mRNA_11945 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351192
Unique Name	mRNA_11945
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351192 vs. uniprot
Match: A0A835YIR5_9STRA (Clathrin light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR5_9STRA)

HSP 1 Score: 394 bits (1012), Expect = 4.140e-137
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 3

Query:   81 MDNDSDFFGEDQQTPIDATADITPSAEGYTDFGGDYVGGGYKGGGAEDYQQQQDAGQYGSLDGDEMNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA 692
            MDNDSDFFGEDQQTPIDATADITPSAEGYTDFGGDYVGGGYKGGGAEDYQQQQDAGQYGSLDGDEMNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA
Sbjct:    1 MDNDSDFFGEDQQTPIDATADITPSAEGYTDFGGDYVGGGYKGGGAEDYQQQQDAGQYGSLDGDEMNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA 204

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BLAST of jgi.p|Trimin1|351192 vs. uniprot
Match: D7G9H3_ECTSI (Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9H3_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 2.970e-35
Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 3

Query:  309 MAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA 692
            M   GMPAPE+V  +AL  FM  W+A L EKA+ E  AK  AL+AA+ D +    ER   KE +M  NR QEQ+FLEQLE +LESENPWER+VSLVDTQ+E    FKDTSR+ +++IQLKNDPI  S+
Sbjct:   95 MPDMGMPAPEDVEPSALDEFMERWQAGLVEKARIEAEAKAAALEAAKADLETHSVERAANKEAKMGQNREQEQIFLEQLEGELESENPWERVVSLVDTQSEVVEDFKDTSRMTSILIQLKNDPIDTSS 222

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BLAST of jgi.p|Trimin1|351192 vs. uniprot
Match: A0A7S3Y6V3_HETAK (Clathrin light chain n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6V3_HETAK)

HSP 1 Score: 107 bits (267), Expect = 5.080e-24
Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 3

Query:  276 MNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA 692
            ++  +D   G     G P    +   AL  FM +WE +L+EK   EE A ++A Q A+ + D F+A++E   E +M+ NR++EQV LEQLE+DLES+NPWERI +LVD QAE  G   D SR+++++IQLKN+P+   A
Sbjct:  127 LDATQDMMGGAQMMMGEP---HMMRTALDDFMDKWEQELREKRAVEEQAAEEAKQKAKAELDHFYAQKEKTFEAKMSKNRSEEQVLLEQLEADLESDNPWERITNLVDLQAE--GDDVDKSRMRSILIQLKNEPLEVKA 260

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BLAST of jgi.p|Trimin1|351192 vs. uniprot
Match: A0A7R9VTD9_9STRA (Clathrin light chain n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VTD9_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.310e-19
Identity = 54/136 (39.71%), Postives = 84/136 (61.76%), Query Frame = 3

Query:  282 PAEDGSNGHMAFQGMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHAS 689
            P E G+    +    P PEE   + + ++  EW+  LKE+  AE AAK +A++AAR + +KF AER+ ++ETRM  NR  EQ  LE +E+DLE++N W+R+V LV+   +      D  R++ ++I LKN+P  A+
Sbjct:  102 PFEAGAAAEDSLLPEPEPEEKGPSPMQKWNDEWQVTLKERKDAENAAKAEAVEAARVELEKFQAERDARRETRMAKNRADEQDKLEAIEADLENDNSWQRVVKLVELTHDTVEGAADVHRMRDVMITLKNEPARAT 237

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BLAST of jgi.p|Trimin1|351192 vs. uniprot
Match: K0S5A2_THAOC (Clathrin light chain n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5A2_THAOC)

HSP 1 Score: 92.8 bits (229), Expect = 5.910e-19
Identity = 56/142 (39.44%), Postives = 90/142 (63.38%), Query Frame = 3

Query:  285 AEDGSNGHMAFQGMPAPEEVAD---NALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA*HA 701
            A+D   G MA    PAP  +A    +A+ ++  EW+  L ++ + E A K   ++AAR D +KF AERE ++ETRM  NR+ EQ  LE +E+DLE++N W+R+V +++   + +    DT+R+K +++ LKN+P  ASA +A
Sbjct:   81 ADDDDGGLMA----PAPVSMAPPEPSAMQKWNEEWQTTLLQRKEEENALKASQVEAARADIEKFQAEREKRRETRMAKNRSDEQDKLEAIEADLENDNSWQRVVKMIELNQDSADGSADTNRMKDVLVLLKNEPDKASALNA 218

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BLAST of jgi.p|Trimin1|351192 vs. uniprot
Match: A0A7S2UWZ8_9STRA (Clathrin light chain n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWZ8_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.460e-18
Identity = 51/119 (42.86%), Postives = 74/119 (62.18%), Query Frame = 3

Query:  324 MPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPI 680
            +  PE VA  AL  F  +W+ KL EKA+ E    Q+ +Q A+ + DKF+ E+ +++E+R + NR  EQ  LE+LE+DLE EN WER+ SLVD   +      D SR+  +I QLK +P+
Sbjct:   88 LEIPEPVARTALDDFEEQWKEKLAEKAELERQTTQETIQKAKQNLDKFYDEKRVQRESRQSKNRQLEQSMLEKLEADLECENAWERVSSLVDLTLDGGEDAPDQSRMVALITQLKREPL 206

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BLAST of jgi.p|Trimin1|351192 vs. uniprot
Match: A0A2D4BVD7_PYTIN (Clathrin light chain n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVD7_PYTIN)

HSP 1 Score: 89.7 bits (221), Expect = 1.260e-17
Identity = 59/144 (40.97%), Postives = 83/144 (57.64%), Query Frame = 3

Query:  324 MPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQA--------------------EPSGPFK-----DTSRIKTMIIQLKNDPI 680
            MPA EE  DN LT+FM ++EA++ +KAQ +E    +  + A+ D D+F  ER  KKE++  +NR QEQ  LE+L +DLESENPWER+VSLVD +                     EP    K     D SR++ + +QLK +P+
Sbjct:   91 MPAVEE--DNELTKFMRQYEAEIAQKAQEQEKVGVECKEKAKKDMDQFQTERSRKKESKQQANRVQEQATLEKLAADLESENPWERVVSLVDLEVNRKQKLAALNNKKDAKNKEPEPVKSSKKEDEEDLSRMRQLFVQLKAEPL 232

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BLAST of jgi.p|Trimin1|351192 vs. uniprot
Match: A0A7S2RJR1_9STRA (Clathrin light chain n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RJR1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 4.000e-17
Identity = 50/131 (38.17%), Postives = 82/131 (62.60%), Query Frame = 3

Query:  309 MAFQGMPAPEEVADNALT---RFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPIHASA 692
            M    +P PE    +  T   ++  EW   L+E+  AE AAK + ++AA+ + ++F  ERE+K+ET+M +NR+ EQ  LE +E+DLE++N W+R+V +V+   + +    D SR+K ++I LKN+P  A A
Sbjct:   99 MTEDNLPEPEAAEPDETTPMAKWNQEWTVTLRERKDAENAAKGEHVEAAQAELERFQTEREVKRETKMTNNRSDEQEKLEAIEADLENDNSWQRVVKMVELNHDAAEGSLDVSRMKDVMIFLKNEPSRAIA 229

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BLAST of jgi.p|Trimin1|351192 vs. uniprot
Match: A0A812V5R7_SYMMI (Clathrin light chain n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V5R7_SYMMI)

HSP 1 Score: 83.6 bits (205), Expect = 4.040e-16
Identity = 47/125 (37.60%), Postives = 79/125 (63.20%), Query Frame = 3

Query:  321 GMPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQAE-PSGPFK-DTSRIKTMIIQLKNDPIHAS 689
            GMP PE   ++AL++F  EW  +L+EK + E+AA+++A   A  +   + A+R+ +   +   NR++EQV LEQLESDL+  N W+R+  L++   + P  P + D SR++ + I LKN+P+  +
Sbjct:   27 GMPEPE--VEDALSKFNREWNERLEEKKRKEDAAEEEAKATAAEELANYLAQRQTRMSAKKEVNRSEEQVLLEQLESDLDGANVWDRVSKLIEAGVDVPDDPDRADVSRMRKLFIHLKNEPLETT 149

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BLAST of jgi.p|Trimin1|351192 vs. uniprot
Match: A0A8K1CW16_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CW16_PYTOL)

HSP 1 Score: 84.0 bits (206), Expect = 1.560e-15
Identity = 56/144 (38.89%), Postives = 78/144 (54.17%), Query Frame = 3

Query:  324 MPAPEEVADNALTRFMGEWEAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQVFLEQLESDLESENPWERIVSLVDTQ--------------------AEPSGPFK-----DTSRIKTMIIQLKNDPI 680
            M  P    +N LT+FM ++E ++  KAQ +E    +  + A+ D ++F AER   KE++  SNR QEQ  LE+L  DLESENPWER+VSLVD +                    AE   P K     D SR++ + +QLK DP+
Sbjct:   81 MSVPVIEEENELTKFMRKYEGEIAAKAQEQEKVGVECKEKAKHDMEQFTAERSRIKESKQQSNRVQEQATLEKLALDLESENPWERVVSLVDLETNRKQKLAALNAKKDGKNKEAEAPKPVKKEEEEDVSRMRQLFVQLKADPL 224

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351192 vs. uniprot

BLAST of jgi.p|Trimin1|351192 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YIR5_9STRA	4.140e-137	100.00	Clathrin light chain n=1 Tax=Tribonema minus TaxID...	[more]
D7G9H3_ECTSI	2.970e-35	57.81	Clathrin light chain n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A7S3Y6V3_HETAK	5.080e-24	44.60	Clathrin light chain n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7R9VTD9_9STRA	1.310e-19	39.71	Clathrin light chain n=1 Tax=Pseudictyota dubia Ta...	[more]
K0S5A2_THAOC	5.910e-19	39.44	Clathrin light chain n=1 Tax=Thalassiosira oceanic...	[more]
A0A7S2UWZ8_9STRA	1.460e-18	42.86	Clathrin light chain n=1 Tax=Fibrocapsa japonica T...	[more]
A0A2D4BVD7_PYTIN	1.260e-17	40.97	Clathrin light chain n=1 Tax=Pythium insidiosum Ta...	[more]
A0A7S2RJR1_9STRA	4.000e-17	38.17	Clathrin light chain n=1 Tax=Eucampia antarctica T...	[more]
A0A812V5R7_SYMMI	4.040e-16	37.60	Clathrin light chain n=1 Tax=Symbiodinium microadr...	[more]
A0A8K1CW16_PYTOL	1.560e-15	38.89	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_83	contig	Contig_83:126699..130902 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351192\|estExt_Genemark1.C_Ctg_830009
Preferred name	CLC
Description	Clathrin light chain
COG category	A
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2CBIT@1\|root,2S8RD@2759\|Eukaryota
Evalue	4.28e-37
Seed ortholog	2880.D7G9H3
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Clathrin light chain
Ec32 ortholog	Ec-28_000910.1
TranscriptId	351514
Track	FilteredModels1
ProteinId	351192

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351192	gene_11945	Tribonema minus UTEX_B_3156	gene	Contig_83 126699..130902 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351192	Trimin1\|351192\|estExt_Genemark1.C_Ctg_830009	Tribonema minus UTEX_B_3156	polypeptide	Contig_83 126866..130822 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11945_6	exon_11945_6	Tribonema minus UTEX_B_3156	exon	Contig_83 126699..126955 -
exon_11945_5	exon_11945_5	Tribonema minus UTEX_B_3156	exon	Contig_83 128042..128119 -
exon_11945_4	exon_11945_4	Tribonema minus UTEX_B_3156	exon	Contig_83 128504..128599 -
exon_11945_3	exon_11945_3	Tribonema minus UTEX_B_3156	exon	Contig_83 129192..129290 -
exon_11945_2	exon_11945_2	Tribonema minus UTEX_B_3156	exon	Contig_83 130350..130520 -
exon_11945_1	exon_11945_1	Tribonema minus UTEX_B_3156	exon	Contig_83 130742..130902 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_11945	UTR3_11945	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_83 126699..126865 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11945	CDS_11945	Tribonema minus UTEX_B_3156	CDS	Contig_83 130742..130822 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_11945	UTR5_11945	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_83 130823..130902 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_83:126699..130902-
coding sequence from alignment at Contig_83:126699..130902-

spliced messenger RNA

>mRNA_11945 ID=mRNA_11945|Name=jgi.p|Trimin1|351192|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=862bp|location=Sequence derived from alignment at Contig_83:126699..130902- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGTGCTCGTCGTGCTGCTCTAGGTGCCTGCTGTTGACAATCGGAGACGT
TTTTGTCCGGCAGCACTACCGCGTTGCACCATGGACAACGACAGCGACTT
CTTCGGCGAGGACCAGCAGACACCCATCGATGCCACAGCAGATATCACGC
CATCTGCAGAGGGCTACACCGATTTTGGAGGTGACTATGTGGGCGGGGGC
TACAAAGGCGGTGGAGCGGAGGATTACCAGCAGCAACAGGACGCTGGGCA
GTATGGCTCGCTGGACGGCGACGAGATGAACCCAGCAGAGGATGGCAGCA
ATGGCCACATGGCGTTCCAGGGTATGCCAGCGCCGGAGGAGGTCGCTGAC
AATGCGCTGACGCGGTTCATGGGGGAGTGGGAGGCCAAGCTCAAGGAGAA
GGCACAAGCTGAGGAGGCAGCAAAGCAACAGGCGCTGCAGGCTGCGCGTG
GTGACCACGACAAGTTCTTTGCTGAGCGTGAGCTGAAGAAGGAGACGCGC
ATGAACTCCAACAGGACACAGGAGCAGGTGTTCCTGGAGCAGCTTGAGTC
GGACCTGGAGTCTGAAAACCCATGGGAGAGGATTGTATCACTGGTGGACA
CACAGGCGGAGCCTTCTGGCCCCTTCAAGGACACCTCTCGCATCAAGACA
ATGATCATTCAGCTCAAGAACGACCCCATCCACGCATCTGCCTAGCATGC
CCTGCAGAAATGCTAACAAAGCAGCACTGCTCAGCTAAGTGCTGTTTTGT
AGCACGGCATGGAGGCGTATCAATGTATGTTGCCTTGGCTATTGCTGTGG
GGCCATGATGGCCTGCTACATGTAGAATCATATGACATCAATGAAAACCT
GGCTCTGACTCC

protein sequence of jgi.p|Trimin1|351192

>Trimin1|351192|estExt_Genemark1.C_Ctg_830009 ID=Trimin1|351192|estExt_Genemark1.C_Ctg_830009|Name=jgi.p|Trimin1|351192|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=205bp
MDNDSDFFGEDQQTPIDATADITPSAEGYTDFGGDYVGGGYKGGGAEDYQ
QQQDAGQYGSLDGDEMNPAEDGSNGHMAFQGMPAPEEVADNALTRFMGEW
EAKLKEKAQAEEAAKQQALQAARGDHDKFFAERELKKETRMNSNRTQEQV
FLEQLESDLESENPWERIVSLVDTQAEPSGPFKDTSRIKTMIIQLKNDPI
HASA*

mRNA from alignment at Contig_83:126699..130902-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11945 ID=mRNA_11945|Name=jgi.p|Trimin1|351192|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4204bp|location=Sequence derived from alignment at Contig_83:126699..130902- (Tribonema minus UTEX_B_3156 )
GCGTGCTCGTCGTGCTGCTCTAGGTGCCTGCTGTTGACAATCGGAGACGT
TTTTGTCCGGCAGCACTACCGCGTTGCACCATGGACAACGACAGCGACTT
CTTCGGCGAGGACCAGCAGACACCCATCGATGCCACAGCAGATATCACGC
CATCTGCAGAGGTAATGGAGCTGCTGCAGCTGTTGCATTGCTGCTCATTA
CAGCTGCAGAACTTTTGTTGTAATGTCCCGCTCATGACGCTGCCACACTT
ACGCCTTCATGCTTAGAAAATTTGATGGGGCAGTTATTCTCAAGAATGTC
GAAGCTAATACAGCTGTCAGGATGCCCTGCTGCAGGCAATGACGCGTGCC
TTGTGCGTGCTTTTCGCTTGTGCTCGTCGCAGGGCTACACCGATTTTGGA
GGTGACTATGTGGGCGGGGGCTACAAAGGCGGTGGAGCGGAGGATTACCA
GCAGCAACAGGACGCTGGGCAGTATGGCTCGCTGGACGGCGACGAGATGA
ACCCAGCAGAGGATGGCAGCAATGGCCACATGGCGTTCCAGGGTATGCCA
GCGGTAAGAAGCATCACACAAATATTCCGATAAGCTGGTGTGAAAAAATA
GTGCACTCTGGGTTGGTGTAGCTGATGCGTGTCAGCAAGGCTCAATTCGA
TGTTGTACAGCTGTTGCATGCTGGCAATGTGAGCCATAGCCATCTCGCTG
ACAACATTTGGTGCGGAAGGCAGTGAATGCCATGCCGTTTGTGAAGCTCT
GCAGTTTGCTGCTTGTAGGCGTGTTCAGTGTTGCAATCATATCACACAAC
TTACAAGCACTCATCAATGCTGGTCCTGACTTTCATTCTGTTCAATCACG
GCCTCTGTCAGTGACATGTGGATTGGCTGCAGTGTTGTGCAAGATTTGTG
AGTTCAGTGCCACCAAGGTCATGCAATGGGTCTTGTCATCGTATGACGCG
TACCGTCATGTGCCAAATTAGACCGGTCAGTCAAGAATAAGGAGCGTACC
GAGCACCGATCCTAATTAGGCCTGGGTGTTTTATCATGCATTCCTTTTTA
GGCCTGGTAGCACTTTTTTGTGGTCACCCTATTACTGGCGAGGCACACGA
AGCACAGCATGCAAGCAGATGACAGGTGCCATTGCATTGGTGCACACCTT
CATTGCGCCCTGGTCTGTCTTGGGTCTCTGGCTGCAGCCTGCCGACCTTC
TGTCTGTTACCCATTACGCGGTGGTTGAGAAGCAGTCGACGTCCGTTTAC
AGACACTTCAAGAAGTCTGAGTTCTCTCCTCGGTTCGACAGAGGAGACAG
AAGCAGAAGCAGACCAATGACTCTATGTCCAGCTGATGGTCATATAGTGC
CCATTTGAAGGTGTTTTGAGGGCCCTGTCCTAATTGCACCTGGTGCTTTT
CTTGCGTGATCCTTATTCAGTGTCTGAGTGCTTTTTCTGGACTTTCTAAC
TGTTTGACCAACAGGCCTAATTTCGCACATGACGGTACGTGCAGAAAGTC
ACATTGTACTTGGTGTATTTTGTGCGCTCTGCGCTGTGCGGAACCATGCC
CCCCCCTCCAACAATAATATACTCTGGCCCGCTGCTCCTTTGCTGCGTTG
TCACTTGTTCAGCCGGAGGAGGTCGCTGACAATGCGCTGACGCGGTTCAT
GGGGGAGTGGGAGGCCAAGCTCAAGGAGAAGGCACAAGCTGAGGAGGCAG
CAAAGCAACAGGTGCGTAATGATCATGGACACACAAAACAAGTGCACGGC
AAGACATCGGCAGCGCTCCTATATGTTTTGCTCTGATGTCATTGGTGTAT
GCCACTTAGTCAGGCCTATCGGTTCTGGCGACCGTTTGGTGCACTGCCTG
CGTGTAGCAACAATTTGCAGTCTATGCTTCGCTGTGAGAAACCATCTGTT
TTCTAGTGCATGCATTGCTCACTTGAAGTTGACATGCTGGTAGATTAGAA
CTCTTAGTGTCAATTACATGTGTTGGCTGCTTGATGTGCGTTGGATATGC
TAAGAACTACTGTCAGCCAGCAACACATGGTGTGTGACGAGGTCAAATGA
AGAATAATATCAAATATCTTACTTGTCATATGCGTTTTGTCCAGACAGGC
AGCCCTGATGTGTGAGTGCTGCATGTGTTTATTGAGAAAGTCAGGATACT
CTGATGCAAAAGGATGTACGCCATAAATCACATACAGTCATGACATACAC
CTTCTTTCTGCCCAGTGCCAACTTTGCAGCCTGGTGCAACCCATGTCATC
CGCAACTGATTTCAGTCTTGGTCGTGCATCCGATTCTTTAAATGTGTGTA
CAGGCGCTGCAGGCTGCGCGTGGTGACCACGACAAGTTCTTTGCTGAGCG
TGAGCTGAAGAAGGAGACGCGCATGAACTCCAACAGGACACAGGAGCAGG
TCAGTCACATACTTCCACCACTTACAAGCTGTTGAGGCACTTGCGTATGT
TCAGCTCGTTTGTGTGGCCATCTGCTCAATTAATGTGGAGCTTTTTCGAA
ACAAACATTTCATGACTTTATGAATGTTGAGCTTTTTCATCTTGGCGTCA
ACATCTTGTGCAACTATACATTGGAATCTGAGATGACGCAATGCTTTGTG
CCTGCAGCAATGCAACAGTGCACCATGTCTAGGGAGCATATGTCTGGGTG
TGTGCGCATTAATTGATGCGACCCCTGAGTCATGTTGCGTGTGAGCAATG
ACATCACTAGTGCTTCAACATTACAACGACTTGTGGTGACTGTGCGATGC
CATTTGCTATTTCTCCCTCGCTGTCATCATCAGGTGTTCCTGGAGCAGCT
TGAGTCGGACCTGGAGTCTGAAAACCCATGGGAGAGGATTGTATCACTGG
TGGACACACAGGTGCGTTCAAGCTCAAATTTATGTTGAGGTTTGGTGGCA
CATTGTGACGGTGCATGATGTTTACAGCAAATTCAAAGTCACCAGTGACA
TCCCCCACTCCTGTGTTGAAGTGTGTATGAAGCTTTCATTATGGATGTTG
AATGATAACTATGGGCTTCTGTTGTGAGCAACACTGGCGGGGCTTCAGCA
GTTTAATACCAGTTGGGCACCTTTGATGCACCACTTGAATACACGTACAT
CTCTCGCACTCAATTGGTCAACGAAGCTGCTCCGCCGTTCAATACTTGGG
CCAGGCTCAGGGCTACTGTACACCCGTTCAGCATCATACATCAGACGCAC
GTTGGCCACAGGCTGATTGTCACACAAGTTTGCATTTGACCACTGCAGGC
CCAGTCAAGACCACTCATGATCTGCCTGCGCCTGCCTGCCGTTTTTCTGT
TCGGTTGTGAAATCTCAAACCCTAGTTTCACATACTCAGAGCCATTCTGT
ACTGCTTGTGCAGCCATGAATTTCTGGCGTGATTCACGTGCCGCGTTCCG
TACCGACATTCGCGACAGAAGCAATTTGTGTGGTTCATCAGTGTGACCTG
CGTCAGAGGTCGCTGACGACGCAGCGCATACTACGGCGCCAGAGCGGTGC
TGCTGGCACTAGCAGCATTCCCACAGGCCACGGCACGCGCAACGACTGCA
GCGCAAGCCACTATGCCTCGCCACCGAGTGCCTGGCATACGCACTAATGT
TCGGCCGCGCCGTCTGATTGGCTGAAATGTTCTCGCACTTCTTTAATCAC
GCCATGTTCCCTTCATCGACCCTGAAAGGTCGTCGTGAAAATCATGACCT
GATCAGCGGCCCTTCATGATCGACGCCACTGTTTTTTATTATATTTCACG
CCAAATTGGGACGTACAGAATGGCTCTGAGCACTCTTTGTCGAACAGTTC
TCCTAAAATCAGTTTCTGCTGAAATGTCAACCTTATGCTCAATCTTTGCT
GGCATTGTAAAGTATACCTGGAAGTACTACAGCAACCACTCTCTACTTTC
CAAACACGTGACGCTCTATCACTGCTTGCCTTCTCGTATTCGCGCAGGCG
GAGCCTTCTGGCCCCTTCAAGGACACCTCTCGCATCAAGACAATGATCAT
TCAGCTCAAGAACGACCCCATCCACGCATCTGCCTAGCATGCCCTGCAGA
AATGCTAACAAAGCAGCACTGCTCAGCTAAGTGCTGTTTTGTAGCACGGC
ATGGAGGCGTATCAATGTATGTTGCCTTGGCTATTGCTGTGGGGCCATGA
TGGCCTGCTACATGTAGAATCATATGACATCAATGAAAACCTGGCTCTGA
CTCC

Coding sequence (CDS) from alignment at Contig_83:126699..130902-

>mRNA_11945 ID=mRNA_11945|Name=jgi.p|Trimin1|351192|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=615bp|location=Sequence derived from alignment at Contig_83:126699..130902- (Tribonema minus UTEX_B_3156 )
ATGGACAACGACAGCGACTTCTTCGGCGAGGACCAGCAGACACCCATCGA
TGCCACAGCAGATATCACGCCATCTGCAGAGGGCTACACCGATTTTGGAG
GTGACTATGTGGGCGGGGGCTACAAAGGCGGTGGAGCGGAGGATTACCAG
CAGCAACAGGACGCTGGGCAGTATGGCTCGCTGGACGGCGACGAGATGAA
CCCAGCAGAGGATGGCAGCAATGGCCACATGGCGTTCCAGGGTATGCCAG
CGCCGGAGGAGGTCGCTGACAATGCGCTGACGCGGTTCATGGGGGAGTGG
GAGGCCAAGCTCAAGGAGAAGGCACAAGCTGAGGAGGCAGCAAAGCAACA
GGCGCTGCAGGCTGCGCGTGGTGACCACGACAAGTTCTTTGCTGAGCGTG
AGCTGAAGAAGGAGACGCGCATGAACTCCAACAGGACACAGGAGCAGGTG
TTCCTGGAGCAGCTTGAGTCGGACCTGGAGTCTGAAAACCCATGGGAGAG
GATTGTATCACTGGTGGACACACAGGCGGAGCCTTCTGGCCCCTTCAAGG
ACACCTCTCGCATCAAGACAATGATCATTCAGCTCAAGAACGACCCCATC
CACGCATCTGCCTAG