mRNA_11727 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Match: A0A835YM65_9STRA (Mannosyltransferase putative-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM65_9STRA) HSP 1 Score: 467 bits (1201), Expect = 1.420e-166 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1 Query: 1 RHWLRGVQDAHGAYPEGQFSSGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDTRVVDLYSLIDPLTQEPVTRPVGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTAWALAKPLAARGTIDGDKQMYGFAFAATGQ 681 RHWLRGVQDAHGAYPEGQFSSGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDTRVVDLYSLIDPLTQEPVTRPVGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTAWALAKPLAARGTIDGDKQMYGFAFAATGQ Sbjct: 1 RHWLRGVQDAHGAYPEGQFSSGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDTRVVDLYSLIDPLTQEPVTRPVGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTAWALAKPLAARGTIDGDKQMYGFAFAATGQ 227
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Match: A0A835YRK4_9STRA (Alpha-mannosyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK4_9STRA) HSP 1 Score: 386 bits (992), Expect = 5.030e-135 Identity = 185/206 (89.81%), Postives = 195/206 (94.66%), Query Frame = 1 Query: 64 GAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDTRVVDLYSLIDPLTQEPVTRPVGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTAWALAKPLAARGTIDGDKQMYGFAFAATGQ 681 GAGIVFCGGGASMLRQVM QI+YLRETLGCTLP+EVMHLGE EMT GWRAAL+ALPDTRVVDLYSL+DPLT+ PVTRP G+FTHVKPA VLLSSFEEVIFLDTNNYAM+DP ELL RDQY+RDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRW+ELVTAWAL PLAARGTI GDKQ+YGFAFAATGQ Sbjct: 2 GAGIVFCGGGASMLRQVMAQIIYLRETLGCTLPIEVMHLGEAEMTAGWRAALEALPDTRVVDLYSLVDPLTERPVTRPAGAFTHVKPAAVLLSSFEEVIFLDTNNYAMLDPTELLDRDQYRRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWRELVTAWALMTPLAARGTIHGDKQVYGFAFAATGQ 207
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Match: A0A1X2GA01_9FUNG (Nucleotide-diphospho-sugar transferase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GA01_9FUNG) HSP 1 Score: 92.0 bits (227), Expect = 6.170e-18 Identity = 68/220 (30.91%), Postives = 110/220 (50.00%), Query Frame = 1 Query: 19 VQDAHGAYPEGQFSSGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDT-RVVDLYSLIDPLTQEPVTRPVGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTAWALAKPLAARGT-IDGDKQMYGFAFAA 672 + D+ YP F G GIVF G ++V+ I LR CTLP+EV HL ++ + L+AL R + L+ P+TQ T +KPA ++ S FE+V+++D++N DP L +YK +G L W D W T+ A+ ++++L + +E ESG M K++ W+ L AW + + ++GDK + +A+ A Sbjct: 130 IDDSQNVYPVNAFH-GRGIVFVAGNRDTYQRVITSIYLLRHH-HCTLPIEVWHLPDEAPSTAIIRQLKALNVMPRDLSNQKLVRPMTQRNGTE---KQFQIKPAAIINSEFEQVLYMDSDNAPTADPTFLFDTPEYKANGALFWPDYW-KTNAAN--GIFNILDIDCQDEWEQ-ESGQMVIHKKKSWRPLQLAWYMNQNNDIYFQFLNGDKDTFKYAWKA 340
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Match: F2UJ78_SALR5 (Apple domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UJ78_SALR5) HSP 1 Score: 91.3 bits (225), Expect = 1.580e-17 Identity = 64/214 (29.91%), Postives = 107/214 (50.00%), Query Frame = 1 Query: 40 YPEGQFSSGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDTRVVDLYSLIDPLTQEPVTRPVGS-FTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTAWALAKPLAARGTIDGDKQMYGFAFAATG 678 YPEG++ G GI+ GG L + + LR+ LGCTL +++ HLG +E+ R L A D D +++ P +P+ VG +KP +L S +EV+ +D++N ++DP L ++ G + W D W ++ + ++++L + P +E ESG + +KR W+ L G I+GDK + FA+ A G Sbjct: 227 YPEGKYR-GRGIIIVAGGR-YLASALVSVKMLRD-LGCTLRIQIWHLGPEEVDAAQREVLAAY-DVEPRDFTAVVPPELLKPIESNVGMRLFQLKPLALLYSDLQEVLLIDSDNTPLMDPTYLFSEQGFQDTGTVFWPDYWKTS---FDNPIWAILGMEPKAMWEQ-ESGQLLINKRAAWRGLNLCVHFNSAFYM-GLINGDKDTFRFAWLAAG 431
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Match: UPI001B8A120F (hypothetical protein n=1 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI001B8A120F) HSP 1 Score: 90.9 bits (224), Expect = 1.680e-17 Identity = 71/216 (32.87%), Postives = 104/216 (48.15%), Query Frame = 1 Query: 10 LRGVQDAHGAYPEGQFSSGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDTRVVDLYSLIDPLTQEPVTRPVGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTAWALAKPLA-ARGTIDGDKQMY 654 LR Q A PEG+F+ G GIV C GG I LR LGC+LP++V HLG E+++G + L+ L VVD +I R G + +KP + S F+EV+FLD + ++DP + D Y+ L W D + + E ++S + +PP + ES ++ DKRR W L A L + G + GDK + Sbjct: 9 LRRRQAAPAICPEGRFA-GRGIVTCAGGLRYFTCAWMLIWTLRRKLGCSLPIQVWHLGRREISEGMQLILEEL-GVEVVDAEQMISLYP----ARVSGGWP-LKPYAIANSRFQEVLFLDADTIPLVDPETVFDWDVYRSAPALFWPD---NLDLTKENGIWSKVGLPPRDCV-SFESSIIALDKRRCWPLLDLAMLLNEHWEDVYGFLHGDKDTF 213
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Match: A0A0D2MT28_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MT28_9CHLO) HSP 1 Score: 90.1 bits (222), Expect = 3.600e-17 Identity = 76/204 (37.25%), Postives = 99/204 (48.53%), Query Frame = 1 Query: 1 RHWLRGVQDAHGAYPEGQFSSGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDT-RVVDLYSL-IDPLTQEPVTRP---VGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENS-ESGVMYWDKRRRWKELVTA 594 R L A YP G FS GAG+V GGG + + LR T GC LP+E+ + + A L T R +D L I +P P + FT +K A +LLS F+EVI+LD +N + DPA LL +Y G L+W D W +T +A E +L VP F S ESG M DK R W+ L+TA Sbjct: 203 RSQLAAYSAAMPTYPRGAFS-GAGVVTVGGGMRYIIPAWIMVHQLRHT-GCKLPIEMWYPISEWPPQAVVDAFAKLGVTSRKLDFRGLNITAFKHDPKAPPHDTMARFT-IKVAAILLSRFQEVIYLDADNIPLKDPAHLLDGPEYNATGALLWQDFWDNT-VAPE--AEQMLGVPRSDWFRGSFESGQMVVDKARHWRGLLTA 400
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Match: A0A2V0P7B2_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P7B2_9CHLO) HSP 1 Score: 89.7 bits (221), Expect = 5.040e-17 Identity = 73/205 (35.61%), Postives = 101/205 (49.27%), Query Frame = 1 Query: 1 RHWLRGVQDAHGAYPEGQFSSGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDT-RVVDLYSL-IDPLTQEPVTRP-----VGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTA 594 R L G+ A YP G FS G GIV GGG + + LR LGC LP+E+ + + D AA L T R +D L I ++P ++ + FT +K A +LLS FEE+I+LD +N + DP+ LL +Y G L+W D W +T + L + PG + ESG M +KRR W+ LV A Sbjct: 260 RSQLNGLLAAIPGYPHGTFS-GRGIVTVGGGMRYIVPAWMMVHQLRH-LGCRLPIEMWYPETEWPGDEAVAAFARLGVTSRKMDFRGLNITAFKEDPKSKSFDPNGMARFT-IKVAALLLSRFEEIIYLDADNVPLRDPSPLLDTPEYNATGALLWQDFWDNTMAPQAEQMLGLPRSEWYPG--SFESGQMVINKRRHWRGLVVA 459
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Match: A0A2K3DCG0_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DCG0_CHLRE) HSP 1 Score: 87.0 bits (214), Expect = 2.800e-16 Identity = 77/222 (34.68%), Postives = 106/222 (47.75%), Query Frame = 1 Query: 40 YPEGQFSSGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDTRVVDLYSLIDPLTQEPVTRPVGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIA--HEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTAWAL---AKPLAARGTI---DGDKQMYGFAFAATGQ 681 YP FS G G+V GGG L + LR++ GC LPVEV ++ + AAL+ L V L ++D L Q +K A +LLSSF+EV+FLD++N A+ DP+ L QY G L W D W +S+ HE + QVP ESG M DK R W+ L+ A + K A + GDK+ + +A A G+ Sbjct: 28 YPPAAFS-GRGVVMVGGGLHYLIPAWASLSVLRKS-GCHLPVEVWFPVAEQPSRPAVAALEGLGGVAVRTL-DVVD-LQQRGFA--------LKSAALLLSSFQEVLFLDSDNLAVRDPSPLFASPQYAATGALFWRDFWDRSSVPEIHEVLRFPNEQVPKV----TFESGQMVIDKARHWRGLLLAVYMNVYGKTFAELLSCYLGKGDKETFVYAMLAAGE 233
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Match: A0A8J4GP40_9CHLO (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GP40_9CHLO) HSP 1 Score: 87.4 bits (215), Expect = 2.970e-16 Identity = 71/213 (33.33%), Postives = 100/213 (46.95%), Query Frame = 1 Query: 61 SGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDTRVVDLYSLIDPLTQEPVTRPVGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTA------WALAKPLAARGTIDGDKQMYGFAFAATGQ 681 SG G+V GGG L + LR T GC LPVE+ E+ T A +AL D V+ L Q+ VK A +LLSSF+EV+FLD++N + DP L ++Y G L+W D W T+ + ++ P G + ESG M DK R W+ LV A A+ L + GDK+ + ++ ATG+ Sbjct: 328 SGRGVVMVGGGIRYLTPAWASLHVLRRT-GCKLPVELWFPVEEFPTP---AVEEALLDLGVMSRRLSARDLAQKGFG--------VKVAALLLSSFQEVLFLDSDNTVLRDPTFLFESEEYVSTGALLWPDYWDRTAAPEVAQILNISASRLPAG--SFESGEMVIDKARHWRGLVLAAYMNVYGAVFSELLSCYIGKGDKETFAYSMLATGE 526
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Match: A0A8J4CTC4_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CTC4_9CHLO) HSP 1 Score: 87.4 bits (215), Expect = 3.210e-16 Identity = 71/213 (33.33%), Postives = 100/213 (46.95%), Query Frame = 1 Query: 61 SGAGIVFCGGGASMLRQVMGQILYLRETLGCTLPVEVMHLGEDEMTDGWRAALQALPDTRVVDLYSLIDPLTQEPVTRPVGSFTHVKPAVVLLSSFEEVIFLDTNNYAMIDPAELLLRDQYKRDGYLMWSDLWLSTSIAHEYAVYSLLQVPPPPGFENSESGVMYWDKRRRWKELVTA------WALAKPLAARGTIDGDKQMYGFAFAATGQ 681 SG G+V GGG L + LR T GC LPVE+ E+ T A +AL D V+ L Q+ VK A +LLSSF+EV+FLD++N + DP L ++Y G L+W D W T+ + ++ P G + ESG M DK R W+ LV A A+ L + GDK+ + ++ ATG+ Sbjct: 328 SGRGVVMVGGGIRYLTPAWASLHVLRRT-GCKLPVELWFPVEEFPTP---AVEEALLDLGVMSRRLSARDLAQKGFG--------VKVAALLLSSFQEVLFLDSDNTVLRDPTFLFESEEYVSTGALLWPDYWDRTAAPEVAQILNISASRLPAG--SFESGEMVIDKARHWRGLVLAAYMNVYGAVFSELLSCYIGKGDKETFAYSMLATGE 526 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|131501 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11727 ID=mRNA_11727|Name=jgi.p|Trimin1|131501|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=681bp|location=Sequence derived from alignment at Contig_80:193586..194266- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AGACACTGGCTGCGTGGCGTGCAGGATGCCCATGGTGCATACCCTGAAGGback to top protein sequence of jgi.p|Trimin1|131501 >Trimin1|131501|gw1.80.6.1 ID=Trimin1|131501|gw1.80.6.1|Name=jgi.p|Trimin1|131501|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=227bp RHWLRGVQDAHGAYPEGQFSSGAGIVFCGGGASMLRQVMGQILYLRETLGback to top mRNA from alignment at Contig_80:193586..194266- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11727 ID=mRNA_11727|Name=jgi.p|Trimin1|131501|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=681bp|location=Sequence derived from alignment at Contig_80:193586..194266- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_80:193586..194266- >mRNA_11727 ID=mRNA_11727|Name=jgi.p|Trimin1|131501|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=681bp|location=Sequence derived from alignment at Contig_80:193586..194266- (Tribonema minus UTEX_B_3156 )back to top |