mRNA_11626 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352080
Unique NamemRNA_11626
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Match: A0A835ZHA0_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHA0_9STRA)

HSP 1 Score: 622 bits (1605), Expect = 5.070e-225
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 1
Query:    1 MLVPAFFDNCMGSMILGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRWGSGGGL 960
            MLVPAFFDNCMGSMILGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRWGSGGGL
Sbjct:    1 MLVPAFFDNCMGSMILGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRWGSGGGL 320          
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Match: A0A836C7N9_9STRA (CrcB-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N9_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.360e-86
Identity = 148/311 (47.59%), Postives = 195/311 (62.70%), Query Frame = 1
Query:    1 MLVPAFFDNCMGSMILGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVID 933
            +LVP+FFDN  GSMILG LVAA++T+ K GGALVLLTG++ G CGAYTTFSAW LQT+ L++A   +V    PQPQ+  + YI   +A FIV HR+G D+G +LTG V++ AP + +                                               +AI N  LL A    L++ALG++D SW+ +R+WLS LFA+PGA LR+ALAR  N FRGG FPLGTF AN+ GT+  AL+ H ++   +DW DTA RAF  GFCASLTTMSTLVNELA +R D   + G++Y+ S+VILA+ + G++ 
Sbjct:  133 LLVPSFFDNVAGSMILGFLVAASTTMSKGGGALVLLTGMSVGLCGAYTTFSAWTLQTNALLIAPTSDV----PQPQIAALCYIFASIATFIVAHRVGADVGALLTGAVQKAAPGISEGI---------------------------------------------IAIVNGVLLVATAIGLSIALGVNDNSWLEKRYWLSGLFAIPGASLRYALARQFNKFRGGRFPLGTFLANIGGTLACALVTHEFTK-ASDWDDTAARAFVTGFCASLTTMSTLVNELAILRRDHSVQDGVIYLASTVILAQFIVGMVS 393          
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Match: D7G2L8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L8_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.400e-23
Identity = 95/299 (31.77%), Postives = 141/299 (47.16%), Query Frame = 1
Query:   61 AATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNA-FRGGLFPLGTFAANMLGTICSALIAHAYSDYGTD--------WRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVI 930
            A  S+  +E     +  GLT GFCG+YTT+S W L+     +        G P   +  I+ +   LA F      G D+              +KQ+ A+   R  +++     + GG A      AGG++ ++                +L A    LA+ LG+D+ +W RR  WL+ +FA  GAL RF L+R LN+  RGG FPLGTF AN+LG++  AL     S YGT         W + A +AF  GF  SLTTMST ++E+   R         +Y+ ++ I A+ L  ++
Sbjct:  116 ALASSPDRETIPDAMYAGLTVGFCGSYTTYSGWNLRIARAALGQ----VSGAPSGAIVTIVSMATSLAFFAACFSAGCDV--------------MKQI-ASHGRRLNIRR-----MLGGGAL-----AGGDSDAVR-----------NTLGMLGAVYVLLAVLLGVDN-NWSRRIDWLACIFAPFGALSRFFLSRQLNSRLRGGAFPLGTFTANVLGSLVMAL-----SFYGTKNSSSLTSGWSNVAIKAFQTGFLGSLTTMSTFMSEVVGHRDRHTPSASYIYLAATAIAAQALVLIV 368          
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Match: R1B6T8_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1B6T8_EMIHU)

HSP 1 Score: 85.9 bits (211), Expect = 5.040e-15
Identity = 102/297 (34.34%), Postives = 134/297 (45.12%), Query Frame = 1
Query:   25 NCMGSMILGLL---VAATSTIPKEG-------GAL------------VLLTGLTTGFCGAYTTFSAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDD-ASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRDTA--CRAFAVGFCASLTTMSTLVNEL 840
            N +G+ +LGLL    AA   +P E        GA              +L GL TGFCG  TTFS+W      LV A  D V                      I++   G  LG  +  L+   A H+ Q +A  A      +G ++  HG   ++ A  AGG + S AA  R   ALA+  A      V  L+L  G+D  A  + RR++L  LFA  G LLR  LA  LNA R   FPLGTF+ N+L     AL+  A  D   D    A   RA  +GFC SL+T+ST  +E+
Sbjct:  121 NIIGTFLLGLLCPGAAAARLLPAEADDRRRHIGAAGLAGRPAARVNAAILLGLRTGFCGCLTTFSSWNQAMVQLVAAEKDGV----------------------IIMGLKGALLGYAIGLLLPIVALHLGQAAALYAGLRLTPRGRSS--HGADPSQAA--AGGCSASTAAWWRCGAALALLLAVAAELGVG-LSLIPGMDGWADELTRRFFLGLLFAPAGVLLRRGLALKLNA-RCPPFPLGTFSGNVLSCAVMALLYEAIDDDDDDAPHFALVARAVGLGFCGSLSTVSTFADEV 389          
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Match: A0A0C4E6D1_MAGP6 (Uncharacterized protein n=1 Tax=Magnaporthiopsis poae (strain ATCC 64411 / 73-15) TaxID=644358 RepID=A0A0C4E6D1_MAGP6)

HSP 1 Score: 74.3 bits (181), Expect = 3.220e-11
Identity = 94/313 (30.03%), Postives = 137/313 (43.77%), Query Frame = 1
Query:   46 LGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTFSAWALQTDDLVVAN---PDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSAL---IAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGR--WGSGGGL 960
            +G +   T+  P +     L  GLTTGFCG++T+FS++ ++   L + N   P  ++  +      G  ++       +++  + + L G+ +G                AH A+      AA                AR  +   R    LA ++  L+ A VAA   A GL   +W+R +  L+  FA  G L RF L+  LN      FPLGTF AN+ GT   A+   +AHA    G        +    GFC  LTT+ST V ELA + A    R   VY  SS+ +A +LA  I G   W  GG L
Sbjct:  113 IGAMTTTTTPAPGKTKKTPLYVGLTTGFCGSFTSFSSF-IRDAFLALVNGLAPPGLSNSNNNGANGGQSFMA---FLAVILIAVSLSLAGLFSG----------------AHLAQAALKPTAAF---------------ARVRSVLDRTVMVLAWSSW-LVVAVVAATTTAPGLVSDAWLRGQVLLALAFAPLGCLARFYLSTALNGRLSPSFPLGTFVANVAGTAMLAVAWDLAHAR--LGGVVGCLVLQGVEDGFCGCLTTVSTWVAELAEL-ARRRTRDAYVYGASSIAVALLLAIAIMGGLVWSHGGDL 386          
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Match: A0A3N2Q5Y4_9PEZI (CrcB-like protein n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2Q5Y4_9PEZI)

HSP 1 Score: 72.0 bits (175), Expect = 1.850e-10
Identity = 48/123 (39.02%), Postives = 67/123 (54.47%), Query Frame = 1
Query:  601 LFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAY----SDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRWGSGGG 957
            +FA  G LLRF L+ WLN  R   FP+GTF AN+LGT+   L+   Y    +  G        R   VGFC SLTT+S+ + E+AA+       +G+V + ++  L  V+ G +  RWG G G
Sbjct:  263 VFAPVGCLLRFELSAWLN-MRVPSFPVGTFVANILGTV---LLGMGYDLMVAPVGGVLECQVLRGIEVGFCDSLTTLSSWIAEMAALGKRHAVTYGVVSVSTAFSLLTVIMGAM--RWGHGFG 379          
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Match: A0A2C5ZU45_9HYPO (Uncharacterized protein n=1 Tax=Cordyceps sp. RAO-2017 TaxID=2004951 RepID=A0A2C5ZU45_9HYPO)

HSP 1 Score: 68.2 bits (165), Expect = 2.690e-10
Identity = 57/137 (41.61%), Postives = 70/137 (51.09%), Query Frame = 1
Query:  571 WMRRRWW-----LSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSAL---IAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDG--RWGSG 951
            W  R +W     L+ +FA PG LLRF LA  LN  R   FPLGTFAAN+ G    A+   IAH     G        +    GFC  LTT+ST V ELAA+R      H  +Y  +SV+++  L  VI G  RW  G
Sbjct:   19 WPPRDFWRGRATLALVFAPPGCLLRFYLAALLNGRRPA-FPLGTFAANVFGCAVLAMAWDIAHV--PVGGYVGCQVLQGIEDGFCGCLTTISTWVAELAALRR----LHAYLYGAASVLVSFALMVVIMGGLRWTDG 148          
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Match: A0A066XSF4_COLSU (Putative CrcB-like protein n=1 Tax=Colletotrichum sublineola TaxID=1173701 RepID=A0A066XSF4_COLSU)

HSP 1 Score: 70.9 bits (172), Expect = 5.890e-10
Identity = 83/289 (28.72%), Postives = 116/289 (40.14%), Query Frame = 1
Query:  112 GLTTGFCGAYTTFSAWALQTDDLVVAN--PDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDLGGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGGEARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSAL---IAHAYSDYGTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDG--RWGSGGG 957
            GL TGFCG++T+FS++ ++   L   N  PD      P P+  G  ++    A  +V+  + + L  +  G     A   +  S AA    R      A + G  A     W G    ++      WR  A+                               S +FA  G L RF ++RWLN  R   FPLGTF  N+ G     +   + HA    G        +    GFC  LTT+ST V EL A+R     RH  VY+ SSV+    +  V+ G  RW  G G
Sbjct:  236 GLATGFCGSFTSFSSF-IRDVFLAATNDLPDAGGSAPPAPRNGGYSFMA---ALAVVLTTVSLSLSALTVGAHLAAALEPENPSNAAYPLGRKILDRGAVLLGWGA-----WVGAVILAVFPPRDAWRGQAV------------------------------FSLVFAPAGCLARFYVSRWLNP-RVPSFPLGTFVVNVAGVAVLGMCWDLGHA--GIGGVVGCQVLQGVEDGFCGCLTTVSTWVAELTALRR----RHAYVYLASSVVAGFAVLVVVMGPMRWTHGFG 478          
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Match: A0A0C7MMW8_9SACH (LALA0S02e09340g1_1 n=1 Tax=Lachancea lanzarotensis TaxID=1245769 RepID=A0A0C7MMW8_9SACH)

HSP 1 Score: 70.1 bits (170), Expect = 7.000e-10
Identity = 51/130 (39.23%), Postives = 70/130 (53.85%), Query Frame = 1
Query:  580 RRWWLSALFAVPGALLRFALARWLN-AFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTDWRD--------TACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRW 942
            R W LSA+FA PGA+LR+ L++ LN  FR   FP+GTFAAN++GT+  A+I        +D           T   A   GFC SLTT+ST VNE   +      R  ++Y   S+ ++  L  VI G +
Sbjct:  219 RFWTLSAVFAFPGAVLRYVLSKQLNHRFRH--FPMGTFAANVIGTLILAIITLVTKGKRSDGSGIIHSNTAKTVVVALGNGFCGSLTTVSTFVNECQILPF----RRTMIYYFVSIFVSFGLVVVIVGSY 342          
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Match: A0A1G4JM95_9SACH (LAFA_0F04654g1_1 n=1 Tax=Lachancea sp. CBS 6924 TaxID=433476 RepID=A0A1G4JM95_9SACH)

HSP 1 Score: 69.7 bits (169), Expect = 9.440e-10
Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 1
Query:  580 RRWWLSALFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDYGTD--------WRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSVILAEVLAGVIDGRW 942
            R W LSA+FA PGA+LR+ L++ LN  R   FP+GTFAAN+LGT+  A+I        +D          +T   A   GFC  LTT+ST +NE   +      R  ++Y   S+ ++  L  VI G +
Sbjct:  219 RSWTLSAIFAFPGAVLRYFLSKQLN-HRIKHFPMGTFAANVLGTLVLAVITLVTKGKRSDDSAIIHSKTAETVVIALGNGFCGGLTTVSTFINECQILPF----RRTMIYYFVSIFVSFSLVVVILGSY 342          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352080 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZHA0_9STRA5.070e-225100.00CrcB-like protein-domain-containing protein n=1 Ta... [more]
A0A836C7N9_9STRA1.360e-8647.59CrcB-like protein-domain-containing protein n=1 Ta... [more]
D7G2L8_ECTSI1.400e-2331.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
R1B6T8_EMIHU5.040e-1534.34Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A0C4E6D1_MAGP63.220e-1130.03Uncharacterized protein n=1 Tax=Magnaporthiopsis p... [more]
A0A3N2Q5Y4_9PEZI1.850e-1039.02CrcB-like protein n=1 Tax=Sodiomyces alkalinus F11... [more]
A0A2C5ZU45_9HYPO2.690e-1041.61Uncharacterized protein n=1 Tax=Cordyceps sp. RAO-... [more]
A0A066XSF4_COLSU5.890e-1028.72Putative CrcB-like protein n=1 Tax=Colletotrichum ... [more]
A0A0C7MMW8_9SACH7.000e-1039.23LALA0S02e09340g1_1 n=1 Tax=Lachancea lanzarotensis... [more]
A0A1G4JM95_9SACH9.440e-1037.98LAFA_0F04654g1_1 n=1 Tax=Lachancea sp. CBS 6924 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_107contigContig_107:520963..524181 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352080|estExt_Genemark1.C_Ctg_1070072
KEGG TC1.A.43.1,1.A.43.2,1.A.43.3
BRITEko00000,ko02000
KEGG koko:K06199
DescriptionCrcB-like protein, Camphor Resistance (CrcB)
COG categoryD
Max annot lvl33208|Metazoa
EggNOG OGsCOG0239@1|root,2QT5F@2759|Eukaryota,39IFP@33154|Opisthokonta,3C3JJ@33208|Metazoa
Evalue1.38e-14
Seed ortholog7719.XP_002131803.1
Hectar predicted targeting categorysignal peptide
TranscriptId352402
TrackFilteredModels1
ProteinId352080
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352080gene_11626Tribonema minus UTEX_B_3156 geneContig_107 520963..524181 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352080Trimin1|352080|estExt_Genemark1.C_Ctg_1070072Tribonema minus UTEX_B_3156 polypeptideContig_107 520963..524181 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11626_5exon_11626_5Tribonema minus UTEX_B_3156 exonContig_107 520963..520992 -
exon_11626_4exon_11626_4Tribonema minus UTEX_B_3156 exonContig_107 521449..521601 -
exon_11626_3exon_11626_3Tribonema minus UTEX_B_3156 exonContig_107 522132..522425 -
exon_11626_2exon_11626_2Tribonema minus UTEX_B_3156 exonContig_107 523321..523694 -
exon_11626_1exon_11626_1Tribonema minus UTEX_B_3156 exonContig_107 524070..524181 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11626CDS_11626Tribonema minus UTEX_B_3156 CDSContig_107 524070..524181 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11626 ID=mRNA_11626|Name=jgi.p|Trimin1|352080|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=963bp|location=Sequence derived from alignment at Contig_107:520963..524181- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGGTGCCGGCCTTCTTCGACAACTGCATGGGCTCAATGATACTTGG
GCTGTTGGTTGCTGCGACGTCCACCATTCCAAAAGAGGGCGGCGCTCTGG
TGCTCCTGACAGGCTTGACAACAGGCTTCTGCGGCGCCTACACCACATTC
AGCGCGTGGGCGCTGCAGACGGACGATCTCGTCGTTGCTAACCCCGATGA
GGTGGCAGAGGGGGACCCCCAGCCGCAGGTCACGGGCATCATCTACATCT
GCGGGGGTCTGGCGTGCTTCATCGTCGTGCACAGGATGGGCATGGACTTG
GGGGGCGTGCTGACGGGGCTGGTGGAGAGAGGGGCGCCGCATGTGAAGCA
GGTGAGCGCTGCTGCAGCACACAGGGCGCGTGTGAAGCAGGGGAGCGCTG
CAGCAGTGCATGGGGGCACGGCGGCGCGCTGCGCGGGCTGGGCTGGCGGC
GAGGCGCGGTCGCTCGCTGCATGCTCGCGCGTGTGGCGCGCGCTGGCCAT
CACCAACGCGGCCCTGCTCGCGGCGGCCGTGGCAGCGCTCGCACTCGCGC
TGGGGCTCGACGACGCCAGCTGGATGCGGCGGCGCTGGTGGCTCAGCGCG
CTGTTTGCGGTGCCGGGCGCGCTGCTGCGCTTCGCGCTCGCGCGCTGGCT
CAACGCCTTCCGGGGCGGGCTCTTCCCCTTGGGGACGTTCGCGGCCAACA
TGCTGGGGACCATCTGCAGCGCGCTGATTGCGCACGCGTACTCGGACTAC
GGCACCGACTGGCGGGACACCGCGTGCCGGGCGTTCGCCGTCGGCTTCTG
CGCGAGCCTGACGACCATGTCCACCCTTGTCAACGAGCTGGCCGCCATAC
GCGCGGACTTCGGCGCCCGCCACGGCCTTGTGTACATAGGCAGCTCTGTG
ATCCTGGCAGAGGTGCTGGCGGGCGTCATCGATGGGAGGTGGGGGTCAGG
GGGAGGGCTGTAG
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protein sequence of jgi.p|Trimin1|352080

>Trimin1|352080|estExt_Genemark1.C_Ctg_1070072 ID=Trimin1|352080|estExt_Genemark1.C_Ctg_1070072|Name=jgi.p|Trimin1|352080|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=321bp
MLVPAFFDNCMGSMILGLLVAATSTIPKEGGALVLLTGLTTGFCGAYTTF
SAWALQTDDLVVANPDEVAEGDPQPQVTGIIYICGGLACFIVVHRMGMDL
GGVLTGLVERGAPHVKQVSAAAAHRARVKQGSAAAVHGGTAARCAGWAGG
EARSLAACSRVWRALAITNAALLAAAVAALALALGLDDASWMRRRWWLSA
LFAVPGALLRFALARWLNAFRGGLFPLGTFAANMLGTICSALIAHAYSDY
GTDWRDTACRAFAVGFCASLTTMSTLVNELAAIRADFGARHGLVYIGSSV
ILAEVLAGVIDGRWGSGGGL*
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mRNA from alignment at Contig_107:520963..524181-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11626 ID=mRNA_11626|Name=jgi.p|Trimin1|352080|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3219bp|location=Sequence derived from alignment at Contig_107:520963..524181- (Tribonema minus UTEX_B_3156 )
ATGCTGGTGCCGGCCTTCTTCGACAACTGCATGGGCTCAATGATACTTGG GCTGTTGGTTGCTGCGACGTCCACCATTCCAAAAGAGGGCGGCGCTCTGG TGCTCCTGACAGGTGAGAGGCGGGCTGGCGCTGGCTGATTGTACATGTGC CCACAGTTGTGCCCAAGTGTGTTGAATATGCAGCGCGTGACGCGCACAGA CAGCTTGCCATCGTCAATGACCATCAGCAACCTGCCGTGCGGCACCGAAC GTCACCATGATACAAGAAGTGACTGTTGGTTGGGTGTGCAATGGCAGCCG CAAGCTGACCACCCCACGGCCGCTGGCAGCGCCGACCGACCACTGGGCAA AAACACGGAGTCATCAGCACGCGCAGTGTCTCAGCACGGTGTGCCGACTA TGACAACACAAATCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGATGC TGCTGCTGTTTCCGCTGGCGTCCCTCGCGTGAGCCAGGCTTGACAACAGG CTTCTGCGGCGCCTACACCACATTCAGCGCGTGGGCGCTGCAGACGGACG ATCTCGTCGTTGCTAACCCCGATGAGGTGGCAGAGGGGGACCCCCAGCCG CAGGTCACGGGCATCATCTACATCTGCGGGGGTCTGGCGTGCTTCATCGT CGTGCACAGGATGGGCATGGACTTGGGGGGCGTGCTGACGGGGCTGGTGG AGAGAGGGGCGCCGCATGTGAAGCAGGTGAGCGCTGCTGCAGCACACAGG GCGCGTGTGAAGCAGGGGAGCGCTGCAGCAGTGCATGGGGGCACGGCGGC GCGCTGCGCGGGCTGGGCTGGCGGCGAGGCGCGGTCGCTCGCTGCATGCT CGCGCGTGTGGGTCGGTGCCGCTGCGACGCCAAAGTGTGTCGAAGACTTG AAGCCGAGTGAGATGAGGCACGGGCACTGCAGTGTGTGAAGTCGAGTGGT ACACCTCCCTCCCAAACTCCTGCTCGGCTCAGGAAACGCCGGCAGTAGGC AGGGATCGGGATAAGGCGCCACTGCGCTCTTCTGCCGGCTTCTATACATG CTGTTTGCTGCCATGCGCAGGCGCTTTGCGAATCTGCCGCAGTAGTCATT GCTCGCAGTCACTGCTCGCCAACAGTTGTGACGCTCCAATTAAGTGAGGA GGTTGCTCTGGTGCAACGCGCTCTCTGCCTTGGGCATCACATTTGTCCGG CGTCGAAGGACTGATGGTGCGATCAGATCATGCTTGTATCGTGTGTAGGA CGCAGTGCTGGTGCGGACTCTCGGGGAATGTGCTGCAGTGGTCTGCTCAG ACTGCACTGCAATACTCGCCTAGACGGATGTTGGCTGGTCAACACAGACG TACGCCATGTTGTAAGGTCGGCCGTCATGGCAAGTAGTGCTCAAGTTCAG CCGTTGTTTGCGCTGCCTTTCAATATATAGCCACCGCATCTGTCATATTT ACAGCAGTTCATGCCTTGAAGTCCTATGGTCGTTGCCTGTACACAGACTG TACACTTTCCGCTGAGAGCCCGTCGCACGCAGGCTCCCTGAAAAGGGCTT TGCTGGGGTATGTATTGCCCAACGTCAGACGGTTTCTGCGCATTTTCCTG GCAGTGCTGCCATGTCCAGCGCCCATTGCTGTAGGCCAGCACTCAGAGTC CAGCATCCTGCAGCTCCGCCAATGAAACCGCCAACACAACACGCGCTCTC TGCCTCCGGCCTCACTCCTCACCTCGCCGCCGCCAATCTGCCCCCCCCCC CCGCAGCGCGCGCTGGCCATCACCAACGCGGCCCTGCTCGCGGCGGCCGT GGCAGCGCTCGCACTCGCGCTGGGGCTCGACGACGCCAGCTGGATGCGGC GGCGCTGGTGGCTCAGCGCGCTGTTTGCGGTGCCGGGCGCGCTGCTGCGC TTCGCGCTCGCGCGCTGGCTCAACGCCTTCCGGGGCGGGCTCTTCCCCTT GGGGACGTTCGCGGCCAACATGCTGGGGACCATCTGCAGCGCGCTGATTG CGCACGCGTACTCGGACTACGGCACCGACTGGCGGGACACCGCGTGCCGG GTGCGTGGCGCGTTCGTTGCCTGATAGCTTGATGCGTGCCGCGCGCGCGG TGCGCAGTGCAGATGTGTTGCGGCCGCATGCCGATGGTGCAGGATGTGTG CAGGATGCGAACACTTGGTACGGGACAGGCGCGGGGGGTGCTGACGGGCA AGGAGTACTGCGGGAGTGAAGCACGTGCATGTGCCGCAGCATCTGAGAGC CTGTGGCTAGCCTTCAGCGCGGCAGTGCGTCACTTCAACGCAATTTTGAA GTAAGGTCAACATACTTGAAGTTTGCAATTTGAAGTAAGGTCAACGCACT TCAAGTTCATGATGTGTGCTACTTATTAACTACAGAACTTGTCGACGCAT TTGTCATCTCCTGCCGTGTGACAGTGCATGTCAGCCTCTCGTGCGCGCCG TCGCTGCTGCATGTCGCATCAGCAGCAGCCCCCCATCCATCTCCTCGCAA AGCCGCAATTTCCGCGCAACGCCGCGCTTGTCCGCACTCGCCTCACGCCA TGCCCGCATCGCGCCGCGCCGCCGCGACAGGCGTTCGCCGTCGGCTTCTG CGCGAGCCTGACGACCATGTCCACCCTTGTCAACGAGCTGGCCGCCATAC GCGCGGACTTCGGCGCCCGCCACGGCCTTGTGTACATAGGCAGCTCTGTG ATCCTGGCAGAGGTGCTGGCGGGCGTCATCGATGTATGGAAATAGCCCCA TGGAAAGAGCCCCTTAGGGGCCATATTCTGGGATCAAAGCAGAATGGGAG GGGGGGGGGCGGGGGGGACAACTGCGTGTGGACTGCGTTACAACTCTAGA GTAGCGCCCCTTTCACTGGCGCGGAAATGGTTATTGTTGTTACTTTACAG CCTCCACGCTCGCGATGCGCGCGCGCAGTGAGCTGCGCGTCACGTATGGC GGTGCGTGCTGGCCGGCTGGTGCTTTTGCGAGCTGTGTGTCCCACTCTAC GGCTCCAGCTGCCGCTCTGCAAGCGGTTCCCTTGCAGGGCATTTACCGCG CGATATGATTGCGCATCTCTTGCCCTTGTGTTGGGTACAATAGTATGAAG GATACAGTCCGTGTGACGCTGCTCTTCATCTCATCCTCTTGCTGTGCGTT GATGTTGTTAAATGTGTGCGTGTTGGTGCTGGGCGGCAGGGGAGGTGGGG GTCAGGGGGAGGGCTGTAG
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Coding sequence (CDS) from alignment at Contig_107:520963..524181-

>mRNA_11626 ID=mRNA_11626|Name=jgi.p|Trimin1|352080|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=963bp|location=Sequence derived from alignment at Contig_107:520963..524181- (Tribonema minus UTEX_B_3156 )
ATGCTGGTGCCGGCCTTCTTCGACAACTGCATGGGCTCAATGATACTTGG
GCTGTTGGTTGCTGCGACGTCCACCATTCCAAAAGAGGGCGGCGCTCTGG
TGCTCCTGACAGGCTTGACAACAGGCTTCTGCGGCGCCTACACCACATTC
AGCGCGTGGGCGCTGCAGACGGACGATCTCGTCGTTGCTAACCCCGATGA
GGTGGCAGAGGGGGACCCCCAGCCGCAGGTCACGGGCATCATCTACATCT
GCGGGGGTCTGGCGTGCTTCATCGTCGTGCACAGGATGGGCATGGACTTG
GGGGGCGTGCTGACGGGGCTGGTGGAGAGAGGGGCGCCGCATGTGAAGCA
GGTGAGCGCTGCTGCAGCACACAGGGCGCGTGTGAAGCAGGGGAGCGCTG
CAGCAGTGCATGGGGGCACGGCGGCGCGCTGCGCGGGCTGGGCTGGCGGC
GAGGCGCGGTCGCTCGCTGCATGCTCGCGCGTGTGGCGCGCGCTGGCCAT
CACCAACGCGGCCCTGCTCGCGGCGGCCGTGGCAGCGCTCGCACTCGCGC
TGGGGCTCGACGACGCCAGCTGGATGCGGCGGCGCTGGTGGCTCAGCGCG
CTGTTTGCGGTGCCGGGCGCGCTGCTGCGCTTCGCGCTCGCGCGCTGGCT
CAACGCCTTCCGGGGCGGGCTCTTCCCCTTGGGGACGTTCGCGGCCAACA
TGCTGGGGACCATCTGCAGCGCGCTGATTGCGCACGCGTACTCGGACTAC
GGCACCGACTGGCGGGACACCGCGTGCCGGGCGTTCGCCGTCGGCTTCTG
CGCGAGCCTGACGACCATGTCCACCCTTGTCAACGAGCTGGCCGCCATAC
GCGCGGACTTCGGCGCCCGCCACGGCCTTGTGTACATAGGCAGCTCTGTG
ATCCTGGCAGAGGTGCTGGCGGGCGTCATCGATGGGAGGTGGGGGTCAGG
GGGAGGGCTGTAG
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