Trimin1|351732|estExt_Genemark1.C_Ctg_990006 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|351732
Unique Name	Trimin1\|351732\|estExt_Genemark1.C_Ctg_990006
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	571

Homology

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BLAST of jgi.p|Trimin1|351732 vs. uniprot
Match: A0A835YQY8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQY8_9STRA)

HSP 1 Score: 830 bits (2144), Expect = 9.040e-299
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 0

Query:    1 MRPATVGEEAPIQPGQEVDASHFEQRAALPDLWQVKCLAEAVSIYRHVERAIEDRKDKLVRRGDYDEVKELEVALDGMRTEFXXXXXXXXXXXXXXXXXXXXQLRGQAEERDRQRAAYVMXXXXXXXXXXXXXXSAASARVLRAATADAAHELSAVTEACARAERDAAHAHDIERDNLELRIGWAPPPRVKYSRAFLELQHGVAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKEEAAHAHRCARAVDARRRDLDTTQAEXXXXXXXXXXXXXXXXXXXXXWARLGQGLREARLSAQREARAALAVTRARLDHVASDMAHAHAMIALKKPELAARPSALWRERAHHAATASAAHGDHLADRVKGRRRGDAVAVASLARVHDFGDGGSGGAAALSGTVTLHRALAGAPRSSSTRRTRADGGNSAVTAARGGWMTLCISVMCRVLHPGVANTTVMAPPLLLLPLLLLAGAVACSGPAAQRQHCWLGAVAAAAVVLEAATALALPRIEASWMCSQHRCLRWPSLSRSRCCCFEGRRTAAARPAAGAA 570
            MRPATVGEEAPIQPGQEVDASHFEQRAALPDLWQVKCLAEAVSIYRHVERAIEDRKDKLVRRGDYDEVKELEVALDGMRTEFXXXXXXXXXXXXXXXXXXXXQLRGQAEERDRQRAAYVMXXXXXXXXXXXXXXSAASARVLRAATADAAHELSAVTEACARAERDAAHAHDIERDNLELRIGWAPPPRVKYSRAFLELQHGVAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKEEAAHAHRCARAVDARRRDLDTTQAEXXXXXXXXXXXXXXXXXXXXXWARLGQGLREARLSAQREARAALAVTRARLDHVASDMAHAHAMIALKKPELAARPSALWRERAHHAATASAAHGDHLADRVKGRRRGDAVAVASLARVHDFGDGGSGGAAALSGTVTLHRALAGAPRSSSTRRTRADGGNSAVTAARGGWMTLCISVMCRVLHPGVANTTVMAPPLLLLPLLLLAGAVACSGPAAQRQHCWLGAVAAAAVVLEAATALALPRIEASWMCSQHRCLRWPSLSRSRCCCFEGRRTAAARPAAGAA
Sbjct:    1 MRPATVGEEAPIQPGQEVDASHFEQRAALPDLWQVKCLAEAVSIYRHVERAIEDRKDKLVRRGDYDEVKELEVALDGMRTEFXXXXXXXXXXXXXXXXXXXXQLRGQAEERDRQRAAYVMXXXXXXXXXXXXXXSAASARVLRAATADAAHELSAVTEACARAERDAAHAHDIERDNLELRIGWAPPPRVKYSRAFLELQHGVAGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKEEAAHAHRCARAVDARRRDLDTTQAEXXXXXXXXXXXXXXXXXXXXXWARLGQGLREARLSAQREARAALAVTRARLDHVASDMAHAHAMIALKKPELAARPSALWRERAHHAATASAAHGDHLADRVKGRRRGDAVAVASLARVHDFGDGGSGGAAALSGTVTLHRALAGAPRSSSTRRTRADGGNSAVTAARGGWMTLCISVMCRVLHPGVANTTVMAPPLLLLPLLLLAGAVACSGPAAQRQHCWLGAVAAAAVVLEAATALALPRIEASWMCSQHRCLRWPSLSRSRCCCFEGRRTAAARPAAGAA 570

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BLAST of jgi.p|Trimin1|351732 vs. uniprot
Match: A0A7S2GWW2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GWW2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.040e-5
Identity = 34/90 (37.78%), Postives = 52/90 (57.78%), Query Frame = 0

Query:  336 RLDHVASDMAHAHAMIALKKPELAARPSALWRERAHHAATASAAHGDHLADRVKGRRRGDAVAVASLARVHDFGDGGSGGAAALSGTVTL 425
            R+ ++  DM HAH ++  K+PE+   PSA W++R  H  +++   G HL D  KG+++  AV VASL   H+F        A L GT+T+
Sbjct:  274 RITNMRRDMDHAHHLVLQKQPEMNTEPSAHWQDRPSHQESSAHFRGRHLHDACKGKKKDQAVYVASLCDNHEFD-------APLEGTMTI 356

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351732 vs. uniprot

BLAST of jgi.p|Trimin1|351732 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YQY8_9STRA	9.040e-299	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2GWW2_9STRA	2.040e-5	37.78	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 68..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_99	contig	Contig_99:39733..47035 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351732	mRNA_12230	Tribonema minus UTEX_B_3156	mRNA	Contig_99 39712..47035 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|351732|estExt_Genemark1.C_Ctg_990006 ID=Trimin1|351732|estExt_Genemark1.C_Ctg_990006|Name=jgi.p|Trimin1|351732|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=571bp
MRPATVGEEAPIQPGQEVDASHFEQRAALPDLWQVKCLAEAVSIYRHVER
AIEDRKDKLVRRGDYDEVKELEVALDGMRTEFQQLQGLEVKLDGMRKAFQ
PLQLRGQAEERDRQRAAYVMRDQAEERERQRAAYSAASARVLRAATADAA
HELSAVTEACARAERDAAHAHDIERDNLELRIGWAPPPRVKYSRAFLELQ
HGVAGIKYSRAFLELQHAEKSLVKLRQYNEAQLAEKSLVKLRQYHEAQLV
RRALDKRRPKEEAAHAHRCARAVDARRRDLDTTQAEERCARANDARRRDL
ATTQAEEWARLGQGLREARLSAQREARAALAVTRARLDHVASDMAHAHAM
IALKKPELAARPSALWRERAHHAATASAAHGDHLADRVKGRRRGDAVAVA
SLARVHDFGDGGSGGAAALSGTVTLHRALAGAPRSSSTRRTRADGGNSAV
TAARGGWMTLCISVMCRVLHPGVANTTVMAPPLLLLPLLLLAGAVACSGP
AAQRQHCWLGAVAAAAVVLEAATALALPRIEASWMCSQHRCLRWPSLSRS
RCCCFEGRRTAAARPAAGAA*