mRNA_11539 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Match: A0A835YXT3_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT3_9STRA) HSP 1 Score: 661 bits (1705), Expect = 3.940e-240 Identity = 323/324 (99.69%), Postives = 324/324 (100.00%), Query Frame = 1 Query: 1 MNAAATVQQPSYTVRGFGIIKRLGSGATATVYEACTEKNEVVALKVVMRDRNTYMRELRVLKEMRHDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLVLWGSEAAQCMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRGHGGTTACDVWSLAATIFCVVRGHPPFMGQNLVEKIMYGAPDSHRSAPVVCCEEESNLAHLVNWGLSKPARDRPSVDDVLHHPWMANAEDLRARDAACHLFSPSSSEAGSNVSAHSNSIESSTHIGVVPSMSPSIFLAKYTVV 972 MNAAATVQQPSYTVRGFGIIKRLGSGATATVYEACTEKNEVVALKVVMRDRNTYMRELRVLKEMRHDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLVLWGSEAAQCMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRGHGGTTACDVWSLAATIFCVVRGHPPFMGQNLVEKIMYGAPDSHRSAPVVCCEEESNLAHLVNWGLSKPARDRPSVDDVLHHPWMANAEDLRARDA+CHLFSPSSSEAGSNVSAHSNSIESSTHIGVVPSMSPSIFLAKYTVV Sbjct: 1 MNAAATVQQPSYTVRGFGIIKRLGSGATATVYEACTEKNEVVALKVVMRDRNTYMRELRVLKEMRHDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLVLWGSEAAQCMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRGHGGTTACDVWSLAATIFCVVRGHPPFMGQNLVEKIMYGAPDSHRSAPVVCCEEESNLAHLVNWGLSKPARDRPSVDDVLHHPWMANAEDLRARDASCHLFSPSSSEAGSNVSAHSNSIESSTHIGVVPSMSPSIFLAKYTVV 324
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Match: A0A836CE44_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE44_9STRA) HSP 1 Score: 234 bits (596), Expect = 2.040e-71 Identity = 124/274 (45.26%), Postives = 174/274 (63.50%), Query Frame = 1 Query: 46 GFGIIKRLGSGATATVYEACTEKNEVVALKVVMRDRNTYMRELRVLKEMRHDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLVLWGSEAAQCMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRGHGG--TTACDVWSLAATIFCVVRGHPPFM--GQNLVEKIMYGAPDSHRSAPVVC-------CEEESNLAHLVNWGLSKPARDRPSVDDVLHHPWMANAEDLRARDAA 834 G+ +++R+G G T +VY A E VALKVV D Y RE+R L+ ++H IV++ ++ + + GP+LIVMEL WGSL+G+VL +EAA + +VA ALQ+IH +GY HGD+KP N+LR G +K+CDFGCC++ +T RP+GTPAFM PEA++G G T A D W LAAT FC+VRG PPF G+ L + I+YG R+ C ++E++LA+ V WGL+K R RPS++ VL HPW+ A L+ D + Sbjct: 52 GYRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGK--GPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETR-GRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYG-----RANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSDCS 317
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Match: A0A835Z3R1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3R1_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.990e-31 Identity = 86/269 (31.97%), Postives = 135/269 (50.19%), Query Frame = 1 Query: 40 VRGFGIIKRLGSGATATVYEACTEKNEVVALKVVMRDR--NTYMRELRVLKEMRHDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLVLWGSEAAQCMR---DVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRGHGGTTACDVWSLAATIFCVVRGHPPFMGQNLV--EKIMYGAPDSHRSAPVVCC---------EEESNLAHLVNWGLSKPARDRPSVDDVLHHPWM 798 V F I +G+G+TA V+E ++ + VA+K+V + + + RE+ L++++H IV L + + +V EL GSL G+V+ + QC D AL Y+H +GY+H D+KPAN+L G+ K+ DFGC +++ D + GTPAFM+PE + TTA DVWSL T+ VV G PF + LV + +MY +P + C ++ S H G K R +++ + H W+ Sbjct: 7 VNEFSITGHMGTGSTARVFECSSDVHGKVAMKMVYKSKAKESLHREIMALQDLKHKNIVNLLVVINDP---RLDVAFLVEELATKGSLVGVVM--KTSLQCQHVASDTMSALTYMHSRGYVHRDVKPANILIMSDGKAKLTDFGCAIRVS--DCLTRAKFMGTPAFMAPELFSTGIITTAIDVWSLVGTMHHVVYGSLPFGAEGLVLSQSVMYSSPAMGTTMSPRCLKMMNENWTNDDISRFKHFCKEGFRKDPDKRITLEKLAQHDWL 268
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Match: A0A835ZKY0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKY0_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.140e-30 Identity = 75/189 (39.68%), Postives = 94/189 (49.74%), Query Frame = 1 Query: 346 VAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRP---QGTPAFMSPEAYRGHGGTTACDVWSLAATIFCVVRGHPPFM---GQN-LVEKIMYGAP----------------------DSHRSAP--------VVCCEEESNLAHLVNWGLSKPARDRPSVDDVLHHPWMA 801 VA AL +H GY H D+KP NL+R G +K+ DFG ++ + P GTPAFMSPEA G GGT A DVWSL AT+ +V G PF G+ L E+IMYG+P +S AP + E +NL HL+ WGLSK RPS++ L HPW A Sbjct: 1 VASALLAVHASGYAHNDVKPGNLMRTRSGSVKLGDFGSATRLPGSPASCAAPPAAAHGTPAFMSPEACSGRGGTEASDVWSLTATLSALVFGRLPFACDGGEGALAERIMYGSPRYDDGDDDEWGXXXXXXXXXXXESRDGAPDRGGRGGGLRDAHERANLLHLLGWGLSKLPAARPSLEQFLAHPWAA 189
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Match: A0A835ZCT2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT2_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.190e-29 Identity = 75/200 (37.50%), Postives = 114/200 (57.00%), Query Frame = 1 Query: 37 TVRGFGIIKRLGSGATATVYEACTEKNEVVALKVVMRD--RNTYMRELRVLKEMR-HDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLVLWGSEAAQCMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRP-QGTPAFMSPEAYRGHGGTTACDVWSLAATIFCVVRGHPPF 624 +V + + RLG+G TA VYE + + ALKV+ + R + REL L+ ++ H I+ LF +++ K+ +V E+ GSL G+++ G E + ++ L ++H KG+IH D+KPAN+LR G K+ DFGCC ++ DT + GTPAFM+PE ++ T A DVWS A+T+ VV G PF Sbjct: 2 SVNDYVVSGRLGAGVTAQVYECHSPQYGKAALKVIEKSTGRESLHRELMALQALKDHSNIISLFSIIDDQ---KSDITWLVEEMAERGSLVGVMMSGMECQRMGYEIVCGLAHMHSKGFIHRDVKPANILRAANGTSKLADFGCCVRMEEGGDTARNKHFMGTPAFMAPETFKDGVVTPAVDVWSFASTLHYVVYGTLPF 198
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Match: A0A2K1JY57_PHYPA (Protein kinase domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JY57_PHYPA) HSP 1 Score: 125 bits (314), Expect = 4.370e-29 Identity = 95/274 (34.67%), Postives = 134/274 (48.91%), Query Frame = 1 Query: 64 RLGSGATATVYEACTEKNE-VVALKVVMRDRNTYM-------------RELRVLKEMRHDRIVKLFRSEENESYRKTGPFLIVME-------LEPWGSLSGLVLWGSEAAQ-CMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRGHGGT----TACDVWSLAATIFCVVRGHPPFMGQNL---VEKIMYGAPDSHRSAPVVCCEEES-NLAHLVNWGLSKPARDRPSVDDVLHHPW 795 ++G+G+ V ++K+E + A+K+V + R M RE+ +LK + H +VKL+ E +VME E GS G+ G AA+ C RDV L Y+H IHGDIKP N LR G +K+CDFGC + D+D ++R P GTP F +PE G G+ DVW+L T++C+V G PFMG L EKI+ + P++ E + LA L+ L K AR R S+ HPW Sbjct: 131 KIGTGSFGKVVLHQSKKDEKLYAIKIVNKSRLRRMKVSPSETAMMDVLREVAILKRVDHPNVVKLY---EVIXXXXXXXXXMVMEHVEGKSIFEGCGSPGGI---GEAAARKCFRDVVAGLSYLHNHNIIHGDIKPENCLRSVDGSVKICDFGCSRTFEGDNDELWRSP-GTPVFTAPECCSGLTGSYYRGRQADVWALGCTLYCMVMGRYPFMGDTLPSIYEKIV--------NQPLLVPEATNPELADLLRGLLCKDARKRFSLAVAAAHPW 389
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Match: A0A836CFM8_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM8_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.280e-27 Identity = 84/271 (31.00%), Postives = 134/271 (49.45%), Query Frame = 1 Query: 64 RLGSGATATVYEACTEKNEVVALKVVMRDRN--TYMRELRVLKEMR-HDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLVLWGSEAAQCMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATD-DDTVFRRPQGTPAFMSPEAYRGHGGTTACDVWSLAATIFCVVRGHPPFMGQ-------------NLVEKIMYGAP---DSHRSAPVVCCEEE------SNLAHLVNWGLSKPARDRPSVDDVLHHPWM 798 RLG GATA V+E + + ALK++ + + RE+ L+ ++ H I+ L+ ++ + T +V+E+ GSL G+++ G E + D+ L ++H KG++H D+KPAN++R G K+ DFGCC ++A + R GTPAFM+PE ++ T A DVWSLA+T+ VV G PF ++ + IMY P ++ RS + E + H GL K R ++ H W+ Sbjct: 58 RLGRGATAQVFECHSPQFGKAALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDIT---CLVVEMAERGSLVGVMVSGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKDGIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMYCEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWL 325
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Match: UPI0002C2E910 (G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X1 n=2 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C2E910) HSP 1 Score: 119 bits (299), Expect = 2.560e-26 Identity = 83/257 (32.30%), Postives = 129/257 (50.19%), Query Frame = 1 Query: 67 LGSGATATVYEAC-TEKNEVVALKVVMRDRNTYMRELRVLKEMRHDRIVKLF---RSEENESYRKTGPFLIVMELEPWGSLSGLV-LWGSEAAQCMR----DVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRGHGGTTACDVWSLAATIFCVVRGHPPFMGQNLVEKIMYGAPDSHRSAPVVCCEEESNLAHLVNWGLSKPARDRPSVDDVLHHPWMANAE 810 +GSGA VY A TE E++A+K E+R+L+ + H +IV+ R EE+E+ +++E P GS+ L+ +G + ++ + +AL+YIH KG IHGDIK AN+L GRIK+ DFG K+ A R GTP +M+PE RG G + D+WS+ T+ + G+PP+ Q + + +S P + S ++ L K RPS ++L HP++ E Sbjct: 21 IGSGAFGRVYMAMNTESGELIAVKEA--HTKVLQEEVRLLETLSHPKIVRCLGIEREEEDET------LTMLLEYVPGGSIQSLLEKFGPFSLPVIKRFTKQLLLALEYIHIKGIIHGDIKGANILVGSKGRIKLADFGTSKQAAISGSKPMR---GTPYWMAPEVIRGTGHDFSADIWSVGCTVIEMATGNPPWNQQFETIAAFFYCVGTSKSHPPIPEHLSSAAKDFLHECLQKEPTGRPSASELLKHPFLTGKE 266
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Match: A9S9C0_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9C0_PHYPA) HSP 1 Score: 114 bits (284), Expect = 4.450e-26 Identity = 79/216 (36.57%), Postives = 111/216 (51.39%), Query Frame = 1 Query: 64 RLGSGATATVYEACTEKNE-VVALKVVMRDRNTYM-------------RELRVLKEMRHDRIVKLFRSEENESYRKTGPFLIVME-------LEPWGSLSGLVLWGSEAAQ-CMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRG--HGGTTACDVWSLAATIFCVVRGHPPFMGQNL 639 ++G+G+ V ++K+E + A+K+V + R M RE+ +LK + H +VKL+ E +VME E GS G+ G AA+ C RDV L Y+H IHGDIKP N LR G +K+CDFGC + D+D ++R P GTP F +PE G + G A DVW+L T++C+V G PFMG L Sbjct: 27 KIGTGSFGKVVLHQSKKDEKLYAIKIVNKSRLRRMKVSPSETAMMDVLREVAILKRVDHPNVVKLY---EVIXXXXXXXXXMVMEHVEGKSIFEGCGSPGGI---GEAAARKCFRDVVAGLSYLHNHNIIHGDIKPENCLRSVDGSVKICDFGCSRTFEGDNDELWRSP-GTPVFTAPECCSGIYYRGRQA-DVWALGCTLYCMVMGRYPFMGDTL 234
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Match: D8SKL3_SELML (Protein kinase domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SKL3_SELML) HSP 1 Score: 113 bits (282), Expect = 1.110e-25 Identity = 78/225 (34.67%), Postives = 112/225 (49.78%), Query Frame = 1 Query: 166 RELRVLKEMRHDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLV--LWGSEAAQCMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRG------HGGTTACDVWSLAATIFCVVRGHPPFMGQNL---VEKIMYGAPDSHRSAPVVCCEEESNLAHLVNWGLSKPARDRPSVDDVLHHPWMANA 807 RE++V+K +RH IV+L ++ + L +E + SG L S A + RD+ L Y+H IHGDIKP NL+ GRIK+ DFG + DDD + RR GTP F +PE +G HG A DVW+L T++C+V G PF+G+N +KI+ S P + +L +L+ L K R ++D HPW+ A Sbjct: 62 REVKVMKHLRHPNIVRLIEVIDDPECDQLYMVLEYIEGQRMFKQSGPPGGLGESTARRYFRDIVAGLMYLHNNKVIHGDIKPENLMITAEGRIKIGDFGISRTFEGDDD-LLRRSPGTPVFTAPECCKGISRMAYHG--KAADVWALGVTLYCMVTGQYPFVGENFQDTYDKIV----QQELSVPPGL---DPDLQNLLEGLLCKDPDQRMTLDAASCHPWLLKA 276 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|180799 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11539 ID=mRNA_11539|Name=jgi.p|Trimin1|180799|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=975bp|location=Sequence derived from alignment at Contig_228:145457..146431+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAACGCAGCCGCAACAGTCCAACAACCCTCGTATACTGTGCGAGGATTback to top protein sequence of jgi.p|Trimin1|180799 >Trimin1|180799|e_gw1.228.20.1 ID=Trimin1|180799|e_gw1.228.20.1|Name=jgi.p|Trimin1|180799|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=325bp MNAAATVQQPSYTVRGFGIIKRLGSGATATVYEACTEKNEVVALKVVMRDback to top mRNA from alignment at Contig_228:145457..146431+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11539 ID=mRNA_11539|Name=jgi.p|Trimin1|180799|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=975bp|location=Sequence derived from alignment at Contig_228:145457..146431+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_228:145457..146431+ >mRNA_11539 ID=mRNA_11539|Name=jgi.p|Trimin1|180799|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=975bp|location=Sequence derived from alignment at Contig_228:145457..146431+ (Tribonema minus UTEX_B_3156 )back to top |