mRNA_11627 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A836CNW6_9STRA (Muts protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNW6_9STRA) HSP 1 Score: 1695 bits (4390), Expect = 0.000e+0 Identity = 952/952 (100.00%), Postives = 952/952 (100.00%), Query Frame = 1 Query: 1 MTPAPRSARRGGRNGGRASXGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEARAVRRLLLDTAPARGATSAAPGRGXXXXXXXXXXXXXXXXXATADALRLLSLLAAAPEMEAGALREAVVGVCARVDMGAVAAAAAELRPGXXXXXXXXXXPEGGAAPAAATKGRADEELGGIEPFTEDMHGVAPAQ 2856 MTPAPRSARRGGRNGGRASXGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEARAVRRLLLDTAPARGATSAAPGRGXXXXXXXXXXXXXXXXXATADALRLLSLLAAAPEMEAGALREAVVGVCARVDMGAVAAAAAELRPGXXXXXXXXXXPEGGAAPAAATKGRADEELGGIEPFTEDMHGVAPAQ Sbjct: 1 MTPAPRSARRGGRNGGRASXGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEARAVRRLLLDTAPARGATSAAPGRGXXXXXXXXXXXXXXXXXATADALRLLSLLAAAPEMEAGALREAVVGVCARVDMGAVAAAAAELRPGXXXXXXXXXXPEGGAAPAAATKGRADEELGGIEPFTEDMHGVAPAQ 952
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: D8LJX0_ECTSI (MutS protein homolog 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX0_ECTSI) HSP 1 Score: 644 bits (1661), Expect = 1.080e-214 Identity = 377/767 (49.15%), Postives = 494/767 (64.41%), Query Frame = 1 Query: 220 NTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDES--RVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEM-------RGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRH-MESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEARAVRRLLLDTAPAR 2490 NT+++S+++++ + D+QSYA+T+A L+ + P EILLHDG R RVL+ K+V AFH+ ++S RVLFVSRQYFDQDKGAELL+R+++ ++ AD+ + Y LAA+ CL+RYVEN TG A SLRV SG G M IDRSTA ELELI +AR+ Q++SLFGVIN T+T+VGARLLRS IL P TD+ T+E RLDLV FFL+ E VF TL+ L F DLDRMLS LVTVPK VTP TA + I T+ICLRHT++L+AP+V+ LEEG+ E R GGG GE + ATG ++ +LT+++ ++ +RH+ECFAV+ D++GMLDVAR TFLQS+EDIY ADA T+E+ V + +RGYHL +P V +LP IQAV+++K I+CTTE+V+SLSDRANEA+ ALL+T+ VIQ L + +R +++LFAV ESVALLDM+FGFADLV S L + RP + DG + I G HPIVGA+ + K FVPN M P NF VVTG N SGKST L+Q I ++AQ+GC+VPA A IP+R LL+R+ T DD+ENN+S+FL+EMRE A V+ +DELGRGTS EG A+AWAV E LLS A TLF THY+++ GLAD +PN N+ L+ A A G R+ D YGI+ AE CG E++ EAR +R ++D A+ Sbjct: 2 NTANSSVIQVSWVQDSQSYAKTLAALQGVDPDEILLHDGTRGRVLASKVVGAFHQIEKSCCRVLFVSRQYFDQDKGAELLKRLASGSVDADLMSKYTALAASYCLIRYVENSTGSTFADASLRVRTDSGGDGSMYIDRSTAKELELITDARSGGQKKSLFGVINHTRTAVGARLLRSTILGPCTDIATIEERLDLVTFFLTMEGVFNSTLKVLGEFTDLDRMLSDLVTVPKQVTPVTAGRSIATLICLRHTLRLMAPLVQALEEGVRESGQQSTARRDGGGGEGEYDERFHNGDDATGXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXERLDSVLTDSTSYTRNPAALRHEECFAVRADVDGMLDVARTTFLQSMEDIYRAADAMTEEH-SYQVKVSCSVSRGYHLIIPAGV-DLPPGLIQAVQNTKTIACTTEEVSSLSDRANEAVRTALLITHDVIQTLADEIRTEALDALFAVTESVALLDMIFGFADLVTLSPLAFCRPEVTADGPMSIRGGRHPIVGAVQEDWK-FVPNDTYMSPFINFRVVTGPNNSGKSTYLKQAGLIVLMAQMGCYVPAEMAVIPVRTSLLSRIGTGDDLENNVSTFLMEMREIAQVM----------IDELGRGTSNREGLAVAWAVAEKLLSSSAYTLFVTHYSQMPGLADLYPNVENIHLQTALAPAAAXXXXXXXXXXQTGAL--RYLHKALDGRCDPGDGYGIRTAEMCGLPWEIVEEARVLRTQVIDATKAK 751
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A833WHC0_PHYIN (MutS domain V n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WHC0_PHYIN) HSP 1 Score: 466 bits (1199), Expect = 5.180e-147 Identity = 289/787 (36.72%), Postives = 446/787 (56.67%), Query Frame = 1 Query: 151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEA-RAVRRLLLDTAPARGATS 2502 + + ++ AV ENR+RE + + L + T+ D+ SY T+A L++ QP EIL+ + + ++ +I + F D R++ V+R+YFDQ KGAE ++R+ N+ ++ Y+ +A+ C+++Y+E I G A +S++V L S + ++++D++T LEL+ R S++ ++N +TS G RLLRS IL P+ L T++AR +++ FL + F E L F DLDR+LS LV VPK +TP+ + I +VI L+HT+ L +V +LE ++ D LL +++ +L+D A I+ I ++ + + A Q R QECFAV+ ++GMLDVAR+T+L ++E I+ + Y +E P + TA RGYHL +P +V +LP +I+ V + I C+T + SL+ R NEAL L+N VIQ L++ VR ++ A+VES+ALLDML F ++VA S YTRPT+ + G ++I++G HP+V +L + ++P+ P+S F +VTG N +GKST LR TA I ++AQ+GC+VPA+ A IP+RDR+ TR TSDDME N S+F VEM E A +L A+TP++L+L+DELGRGTS +EG AIAW++ E ++ R + T FATHY +L LA +P R + + + + R+ + G F PS + YGI+ A CG ELI EA R +L D A AT+ Sbjct: 58 TRASFLIAAVAENRAREIGICAIDLVSPHELLLWTIIDSHSYVDTIALLKAYQPVEILVVETFKPHKINEEISKRFTGSD-CRIVPVARKYFDQTKGAEDIKRVMANNVDINIGRNYVAMASVACIMKYIEYIQGVYIAESSMKVVL-SPSTRKLLMDQATISSLELVQGTRGRKDNLSVYKMLNNAQTSAGNRLLRSTILQPTRHLKTIQARQEVIGIFLDNPAWFFDVQEELRGFVDLDRLLSQLVFVPKVITPRVSRIAIGSVIALKHTLDCLPRLVTSLETTSIKL----------------------------------------DRPCPLLNSVIQSLRDERFAGIKKDIERVVNDRVKICQPAAQKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEIVHMY-KENLGIPMRLNYTARRGYHLAIPVNVKDLPASFIERVAAKTVICCSTRALVSLNVRLNEALTAVYKLSNDVIQQLLDKVRPRASTMHAMVESIALLDMLLSFVNVVALSPPDQPYTRPTVTEHGNMIIKKGRHPLVERVLK-DQAYIPSNSFFDPVSTFHIVTGPNCAGKSTYLRATALITIMAQMGCYVPASEAIIPIRDRICTRFGTSDDMEENASTFAVEMTETAFILEASTPKSLILIDELGRGTSNDEGAAIAWSIAEEIIDRGSYTCFATHYHQLNRLAQMYPRCRCYHMGTESNTSSV----SFRYILKDGPF----------PSTGM---YGIKTAALCGLPAELIREAERTYEKLRSDREAAETATN 783
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: W2RE84_PHYPN (DNA_MISMATCH_REPAIR_2 domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2RE84_PHYPN) HSP 1 Score: 461 bits (1186), Expect = 5.320e-145 Identity = 286/774 (36.95%), Postives = 442/774 (57.11%), Query Frame = 1 Query: 151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTL------EARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEA 2448 S S ++ AV ENR+RE + + L + T+ D+ SY T+A L++ QP E+L+ + ++S ++ +I + F + RV+ ++R+YFDQ KGAE ++R+ N+ ++ Y+V+A+ C+++Y+E I G A S++V L S + ++++D++T LEL+ R + +SL ++N T+TS G RLLRS +L P+ L T+ +AR ++V FL + F +E LS F DLDR+L+ LV VPK +TP+ + I +VI L+HT++ L +V +LE ++ D LL +++ +L+D WI+ I ++ + SA Q R QECFAV+ ++GMLDVAR+T+L ++E I+ + Y +E P + TA RGYHL VP + +LP +I+ V + I C+T+ + SL+ R EAL L+N VIQ L++ +R ++ A+VES+ALLDML F ++VA S YTRP + + G ++I++G HP+V +L + ++P+ PLS F ++TG N +GKST LR TA I ++AQ+GC+VPA+ A IP+RDR+ TR TSDDME N S+F VEM E A +L A T ++LVL+DELGRGT+ +EG AIAW++ E L+ R + T FATHY +L LA +P R + + + V R + + G F PS+ + YGI+ A Q G ELI EA Sbjct: 60 SRSSFLIAAVAENRAREIGICAIDLVSPYELLLWTVIDSHSYVDTVALLKAYQPVEVLVVETSKSGKVNEEISKRF-TGSKCRVVPLARKYFDQTKGAEDIKRVMANNVDINIGRNYVVMASVACVMKYIEYIQGVYIAEKSMKVVL-SPSTRKLLMDQATVSSLELVQGTRGRNDNQSLCKMLNNTQTSAGNRLLRSTMLQPTCHLKTMYPSAYNQARQEVVGIFLDNPAWFFDVMEELSGFVDLDRLLNQLVFVPKVITPRVSRIAIGSVIALKHTLECLPRLVSSLETTSIKL----------------------------------------DQPCPLLDSVIQSLRDEQFTWIKEDIERVVNDRVKVCTSAAQKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHMY-KENLGIPIRINYTARRGYHLAVPVNAKDLPASFIERVTTKTVICCSTKALVSLNVRLKEALTAVYKLSNDVIQQLLDKIRPRASTMHAMVESIALLDMLLSFVNVVALSPPDQPYTRPIVTEHGNMIIKKGRHPLVERVLK-DRAYIPSDSFFDPLSTFHIITGPNCAGKSTYLRATALITIMAQMGCYVPASEASIPIRDRICTRFGTSDDMEENASTFAVEMTETAFILEACTSKSLVLIDELGRGTANDEGAAIAWSIGEELIERGSYTCFATHYHQLNRLAQLYPRCRCYHMGTESNTNS-VHFR---YVLKDGPF----------PSSGM---YGIKTAAQSGLPAELIREA 772
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A0P1B012_PLAHL (Dna mismatch repair protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B012_PLAHL) HSP 1 Score: 452 bits (1164), Expect = 7.230e-142 Identity = 281/772 (36.40%), Postives = 433/772 (56.09%), Query Frame = 1 Query: 151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFE-RSHAGPSADLATDYGIQMAEQCGFLPELIAEARAV 2457 + S ++ AV ENR+RE + + L + T+ D+ SY ++ L++ QP EIL+ + ++++ ++ +I + F RV+ ++R+YFDQ KGAE ++R+ ++ ++ Y+ +A+ C+++Y+E I G A S+++ + S + ++++D++T LEL+ A+ +SL ++N T+TS G RLLRS IL P+ L T+ AR ++V FL + + +E L F DLDR+LS LV VPKA+TP+ + I +VI L+H + L +V LE ++ D LL +I+ L+D I+ I ++ + +SA Q R QECFAV+ ++GMLDVAR+T+L ++E I+ + Y +E P + TA RGYHL VP ++ ELP +I+ V + I C+T+ + SL+ R EA+ L+N VIQ L++ +R ++ A+VES+ALLDML F ++VA S YTRPT+ + G +I++G HP+V +L +R++P+ P S F +VTG N +GKST LR TA I ++AQ+GC+VPA+ A IP+RDR+ TR TSDDME N SSF VEM E A +L T R+LVL+DELGRGT+ +EG AIAW++ E L+ R A T FATHY +L L+ +P R + A G+ F R+ + PS D+ YGI+ A G LI EA + Sbjct: 57 ARSSFLIAAVAENRAREIGICAIDLVSPYELLLWTVIDSHSYVNALSLLKAYQPVEILVTETSKAKKVNEEICKNF-AGSSCRVVPLARKYFDQTKGAEDIKRVMANSVDINIGRNYVAMASVACVMKYIEYIQGVYIAEKSMKIVI-SPSICKLLMDQATISSLELVQGAQGRKDNQSLCKMLNNTQTSAGNRLLRSTILQPTCHLKTIHARHEVVGVFLDNPAWYFDVMEELREFVDLDRLLSQLVFVPKAITPRASRIAIGSVIALKHMLDCLPKMVSCLEAASVKL----------------------------------------DQPCTLLDSIIVILRDEQFTGIKADIERVVNDRVKVCRSAAQKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHTY-KENIGFPIRLNYTARRGYHLAVPVNIKELPSSFIERVTNRNVICCSTKVLVSLNVRLTEAVTAVYKLSNDVIQQLLDKIRPRASAMHAMVESIALLDMLLSFVNVVALSPPDRPYTRPTVTEHGNFIIKKGRHPLVECVLK-DRRYIPSDTFFDPSSTFHLVTGPNCAGKSTYLRATALITIMAQMGCYVPASDAAIPIRDRICTRFGTSDDMEENASSFAVEMTETAFILETCTSRSLVLIDELGRGTANDEGAAIAWSIGEELIQRGAFTCFATHYHQLNYLSQLYPRCRCYHMGA---------------GITTNSFHFRYVLKDGPFPSTDM---YGIKTAALSGLPTGLIREAEEI 766
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A1Z5J6Y6_FISSO (DNA mismatch repair protein MSH4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6Y6_FISSO) HSP 1 Score: 456 bits (1174), Expect = 7.120e-141 Identity = 286/785 (36.43%), Postives = 447/785 (56.94%), Query Frame = 1 Query: 151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESR--VLFVSRQYFDQDKGAELLRRISTKNL-GADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTP----------QTAAKGIETVICLRHTVQLLAPIVETLEEGMEEM-RGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDV-PELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLVQ----DGE-------LVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPN-GRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGF 2424 S+ VVCA+ EN +RETC A + S + L +T + QSYA+T+A LE L+P EILL++G + L+ KI+E FH ++ V F+SR +FDQ +GAELLRR+S + + YI+L++ + +L Y + G A NSL +S+ +G RM +DRS+ L+LEL+VNA+ SL G I+RTKT+VG+RLLRSN++SPS+ + T++ RL+LV FL F ++HL+ D+D+MLS + +PK + + A++GI ++ ++ T+ L + L +E + R G T D + L + LL+A+V + P L + ++ I TE + ++ MRH+ECFA++ D ++ V R+TFL++V+DI+ AD Y + Y VR T+ RGY L VP ++ +LP +++Q K+ +FI+CTTE++ASL+ RA + + + LL+T+ IQ++++ R + L A+ ++VALLDM FAD V + ++RP + + D E VI G PIV A D K FV N +++G NGSGKST L+Q A I +LAQ G +VPA A +P+RD+L R+ +DD E+N+S+F+ EM+E A + + R+LVLVDELGR TS E+G AIAWA CE LL + ++T F +HY +L +A+T+P +N+ L A+ + +R+ + +++ DYG+++A CG+ Sbjct: 113 SSPAHVVCAISENLARETCAASLDVSSPTQLHVTKQGNGQSYAETLACLEILRPHEILLNEGRSNSPLARKILETFHTENGEGCVVKFISRSFFDQTRGAELLRRVSRADTYDLTIVEEYILLSSVHAVLHYTQTNLGGSFARNSLFLSVNAGGLHRMTVDRSSILQLELLVNAKTAKVADSLIGCIDRTKTTVGSRLLRSNLMSPSSSIGTIQTRLELVDIFLGDADFFFEIMDHLTALPDVDKMLSNIAFIPKDIKEDPAVNIVQRRKVASRGISALVSIKTTLSSLPSLALALNSHLETLVRRFG-----ETERDQQQDDDLRTIRTDRSTLMVGLGGMGEVQRFHLLRAVVFTVSQPELDEVLQAVNAIFTEHTHFTRNNHAMRHKECFALKCDEADLMAVLRQTFLRNVDDIHKKADEYAEIYN-FHVQVRYTSVRGYFLAVPAEIGSDLPAVFLQPAKAGRFITCTTEEIASLNARATDNIQDLLLMTHDRIQEVIDYARARYDPLAALCDAVALLDMCHSFADHVTLVKTPWSRPVVFERFREDDESSDATNAFVIRNGHFPIVVAGED--KAFVANDTYAPASKPLTIISGINGSGKSTYLKQIAIITILAQCGSYVPAERASVPIRDQLCCRIGNTDDQEHNISTFMQEMKETAFICNNSNTRSLVLVDELGRATSNEDGVAIAWATCEYLLKKQSITFFVSHYPQLTCMAETYPQLVQNVHLSASVGQATGE----------NDIGEIRYTHKVQPGACNVSADYGVELAAHCGW 879
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A6A3YAW5_9STRA (DNA mismatch repair protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YAW5_9STRA) HSP 1 Score: 461 bits (1186), Expect = 9.300e-141 Identity = 271/703 (38.55%), Postives = 412/703 (58.61%), Query Frame = 1 Query: 151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGR 2253 S S ++ AV ENR+RE + + L + T+ D+ SY TM+ L++ QP EIL+ + ++SR ++ +I + F RV+ ++R+YFDQ KGAE ++R+ N+ ++ Y+ +A+ C+++Y+E I G A +++V L S + ++++D +T LEL+ R + +SL ++N T+TS G RLLRS +L P+ L T++AR ++V FL + F +E L F DLDR+LS LV VPK +TP+ + I +VI L+HT++ L +V LE ++ D LL +I+ +L+D I+ I ++ + +SA + R QECFAV+ ++GMLDVAR+T+L ++E I+ + Y +E P + T+ RGYHL VP + +L +I+ V + I C+T+ + SL+ R NEAL L+N VIQ L++ +R ++ A+VESVALLDML F ++VA S YT+PT+ + G LVI++G HP+V +L + ++P+ PLS F +VTG N +GKST LR A I +LAQ+GC+VPA+ A IP+RDR+ TR TSDDME N SSF VEM E A +L T R+LVL+DELGRGT+ +EG AIAW++ E ++ R + T FATHY +L LA +P R Sbjct: 480 SRSSFLIAAVAENRAREIGICAIDLVSPYELLLWTVIDSHSYVDTMSLLQAYQPVEILVVETSKSRKINDEIAKRF-SGSNCRVVPLARKYFDQTKGAEDIKRVMANNVDINIGRNYVAMASVACVMKYIEYIQGVYIAEKTMKVVL-SPSTRKLLMDHATVSALELVQGTRGRNDSQSLSRMLNNTQTSAGNRLLRSTMLQPTCHLKTIQARQEVVGIFLDNPAWFFDVMEELRDFVDLDRLLSQLVFVPKVITPRVSRIAIGSVIALKHTLECLPKLVSCLETTSVQL----------------------------------------DRPCPLLDSIIQSLRDEQFTGIKADIERVVNDRVKVCRSAARKRIQECFAVRAGVDGMLDVARRTYLDTIEKIHEVVHTY-KENLGIPIRLNYTSRRGYHLAVPVNCNDLSACFIERVATKSVICCSTKALVSLNVRLNEALTAVYKLSNDVIQQLLDKIRPRASTMHAMVESVALLDMLLSFVNVVALSPPDQPYTKPTITEHGNLVIKKGRHPLVERVLK-DRTYIPSDTFFDPLSTFHIVTGPNCAGKSTYLRAMALITILAQMGCYVPASEATIPIRDRICTRFGTSDDMEENASSFAVEMTETAFILETCTSRSLVLIDELGRGTANDEGAAIAWSISEEMIQRGSYTCFATHYHQLNRLAQLYPRCR 1138
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: A0A8K1CR11_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR11_PYTOL) HSP 1 Score: 449 bits (1155), Expect = 1.410e-140 Identity = 281/768 (36.59%), Postives = 422/768 (54.95%), Query Frame = 1 Query: 151 SNSGLVVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVPGDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEA 2448 S S ++ AV ENR+RE + + + L + + D+QSYA+T+ L+ QP EIL+ + A+ + ++ I +A + SR++ V R+YFDQ KGAE LRR+ + ++ Y+V+AA +C+L+YVE I G A +++V L + + ++++D++T LEL+ +R R+SL+G++N TKTS G RLLRS +L P L T++ R D V FL + F LE L FAD++R+LS LV PK +TP+ + I VI L+H ++ L + + L E +D ELL + +++ I+ I ++ E SA Q R QECFAV+ I+GMLDVAR+T+L ++E I+ L + E P + ++ RGYHL +P + ++P + ++ V + K I C+T+++ SL+ R EAL L+N VIQ+L+ +R L+A+VE +ALLDML F ++VA S Y P + + G LVI+ G HP+V ++ + F+PN GP S F V+TGAN +GKST ++ A I +LA +GC VPA A IPL DR+ TR TSDDME N S+F VEM E + +L T R+LVL+DELGRGT+ +EG+AIAW+V E L+ R + T FATHY + LA + N R L G G + F ++ YGI A+ CG P++I++A Sbjct: 56 SRSSFLIAAVAENRAREVGICAVDLAAPYELLLWNVIDSQSYAETLTLLQVYQPVEILVVETAKPQHVNDAINKASIRST-SRIVPVGRKYFDQTKGAEDLRRVMANRIDVNISRNYVVMAAVSCMLQYVEFIQGVFIAEKTMKVVL-NPSSNKLLLDQATITSLELVRCSRGDSTRQSLWGILNNTKTSAGNRLLRSTMLQPLRHLKTIQNRQDAVEIFLKNPGWFFDLLEELPNFADIERILSQLVMAPKVITPRVSRLAIGNVIALKHALECLPSLYQCLTSSHTE----------------------------------------NDQSCELLSTLYSSVRPELFEDIQRDIGLVINERVKVSHSAAQKRIQECFAVRAGIDGMLDVARRTYLDTIEKIHELVHKFKGSM-EVPVRLSYSSRRGYHLVLPCNAKDIPSLIVERVPTKKAIYCSTKELKSLNGRLEEALMAVYKLSNNVIQNLLNKIRPRATVLYAMVEGIALLDMLLSFTNVVAASPPDRPYVCPRVSECGSLVIKDGRHPLVERVMQ-DQDFIPNNTFFGPTSTFHVITGANCAGKSTYMKAVALITILAHMGCHVPATDAFIPLCDRICTRFGTSDDMEENASTFAVEMTETSFILETCTSRSLVLIDELGRGTANDEGQAIAWSVSEELIKRRSYTCFATHYHRMNALAKLYVNCRCYHL-----------------GAVPGQNHILFRYKLCDGGLSMSVKYGIITAKICGIPPDVISQA 762
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: T0S8L0_SAPDV (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S8L0_SAPDV) HSP 1 Score: 447 bits (1149), Expect = 5.880e-140 Identity = 279/773 (36.09%), Postives = 433/773 (56.02%), Query Frame = 1 Query: 169 VCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAFHKDDESRVLFVSRQYFDQDKGAELLRRISTKNLGADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPKAVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEMRGLGGGAGESTWCHAHMIGATGHFPADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVP-GDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQ--YTRPTLVQDGELVIERGVHPIVGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPNGRNLSLRAADDAGAPVRVRARRWGVCRGLFGVRFERSHAGPSADLATDYGIQMAEQCGFLPELIAEARAVRRLLLDT 2478 + + E R+RE + + + ++++ D++S+ +T++ LES QP EIL+ D R L L++ + F K+ +R++ + R+Y+DQ KGAE L+R++ + + ++V+ A CL++Y+E I G A +++V L + +++D +T LE+ AR + SL I+ T+T++G RLLR IL PS L T++AR D+V FL++ +F LE L FADLD+MLS LV VPK +T +T+ +G+ V+ L+ T++LL + E L M D ELL++I+ +L+ I+ I ++ S +S M+ AV+ I+G LDVAR T+L +++ I + Y ++ A + + RGYHL +P G ++P+++ Q VK SK ++CTT+ ++SL+ R E + + L+ VI LM+ +R + L+A+VESVALLDML F +LVA S + Y RP + G VI++G HP++ ++ + FVPN + + P++NF V+TG N SGKST L+ TA I +LA +GC+VPA ARIPLR R+ TR TSDDME N S+F VEM E A +L T R+L+L+DELGRGTS +EG AIAW+ CE L+ A T FATH+ L L+ + N RN L+A + + L +++ S GPS D + YGIQMA+ CG + +A A++ +L T Sbjct: 43 ITVIAEGRNREVALCCLDLHMPHEMLVSSMVDSRSFVETISLLESYQPVEILMVDAGTPRQLHLEVKKRF-KNSTTRIVAIVRKYYDQSKGAEDLKRVAVNSFDTSLLKNHVVMGAVACLMKYIEFIQGVYIAQKTIKVVLTMASPV-LLMDYATIAALEITRGARNGLIQHSLVAKIDNTRTTIGRRLLRQTILRPSCALETIQARQDVVGVFLNNPSLFFDVLEILPDFADLDKMLSQLVMVPKVITARTSQQGVINVVALKSTLELLPQLHECLSNATSYM----------------------------------------DEPVELLESIITSLRCDEFIVIQESIDRVIDPNSQWNRSVRHMKISGSLAVKAGIDGKLDVARATYLSTIDSINERVEEYQDQFGIA-IKLHFSVGRGYHLLIPNGGARDIPQIFEQRVKFSKSLACTTKDISSLNSRTKECMNDIYQLSYGVINALMDEIRPFVCHLYAMVESVALLDMLLSFTNLVALSPVDQPYCRPQMCPGGNFVIKKGRHPLIEQVVQ-DRPFVPNDVFLDPVTNFNVITGPNCSGKSTYLKTTAIITLLAHMGCYVPATEARIPLRTRIFTRFGTSDDMEENASTFTVEMLELAFILDNLTARSLILIDELGRGTSNDEGLAIAWSACETLMQTKAYTCFATHFHGLRELSTMYANCRNFHLQATNTS--------------TNLLDFKYKLSD-GPS-DRSHGYGIQMAKICGIPASTVRDAEALQETMLST 755
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Match: K0TKE2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TKE2_THAOC) HSP 1 Score: 449 bits (1154), Expect = 3.260e-139 Identity = 307/811 (37.85%), Postives = 448/811 (55.24%), Query Frame = 1 Query: 166 VVCAVVENRSRETCVAVTNTSHASLLEITTLSDTQSYAQTMAHLESLQPQEILLHDGARSRVLSLKIVEAF---------------------------------HKDD----------ESRVLFVSRQYFDQDKGAELLRRISTKNL-GADVFATYIVLAATNCLLRYVENITGHGHAPNSLRVSLCSGNQGRMVIDRSTALELELIVNARAFDQRRSLFGVINRTKTSVGARLLRSNILSPSTDLPTLEARLDLVAFFLSSERVFAGTLEHLSRFADLDRMLSGLVTVPK------------------AVTPQTAAKGIETVICLRHTVQLLAPIVETLEEGMEEM------------RGLGGG-----AGESTWC---HAHMIGATGHFP-----ADTWPMTSPLAAGDDDTGSELLKAIVDNLKDPSLAWIEGQISGILTEASITFKSALQMRHQECFAVQPDINGMLDVARKTFLQSVEDIYALADAYTQEYREAPCSVRATAARGYHLQVP----GDVPELPEMYIQAVKSSKFISCTTEQVASLSDRANEALGEALLLTNQVIQDLMETVRRHMESLFAVVESVALLDMLFGFADLVATSRLQYTRPTLV-------QD--------GELVIERGVHPI----VGALLDGSKRFVPNGISMGPLSNFCVVTGANGSGKSTLLRQTACIAVLAQIGCFVPAAAARIPLRDRLLTRLATSDDMENNLSSFLVEMREAAHVLGAATPRALVLVDELGRGTSTEEGRAIAWAVCEALLSRPALTLFATHYTELCGLADTWPN---GRNL 2259 VV A+ EN +RETCVA + + L IT + Q+YA+T+A L L P E+LL++G R+ L+ KIV F +DD E+ V F+ R YFDQ KGAELLR+++ + A + +I+L+++ +L+Y + G C ++GR +T + LEL+VNA+ SL G I+ TKTS+G RLLR+N+L+P T L T+ ARLDLV L E F +EHL D+D+MLS + PK A++ + A+KGI ++C++ T+ ++ LE +++M + G G + EST A GAT + P P+A+ +LL+AI+ +K PSL+ + ++ I TE++ K++ MRHQECFA++P+ +GM+DV RK FL +V+DIY LAD Y + Y + V+ T+ARGY+L + G LP+++IQ VK+ K I CTTE+V SL++RA E + + LL+T+ IQ++++ R + + L ++ +++ALLDM FAD VA+SRL +TRP L QD G L I G +PI VGAL +G +VPN L NF V+TG NGSGKST L+Q A I VLA G +VPA+ A IP+RD++ TR+ ++DD E+N+SSFL EM+E A + T R+L L+DELGR TS E+G AIAWAV E LL++ A+T F THY ++ LA+ +PN GR+L Sbjct: 149 VVAAISENLARETCVASLDAGRPTYLHITKQGNGQTYAETLALLRMLNPDEVLLNEGRRNSQLANKIVALFGQAEAEGIQAVVAPNKNGKKGKKQKGRPSRFANQRDDVASLDGSLACETVVKFLPRSYFDQTKGAELLRKLAREGTYDATIVEEFILLSSSFAVLQYTQLCLG------------CGLSRGR-----ATMINLELLVNAKTGRTTNSLVGTIDCTKTSIGGRLLRTNLLAPPTRLDTITARLDLVDSLLDDEEFFYAVMEHLEDLPDVDKMLSYISMTPKKKFGKEGNGALFGQTESQAISAKIASKGISALVCIKSTLSVVPSFAHVLEVQLKDMDQRFNNSAAAKDKRQGDGRIDRDSDESTTVVDSEASRNGATRDSSLKIGLGNESPAKLPVASKQG--RHQLLRAILLAMKQPSLSRVLDAVTDIFTESTSYTKNSHAMRHQECFALKPNTDGMMDVLRKAFLANVDDIYRLADEYAETY-DMNVQVKETSARGYYLSISSADLGVDLALPDVFIQPVKNGKLIHCTTEEVYSLNNRAQENVQDLLLMTHGRIQEVLQVARDNFDCLASLSDAIALLDMCHCFADNVASSRLPWTRPILTDSASDPSQDTEEVTRGGGSLAIRNGRYPIDTSSVGALAEG--EYVPNDTFASSLQNFVVLTGINGSGKSTYLKQVALITVLAHCGSYVPASEASIPIRDQICTRIGSADDQEHNISSFLAEMKETAMICNNTTERSLFLLDELGRATSNEDGVAIAWAVSEFLLTKRAMTFFVTHYPQISKLAEVYPNVQVGRSL 937 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|173837 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11627 ID=mRNA_11627|Name=jgi.p|Trimin1|173837|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2859bp|location=Sequence derived from alignment at Contig_107:527434..534904- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGACACCAGCGCCGCGATCAGCCAGGAGAGGCGGCAGGAATGGTGGCCGback to top protein sequence of jgi.p|Trimin1|173837 >Trimin1|173837|e_gw1.107.93.1 ID=Trimin1|173837|e_gw1.107.93.1|Name=jgi.p|Trimin1|173837|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=953bp MTPAPRSARRGGRNGGRASGGRGTGGSRRTGGTAAADVQTADGSSAGGNSback to top mRNA from alignment at Contig_107:527434..534904- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11627 ID=mRNA_11627|Name=jgi.p|Trimin1|173837|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7471bp|location=Sequence derived from alignment at Contig_107:527434..534904- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_107:527434..534904- >mRNA_11627 ID=mRNA_11627|Name=jgi.p|Trimin1|173837|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2859bp|location=Sequence derived from alignment at Contig_107:527434..534904- (Tribonema minus UTEX_B_3156 )back to top |