mRNA_11627 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|173837
Unique NamemRNA_11627
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A836CNW6_9STRA (Muts protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW6_9STRA)

HSP 1 Score: 1695 bits (4390), Expect = 0.000e+0
Identity = 952/952 (100.00%), Postives = 952/952 (100.00%), Query Frame = 1
Query:    1 MTPAPRSARRGGRNGGRASXGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEARAVRRLLLDTAPARGATSAAPGRGXXXXXXXXXXXXXXXXXATADALRLLSLLAAAPEMEAGALREAVVGVCARVDMGAVAAAAAELRPGXXXXXXXXXXPEGGAAPAAATKGRADEELGGIEPFTEDMHGVAPAQ 2856
            MTPAPRSARRGGRNGGRASXGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEARAVRRLLLDTAPARGATSAAPGRGXXXXXXXXXXXXXXXXXATADALRLLSLLAAAPEMEAGALREAVVGVCARVDMGAVAAAAAELRPGXXXXXXXXXXPEGGAAPAAATKGRADEELGGIEPFTEDMHGVAPAQ
Sbjct:    1 MTPAPRSARRGGRNGGRASXGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEARAVRRLLLDTAPARGATSAAPGRGXXXXXXXXXXXXXXXXXATADALRLLSLLAAAPEMEAGALREAVVGVCARVDMGAVAAAAAELRPGXXXXXXXXXXPEGGAAPAAATKGRADEELGGIEPFTEDMHGVAPAQ 952          
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: D8LJX0_ECTSI (MutS protein homolog 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX0_ECTSI)

HSP 1 Score: 644 bits (1661), Expect = 1.080e-214
Identity = 377/767 (49.15%), Postives = 494/767 (64.41%), Query Frame = 1
Query:  220 NTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDES--RVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEM-------RGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRH-MESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEARAVRRLLLDTAPAR 2490
            NT+++S+++++ + D+QSYA+T+A L+ + P EILLHDG R RVL+ K+V AFH+ ++S  RVLFVSRQYFDQDKGAELL+R+++ ++ AD+ + Y  LAA+ CL+RYVEN TG   A  SLRV   SG  G M IDRSTA ELELI +AR+  Q++SLFGVIN T+T+VGARLLRS IL P TD+ T+E RLDLV FFL+ E VF  TL+ L  F DLDRMLS LVTVPK VTP TA + I T+ICLRHT++L+AP+V+ LEEG+ E        R  GGG GE      +   ATG                                          ++  +LT+++   ++   +RH+ECFAV+ D++GMLDVAR TFLQS+EDIY  ADA T+E+      V  + +RGYHL +P  V +LP   IQAV+++K I+CTTE+V+SLSDRANEA+  ALL+T+ VIQ L + +R   +++LFAV ESVALLDM+FGFADLV  S L + RP +  DG + I  G HPIVGA+ +  K FVPN   M P  NF VVTG N SGKST L+Q   I ++AQ+GC+VPA  A IP+R  LL+R+ T DD+ENN+S+FL+EMRE A V+          +DELGRGTS  EG A+AWAV E LLS  A TLF THY+++ GLAD +PN  N+ L+ A    A             G    R+         D    YGI+ AE CG   E++ EAR +R  ++D   A+
Sbjct:    2 NTANSSVIQVSWVQDSQSYAKTLAALQGVDPDEILLHDGTRGRVLASKVVGAFHQIEKSCCRVLFVSRQYFDQDKGAELLKRLASGSVDADLMSKYTALAASYCLIRYVENSTGSTFADASLRVRTDSGGDGSMYIDRSTAKELELITDARSGGQKKSLFGVINHTRTAVGARLLRSTILGPCTDIATIEERLDLVTFFLTMEGVFNSTLKVLGEFTDLDRMLSDLVTVPKQVTPVTAGRSIATLICLRHTLRLMAPLVQALEEGVRESGQQSTARRDGGGGEGEYDERFHNGDDATGXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXERLDSVLTDSTSYTRNPAALRHEECFAVRADVDGMLDVARTTFLQSMEDIYRAADAMTEEH-SYQVKVSCSVSRGYHLIIPAGV-DLPPGLIQAVQNTKTIACTTEEVSSLSDRANEAVRTALLITHDVIQTLADEIRTEALDALFAVTESVALLDMIFGFADLVTLSPLAFCRPEVTADGPMSIRGGRHPIVGAVQEDWK-FVPNDTYMSPFINFRVVTGPNNSGKSTYLKQAGLIVLMAQMGCYVPAEMAVIPVRTSLLSRIGTGDDLENNVSTFLMEMREIAQVM----------IDELGRGTSNREGLAVAWAVAEKLLSSSAYTLFVTHYSQMPGLADLYPNVENIHLQTALAPAAAXXXXXXXXXXQTGAL--RYLHKALDGRCDPGDGYGIRTAEMCGLPWEIVEEARVLRTQVIDATKAK 751          
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A833WHC0_PHYIN (MutS domain V n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WHC0_PHYIN)

HSP 1 Score: 466 bits (1199), Expect = 5.180e-147
Identity = 289/787 (36.72%), Postives = 446/787 (56.67%), Query Frame = 1
Query:  151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEA-RAVRRLLLDTAPARGATS 2502
            + +  ++ AV ENR+RE  +   +      L + T+ D+ SY  T+A L++ QP EIL+ +  +   ++ +I + F   D  R++ V+R+YFDQ KGAE ++R+   N+  ++   Y+ +A+  C+++Y+E I G   A +S++V L S +  ++++D++T   LEL+   R      S++ ++N  +TS G RLLRS IL P+  L T++AR +++  FL +   F    E L  F DLDR+LS LV VPK +TP+ +   I +VI L+HT+  L  +V +LE    ++                                        D    LL +++ +L+D   A I+  I  ++ +     + A Q R QECFAV+  ++GMLDVAR+T+L ++E I+ +   Y +E    P  +  TA RGYHL +P +V +LP  +I+ V +   I C+T  + SL+ R NEAL     L+N VIQ L++ VR    ++ A+VES+ALLDML  F ++VA S     YTRPT+ + G ++I++G HP+V  +L   + ++P+     P+S F +VTG N +GKST LR TA I ++AQ+GC+VPA+ A IP+RDR+ TR  TSDDME N S+F VEM E A +L A+TP++L+L+DELGRGTS +EG AIAW++ E ++ R + T FATHY +L  LA  +P  R   +    +  +     + R+ +  G F          PS  +   YGI+ A  CG   ELI EA R   +L  D   A  AT+
Sbjct:   58 TRASFLIAAVAENRAREIGICAIDLVSPHELLLWTIIDSHSYVDTIALLKAYQPVEILVVETFKPHKINEEISKRFTGSD-CRIVPVARKYFDQTKGAEDIKRVMANNVDINIGRNYVAMASVACIMKYIEYIQGVYIAESSMKVVL-SPSTRKLLMDQATISSLELVQGTRGRKDNLSVYKMLNNAQTSAGNRLLRSTILQPTRHLKTIQARQEVIGIFLDNPAWFFDVQEELRGFVDLDRLLSQLVFVPKVITPRVSRIAIGSVIALKHTLDCLPRLVTSLETTSIKL----------------------------------------DRPCPLLNSVIQSLRDERFAGIKKDIERVVNDRVKICQPAAQKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEIVHMY-KENLGIPMRLNYTARRGYHLAIPVNVKDLPASFIERVAAKTVICCSTRALVSLNVRLNEALTAVYKLSNDVIQQLLDKVRPRASTMHAMVESIALLDMLLSFVNVVALSPPDQPYTRPTVTEHGNMIIKKGRHPLVERVLK-DQAYIPSNSFFDPVSTFHIVTGPNCAGKSTYLRATALITIMAQMGCYVPASEAIIPIRDRICTRFGTSDDMEENASTFAVEMTETAFILEASTPKSLILIDELGRGTSNDEGAAIAWSIAEEIIDRGSYTCFATHYHQLNRLAQMYPRCRCYHMGTESNTSSV----SFRYILKDGPF----------PSTGM---YGIKTAALCGLPAELIREAERTYEKLRSDREAAETATN 783          
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: W2RE84_PHYPN (DNA_MISMATCH_REPAIR_2 domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2RE84_PHYPN)

HSP 1 Score: 461 bits (1186), Expect = 5.320e-145
Identity = 286/774 (36.95%), Postives = 442/774 (57.11%), Query Frame = 1
Query:  151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTL------EARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEA 2448
            S S  ++ AV ENR+RE  +   +      L + T+ D+ SY  T+A L++ QP E+L+ + ++S  ++ +I + F    + RV+ ++R+YFDQ KGAE ++R+   N+  ++   Y+V+A+  C+++Y+E I G   A  S++V L S +  ++++D++T   LEL+   R  +  +SL  ++N T+TS G RLLRS +L P+  L T+      +AR ++V  FL +   F   +E LS F DLDR+L+ LV VPK +TP+ +   I +VI L+HT++ L  +V +LE    ++                                        D    LL +++ +L+D    WI+  I  ++ +      SA Q R QECFAV+  ++GMLDVAR+T+L ++E I+ +   Y +E    P  +  TA RGYHL VP +  +LP  +I+ V +   I C+T+ + SL+ R  EAL     L+N VIQ L++ +R    ++ A+VES+ALLDML  F ++VA S     YTRP + + G ++I++G HP+V  +L   + ++P+     PLS F ++TG N +GKST LR TA I ++AQ+GC+VPA+ A IP+RDR+ TR  TSDDME N S+F VEM E A +L A T ++LVL+DELGRGT+ +EG AIAW++ E L+ R + T FATHY +L  LA  +P  R   +    +  + V  R   + +  G F          PS+ +   YGI+ A Q G   ELI EA
Sbjct:   60 SRSSFLIAAVAENRAREIGICAIDLVSPYELLLWTVIDSHSYVDTVALLKAYQPVEVLVVETSKSGKVNEEISKRF-TGSKCRVVPLARKYFDQTKGAEDIKRVMANNVDINIGRNYVVMASVACVMKYIEYIQGVYIAEKSMKVVL-SPSTRKLLMDQATVSSLELVQGTRGRNDNQSLCKMLNNTQTSAGNRLLRSTMLQPTCHLKTMYPSAYNQARQEVVGIFLDNPAWFFDVMEELSGFVDLDRLLNQLVFVPKVITPRVSRIAIGSVIALKHTLECLPRLVSSLETTSIKL----------------------------------------DQPCPLLDSVIQSLRDEQFTWIKEDIERVVNDRVKVCTSAAQKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHMY-KENLGIPIRINYTARRGYHLAVPVNAKDLPASFIERVTTKTVICCSTKALVSLNVRLKEALTAVYKLSNDVIQQLLDKIRPRASTMHAMVESIALLDMLLSFVNVVALSPPDQPYTRPIVTEHGNMIIKKGRHPLVERVLK-DRAYIPSDSFFDPLSTFHIITGPNCAGKSTYLRATALITIMAQMGCYVPASEASIPIRDRICTRFGTSDDMEENASTFAVEMTETAFILEACTSKSLVLIDELGRGTANDEGAAIAWSIGEELIERGSYTCFATHYHQLNRLAQLYPRCRCYHMGTESNTNS-VHFR---YVLKDGPF----------PSSGM---YGIKTAAQSGLPAELIREA 772          
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A0P1B012_PLAHL (Dna mismatch repair protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B012_PLAHL)

HSP 1 Score: 452 bits (1164), Expect = 7.230e-142
Identity = 281/772 (36.40%), Postives = 433/772 (56.09%), Query Frame = 1
Query:  151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFE-RSHAGPSADLATDYGIQMAEQCGFLPELIAEARAV 2457
            + S  ++ AV ENR+RE  +   +      L + T+ D+ SY   ++ L++ QP EIL+ + ++++ ++ +I + F      RV+ ++R+YFDQ KGAE ++R+   ++  ++   Y+ +A+  C+++Y+E I G   A  S+++ + S +  ++++D++T   LEL+  A+     +SL  ++N T+TS G RLLRS IL P+  L T+ AR ++V  FL +   +   +E L  F DLDR+LS LV VPKA+TP+ +   I +VI L+H +  L  +V  LE    ++                                        D    LL +I+  L+D     I+  I  ++ +     +SA Q R QECFAV+  ++GMLDVAR+T+L ++E I+ +   Y +E    P  +  TA RGYHL VP ++ ELP  +I+ V +   I C+T+ + SL+ R  EA+     L+N VIQ L++ +R    ++ A+VES+ALLDML  F ++VA S     YTRPT+ + G  +I++G HP+V  +L   +R++P+     P S F +VTG N +GKST LR TA I ++AQ+GC+VPA+ A IP+RDR+ TR  TSDDME N SSF VEM E A +L   T R+LVL+DELGRGT+ +EG AIAW++ E L+ R A T FATHY +L  L+  +P  R   + A               G+    F  R+  +    PS D+   YGI+ A   G    LI EA  +
Sbjct:   57 ARSSFLIAAVAENRAREIGICAIDLVSPYELLLWTVIDSHSYVNALSLLKAYQPVEILVTETSKAKKVNEEICKNF-AGSSCRVVPLARKYFDQTKGAEDIKRVMANSVDINIGRNYVAMASVACVMKYIEYIQGVYIAEKSMKIVI-SPSICKLLMDQATISSLELVQGAQGRKDNQSLCKMLNNTQTSAGNRLLRSTILQPTCHLKTIHARHEVVGVFLDNPAWYFDVMEELREFVDLDRLLSQLVFVPKAITPRASRIAIGSVIALKHMLDCLPKMVSCLEAASVKL----------------------------------------DQPCTLLDSIIVILRDEQFTGIKADIERVVNDRVKVCRSAAQKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHTY-KENIGFPIRLNYTARRGYHLAVPVNIKELPSSFIERVTNRNVICCSTKVLVSLNVRLTEAVTAVYKLSNDVIQQLLDKIRPRASAMHAMVESIALLDMLLSFVNVVALSPPDRPYTRPTVTEHGNFIIKKGRHPLVECVLK-DRRYIPSDTFFDPSSTFHLVTGPNCAGKSTYLRATALITIMAQMGCYVPASDAAIPIRDRICTRFGTSDDMEENASSFAVEMTETAFILETCTSRSLVLIDELGRGTANDEGAAIAWSIGEELIQRGAFTCFATHYHQLNYLSQLYPRCRCYHMGA---------------GITTNSFHFRYVLKDGPFPSTDM---YGIKTAALSGLPTGLIREAEEI 766          
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A1Z5J6Y6_FISSO (DNA mismatch repair protein MSH4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6Y6_FISSO)

HSP 1 Score: 456 bits (1174), Expect = 7.120e-141
Identity = 286/785 (36.43%), Postives = 447/785 (56.94%), Query Frame = 1
Query:  151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESR--VLFVSRQYFDQDKGAELLRRISTKNL-GADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTP----------QTAAKGIETVICLRHTVQLLAPIVETLEEGMEEM-RGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDV-PELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQ----DGE-------LVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPN-GRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGF 2424
            S+   VVCA+ EN +RETC A  + S  + L +T   + QSYA+T+A LE L+P EILL++G  +  L+ KI+E FH ++     V F+SR +FDQ +GAELLRR+S  +     +   YI+L++ + +L Y +   G   A NSL +S+ +G   RM +DRS+ L+LEL+VNA+      SL G I+RTKT+VG+RLLRSN++SPS+ + T++ RL+LV  FL     F   ++HL+   D+D+MLS +  +PK +            + A++GI  ++ ++ T+  L  +   L   +E + R  G      T               D   +   L    +     LL+A+V  +  P L  +   ++ I TE +   ++   MRH+ECFA++ D   ++ V R+TFL++V+DI+  AD Y + Y      VR T+ RGY L VP ++  +LP +++Q  K+ +FI+CTTE++ASL+ RA + + + LL+T+  IQ++++  R   + L A+ ++VALLDM   FAD V   +  ++RP + +    D E        VI  G  PIV A  D  K FV N           +++G NGSGKST L+Q A I +LAQ G +VPA  A +P+RD+L  R+  +DD E+N+S+F+ EM+E A +   +  R+LVLVDELGR TS E+G AIAWA CE LL + ++T F +HY +L  +A+T+P   +N+ L A+                   +  +R+       + +++ DYG+++A  CG+
Sbjct:  113 SSPAHVVCAISENLARETCAASLDVSSPTQLHVTKQGNGQSYAETLACLEILRPHEILLNEGRSNSPLARKILETFHTENGEGCVVKFISRSFFDQTRGAELLRRVSRADTYDLTIVEEYILLSSVHAVLHYTQTNLGGSFARNSLFLSVNAGGLHRMTVDRSSILQLELLVNAKTAKVADSLIGCIDRTKTTVGSRLLRSNLMSPSSSIGTIQTRLELVDIFLGDADFFFEIMDHLTALPDVDKMLSNIAFIPKDIKEDPAVNIVQRRKVASRGISALVSIKTTLSSLPSLALALNSHLETLVRRFG-----ETERDQQQDDDLRTIRTDRSTLMVGLGGMGEVQRFHLLRAVVFTVSQPELDEVLQAVNAIFTEHTHFTRNNHAMRHKECFALKCDEADLMAVLRQTFLRNVDDIHKKADEYAEIYN-FHVQVRYTSVRGYFLAVPAEIGSDLPAVFLQPAKAGRFITCTTEEIASLNARATDNIQDLLLMTHDRIQEVIDYARARYDPLAALCDAVALLDMCHSFADHVTLVKTPWSRPVVFERFREDDESSDATNAFVIRNGHFPIVVAGED--KAFVANDTYAPASKPLTIISGINGSGKSTYLKQIAIITILAQCGSYVPAERASVPIRDQLCCRIGNTDDQEHNISTFMQEMKETAFICNNSNTRSLVLVDELGRATSNEDGVAIAWATCEYLLKKQSITFFVSHYPQLTCMAETYPQLVQNVHLSASVGQATGE----------NDIGEIRYTHKVQPGACNVSADYGVELAAHCGW 879          
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A6A3YAW5_9STRA (DNA mismatch repair protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YAW5_9STRA)

HSP 1 Score: 461 bits (1186), Expect = 9.300e-141
Identity = 271/703 (38.55%), Postives = 412/703 (58.61%), Query Frame = 1
Query:  151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGR 2253
            S S  ++ AV ENR+RE  +   +      L + T+ D+ SY  TM+ L++ QP EIL+ + ++SR ++ +I + F      RV+ ++R+YFDQ KGAE ++R+   N+  ++   Y+ +A+  C+++Y+E I G   A  +++V L S +  ++++D +T   LEL+   R  +  +SL  ++N T+TS G RLLRS +L P+  L T++AR ++V  FL +   F   +E L  F DLDR+LS LV VPK +TP+ +   I +VI L+HT++ L  +V  LE    ++                                        D    LL +I+ +L+D     I+  I  ++ +     +SA + R QECFAV+  ++GMLDVAR+T+L ++E I+ +   Y +E    P  +  T+ RGYHL VP +  +L   +I+ V +   I C+T+ + SL+ R NEAL     L+N VIQ L++ +R    ++ A+VESVALLDML  F ++VA S     YT+PT+ + G LVI++G HP+V  +L   + ++P+     PLS F +VTG N +GKST LR  A I +LAQ+GC+VPA+ A IP+RDR+ TR  TSDDME N SSF VEM E A +L   T R+LVL+DELGRGT+ +EG AIAW++ E ++ R + T FATHY +L  LA  +P  R
Sbjct:  480 SRSSFLIAAVAENRAREIGICAIDLVSPYELLLWTVIDSHSYVDTMSLLQAYQPVEILVVETSKSRKINDEIAKRF-SGSNCRVVPLARKYFDQTKGAEDIKRVMANNVDINIGRNYVAMASVACVMKYIEYIQGVYIAEKTMKVVL-SPSTRKLLMDHATVSALELVQGTRGRNDSQSLSRMLNNTQTSAGNRLLRSTMLQPTCHLKTIQARQEVVGIFLDNPAWFFDVMEELRDFVDLDRLLSQLVFVPKVITPRVSRIAIGSVIALKHTLECLPKLVSCLETTSVQL----------------------------------------DRPCPLLDSIIQSLRDEQFTGIKADIERVVNDRVKVCRSAARKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHTY-KENLGIPIRLNYTSRRGYHLAVPVNCNDLSACFIERVATKSVICCSTKALVSLNVRLNEALTAVYKLSNDVIQQLLDKIRPRASTMHAMVESVALLDMLLSFVNVVALSPPDQPYTKPTITEHGNLVIKKGRHPLVERVLK-DRTYIPSDTFFDPLSTFHIVTGPNCAGKSTYLRAMALITILAQMGCYVPASEATIPIRDRICTRFGTSDDMEENASSFAVEMTETAFILETCTSRSLVLIDELGRGTANDEGAAIAWSISEEMIQRGSYTCFATHYHQLNRLAQLYPRCR 1138          
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A8K1CR11_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR11_PYTOL)

HSP 1 Score: 449 bits (1155), Expect = 1.410e-140
Identity = 281/768 (36.59%), Postives = 422/768 (54.95%), Query Frame = 1
Query:  151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEA 2448
            S S  ++ AV ENR+RE  +   + +    L +  + D+QSYA+T+  L+  QP EIL+ + A+ + ++  I +A  +   SR++ V R+YFDQ KGAE LRR+    +  ++   Y+V+AA +C+L+YVE I G   A  +++V L + +  ++++D++T   LEL+  +R    R+SL+G++N TKTS G RLLRS +L P   L T++ R D V  FL +   F   LE L  FAD++R+LS LV  PK +TP+ +   I  VI L+H ++ L  + + L     E                                        +D   ELL  +  +++      I+  I  ++ E      SA Q R QECFAV+  I+GMLDVAR+T+L ++E I+ L   +     E P  +  ++ RGYHL +P +  ++P + ++ V + K I C+T+++ SL+ R  EAL     L+N VIQ+L+  +R     L+A+VE +ALLDML  F ++VA S     Y  P + + G LVI+ G HP+V  ++   + F+PN    GP S F V+TGAN +GKST ++  A I +LA +GC VPA  A IPL DR+ TR  TSDDME N S+F VEM E + +L   T R+LVL+DELGRGT+ +EG+AIAW+V E L+ R + T FATHY  +  LA  + N R   L                 G   G   + F          ++  YGI  A+ CG  P++I++A
Sbjct:   56 SRSSFLIAAVAENRAREVGICAVDLAAPYELLLWNVIDSQSYAETLTLLQVYQPVEILVVETAKPQHVNDAINKASIRST-SRIVPVGRKYFDQTKGAEDLRRVMANRIDVNISRNYVVMAAVSCMLQYVEFIQGVFIAEKTMKVVL-NPSSNKLLLDQATITSLELVRCSRGDSTRQSLWGILNNTKTSAGNRLLRSTMLQPLRHLKTIQNRQDAVEIFLKNPGWFFDLLEELPNFADIERILSQLVMAPKVITPRVSRLAIGNVIALKHALECLPSLYQCLTSSHTE----------------------------------------NDQSCELLSTLYSSVRPELFEDIQRDIGLVINERVKVSHSAAQKRIQECFAVRAGIDGMLDVARRTYLDTIEKIHELVHKFKGSM-EVPVRLSYSSRRGYHLVLPCNAKDIPSLIVERVPTKKAIYCSTKELKSLNGRLEEALMAVYKLSNNVIQNLLNKIRPRATVLYAMVEGIALLDMLLSFTNVVAASPPDRPYVCPRVSECGSLVIKDGRHPLVERVMQ-DQDFIPNNTFFGPTSTFHVITGANCAGKSTYMKAVALITILAHMGCHVPATDAFIPLCDRICTRFGTSDDMEENASTFAVEMTETSFILETCTSRSLVLIDELGRGTANDEGQAIAWSVSEELIKRRSYTCFATHYHRMNALAKLYVNCRCYHL-----------------GAVPGQNHILFRYKLCDGGLSMSVKYGIITAKICGIPPDVISQA 762          
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: T0S8L0_SAPDV (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S8L0_SAPDV)

HSP 1 Score: 447 bits (1149), Expect = 5.880e-140
Identity = 279/773 (36.09%), Postives = 433/773 (56.02%), Query Frame = 1
Query:  169 VCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVP-GDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEARAVRRLLLDT 2478
            +  + E R+RE  +   +      + ++++ D++S+ +T++ LES QP EIL+ D    R L L++ + F K+  +R++ + R+Y+DQ KGAE L+R++  +    +   ++V+ A  CL++Y+E I G   A  +++V L   +   +++D +T   LE+   AR    + SL   I+ T+T++G RLLR  IL PS  L T++AR D+V  FL++  +F   LE L  FADLD+MLS LV VPK +T +T+ +G+  V+ L+ T++LL  + E L      M                                        D   ELL++I+ +L+      I+  I  ++   S   +S   M+     AV+  I+G LDVAR T+L +++ I    + Y  ++  A   +  +  RGYHL +P G   ++P+++ Q VK SK ++CTT+ ++SL+ R  E + +   L+  VI  LM+ +R  +  L+A+VESVALLDML  F +LVA S +   Y RP +   G  VI++G HP++  ++   + FVPN + + P++NF V+TG N SGKST L+ TA I +LA +GC+VPA  ARIPLR R+ TR  TSDDME N S+F VEM E A +L   T R+L+L+DELGRGTS +EG AIAW+ CE L+   A T FATH+  L  L+  + N RN  L+A + +                L   +++ S  GPS D +  YGIQMA+ CG     + +A A++  +L T
Sbjct:   43 ITVIAEGRNREVALCCLDLHMPHEMLVSSMVDSRSFVETISLLESYQPVEILMVDAGTPRQLHLEVKKRF-KNSTTRIVAIVRKYYDQSKGAEDLKRVAVNSFDTSLLKNHVVMGAVACLMKYIEFIQGVYIAQKTIKVVLTMASPV-LLMDYATIAALEITRGARNGLIQHSLVAKIDNTRTTIGRRLLRQTILRPSCALETIQARQDVVGVFLNNPSLFFDVLEILPDFADLDKMLSQLVMVPKVITARTSQQGVINVVALKSTLELLPQLHECLSNATSYM----------------------------------------DEPVELLESIITSLRCDEFIVIQESIDRVIDPNSQWNRSVRHMKISGSLAVKAGIDGKLDVARATYLSTIDSINERVEEYQDQFGIA-IKLHFSVGRGYHLLIPNGGARDIPQIFEQRVKFSKSLACTTKDISSLNSRTKECMNDIYQLSYGVINALMDEIRPFVCHLYAMVESVALLDMLLSFTNLVALSPVDQPYCRPQMCPGGNFVIKKGRHPLIEQVVQ-DRPFVPNDVFLDPVTNFNVITGPNCSGKSTYLKTTAIITLLAHMGCYVPATEARIPLRTRIFTRFGTSDDMEENASTFTVEMLELAFILDNLTARSLILIDELGRGTSNDEGLAIAWSACETLMQTKAYTCFATHFHGLRELSTMYANCRNFHLQATNTS--------------TNLLDFKYKLSD-GPS-DRSHGYGIQMAKICGIPASTVRDAEALQETMLST 755          
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: K0TKE2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TKE2_THAOC)

HSP 1 Score: 449 bits (1154), Expect = 3.260e-139
Identity = 307/811 (37.85%), Postives = 448/811 (55.24%), Query Frame = 1
Query:  166 VVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAF---------------------------------HKDD----------ESRVLFVSRQYFDQDKGAELLRRISTKNL-GADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPK------------------AVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEM------------RGLGGG-----AGESTWC---HAHMIGATGHFP-----ADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVP----GDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLV-------QD--------GELVIERGVHPI----VGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPN---GRNL 2259
            VV A+ EN +RETCVA  +    + L IT   + Q+YA+T+A L  L P E+LL++G R+  L+ KIV  F                                  +DD          E+ V F+ R YFDQ KGAELLR+++ +    A +   +I+L+++  +L+Y +   G            C  ++GR     +T + LEL+VNA+      SL G I+ TKTS+G RLLR+N+L+P T L T+ ARLDLV   L  E  F   +EHL    D+D+MLS +   PK                  A++ + A+KGI  ++C++ T+ ++      LE  +++M            +  G G     + EST      A   GAT          +  P   P+A+       +LL+AI+  +K PSL+ +   ++ I TE++   K++  MRHQECFA++P+ +GM+DV RK FL +V+DIY LAD Y + Y +    V+ T+ARGY+L +     G    LP+++IQ VK+ K I CTTE+V SL++RA E + + LL+T+  IQ++++  R + + L ++ +++ALLDM   FAD VA+SRL +TRP L        QD        G L I  G +PI    VGAL +G   +VPN      L NF V+TG NGSGKST L+Q A I VLA  G +VPA+ A IP+RD++ TR+ ++DD E+N+SSFL EM+E A +    T R+L L+DELGR TS E+G AIAWAV E LL++ A+T F THY ++  LA+ +PN   GR+L
Sbjct:  149 VVAAISENLARETCVASLDAGRPTYLHITKQGNGQTYAETLALLRMLNPDEVLLNEGRRNSQLANKIVALFGQAEAEGIQAVVAPNKNGKKGKKQKGRPSRFANQRDDVASLDGSLACETVVKFLPRSYFDQTKGAELLRKLAREGTYDATIVEEFILLSSSFAVLQYTQLCLG------------CGLSRGR-----ATMINLELLVNAKTGRTTNSLVGTIDCTKTSIGGRLLRTNLLAPPTRLDTITARLDLVDSLLDDEEFFYAVMEHLEDLPDVDKMLSYISMTPKKKFGKEGNGALFGQTESQAISAKIASKGISALVCIKSTLSVVPSFAHVLEVQLKDMDQRFNNSAAAKDKRQGDGRIDRDSDESTTVVDSEASRNGATRDSSLKIGLGNESPAKLPVASKQG--RHQLLRAILLAMKQPSLSRVLDAVTDIFTESTSYTKNSHAMRHQECFALKPNTDGMMDVLRKAFLANVDDIYRLADEYAETY-DMNVQVKETSARGYYLSISSADLGVDLALPDVFIQPVKNGKLIHCTTEEVYSLNNRAQENVQDLLLMTHGRIQEVLQVARDNFDCLASLSDAIALLDMCHCFADNVASSRLPWTRPILTDSASDPSQDTEEVTRGGGSLAIRNGRYPIDTSSVGALAEG--EYVPNDTFASSLQNFVVLTGINGSGKSTYLKQVALITVLAHCGSYVPASEASIPIRDQICTRIGSADDQEHNISSFLAEMKETAMICNNTTERSLFLLDELGRATSNEDGVAIAWAVSEFLLTKRAMTFFVTHYPQISKLAEVYPNVQVGRSL 937          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CNW6_9STRA0.000e+0100.00Muts protein 4 n=1 Tax=Tribonema minus TaxID=30337... [more]
D8LJX0_ECTSI1.080e-21449.15MutS protein homolog 4 n=1 Tax=Ectocarpus siliculo... [more]
A0A833WHC0_PHYIN5.180e-14736.72MutS domain V n=1 Tax=Phytophthora infestans TaxID... [more]
W2RE84_PHYPN5.320e-14536.95DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A0P1B012_PLAHL7.230e-14236.40Dna mismatch repair protein n=1 Tax=Plasmopara hal... [more]
A0A1Z5J6Y6_FISSO7.120e-14136.43DNA mismatch repair protein MSH4 n=2 Tax=Fistulife... [more]
A0A6A3YAW5_9STRA9.300e-14138.55DNA mismatch repair protein n=1 Tax=Phytophthora f... [more]
A0A8K1CR11_PYTOL1.410e-14036.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
T0S8L0_SAPDV5.880e-14036.09DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
K0TKE2_THAOC3.260e-13937.85Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_107contigContig_107:527434..534904 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|173837|e_gw1.107.93.1
BRITEko00000,ko03400
KEGG koko:K08740
GOsGO:0000003,GO:0000228,GO:0000280,GO:0000710,GO:0000793,GO:0000794,GO:0000795,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005911,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007129,GO:0007131,GO:0008094,GO:0008150,GO:0008152,GO:0009506,GO:0009987,GO:0010777,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0022607,GO:0030054,GO:0030983,GO:0031974,GO:0031981,GO:0033554,GO:0034641,GO:0035825,GO:0042623,GO:0043073,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045132,GO:0045143,GO:0046483,GO:0048285,GO:0050896,GO:0051026,GO:0051276,GO:0051321,GO:0051716,GO:0055044,GO:0061982,GO:0070013,GO:0070192,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0098813,GO:0099086,GO:0140013,GO:1901360,GO:1901363,GO:1903046
Preferred nameMSH4
Descriptionchiasma assembly
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0249@1|root,KOG0220@2759|Eukaryota
Evalue1.77e-215
Seed ortholog2880.D8LJX0
Hectar predicted targeting categoryother localisation
TranscriptId174159
TrackFilteredModels1
ProteinId173837
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173837gene_11627Tribonema minus UTEX_B_3156 geneContig_107 527434..534904 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|173837Trimin1|173837|e_gw1.107.93.1Tribonema minus UTEX_B_3156 polypeptideContig_107 527434..534904 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11627_12exon_11627_12Tribonema minus UTEX_B_3156 exonContig_107 527434..527931 -
exon_11627_11exon_11627_11Tribonema minus UTEX_B_3156 exonContig_107 528373..528797 -
exon_11627_10exon_11627_10Tribonema minus UTEX_B_3156 exonContig_107 529239..529363 -
exon_11627_9exon_11627_9Tribonema minus UTEX_B_3156 exonContig_107 529695..529912 -
exon_11627_8exon_11627_8Tribonema minus UTEX_B_3156 exonContig_107 530353..530499 -
exon_11627_7exon_11627_7Tribonema minus UTEX_B_3156 exonContig_107 531237..531296 -
exon_11627_6exon_11627_6Tribonema minus UTEX_B_3156 exonContig_107 531853..531988 -
exon_11627_5exon_11627_5Tribonema minus UTEX_B_3156 exonContig_107 532537..532740 -
exon_11627_4exon_11627_4Tribonema minus UTEX_B_3156 exonContig_107 532836..533167 -
exon_11627_3exon_11627_3Tribonema minus UTEX_B_3156 exonContig_107 533572..533807 -
exon_11627_2exon_11627_2Tribonema minus UTEX_B_3156 exonContig_107 534113..534320 -
exon_11627_1exon_11627_1Tribonema minus UTEX_B_3156 exonContig_107 534635..534904 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11627CDS_11627Tribonema minus UTEX_B_3156 CDSContig_107 534635..534904 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11627 ID=mRNA_11627|Name=jgi.p|Trimin1|173837|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2859bp|location=Sequence derived from alignment at Contig_107:527434..534904- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACACCAGCGCCGCGATCAGCCAGGAGAGGCGGCAGGAATGGTGGCCG
TGCATCGGGTGGGCGTGGCACGGGCGGGTCAAGAAGGACGGGCGGCACAG
CTGCAGCTGATGTCCAAACCGCAGATGGCAGCAGTGCGGGAGGCAACTCC
AGCAACAGCGGCCTGGTGGTTTGTGCTGTCGTGGAGAATCGGTCGAGAGA
GACTTGCGTGGCCGTCACCAACACTTCCCATGCCTCTCTACTGGAGATCA
CTACTCTCTCGGACACACAGAGCTACGCGCAGACCATGGCGCACCTCGAG
AGCTTGCAGCCCCAGGAGATACTGCTTCATGACGGTGCACGCAGCAGGGT
GCTCTCGCTCAAGATCGTGGAGGCCTTCCACAAGGACGATGAGAGCAGGG
TCCTCTTCGTCAGCAGGCAGTACTTTGACCAGGATAAGGGTGCAGAGCTG
CTGAGGCGCATTTCTACCAAGAATTTAGGCGCCGATGTCTTCGCAACGTA
CATTGTCCTCGCCGCGACCAACTGCCTGCTGCGCTACGTCGAGAACATCA
CGGGACACGGGCACGCCCCCAACAGCCTGCGCGTCTCGCTGTGCAGCGGC
AACCAGGGGCGCATGGTGATAGACAGGAGCACCGCGCTGGAGCTGGAGCT
CATCGTCAACGCGCGCGCGTTCGACCAGCGCCGCAGCCTCTTTGGCGTCA
TCAACCGCACAAAGACGAGCGTCGGCGCGCGCCTCCTGCGCTCCAACATC
CTGTCGCCGAGCACGGACCTGCCGACGCTGGAGGCGCGCCTCGACCTCGT
GGCGTTCTTCCTGTCGAGCGAGCGCGTCTTCGCGGGCACGCTCGAGCACC
TGAGCCGCTTTGCGGACCTCGACCGCATGCTCAGCGGCCTTGTCACGGTG
CCCAAGGCCGTCACGCCGCAGACCGCGGCCAAGGGCATAGAGACGGTGAT
CTGCCTGCGCCACACGGTGCAGCTGCTCGCGCCGATCGTGGAGACGCTAG
AGGAGGGGATGGAGGAGATGCGGGGGCTGGGGGGGGGCGCGGGTGAAAGT
ACATGGTGTCATGCGCATATGATCGGCGCTACAGGCCATTTTCCTGCTGA
CACTTGGCCCATGACTTCTCCTCTCGCAGCTGGTGACGACGACACTGGCA
GCGAGCTGCTGAAAGCCATCGTGGACAACCTCAAGGACCCCAGCCTGGCA
TGGATAGAGGGGCAGATCAGTGGCATCCTGACGGAGGCAAGCATCACATT
CAAGTCGGCGCTGCAGATGCGGCACCAGGAGTGCTTCGCGGTTCAGCCTG
ACATCAACGGCATGCTGGACGTGGCGCGCAAGACGTTCCTGCAGAGCGTC
GAGGACATATACGCGCTCGCCGATGCGTATACGCAGGAGTACCGTGAGGC
GCCCTGCAGCGTGCGCGCGACAGCAGCGCGCGGCTACCACCTGCAGGTCC
CTGGCGACGTCCCGGAGCTGCCGGAGATGTACATCCAGGCCGTCAAGAGC
AGCAAGTTCATCAGCTGCACCACGGAGCAGGTCGCCTCGCTGTCGGACCG
CGCTAACGAGGCGTTGGGGGAGGCGCTGCTGCTGACCAACCAGGTGATCC
AGGACCTGATGGAGACGGTGCGGAGACACATGGAGTCGCTGTTTGCGGTG
GTGGAGTCCGTCGCGCTGCTGGACATGCTCTTTGGCTTTGCGGACCTCGT
GGCGACCAGCCGCCTGCAGTACACGCGCCCGACGCTCGTGCAGGACGGCG
AGCTTGTCATCGAGCGCGGCGTGCACCCCATCGTCGGCGCGCTGCTCGAC
GGCAGCAAGAGATTCGTGCCCAATGGCATCTCCATGGGACCGCTGTCCAA
CTTCTGCGTGGTGACGGGCGCCAACGGCAGCGGCAAGTCCACGCTGCTGC
GCCAGACGGCGTGCATCGCCGTGCTCGCACAGATAGGCTGCTTCGTCCCC
GCGGCGGCGGCGCGCATCCCCCTGCGCGACCGCCTCCTCACGCGCCTCGC
GACGTCGGACGACATGGAGAACAACCTGAGCTCGTTCCTCGTGGAGATGC
GCGAGGCGGCGCACGTGCTAGGCGCCGCCACGCCGCGCGCGCTCGTCCTC
GTGGACGAGCTCGGTCGCGGCACGAGCACGGAGGAGGGGCGCGCAATCGC
GTGGGCGGTGTGCGAGGCGTTGCTCTCGCGCCCCGCGCTCACGCTCTTCG
CGACGCACTACACGGAGCTGTGCGGCCTCGCGGACACGTGGCCGAACGGG
CGCAACCTGAGCCTGCGCGCGGCGGACGACGCAGGTGCGCCGGTGCGCGT
GCGTGCGAGGAGATGGGGCGTGTGTCGGGGGCTCTTTGGCGTCCGGTTCG
AGAGGAGTCATGCGGGCCCCTCCGCGGATCTCGCCACCGACTACGGCATA
CAGATGGCGGAGCAGTGCGGCTTTCTGCCGGAGCTCATCGCGGAGGCGCG
CGCCGTGCGCCGCCTGCTCCTCGACACGGCGCCCGCGCGCGGCGCGACGT
CGGCAGCCCCAGGCCGCGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGGC
GCGGAGGAGCCGCAGCAGCAGGCCACCGCCGACGCGCTGCGGCTGCTGTC
GCTGCTGGCGGCGGCGCCGGAGATGGAGGCGGGCGCGCTGCGCGAGGCGG
TGGTGGGCGTGTGCGCGCGCGTGGACATGGGGGCCGTGGCGGCGGCTGCG
GCGGAGCTGCGCCCTGGGAGCGGCGGAGGGGGGGGAGCGGGGGAGGGGCC
TGAAGGCGGCGCTGCGCCTGCCGCTGCGACCAAGGGACGCGCAGATGAGG
AGCTCGGTGGGATAGAGCCCTTTACAGAGGACATGCATGGCGTGGCGCCA
GCGCAGTGA
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protein sequence of jgi.p|Trimin1|173837

>Trimin1|173837|e_gw1.107.93.1 ID=Trimin1|173837|e_gw1.107.93.1|Name=jgi.p|Trimin1|173837|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=953bp
MTPAPRSARRGGRNGGRASGGRGTGGSRRTGGTAAADVQTADGSSAGGNS
SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLE
SLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAEL
LRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSG
NQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNI
LSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTV
PKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGES
TWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLA
WIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSV
EDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKS
SKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAV
VESVALLDMLFGFADLVATSRLQYTRPTLVQDGELVIERGVHPIVGALLD
GSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVP
AAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVL
VDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNG
RNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGI
QMAEQCGFLPELIAEARAVRRLLLDTAPARGATSAAPGRGGGSSGGGGGG
AEEPQQQATADALRLLSLLAAAPEMEAGALREAVVGVCARVDMGAVAAAA
AELRPGSGGGGGAGEGPEGGAAPAAATKGRADEELGGIEPFTEDMHGVAP
AQ*
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mRNA from alignment at Contig_107:527434..534904-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11627 ID=mRNA_11627|Name=jgi.p|Trimin1|173837|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7471bp|location=Sequence derived from alignment at Contig_107:527434..534904- (Tribonema minus UTEX_B_3156 )
ATGACACCAGCGCCGCGATCAGCCAGGAGAGGCGGCAGGAATGGTGGCCG TGCATCGGGTGGGCGTGGCACGGGCGGGTCAAGAAGGACGGGCGGCACAG CTGCAGCTGATGTCCAAACCGCAGATGGCAGCAGTGCGGGAGGCAACTCC AGCAACAGCGGCCTGGTGGTTTGTGCTGTCGTGGAGAATCGGTCGAGAGA GACTTGCGTGGCCGTCACCAACACTTCCCATGCCTCTCTACTGGAGATCA CTACTCTCTCGGACACACAGGTACAGAGAACTCGCGAGTGCGCCTTGTTG AAGTTGATGTTGGGATCAGTGGGCAAGCTTGTGAGGGCATTCATATTTCT TTGCGCCTGTGGGTGCAACAAACATCGCCCTACTTTCTGCGCGATTTGCT GCGTCAATCAGTCAGCAGGCACATGCAAACTGGTCTGTGATCAGGTCTGA AGTTGCGTGCCGTGTGCCTGACTCAAAGAGGCCAGCTCTGTCTTCAACTT GTCGTGATAAAATGTGAGCAGTAGATGGGTGATGTCGTTGATGATTTGAT TTGCACTGCTTGCACTGTCGTTGCCCGCTTTCAGAGCTACGCGCAGACCA TGGCGCACCTCGAGAGCTTGCAGCCCCAGGAGATACTGCTTCATGACGGT GCACGCAGCAGGGTGCTCTCGCTCAAGATCGTGGAGGCCTTCCACAAGGA CGATGAGAGCAGGGTCCTCTTCGTCAGCAGGCAGTACTTTGACCAGGATA AGGGTGCAGAGCTGCTGAGGCGCATTTCTACCAAGAATTTAGGTATGGGG CACCCTCTATTGTTGAAACATTGACTGCCTTGAACTTCGTGCATTTTGAT GCTCGGTTTTGTTGGGTCCTTCACAGCGTCAGATTTGATGTTGACCTGCC ATGTGCCTTCAAGGTTCTGGCTGGTACCCGCGGCCTCACCTCACGCTACA GACTCGCCTGGGCTCACGCCGGCGTCGAACCCCATGTCAACGTCTTGGCG CTCGTGCATGCACCACAGCGCCGCTTGCACCCTGCGCCAGACCAACAAGG TGATTGCCGTGCCGCCGCGCACTGCGTGCTGTTTACCCGCTCCGCAGGCG CCGATGTCTTCGCAACGTACATTGTCCTCGCCGCGACCAACTGCCTGCTG CGCTACGTCGAGAACATCACGGGACACGGGCACGCCCCCAACAGCCTGCG CGTCTCGCTGTGCAGCGGCAACCAGGGGCGCATGGTGATAGACAGGAGCA CCGCGCTGGAGCTGGAGCTCATCGTCAACGCGCGCGCGTTCGACCAGCGC CGCAGCCTCTTTGGCGTCATCAACCGCACAAAGGTGAAGTTGTTGTGGGG CGAACGGCGGCGTCTGCTGTGGTACTGTGCATGGTGATGGTCACTCCAGC CGCGCGCAAACCTCAAGAGGTGGTGCTTGCGTTGCCAGCAGGGCCCGGCA GTGGCCTACAGTGGTGTTTGCATGTTCCATCTGTCATTACAGGAACACAG TTGTCCAGTGCACATCAAGAAGACAGTGCATGACAGCTCTCGTCTCATTT CATTTCTTTTGATGACAACGAACTCGTCATTGCAGCTCTACAGCGTTCCA GTGTTTCAGGCGGCTGCCGCTAGCGCTCCCACTTCACCAGCAGTGCACAC GCGCGCGCCTCCCTCCCCACCTCCCCCCCCGCACGCTCGCACCCAATAAC GCTCAACCGCCGCGCACTCCCCGCGCCGCCGCCGCAGACGAGCGTCGGCG CGCGCCTCCTGCGCTCCAACATCCTGTCGCCGAGCACGGACCTGCCGACG CTGGAGGCGCGCCTCGACCTCGTGGCGTTCTTCCTGTCGAGCGAGCGCGT CTTCGCGGGCACGCTCGAGCACCTGAGCCGCTTTGCGGACCTCGACCGCA TGCTCAGCGGCCTTGTCACGGTGCCCAAGGCCGTCACGCCGCAGACCGCG GCCAAGGGCATAGAGACGGTGATCTGCCTGCGCCACACGGTGCAGCTGCT CGCGCCGATCGTGGAGACGCTAGAGGAGGGGATGGAGGAGATGCGGGGGC TGGGGGGGGGCGCGGGTGAGTCCGCGCTTGAAGTTGAAGTTCAGTGCGGA AGTTGCCCGTGTGGCCAGAATCAACGGGGCGCGGTGCCCGATTCAATGGC GCAGTGCGCGATAGAAGTACATGGTGTCATGCGCATATGATCGGCGCTAC AGGCCATTTTCCTGCTGACACTTGGCCCATGACTTCTCCTCTCGCAGCTG GTGACGACGACACTGGCAGCGAGCTGCTGAAAGCCATCGTGGACAACCTC AAGGACCCCAGCCTGGCATGGATAGAGGGGCAGATCAGTGGCATCCTGAC GGAGGCAAGCATCACATTGTTCATTGCGCTTTGCTCTGGCCCGTTGAGGC ACCTTGCAAGCTTGCGCGTGACGCTTCCCTTATGCTGCGCTGAGTCACTG GTCTGATGTACGGCGACAAAGTGGTTTTGCGGTTTGTCAGGTCTTCATGT GAAAATGAGGCGTCAGAACAGTAGACAAACGTACACACAAGGTTGTGACC AAACGAGTTGTTGGCAATGTTTATGTGACTGCTAGTGGCACTGCTGGCCA GTCATTGATGCGGCCCCAGCACCACCCATTGCTGCCAAGTCATCGCGCCT GCTGGCGCACGCAACGCGATGACATGATTCACATATAACGTCAAGGCGTA ACGTCAACGGCATGACCTCGCAGTCACGTGCCTGTTGAGCGTCGTAGCTT GAAAGCTGCTGCTGTGCCCATTGCTGTCACAACGTATTGCTCAGCAGTGG TCCCTCGTGCCGCCCATCCCGCTTCTACACGCACTCTTCATCGCGCCACC TCCACAGCGCCCGCTCCTTACACCATGACTTTCGTCCGCGCTTCCTCCGC AGTCCACCACATTCAGCAAGTCGGCGCTGCAGATGCGGCACCAGGAGTGC TTCGCGGTTCAGCCTGACATCAACGGCATGCTGGACGTGGCGCGCAAGAC GTTCCTGCAGAGCGTCGAGGACATATACGCGCTCGCCGATGCGTATACGC AGGTGCCCACATGCCATTCTCTTGCATACTTAAAAGCGCATCGTATGGCC CGTGAAGAGGGGGCATTGCGCATCCATGTGCCTTGATGGGTTCTGGTTGG TGCGGTGCTGTGGCGGTGGTGGCGTGATGGGGTGTGTGAGCATATGTTGC ATGGAGTAATAAGGCATCGTAGGCTTGGGTTGATGGGTGTGTGCTCGTGT GTCGGCGCGCTGTGCTGCGTCGCACGGTCTGCGCTGCTTGCTCAGGGACG TTCATACGGAGGCGCAACCGCCATCGCCATGTTGCAAAGGGGTTTGCAGT GCGTTCAGGCAGTGAATCACTTTGCCAGACCCTCTGTTGGTCATTGCATT GATCAGCGGATACTTGTGTGCACGCGCGCGCTGCGCAGCACTGCATTGCG CATGTTCATTGTGCTCAGTCTCAATTCACATGCCTAAACATGAGTTGTGG CGTCAGACCAAGCCGTGCCAGCCTGCATCAGTAAGCAACGTGTCAGCCTG CATTATCGAGCGCACAACTTGACTGCTTGACCCTGCTGTTGCGAGCAATG CTGTGCAGGAGTACCGTGAGGCGCCCTGCAGCGTGCGCGCGACAGCAGCG CGCGGCTACCACCTGCAGGTACTTTAAAGTATGCACAAGTGACTGGCTGT ATCTGTGCTGTTATGGTGTACCAGGCGTTACTGCAGCAGCAAAGCAGCAT TCGACAAGCTTTGGGACCTCTGCAATAATGGCCTATTATTTGGACCTGCA GAAGTTACTGTGACACAGCAGCGGCGCCATCAAGAAACTCTTCTTAGCAT ACAGTCGGCACGCCAGCAACAATAGCAATATGCCGAAACTGAGACACCTG CTGCGCATATGCTGGCGTGCGCATTGTCAGTTGTATGAGCCGTGTGTTTG ACTCCACATGAGATCTGCAGTAGTGAGGTTTGGTTGACGACGGGCAGAGC ACACATGCCATTGCACCGTCATAATTTGATGGCGTACAGCCCATAGCATC AATGCAAGCTTCCCATTTGCACTGCCACAGCGCCATCCAGCATAGCATTG CCATTTGCGGTCGGGCACCACTGGCTGGTGTGGCTTAGAGGAACTTTTGT TGCAGATGCAAGCACTGCTACACACTTATCGCAACGTTTATGTGCCAATG TCTTTGGCCATACTACGGCCTCAATTCCTGAGTGCCATATCTGCAGCCAA ACACAGGTCACGCCAATATATGGCGACTCGGCCTCTTCGTAAGCCATTAA CATGTCACCGGCTTCCGTGTATCAACCTGTGCTCGAATCATGCAACACTG CTACATGTAAGCACCAAAGCCTGACCGGATGTGAACAATGGCGTACTGGC AACAGGTCCCTGGCGACGTCCCGGAGCTGCCGGAGATGTACATCCAGGCC GTCAAGAGCAGCAAGTTCATCAGCTGCACCACGGAGCAGGTCGCCTCGCT GTCGGACCGCGCTAACGAGGCGTTGGGGGAGGCGCTGCTGCTGACCAACC AGGTATCCCAATGAGGTGTAGAGCAGGCGTGCATGCCGATTTGTCCCCCA TGGCCACGAAAGAAGCAGCACAATATCGCAAGCATCACAAAGCCCGCGTG CGGTGTCAGATCCGGCATTGCCGTCGCGTCACGCTCCCGCTGGCGACGTC GCAGCACCCGATGGGGCTTGCGGTCCGAGGTCTTGAAGCTTGCTTCGCAT GGTCGCTGAGCGCTGCTGACTTGCTCCTGCTCACCGACTGCCATCTGCAG CGGCAACCCCCCTCACCGCTCATCGCATACGTACATCTCACTTCGTACCC CGCGCCCCGCGACCGCTCATCATATACGTGGTGGAAGGCATTCAGTTTGA CGGCCAAACACACTTGTGCCCCTAGAGCTCGACGATCTTTTGATTCTTCT GTTCTCATACATAAATGCCACTGCGTACCCCGCGCCGCGCAGGTGATCCA GGACCTGATGGAGACGGTGCGGAGACACATGGAGTCGCTGTTTGCGGTGG TGGAGTCCGTCGCGCTGCTGGACATGCTCTTTGGCTTTGCGGACCTCGTG GCGACCAGCCGCCTGCAGTACACGCGCCCGACGCTCGTGCAGGACGGCGA GCTTGTCATCGAGCGCGGCGTGCACCCCATCGTCGGCGCGCTGCTCGACG GCAGCAAGAGGTGCGCGGTGAATACTTCAACGCGCGGTACTTCAACAATG AAGCTGGCGCGCACGCTTGTCTGCGCGTCGCCCGTCGTCAGCGCCTGTGT ATCGCCTCCGGTGGGACGTACCGCGGTGCCCTGGAGCTGGGCGGCTGTGG GCAGTGTGCAGCGTATGCCGTGCCAGCTTACTTGCCTCCTCCGCAGCACA GATGACATGCATCATTATGACGCTTTACTGTTCTGTGATTGCACCCTGTA TGTATGCGCAGTTACGGCACCAGTAGTCATGTCATGTCTGTCATCTTATG GCATCCCCCAACAGCATGCGCCGTGCCCTTCGCTGCTGCAGATTCGTGCC CAATGGCATCTCCATGGGACCGCTGTCCAACTTCTGCGTGGTGACGGGCG CCAACGGCAGCGGCAAGTCCACGCTGCTGCGCCAGACGGCGTGCATCGCC GTGCTCGCACAGATAGGTATGAAGTCAATGGCATCGCCGTGCTGGCATAG TATAGGTGCGCAGTCGATGTCATGCCAATGCAGACGAAAGAGCAGCTGGC GCCGTCCTGTACAAAGCCTGGTCTGCTTGTGCATCAGTCAGAGTGCTGTA ACAGGCCCCATGTGCGCACGCTTGCCTGCCCCTGTGCCTGCATGTACGGC TGATGATGATGCCTGTAGGCTCGTTTGTCATTGTTAGCTTCCTGTGGGCA CTGGCGTCAATGTAAAGGGTGACCGACGCTATGACAGTGCACCTGAGGCA TGCACCGTGTATTATGGTCACAGACTTCACCACCCCTTCATGGAGCAATG TGAATGCTGACAGTGTGTGCGTCCCTTCATACAAACCCATCGAGTCACTC GCCTACACAGCCCCCTAATGCCATGCCCCCCCCCCACCCCCCCACCCCCT GCCGCAGGCTGCTTCGTCCCCGCGGCGGCGGCGCGCATCCCCCTGCGCGA CCGCCTCCTCACGCGCCTCGCGACGTCGGACGACATGGAGAACAACCTGA GCTCGTTCCTCGTGGAGATGCGCGAGGCGGCGCACGTGCTAGGCGCCGCC ACGCCGCGCGCGCTCGTCCTCGTGGACGAGCTCGGTCGCGGCACGAGCAC GGAGGAGGGGCGCGCAATCGCGTGGGCGGTGTGCGAGGCGTTGCTCTCGC GCCCCGCGCTCACGCTCTTCGCGACGCACTACACGGAGCTGTGCGGCCTC GCGGACACGTGGCCGAACGGGCGCAACCTGAGCCTGCGCGCGGCGGACGA CGCAGGTGCGCCGGTGCGCGTGCGTGCGAGGAGATGGGGCGTGTGTCGGG GGCTCTTTGGCGTCCGGTTCGAGAGGAGTCATGTGCTGCCGCGGAGTTGG TCAGTTCACTCCGAAGTGAGCAAGGTTGGCGTATGCACATTCGGTGTCTA GTAGACAGTGCCGGTAGGAATGTATTGAAGTGTTGCAGTTCACTTTCACC AATGCAGATCACGCCGCAGGTCTGATAGGCAGGGGCTCGAGCAGTCACCG CAATCCATCAGCACCTGCACCTCCCCTTGACTGGCTTTCGTGTGCCGCAT GTGCTCTCAGTATCCACAGAAGCAGAGCTGTCGCTTCACGGCGCTGCTGT CATACGGCAACTCCCACCACCTGCGCATTCCCATACGCGCTGCATCAGGG CTGCTGTGAGCCACCCCCTTCTCTCAGCGCACTGCATACGTAGACCTTTA CGCTGACCCTCTCCCCTCACGCACGCCGCGCGCACCCACCGCCCCAGACG GCCGCCGCGCGCACGCGGCCGAGGCGGGCCCCTCCGCGGATCTCGCCACC GACTACGGCATACAGATGGCGGAGCAGTGCGGCTTTCTGCCGGAGCTCAT CGCGGAGGCGCGCGCCGTGCGCCGCCTGCTCCTCGACACGGCGCCCGCGC GCGGCGCGACGTCGGCAGCCCCAGGCCGCGGCGGCGGCAGCAGCGGCGGC GGCGGCGGCGGCGCGGAGGAGCCGCAGCAGCAGGCCACCGCCGACGCGCT GCGGCTGCTGTCGCTGCTGGCGGCGGCGCCGGAGATGGAGGCGGGCGCGC TGCGCGAGGCGGTGGTGGGCGTGTGCGCGCGCGTGGACATGGGGGCCGTG GCGGCGGCTGCGGCGGAGCTGCGCCCTGGGAGCGGCGGAGGGGGGGGAGC GGGGGAGGGGCCTGAAGGCGGCGCTGCGCCTGCCGCTGCGACCAAGGGAC GCGCAGATGAGGAGCTCGGTGGGATAGAGCCCTTTACAGAGGACATGCAT GGCGTGGCGCCAGCGCAGTGA
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Coding sequence (CDS) from alignment at Contig_107:527434..534904-

>mRNA_11627 ID=mRNA_11627|Name=jgi.p|Trimin1|173837|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2859bp|location=Sequence derived from alignment at Contig_107:527434..534904- (Tribonema minus UTEX_B_3156 )
ATGACACCAGCGCCGCGATCAGCCAGGAGAGGCGGCAGGAATGGTGGCCG
TGCATCGGGTGGGCGTGGCACGGGCGGGTCAAGAAGGACGGGCGGCACAG
CTGCAGCTGATGTCCAAACCGCAGATGGCAGCAGTGCGGGAGGCAACTCC
AGCAACAGCGGCCTGGTGGTTTGTGCTGTCGTGGAGAATCGGTCGAGAGA
GACTTGCGTGGCCGTCACCAACACTTCCCATGCCTCTCTACTGGAGATCA
CTACTCTCTCGGACACACAGAGCTACGCGCAGACCATGGCGCACCTCGAG
AGCTTGCAGCCCCAGGAGATACTGCTTCATGACGGTGCACGCAGCAGGGT
GCTCTCGCTCAAGATCGTGGAGGCCTTCCACAAGGACGATGAGAGCAGGG
TCCTCTTCGTCAGCAGGCAGTACTTTGACCAGGATAAGGGTGCAGAGCTG
CTGAGGCGCATTTCTACCAAGAATTTAGGCGCCGATGTCTTCGCAACGTA
CATTGTCCTCGCCGCGACCAACTGCCTGCTGCGCTACGTCGAGAACATCA
CGGGACACGGGCACGCCCCCAACAGCCTGCGCGTCTCGCTGTGCAGCGGC
AACCAGGGGCGCATGGTGATAGACAGGAGCACCGCGCTGGAGCTGGAGCT
CATCGTCAACGCGCGCGCGTTCGACCAGCGCCGCAGCCTCTTTGGCGTCA
TCAACCGCACAAAGACGAGCGTCGGCGCGCGCCTCCTGCGCTCCAACATC
CTGTCGCCGAGCACGGACCTGCCGACGCTGGAGGCGCGCCTCGACCTCGT
GGCGTTCTTCCTGTCGAGCGAGCGCGTCTTCGCGGGCACGCTCGAGCACC
TGAGCCGCTTTGCGGACCTCGACCGCATGCTCAGCGGCCTTGTCACGGTG
CCCAAGGCCGTCACGCCGCAGACCGCGGCCAAGGGCATAGAGACGGTGAT
CTGCCTGCGCCACACGGTGCAGCTGCTCGCGCCGATCGTGGAGACGCTAG
AGGAGGGGATGGAGGAGATGCGGGGGCTGGGGGGGGGCGCGGGTGAAAGT
ACATGGTGTCATGCGCATATGATCGGCGCTACAGGCCATTTTCCTGCTGA
CACTTGGCCCATGACTTCTCCTCTCGCAGCTGGTGACGACGACACTGGCA
GCGAGCTGCTGAAAGCCATCGTGGACAACCTCAAGGACCCCAGCCTGGCA
TGGATAGAGGGGCAGATCAGTGGCATCCTGACGGAGGCAAGCATCACATT
CAAGTCGGCGCTGCAGATGCGGCACCAGGAGTGCTTCGCGGTTCAGCCTG
ACATCAACGGCATGCTGGACGTGGCGCGCAAGACGTTCCTGCAGAGCGTC
GAGGACATATACGCGCTCGCCGATGCGTATACGCAGGAGTACCGTGAGGC
GCCCTGCAGCGTGCGCGCGACAGCAGCGCGCGGCTACCACCTGCAGGTCC
CTGGCGACGTCCCGGAGCTGCCGGAGATGTACATCCAGGCCGTCAAGAGC
AGCAAGTTCATCAGCTGCACCACGGAGCAGGTCGCCTCGCTGTCGGACCG
CGCTAACGAGGCGTTGGGGGAGGCGCTGCTGCTGACCAACCAGGTGATCC
AGGACCTGATGGAGACGGTGCGGAGACACATGGAGTCGCTGTTTGCGGTG
GTGGAGTCCGTCGCGCTGCTGGACATGCTCTTTGGCTTTGCGGACCTCGT
GGCGACCAGCCGCCTGCAGTACACGCGCCCGACGCTCGTGCAGGACGGCG
AGCTTGTCATCGAGCGCGGCGTGCACCCCATCGTCGGCGCGCTGCTCGAC
GGCAGCAAGAGATTCGTGCCCAATGGCATCTCCATGGGACCGCTGTCCAA
CTTCTGCGTGGTGACGGGCGCCAACGGCAGCGGCAAGTCCACGCTGCTGC
GCCAGACGGCGTGCATCGCCGTGCTCGCACAGATAGGCTGCTTCGTCCCC
GCGGCGGCGGCGCGCATCCCCCTGCGCGACCGCCTCCTCACGCGCCTCGC
GACGTCGGACGACATGGAGAACAACCTGAGCTCGTTCCTCGTGGAGATGC
GCGAGGCGGCGCACGTGCTAGGCGCCGCCACGCCGCGCGCGCTCGTCCTC
GTGGACGAGCTCGGTCGCGGCACGAGCACGGAGGAGGGGCGCGCAATCGC
GTGGGCGGTGTGCGAGGCGTTGCTCTCGCGCCCCGCGCTCACGCTCTTCG
CGACGCACTACACGGAGCTGTGCGGCCTCGCGGACACGTGGCCGAACGGG
CGCAACCTGAGCCTGCGCGCGGCGGACGACGCAGGTGCGCCGGTGCGCGT
GCGTGCGAGGAGATGGGGCGTGTGTCGGGGGCTCTTTGGCGTCCGGTTCG
AGAGGAGTCATGCGGGCCCCTCCGCGGATCTCGCCACCGACTACGGCATA
CAGATGGCGGAGCAGTGCGGCTTTCTGCCGGAGCTCATCGCGGAGGCGCG
CGCCGTGCGCCGCCTGCTCCTCGACACGGCGCCCGCGCGCGGCGCGACGT
CGGCAGCCCCAGGCCGCGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGGC
GCGGAGGAGCCGCAGCAGCAGGCCACCGCCGACGCGCTGCGGCTGCTGTC
GCTGCTGGCGGCGGCGCCGGAGATGGAGGCGGGCGCGCTGCGCGAGGCGG
TGGTGGGCGTGTGCGCGCGCGTGGACATGGGGGCCGTGGCGGCGGCTGCG
GCGGAGCTGCGCCCTGGGAGCGGCGGAGGGGGGGGAGCGGGGGAGGGGCC
TGAAGGCGGCGCTGCGCCTGCCGCTGCGACCAAGGGACGCGCAGATGAGG
AGCTCGGTGGGATAGAGCCCTTTACAGAGGACATGCATGGCGTGGCGCCA
GCGCAGTGA
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