGTACAGCCGCGCGTTCCTGGAGCTGCAGCA
CGCAGAGAAGAGCCTCGTGAAGCTGCGTCAGTACAACGAGGCGCAGCTCG
CAGAGAAGAGCCTCGTGAAGTTGCGTCAGTACCACGAGGCGCAGCTCGTG
CGGCGCGCACTGGACAAGCGCAGGCCCAAGGAGGAGGCGGCGCACGCGCA
CAGGTGCGCGCGCGCGGTCGACGCGCGGCGCCGCGACCTCGATACCACGC
AGGCGGAGGAACGGTGTGCGCGCGCGAACGACGCGCGGCGCCGCGACCTC
GCGACGACGCAGGCGGAGGAATGGGCGCGGCTAGGGCAGGGGCTGCGCGA
GGCTCGCCTCAGTGCTCAGCGCGAGGCGCGCGCGGCGCTCGCCGTGACGC
GCGCGCGGCTCGACCACGTCGCCTCCGACATGGCGCACGCGCACGCCATG
ATCGCCCTCAAAAAGCCGGAGCTCGCCGCGCGCCCGTCCGCGCTGTGGCG
CGAGCGCGCGCACCACGCCGCGACGGCGAGCGCCGCGCACGGCGACCACC
TCGCGGACCGCGTCAAGGGGCGGCGCCGCGGCGACGCCGTCGCCGTCGCG
TCGCTCGCGCGCGTCCACGACTTTGGCGATGGCGGCAGCGGCGGCGCGGC
GGCGCTGAGCGGCACCGTGACGCTCCACCGCGCTCTGGCAGGCGCACCCC
GCAGCAGCAGCACGCGGCGGACACGCGCCGATGGCGGCAATTCCGCGGTC
ACGGCGGCGCGCGGCGGCTGGATGACGCTGTGCATCAGCGTCATGTGCCG
CGTGTTGCACCCAGGGGTCGCCAACACGACGGTCATGGCGCCACCGCTGC
TGCTGCTGCCGCTGCTGCTGTTGGCGGGCGCCGTCGCCTGCAGCGGACCG
GCTGCGCAGCGCCAACATTGCTGGCTTGGTGCGGTGGCGGCCGCTGCGGT
GGTGCTGGAAGCTGCGACGGCGCTGGCGCTGCCGCGCATTGAAGCATCAT
GGATGTGCTCTCAGCACCGGTGCCTCCGGTGGCCCTCGTTGAGCCGCAGC
CGCTGCTGCTGCTTTGAGGGCCGCAGAACGGCAGCTGCGCGCCCTGCTGC
TGGTGCCGCTTGATGCAGGGCGCTCATATGTCGA

protein sequence of jgi.p|Trimin1|351732

>Trimin1|351732|estExt_Genemark1.C_Ctg_990006 ID=Trimin1|351732|estExt_Genemark1.C_Ctg_990006|Name=jgi.p|Trimin1|351732|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=571bp
MRPATVGEEAPIQPGQEVDASHFEQRAALPDLWQVKCLAEAVSIYRHVER
AIEDRKDKLVRRGDYDEVKELEVALDGMRTEFQQLQGLEVKLDGMRKAFQ
PLQLRGQAEERDRQRAAYVMRDQAEERERQRAAYSAASARVLRAATADAA
HELSAVTEACARAERDAAHAHDIERDNLELRIGWAPPPRVKYSRAFLELQ
HGVAGIKYSRAFLELQHAEKSLVKLRQYNEAQLAEKSLVKLRQYHEAQLV
RRALDKRRPKEEAAHAHRCARAVDARRRDLDTTQAEERCARANDARRRDL
ATTQAEEWARLGQGLREARLSAQREARAALAVTRARLDHVASDMAHAHAM
IALKKPELAARPSALWRERAHHAATASAAHGDHLADRVKGRRRGDAVAVA
SLARVHDFGDGGSGGAAALSGTVTLHRALAGAPRSSSTRRTRADGGNSAV
TAARGGWMTLCISVMCRVLHPGVANTTVMAPPLLLLPLLLLAGAVACSGP
AAQRQHCWLGAVAAAAVVLEAATALALPRIEASWMCSQHRCLRWPSLSRS
RCCCFEGRRTAAARPAAGAA*

mRNA from alignment at Contig_99:39712..47035-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_12230 ID=mRNA_12230|Name=jgi.p|Trimin1|351732|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7324bp|location=Sequence derived from alignment at Contig_99:39712..47035- (Tribonema minus UTEX_B_3156 )
ATGAGGCCCGCTACCGTTGGTGAGGAGGCGCCTATTCAACCTGGCCAGGA
AGTTGACGCCAGTCACTTCGAGCAACGAGCAGCGCTCCCTGACTTGTGGC
AGGTCAAGTGCCTGGCGGAGGCGGTGGCGAAGTATGGTTTCAGTCCGCGT
GATCATATACCCAGACGAGAGCAGGTGAGGTCTAGCTGGAACATCCGATG
TCGCTACCAGTGCTATGCAATCGCCACCGGCGCAACGCACACATGCCGCA
CAAACAAGGCAGAATGAGGTCACGATCAGAGGCAGCACCGGCTCACACTG
GGTGCGAGGACCCATGCACGCGCCGCCTCACTCGTCGCTGCGGAGTCGCC
AACATGAATATGCAGAGTTAGCTTCTTATGCATAAGTAATGGGCGCCAGA
GAGGTGAACAGACACGCAGTAGCTCATGGCATCAGCTTACCGGCTGTGGC
AACAAGGTGTAATGGCAATCGCTGCTTCAGCGCCTGCAGGCGTGTGCACC
TGCATTACGCCAACAACAAAGATAATCCTGGCCGAGCCATTGCTGTCAAC
TGGAAGATTCCGGCTCTTGCTTGCACATGTGTCATGAGGCCAAACATCCC
CAGTCAAAGGGTGAGCGGGTGTGGTCTGGACAGCCGCGCACAAGCATCCG
CATAATGCTTCCCTGCATATACTATAAGCTACATTCGCATACCAATACAC
TGCATCTTGCAAGGTGCTGACACCACGCTGTCGACCGAGAAAACCCAGCC
AGTTTGTCATCAAACTCACCTCAGCAAACACTTTTTGAAACATACAAAGT
GGCCGGCCCAGCGTGTGCGCCCGCAGACACATCCTTAACTGCGCACTTGT
GGGGCTGACAAGGCCTTGAACGCGAGTTCAGTTCCTACGGGAAGCACAAT
GAGAACTGTCAAAAACAACTAGTCTCAGCAACCTGTGAAAGATTTGTCTT
GATAGGCATGGCGCCACTGTCCGCGATCGCAGGTGTCCATATACCGCCAC
GTGGAGCGCGCGATCGAGGACAGGAAGGACAAGCTGGTGCGGCGCGGCGA
CTATGACGAGGTCAAAGAGCTGGAGGTCGCACTTGACGGCATGCGCACCG
AGTTCCAGCAGTTACAGGTGATGAAACTGCGGCATACGCAGGGGAGGGCA
AACCCTGTGCAGTGTGTGCGCTCTGCCAAGCCCTGGTATGCTAGCAACCA
CACTATGACGAGGTCAGGGGCTGGAGGTCAAGCTCGACGGCATGCGCAAA
GCGTTCCAACCGCTGCAGGTGATGAAACTACCGTTTTTTTTGGGGGGGGG
GGGGGGGGCTACGCTTTCCGTGTGGGGCACACGCTCAATCAGCTTCGGAG
GCGTGTTCATGCAGCAGTGTTGTCTGGAATGGCATCAGAACTGGGCATGC
GTGCCGAGTTCCAACAGTTACAGGTATTAAAACTACCGCACAAATGGGGG
AGGGGGGGCTCTTTTGCGTGCAGGGGGCACGCGATCAACAGCTTTGGAAA
GTGTTCCCTCAACCTTGATCTGGAACACCATCTTGAAAGGGCTTGTGCAT
GCGCAGCTGCAGGCAGTCCCTTTGTGCCCCCCTCCCCCCCCCCCCCCCCG
TGCCACACCCCTTAAGCCTCAGAGCAGCACCTGCTCTGCTGGTGACAGCC
GAACGGTGCAAGTGCCGTGCCGTGCTTTTGACGGTGCGAGCTGCGCGCTG
CAGCGGCGGTCGCGCTGAGCACTGCTTGGCAGTTCACCCCCCTACTCCCC
TATAATGCCTTCACGCCCATACGGCAGGCACCCTTGTGCTCCAAGAGGTC
ACGCGCACCGCTACCACTGGAGCTGCTGCGAGCTCACGCGCAGCACCGGA
CCATCCTGGCTGCGCCGCACGGCCTTCTGCATGCCAAGCACTGGCCATGC
TGATGACGCTCAGCGTATTCTATGTGCAACTGCCTGAGCACGTGAAAGTC
TGCGCGCCACCGGAGCAAGCCGCACAGCTTAGGGTTAGGGTTAGAGTTAG
GCTTAGGGTTACAGACACTGATGGCGCTTGCACATGGCAGCACAGATTGG
CGCCGGTGCATGTGTAATGATCACAGCATCTAGCCTCTGAGCGGTAGCGG
TGTTACCGCATCTGGCCGCGGCGTGCAACGCGCTGATGCGCAGCGTGCAA
CTTCAACAAGGCCCGGTAGTACATCACGAACTTACCTGTCGTACTCGAGG
GCTGATGCGACGCTTGAGCCCCATCGCGCCGCAAGGGTACACTGCACAGT
CTGTGACTGTCACAGACTGTGCAGGGCAGCACTCAAAGCGCCTGATGGCC
GTCCGGAGCACTCAGATCCAAAGCTAGTCTCAACCCTAGCCCAAAGCTAG
TCTCAATTTAGGCCTAGTAAGCGACACACCCGCTACTTCATGCAGTGCCC
TTGTCGTGGCGCGCGCAGGTAGCTCCACCCACTTGTAATCGTGATTGTAA
CGCTATGCGTGACCGCCCCAAACCCTGAAATGCCGATTTTCACCCTCGCG
CTCTGACCTGCACACAAAGCCGCCGCTGCTTCAACCACACAGCATGCGCG
GCGGCGACCCTAGCCATAGCCCTAACCCTAACATCGTCAACCTAGCCCTA
ACCCTTGTCCTGACCCTAACACCATTACCCCAACCGCAACCCTGCGCGTG
GCACGCGCGCCCTGCAGATGCGCAACCAGGCGGAGGAGCGCGACCGCCAG
AGGGCGGCGTGCGCGGCGCCGACCCTAAACCTAAACAGTATTTTACCCCT
AACCCTAACCCTAACCCCAACCCCAATGCCGTCACCACCTGACCGCAAAC
CTGCGCATGGCGTGTGCTAAACCCTGGACCCACTAGTGATTGTGATATAA
ACGCAATGCATGGTGCGCGCTCCGCAGATGTGCGACCAGGCGGAGGAGCG
CGAGCGCCAGAGGGCCGCGTGCGCGGCGGCGACCCTAACCCTGACCCTAA
CCCTCACCGTAATCCTGCGCATGGTGCACGCTAAACCCCAGACCTAGTAC
TTGTAACTATAGTTTCAACGCTACGCATGGTGTGCGCCGCAGCTGCGCGG
CCAGGCGGAGGAGCGCGACCGCCAGAGGGCGGCGTACGTGGTGGCGATTC
TAACCCTACTTGTAACCCTAGCCCTAATCCCCTTCTCGTAACCCTAATCC
TCACCCTAATACCGTTACACTAACGCCGTTGCGCTAATCGTAACCGCTGC
GTACGGCGCGCGCACTCCGCAGATGCGCGACCAGGCAGAAGAGCGCGAAC
GCCAGAGGGCCGCATATTCAGCGGCAAGCGCGCGCGTGCTGCGCGCGGCG
ACGGCGGACGCGGCGCACGAGCTGAGCGCTGTCACGGAGGCGTGCGCGCG
CGCGGAGCGCGACGCCGCGCACGCGCACGACATCGAGCGCGACAACCTGG
AGCTGCGCATCGGCTGGGCGCCGCCGCCGCGCGTCAAGTACAGCCGCGCA
TTCCTGGAGCTGCAGCACGTGAGTTGCGAATCGGAGTCGCTAATGGTGAT
TGAGACCCCTCTAGCTGCAGCCCTCGAGATATGAGGTGCGGAGCGGGTGT
TGCGGAGTATGACGGCAACGCCCAATATGCCAAGTGCCGCATATGCGCAT
TGTATACAGCTGCACAGGGTGTGGCAGGTATCAAGTACAGCCGCGCGTTC
CTGGAGCTGCAGCACGTGAGTCGCGAGTCGGAGTTGCGGGGCATGCTGAT
GATAATTCAGACCCCAAGTAGTCGTGAGATGCCAGGAGGGTGTTGCAGAG
ACCGGGCACGGCGCCACCGGTGCGCGATGGACACAGCTGCGCAAGTTGAG
GTTTTCAGCAGTACATTGCTGGAGCTGCAGCACGTAAGTCGCGAGTCAGA
GTCATGGGCACAGATTCGTGTGAGGCGCCGTGACGGTGCAGAATGCGGCA
GCGACACAAGCCATACTTTCAATTCTGTTCTCTCACACCCCTCGCCCTAG
CCCGTGTTCCAATATACACGATCGCCCCTTCGGGCAGCGAAGAGCCTGAT
AAAGCTGCCGCAGTACCACAAGGCCTGACCCTAGCGAACCCTAGTCTCAA
CCCTTAATGCTCACCTCAGCCTAACCCTCATTGCAACCCTCACAGGCAGA
GAAGAGCCTGGTGAAGCTGAGGCAGTACCACGAGGCCTTGTCCTACTGCA
CCCCAACCTTAACCCTGACCCAAACCCTAAAACTAATTGTAAACCACTCA
TCCTCCTGAACCGTAACCCTAATCCTTACCCAAACCCTAATTCTAACCCT
TACCCAAACGCAGGCAGAGAAGAGCCTCGTGAAGCTGCGTCAGTACAACG
AGGCGCAGCTCGTGCGGCGCGCGCTGGACAAGCGCGGGCCCAAGTTTTAA
CGTCCAACCTCACCTCAATTGCCACCTTTGCAGGCAGAGAAGAGCCTGTG
AACCTGCGGCAGTACCATGAGGCCTCATCCTCCTGGACCCCAACTTCAAC
CCTTACCCAAACCCTAACCCTGAATGCAACCCTCACAGGCAGAGAAGAGC
TAGGTGAAGCTCCGGCAGTAGCACGAGCCTCGTCATCCTGAATCCTACCC
CTATCCCGAAGCCGCCTAAACCTTACCCAAACCCTAACCCTGGTTGCAAC
CCACACAGGCAGAGAAGAGCCTCGTGAAGTTGCGTCAGTACCACGAGGCG
CAGCTCGTGCGGCGCGCACTGGACAAGCGCAGGCCCAAGGAGGAGGCGGC
GCACGCGCACAGGTGCGCGCGCGCGGTCGACGCGCGGCGCCGCGACCTCG
ATACCACGCAGGCGGAGGAACGGTGAGCACGCACAGCAGCGCCTCTGTAT
GCACTCTGATGCTTTATTGCTGTAGAATACAACGCACACATGTGCGTACA
TATGTATGTATGCTTCAACAAGTGCGCGCGCGCGGTCGACGCGCGGCGCT
GCGACCTCGATACCAAGCAGGCGGAGGAACGGTGAGCGCGCACGGACAGC
GCCTCTGTGTGCTGTTATAATTCATTGCTGTAGAGCAGTATGCATGCATG
TACATGCGCCATTTGGCGGCGGCGGCGTTTGAGTGGTTGTCGTTGAGACA
CTTTCAGACTGTCACGCGACATGTAGATTCCGTACTGCCATTCATCTGGG
CTTTTTCGCGCCCTGAGCGAGAACTAATAAAAAGTACATACGCACATATA
TGAACGCGCAAAGAGGAGCAGCTGCAACAGGTGTGCGCGCGCGAACGACG
CGCGGCGCCGCGACCTCGCGACGACGCAGGCGGAGGAATGGTAGGCACTC
GGCGCGGGGCGGCGTTTCTGCGCAATCTGCTTCTGCTGCCGAAGCGGTGT
GTACGTGCGCCACACACGGTACATGATCAGGCATGCAGCCGACGTGATTA
CTGCACTGATGCGCTGTGACGTATAAGGGTGAAGGTCTGGTGGTGCCACT
GCGCTTGCATGCAGGGCACGACTCGGCTCGGCAACTGCTCTGCATCTGCT
GCTCACATCACCACAGGAGGGTTTGCACCCGCTCAAGCCGCACCAGATAC
AACTAACGCTGGTGGTGACAGTGGAAGCTGCGGTATTGCTATGCGCGCAC
GTGGTGTGCCGCATCTGCAGGCGCTGCGCATGAGTACAACAAGGTGTCCC
GCCCTCAAGCTGCAGTAACTATCCAAGCAACATCATACTAACAGTAAAAG
CCACTGCCCGCTGCCACGTGTGCGCGCAGGGCGCGACTCGGACAGGGGCT
GCGCATCAGTACTAATAAGGTGTCCGCCCCTCAAGCGGCTGTCACCATCG
ATCAACAATATACTTTTGGTGGAAGGCGCTTGCGGCTAACCACCCCTTGT
CACCTAGAGCTCTATGATCTTTGGATTCGTTTTGATACTAACAGCGGAAG
GTGCTGGTGCTGTCACGTGTGCGCGCAGGGCGCGGCTAGGGCAGGGGCTG
CGCGAGGCTCGCCTCAGTGCTCAGCGCGAGGCGCGCGCGGCGCTCGCCGT
GACGCGCGCGCGGCTCGACCACGTCGCCTCCGACATGGCGCACGCGCACG
CCATGATCGCCCTCAAGTGAGTCCCAACACAAAAGTACCATCTCTTCAAG
CTTGCAAACTCCGATACTTCATGGTATGCGCATGAGGGTATTCGCTTGAT
GTCATTACGGCAGCGAACGGCACACGGAGAAGGCGTGGGAAGGCGCGCTG
ACATACCAGATGCGCAAATTGAAAGCCCAACTCATCAAATATAGCCCTAA
CACATACTTCTACATTGCTTGCTCTTGGCACGAACAAGCCAGCGACAGGC
GCTGGCGCATGCACACGCGGGAGCCCGCAGCAGCAGCAGCGCCAACCGCG
CACCAGCATCGAAACGACACGCCAGCAGCGGCAGCAGCAGCCCGTCACAC
ACAGCACAGCGTGAACTTGGCGTTCAAATTCGCAACCTCTTCATTAGCAC
AACTTCACACCAATCACGGCATCCCATCCCCATCCCCCTCCCCCCCCCCG
GGGCCCCCCGCCCCCTCGTCTCATCGCGCACAAATCAGAGCTCGCCGCGC
GCCCATCCGTCTCGTCACACAGAAAGCCGGAGCTCGCCGCGCGCCCGTCC
GCGCTGTGGCGCGAGCGCGCGCACCACGCCGCGACGGCGAGCGCCGCGCA
CGGCGACCACCTCGCGGACCGCGTCAAGGGGCGGCGCCGCGGCGACGCCG
TCGCCGTCGCGTCGCTCGCGCGCGTCCACGACTTTGGCGATGGCGGCAGC
GGCGGCGCGGCGGCGCTGAGCGGCACCGTGACGCTCCACCGCGCTCTGGC
GTAGGGGGCGCGCGGCGGCGGCAGCAGCGGCGGCGGCGCGGGCGGACGCA
TGTGATGTTGTGGCGGTGGCGGCGCTGCGGCTGCGCCAAACGGCACCGCT
GCGCGGCGCTTCGCGCCCCGCCGCAGCAGAGGCGCACCCCGCAGCAGCAG
CACGCGGCGGACACGCGCCGATGGCGGCAATTCCGCGGTCACGGCGGCGC
GCGGCGGCTGGATGACGCTGTGCATCAGCGTCATGTGCCGCGTGTTGCAC
CCAGGGGTCGCCAACACGACGGTCATGGCGCCACCGCTGCTGCTGCTGCC
GCTGCTGCTGTTGGCGGGCGCCGTCGCCTGCAGCGGACCGGCTGCGCAGC
GCCAACATTGCTGGCTTGGTGCGGTGGCGGCCGCTGCGGTGGTGCTGGAA
GCTGCGACGGCGCTGGCGCTGCCGCGCATTGAAGCATCATGGATGTGCTC
TCAGCACCGGTGCCTCCGGTGGCCCTCGTTGAGCCGCAGCCGCTGCTGCT
GCTTTGAGGGCCGCAGAACGGCAGCTGCGCGCCCTGCTGCTGGTGCCGCT
TGATGCAGGGCGCTCATATGTCGA

Coding sequence (CDS) from alignment at Contig_99:39712..47035-

>mRNA_12230 ID=mRNA_12230|Name=jgi.p|Trimin1|351732|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1713bp|location=Sequence derived from alignment at Contig_99:39712..47035- (Tribonema minus UTEX_B_3156 )
ATGAGGCCCGCTACCGTTGGTGAGGAGGCGCCTATTCAACCTGGCCAGGA
AGTTGACGCCAGTCACTTCGAGCAACGAGCAGCGCTCCCTGACTTGTGGC
AGGTCAAGTGCCTGGCGGAGGCGGTGTCCATATACCGCCACGTGGAGCGC
GCGATCGAGGACAGGAAGGACAAGCTGGTGCGGCGCGGCGACTATGACGA
GGTCAAAGAGCTGGAGGTCGCACTTGACGGCATGCGCACCGAGTTCCAGC
AGTTACAGGGGCTGGAGGTCAAGCTCGACGGCATGCGCAAAGCGTTCCAA
CCGCTGCAGCTGCGCGGCCAGGCGGAGGAGCGCGACCGCCAGAGGGCGGC
GTACGTGATGCGCGACCAGGCAGAAGAGCGCGAACGCCAGAGGGCCGCAT
ATTCAGCGGCAAGCGCGCGCGTGCTGCGCGCGGCGACGGCGGACGCGGCG
CACGAGCTGAGCGCTGTCACGGAGGCGTGCGCGCGCGCGGAGCGCGACGC
CGCGCACGCGCACGACATCGAGCGCGACAACCTGGAGCTGCGCATCGGCT
GGGCGCCGCCGCCGCGCGTCAAGTACAGCCGCGCATTCCTGGAGCTGCAG
CACGGTGTGGCAGGTATCAAGTACAGCCGCGCGTTCCTGGAGCTGCAGCA
CGCAGAGAAGAGCCTCGTGAAGCTGCGTCAGTACAACGAGGCGCAGCTCG
CAGAGAAGAGCCTCGTGAAGTTGCGTCAGTACCACGAGGCGCAGCTCGTG
CGGCGCGCACTGGACAAGCGCAGGCCCAAGGAGGAGGCGGCGCACGCGCA
CAGGTGCGCGCGCGCGGTCGACGCGCGGCGCCGCGACCTCGATACCACGC
AGGCGGAGGAACGGTGTGCGCGCGCGAACGACGCGCGGCGCCGCGACCTC
GCGACGACGCAGGCGGAGGAATGGGCGCGGCTAGGGCAGGGGCTGCGCGA
GGCTCGCCTCAGTGCTCAGCGCGAGGCGCGCGCGGCGCTCGCCGTGACGC
GCGCGCGGCTCGACCACGTCGCCTCCGACATGGCGCACGCGCACGCCATG
ATCGCCCTCAAAAAGCCGGAGCTCGCCGCGCGCCCGTCCGCGCTGTGGCG
CGAGCGCGCGCACCACGCCGCGACGGCGAGCGCCGCGCACGGCGACCACC
TCGCGGACCGCGTCAAGGGGCGGCGCCGCGGCGACGCCGTCGCCGTCGCG
TCGCTCGCGCGCGTCCACGACTTTGGCGATGGCGGCAGCGGCGGCGCGGC
GGCGCTGAGCGGCACCGTGACGCTCCACCGCGCTCTGGCAGGCGCACCCC
GCAGCAGCAGCACGCGGCGGACACGCGCCGATGGCGGCAATTCCGCGGTC
ACGGCGGCGCGCGGCGGCTGGATGACGCTGTGCATCAGCGTCATGTGCCG
CGTGTTGCACCCAGGGGTCGCCAACACGACGGTCATGGCGCCACCGCTGC
TGCTGCTGCCGCTGCTGCTGTTGGCGGGCGCCGTCGCCTGCAGCGGACCG
GCTGCGCAGCGCCAACATTGCTGGCTTGGTGCGGTGGCGGCCGCTGCGGT
GGTGCTGGAAGCTGCGACGGCGCTGGCGCTGCCGCGCATTGAAGCATCAT
GGATGTGCTCTCAGCACCGGTGCCTCCGGTGGCCCTCGTTGAGCCGCAGC
CGCTGCTGCTGCTTTGAGGGCCGCAGAACGGCAGCTGCGCGCCCTGCTGC
TGGTGCCGCTTGA