mRNA_1143 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|346433
Unique Name	mRNA_1143
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|346433 vs. uniprot
Match: A0A835ZJ29_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ29_9STRA)

HSP 1 Score: 624 bits (1610), Expect = 7.740e-220
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 1

Query:    1 MAEAASRRRPRTQANNGNGSAATADNYIVILQPTVKPDEILNTVLKGHKPGFVYGTIFVGFSVDRLVPLLVLEVRLDPRVLTVVEDRASMGLSREVLMETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGDAAAPPCACATALAARALVAFAVIAAIRTGIVTPCAALDELRRERAAPLGAQVSRTSGYTVVNRDAGEMYDMGELDGSAPHVYSIHNTXXXXXXXXXXXXXXXXXXXLPSGIQVPTKARTLLGINQTKTCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPISGKAARMLGIQPMRKAASHASVLEEAASWRESAKRRSTSSGPVPPLQRXXXXXXXXXXXXXXXRPEDDGDDWGYAPSPIRHVSFAAEAQRQPQRXXXXXXXXXXAAPVSTISRKRTPEGQPVVSPTIAAAAEMPPALWRKQSRGQGELSEPEVGAE 1389
            MAEAASRRRPRTQANNGNGSAATADNYIVILQPTVKPDEILNTVLKGHKPGFVYGTIFVGFSVDRLVPLLVLEVRLDPRVLTVVEDRASMGLSREVLMETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGDAAAPPCACATALAARALVAFAVIAAIRTGIVTPCAALDELRRERAAPLGAQVSRTSGYTVVNRDAGEMYDMGELDGSAPHVYSIHNTXXXXXXXXXXXXXXXXXXXLPSGIQVPTKARTLLGINQTKTCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPISGKAARMLGIQPMRKAASHASVLEEAASWRESAKRRSTSSGPVPPLQRXXXXXXXXXXXXXXXRPEDDGDDWGYAPSPIRHVSFAAEAQRQPQRXXXXXXXXXXAAPVSTISRKRTPEGQPVVSPTIAAAAEMPPALWRKQSRGQGELSEPEVGAE
Sbjct:    1 MAEAASRRRPRTQANNGNGSAATADNYIVILQPTVKPDEILNTVLKGHKPGFVYGTIFVGFSVDRLVPLLVLEVRLDPRVLTVVEDRASMGLSREVLMETLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGDAAAPPCACATALAARALVAFAVIAAIRTGIVTPCAALDELRRERAAPLGAQVSRTSGYTVVNRDAGEMYDMGELDGSAPHVYSIHNTXXXXXXXXXXXXXXXXXXXLPSGIQVPTKARTLLGINQTKTCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPISGKAARMLGIQPMRKAASHASVLEEAASWRESAKRRSTSSGPVPPLQRXXXXXXXXXXXXXXXRPEDDGDDWGYAPSPIRHVSFAAEAQRQPQRXXXXXXXXXXAAPVSTISRKRTPEGQPVVSPTIAAAAEMPPALWRKQSRGQGELSEPEVGAE 463

[Close]

BLAST of jgi.p|Trimin1|346433 vs. uniprot
Match: D8LJV4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJV4_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.280e-8
Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 1

Query:  118 ILNTVLKGHKPGFVYGTIFVGFSVDRLVPLLVLEVRLDPRVLTVVEDRASMGLSREVLMETL 303
            +L++VLKG+KP F Y +IF GF+VDR+      E+RLD RVL VVE+R    LS+E+L+ETL
Sbjct:    1 MLSSVLKGYKPTFTYSSIFTGFAVDRVPMQKADEIRLDNRVLKVVENRVVSALSKELLIETL 62

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|346433 vs. uniprot

BLAST of jgi.p|Trimin1|346433 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835ZJ29_9STRA	7.740e-220	100.00	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
D8LJV4_ECTSI	1.280e-8	54.84	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_1	contig	Contig_1:1630409..1641620 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|346433\|estExt_Genemark1.C_Ctg_10234
Hectar predicted targeting category	other localisation
TranscriptId	346755
Track	FilteredModels1
ProteinId	346433

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|346433	gene_1143	Tribonema minus UTEX_B_3156	gene	Contig_1 1630409..1641620 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_1143_17	exon_1143_17	Tribonema minus UTEX_B_3156	exon	Contig_1 1630409..1630668 -
exon_1143_16	exon_1143_16	Tribonema minus UTEX_B_3156	exon	Contig_1 1631060..1631254 -
exon_1143_15	exon_1143_15	Tribonema minus UTEX_B_3156	exon	Contig_1 1633808..1633856 -
exon_1143_14	exon_1143_14	Tribonema minus UTEX_B_3156	exon	Contig_1 1635093..1635134 -
exon_1143_13	exon_1143_13	Tribonema minus UTEX_B_3156	exon	Contig_1 1635289..1635362 -
exon_1143_12	exon_1143_12	Tribonema minus UTEX_B_3156	exon	Contig_1 1636054..1636188 -
exon_1143_11	exon_1143_11	Tribonema minus UTEX_B_3156	exon	Contig_1 1636326..1636376 -
exon_1143_10	exon_1143_10	Tribonema minus UTEX_B_3156	exon	Contig_1 1636932..1637083 -
exon_1143_9	exon_1143_9	Tribonema minus UTEX_B_3156	exon	Contig_1 1637234..1637299 -
exon_1143_8	exon_1143_8	Tribonema minus UTEX_B_3156	exon	Contig_1 1638314..1638338 -
exon_1143_7	exon_1143_7	Tribonema minus UTEX_B_3156	exon	Contig_1 1638800..1638827 -
exon_1143_6	exon_1143_6	Tribonema minus UTEX_B_3156	exon	Contig_1 1639151..1639213 -
exon_1143_5	exon_1143_5	Tribonema minus UTEX_B_3156	exon	Contig_1 1639505..1639571 -
exon_1143_4	exon_1143_4	Tribonema minus UTEX_B_3156	exon	Contig_1 1639953..1640004 -
exon_1143_3	exon_1143_3	Tribonema minus UTEX_B_3156	exon	Contig_1 1640269..1640319 -
exon_1143_2	exon_1143_2	Tribonema minus UTEX_B_3156	exon	Contig_1 1640389..1640500 -
exon_1143_1	exon_1143_1	Tribonema minus UTEX_B_3156	exon	Contig_1 1641427..1641620 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_1143	UTR3_1143	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_1 1630409..1630632 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_1143	CDS_1143	Tribonema minus UTEX_B_3156	CDS	Contig_1 1641427..1641620 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|346433	Trimin1\|346433\|estExt_Genemark1.C_Ctg_10234	Tribonema minus UTEX_B_3156	polypeptide	Contig_1 1630633..1641620 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_1:1630409..1641620-
coding sequence from alignment at Contig_1:1630409..1641620-

spliced messenger RNA

>mRNA_1143 ID=mRNA_1143|Name=jgi.p|Trimin1|346433|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1616bp|location=Sequence derived from alignment at Contig_1:1630409..1641620- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGAAGCAGCGAGCAGGAGGAGGCCTCGTACGCAGGCGAATAATGG
CAATGGCTCTGCTGCCACTGCAGACAACTACATTGTGATACTGCAGCCCA
CAGTGAAGCCCGACGAGATCCTCAACACTGTGCTCAAAGGCCACAAGCCA
GGTTTCGTCTATGGCACCATCTTCGTGGGCTTCTCTGTTGACAGGCTGGT
GCCGCTGCTGGTGCTGGAGGTGCGGCTGGACCCGCGCGTGCTGACGGTTG
TGGAGGACCGTGCGTCCATGGGGCTCAGCAGGGAGGTTTTGATGGAGACG
CTGCAGGACCGCGCGTCCATGGGGCTCAGCATGGAGGTGCTCATGGAGAC
GCTGCAGGACTGCCTGTCCATGGGGCTCAGCAGGGAGGTGCTCATTGGGG
ACGCTGCAGCGCCGCCGTGCGCCTGCGCGACTGCTCTTGCCGCTCGCGCT
CTAGTGGCGTTCGCCGTCATCGCCGCCATTCGCACCGGCATCGTCACGCC
CTGCGCGGCGCTGGACGAGCTCAGGCGCGAGCGCGCCGCGCCGCTCGGCG
CGCAAGTCTCACGGACCAGCGGGTACACCGTCGTCAACAGAGACGCCGGC
GAGATGTACGACATGGGCGAGCTGGATGGCAGCGCTCCGCACGTGTACTC
CATACACAACACCGGCGAGATCTACGACATGGGCGAGCTCGACGGCAGCG
CTCCGTACCGGTACTCCATACTGCCCAGCGGCATCCAGGTGCCGACGAAG
GCGCGCACGCTGCTCGGCATCAACCAGACTAAGACGTGCGTGCCCAACAA
GGCCGCAAAGGTGATGGGGCACTTTGGCGGCGTGACGCACGTGCGCATGG
CGGAGGGCGACGTGATGGGGCACTTTGGCGGCGTGACGCACGTGCGCATG
GCAGAGGGCGACGTGCCGATCAGCGGCAAGGCGGCGCGCATGCTGGGCAT
ACAGCCCATGCGCAAGGCCGCCAGCCACGCGAGTGTGCTGGAGGAGGCGG
CTTCCTGGCGCGAGAGCGCCAAGCGCAGGTCCACGTCCAGCGGTCCCGTG
CCGCCGCTGCAGAGGCGCAGGTTCACGTTCAGCGCTCCCGTGCCGCCGCT
GCAGAGGCGCAGGCCGGAGGACGACGGCGACGACTGGGGCTACGCGCCAT
CACCTATTAGGCACGTCAGCTTTGCAGCAGAGGCTCAGCGGCAGCCGCAG
CGGCAGCAGCAGGCGGCCGCGCCGCCGCCGCCCGCGGCCCCGGTCTCCAC
AATATCGCGCAAGCGCACGCCAGAAGGGCAGCCGGTGGTGTCGCCGACGA
TCGCTGCGGCGGCGGAGATGCCGCCAGCGTTGTGGCGCAAGCAGTCCCGC
GGCCAGGGGGAGCTCTCGGAACCAGAAGTCGGCGCGGAGTGAGGATCCTG
AAGTTCGCAATGTTGAAGTCCGCAAAGTGCCTTGCTGTCAACACAGGGCT
GATGGCAGCGCTGTCATGTGCCCGTAGCGAGGCAACGGCAGCTTGTGACT
CTGACTGGGACTCTGACTCCTGTGGATGCCGCACGCACGGCGGCCGATGC
AGGAGGGCACGCGTTTTGCACGTTTGTGCCTAGGCGGCTGACGTCCTGTC
GATATTTTGGATTCGG

protein sequence of jgi.p|Trimin1|346433

>Trimin1|346433|estExt_Genemark1.C_Ctg_10234 ID=Trimin1|346433|estExt_Genemark1.C_Ctg_10234|Name=jgi.p|Trimin1|346433|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=464bp
MAEAASRRRPRTQANNGNGSAATADNYIVILQPTVKPDEILNTVLKGHKP
GFVYGTIFVGFSVDRLVPLLVLEVRLDPRVLTVVEDRASMGLSREVLMET
LQDRASMGLSMEVLMETLQDCLSMGLSREVLIGDAAAPPCACATALAARA
LVAFAVIAAIRTGIVTPCAALDELRRERAAPLGAQVSRTSGYTVVNRDAG
EMYDMGELDGSAPHVYSIHNTGEIYDMGELDGSAPYRYSILPSGIQVPTK
ARTLLGINQTKTCVPNKAAKVMGHFGGVTHVRMAEGDVMGHFGGVTHVRM
AEGDVPISGKAARMLGIQPMRKAASHASVLEEAASWRESAKRRSTSSGPV
PPLQRRRFTFSAPVPPLQRRRPEDDGDDWGYAPSPIRHVSFAAEAQRQPQ
RQQQAAAPPPPAAPVSTISRKRTPEGQPVVSPTIAAAAEMPPALWRKQSR
GQGELSEPEVGAE*

mRNA from alignment at Contig_1:1630409..1641620-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1143 ID=mRNA_1143|Name=jgi.p|Trimin1|346433|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11212bp|location=Sequence derived from alignment at Contig_1:1630409..1641620- (Tribonema minus UTEX_B_3156 )
ATGGCGGAAGCAGCGAGCAGGAGGAGGCCTCGTACGCAGGCGAATAATGG
CAATGGCTCTGCTGCCACTGCAGACAACTACATTGTGATACTGCAGCCCA
CAGTGAAGCCCGACGAGATCCTCAACACTGTGCTCAAAGGCCACAAGCCA
GGTTTCGTCTATGGCACCATCTTCGTGGGCTTCTCTGTTGACAGGTGGGG
GGTTTAGTTTTTCTGCATGATTGGGCATTTCTGCTTCAACACTTTGCGCC
TGCAGAACTGCCGACCGCTGCTGGCTCTGCCGACGAGCGCGTGGTTGTGT
TGAGTGATTCGATACCTACCCGCTGTGTCGCTCTCTCGCCGCCTGGCAGC
ATCGCGCTGCGGCTCTCAGCATGCAATCAAGCCGACAGTGGATTTGACAG
TTGTCGGCTTGATTCTGCGAGTCACGATCACGTGCGCGGCGAACTCGCGC
GGCTAGAGCTTCTGCTATTGCCCTTCTTTTTCAGGGCGGAATCCAACGGC
TTCGTATCCAGAGAGCACTACGTGATCGACCTAGTCAGCTTCGGCGCCAT
CACAAGCACGCAACACGCACCAACATCACAGCTAGTGCTCTGCATCAGCC
TCAATGGCACTTCAATCTTGTAATTCAGCCCCACAACTGTCGGCAACCTG
TAATGCTGATGATATTGCTGCCCTGATATTAGCGTAGCCTGCTTTTGGCA
CGCCCAATGCCATAACCTGAAGCTCAGGTAGCGGAGTTCCTGATTCCACT
GACTGGATATACAACTTGATGGGGTACGCAGAAGCAGCATGTGCCGGTCC
CTGCATGCTCCTTGCTCGCACCTTCACCGACCGCAGGAGCTGCTACAAGA
TTGCTACGCGATCGCATGCCCTCGTTGGGCGTTCCTTGTGCCGGCAGCTC
GTAATCACACTCCTTGACTCGAACCACTGCGGCAGCGACTTCGGGTGAAC
GCTGCGGCAACACGTTGGTCGGCGCGTGACTCTTCATGCCTCTTACTCAT
TTTCAGCCTTATTTCAAATTTGCGGTCACCCCCCACCTTACGCCGCAAAT
GCTGGACAAGGCCCATCATATCGGGTGAGACGGTGCTAAAGAAGTATGTG
GTGCTTGGTGCGGAGCGCAGGCTGGTGCCGCTGCTGGTGCTGGAGGTGCG
GCTGGACCCGCGCGTGCTGACGGTTGTGGAGGACCGTGCGTCCATGGGGC
TCAGCAGGGAGGTTTTGATGGAGACGCTGCAGGTATGTACGCGCACTCTG
CATACCTATGTACATACCCTATGCACATAGAAGCAAACATACGTGGTGGA
GGACCGCGCGTCCATGGGGCTCAGCATGGAGGTGCTCATGGAGACGCTGC
AGGTATGTACGCGCATTCTTAATACCTGCCCTGAATAAGTACATACATTG
CGTACATGTGCTCTGAAATCATACTTACCCTCAGCGCATTCATGTATCTG
TGGTGGAGGGACTCCATTGGGCGCAGCAGGGAGGTGCTCATGGAGACGCT
GCAGGTATGTACACGCATTCTTACTACCTACCCTAAGCACATACATGCGT
ACACGTACTTTTCAATACATACTTCGAAGTACCTTCCCCAAGCGCATACA
CTCATGCATGGTGGAGGACTGCCTGTCCATGGGGCTCAGCAGGGAGGTGC
TCATTGGGGACGCTGCAGGTATGTGCCTGCACTCTGAATACATACCCTCA
GCGCACATATGTATTTGTGTTGGAGGACCAAGCGTCCATGGGACTTAACT
GTAAGGTGCTCATGGAGACACTTCAGGTCATTCATCAGGTGGTGTGTGCT
CACGGAGACGTTACAGGTACAAATGCGCATGCGCATGATGTAAGCCCAGG
CGGCGCGCAGTGGGGGGGGCTCGATGTGTCAGCGCGCGAGCGGAGAGCAG
GGGCCTACTACGGTAGGATGATGACGCATGCAGCAAGCCGTACCTGGCCG
CACATCAGGCCTTGCGTGTGGTGAACAGGCAAGCGCTGCGCCGGATTGCT
GGCGTGAGTGGGAGCATCAGCGCTCAGGCACACGCCGTTGCGCGCGCAGC
GCCGCCGTGCGCCTGCGCGACTGCTCTTGCCGCTCGCGCTCTAGTGGCGT
TCGCCGTCATCGCCGCGTGATCGCGCGGCCTCTTAGAACTGGGCTTAAGG
TTAGGCGCTGCTTCTCACAGTGGTGACGACGACGCTCAGCGCTTTTGTGC
TTAGCATTAGGGTCAGGGTTAGGGTTAGGGTTCGTCGCCGGCTGCGGTGA
CACCTGAGCCCATGTTCAGGATAGATGGTTGGGGTTTCGCATTACGGCTA
GGTTTGTACCCGGTAGCAGCCAGTGCAATTGTGCCGCCGGCTCCGCGCTT
CGCTCCCGCGTGTCAGCGTTCGCGTCAGTTGCCACCGCTGCGGGCCGTGG
CCGCCAGCATTCGCACCGGCATCGTCACGCCCTGCGCGGCGCTGGACGAG
CTCAGGCGCGAGCGCGCCGCGTGCGCCGTCTGCAGCAGCACTCAGACGAG
CACGACGACGAGCGCTGCCTGGGGGGGGGGGGGGGGGGAGGGGGGGGCTC
ACCCGGAAGCAGGAGAGGCGCAGTCGCAGCGCTAATGCTGCGCTGCCTGC
ACGGTGCGACGTTTTTGAGCACTGTACCAGTGAGTGCTATCTGACTCTGG
AGGTGCCAGCAGCTTCATCGCAGAGTTCACTGCGGCCTGAGCCGGCGGCC
GAGCTGCCGCTGACGCAACCCCTTGCCGAGCGCTGGCGCGCCGCGCCGCA
GCAGCGCGTCTGCCCGCCGCGTTGGTGCGCGCCCGTCAAACAGGCCGCTC
GGCGCGCAAGTCTCACGGACCGTGAGCACTGTGAAGTCTCACGGACCGCG
AGCACTGTGCACACAGGCAGCGTCGCGGCCTTGGGGCGGCTGCTCTTTTG
GCGCACCTGATCGCCACACTTGAAGTTGTGCGCACTTTGAGTGGGGGCGA
CACGCCATCCGAACTTTTCCTTCCGGGTCGCACAGTACTGACGCACGAAC
TGCGCTTTGCGTCCTGTGCATGGGGCCGCTACTCTCGTCTGTGCTGATGA
ATTTTAAGGTTACTACTTCGAAGTATACGAAAGGCGGAACGGAACCGCCA
CGGTTCACAGCACGTGCTCATGCTCGGTGTGCGCAGCGGCTCATGCCAAC
TTGAGGTTCAACCCTGGAGGTGAAATTGAACTTTGAGCTTCGCGCATTAC
TGCCGCAGACTTTTTGAAGCCCGTAAAGTCTGACGTCCCCTGCCCTGCTG
TGTCTTGCCGTTGCTGCTTGCCTGCGGCGCAGAGCGGGTACACCGTCGTC
AACAGAGGTGAGCGGCGGCGTGCGCGTGCCTTTTGGGTAGTTGTGGGTAT
GGGGCAGAATGACTCGCAACGTAACTATTGGGTTAGGTATGGGTATGCTG
CAGAATAACCCGCACACGTACGTACTTCTGCTTGGCCGGCGCGGTGCGTT
CAATAGCAAGGGGGGGGCAATAATTTCGCAGGTCCTTTTTTTACTGTTTG
TGCTTACAAAACTAAATACGTGCTGGGGTGTCAACGTGGTGACATGTCAA
AATTGTGACGAATAGCGTCCGTGCCGCATGTGGTTTGAAGAGAGATACCT
GACAGTCACCATTACTTCTGCAAGACACCCAGAGCCCGCCATTATAGCAC
TTTGCTTTACAGCGTGCGCATGTCAGCATCGCAGGTCTCAACTTCAATGT
TCTTGACAATGCACAACTTCATAAACAACGCTAGCTGCACGCAACCTCTG
ACACGACCCCAGCTTCTTGACTGCAGTGTGCCAGCAGCGCACGCACGCGC
TGGCGGCATCTACAGTTACGGCGTCCGGCCATACAAGTGAAAAGTACAGT
AGCGCTTCCTAGCTTGTCTGGCTGGGATTACCCAATCACTCCTTCACCTG
AAGTTGGACGGCGATCGTTCGACCGCACAAGTGATCAGTGCTCTATAACT
GCAGTGCGGCGCGATGTGACTGGTGTTACCCAAGCACTATGCGCTTCACC
TTGAATCTCTCACAATTACAGGAGGCGCGTGAACACGGGCCTGTGTCCCG
TTGCAATATACACGCGCAGTTGCTGATGTGATTAATGACCCCTGCACGCA
TGTTCTTTGGGCGAGACCTACTGCTGTATGTGCGTATTTACCGAAGTCAA
TACATGTATTCAACACTACGTACTTCTATGTGTTGTAAATGAACTCAATC
AATAGAGCGTCCATAATTTTTGCAACAAATGCATCAACTGTGTATCACTG
CGTATTACGTTGGAAACTGAGTAAACTAAGAAAATTCATCATCGCTGAAT
AAACATTCTGCTTGCGCGCAGACGCCGGCGAGATGTACGACATGGGCGAG
CTGGATGGCAGCGCTCCGCACGTGTACTCCATACACAGTTACTAAACTAA
ATGAGCTGACGACCACCGAACCTGTGCCTTCCCGTGCACACCGGCTAAAT
CTAACTACGACATGGACGACCACCACTTCAATTAAACTCATGAAACGCGA
TGGATCATTATCGCATAAACGTTCTTTCTGCGCGCAGACACCGGCGAGAT
CTACGACATGGGCGAGCTCGACGGCAGCGCTCCGTACCGGTACTCCATAC
TGCCCAGCGGCATCCAGGTGCCGACGAAGGCGCGCACGCTGCTCGGCATC
AACCAGACTAAGACGTGCGTGCCCAACAAGGCCGCAAAGGTACGTGCACG
GTAGCGACGGGAGTTTGGTCAGTTAGGGTTACTGTGAGGGTTAGCATTTG
GGTAAGGGTTAGGGGGGTGGGGTGTAGGGTTAGGTGTGTATGTCGGTGTG
AGTATGGGAGGGGGTGGGGCAAGGGGGAGGGGGCAAGTGCGCGAAGCTGG
GGAAGTCACTGAACAGATAGACACCTATTAATGCCTTTGCTTGTTTTGCT
TTTGAGCACGACTGGTTAGTGACTGGCAATCACACTTACCAGCGTGCAAG
GCCGTCCGTCTGCGTACGCGCCGGTACCGCATGGATTGAGGTTCCGCACC
ATAAGCACTACTGTTGCAAGTGGACCAGGTGCCCCTTTCCGCCCTGTCGT
GAAATGCCTGCGCGCGCAGGTGATGTGGCACTTTGACAGAGGGCAACGTG
CCCCATAAGCAACATATGTAGAAGAATATATAGAAGTATATGTCAATCAC
TTCTCTTCATACACATGTTGTACGTGCCTTGCACTGTGCCCATCAGGCTT
GATCTGAACATGAAAAGAATATGGTTTCCGTGGTTGACCCGCAGGTGATG
GGGCACTTTGGCGGCGTGACGCACGTGCGCATGGCGGAGGGCGACGTGCC
CCATCAGCGGCAATATACTTCAACACCTCTTAATGACATATAAGTCGTAC
TTCAAAGTATGTTATGTGTCTTGCACAACGCCCAGCAAGCCTGATTAACA
TGGAATTTTTTCTTTCCATGTTTGGTCCACAGGTGATGGGGCACTTTGGC
GGCGTGACGCACGTGCGCATGGCAGAGGGCGACGTGCCGATCAGCGGCAA
GGCGGCGCGCATGCTGGGCATACAGCCCATGCGCAAGGCCGCCAGCCACG
CGAGTGTGCTGGAGGAGGTAGGTCTATTACTTCAAAAGTCTTTGAGTGCG
CGCGTGCACATGATTTTGTACACGCGTTTCAGTGTAAGGGGTTTAGGGCT
GTGTACCATGCGGGGCATATAGCCCAGGCGCAACGCTGCCAGCCACGCGA
GCATTGCTGGAGGAGGTATGTGCTCAATACTCAGAACACGTGGGTACTGT
ATGCGTACAGAATTGTTTCAATGTTGGAGTTACGGTGCGGAGTAGGGCTA
ATCTTCCCTGTAGGGCATACAGCCTATGCGCAAGGCCGCCAGCCACGCAA
GTGTGCTGGAGGAGGTACGCCCATTACTACATTACATGCGGGTACAGCCA
GTGTACAAGTTTGTGTACGCGATTCAACGTTAGAGTTGGGGTTAGGGCTA
CTATACCATGCTGGGCATACAGCCCATGCGCAAGGCGGCTTGCCATGCCA
GTTTGCTGGAGGCGGTATGCTCAATACTCAGTACATGTGGGTACAGTATG
CGTGTATGATTGTTTCAATGTTAGAGTTGCGGTTCGGGTGAGGGCTAATC
TTCCGTGTAAGGCATACAGCCCATGCGCAAGGCGGCCTGCCGTGCCCAGT
GTGCTGTAGAAGGGGTGTAGAATACACTACGTGTTTGCAGTTGGCCTCCC
TTGCGAAGTCGTGGGTTGTCACTCTTGATGTTTTGCTTTGCCCCCCACCC
CCCTGCAGGCGGCTTCCTGGCGCGAGAGCGCCAAGCGCAGGTCCACGTCC
AGCGGTCCCGTGCCGCCGCTGCAGAGGCGCAGGTACGTGCCACACTTGAA
GTTGATAAATAGCATCTTGAAGTTGGTGAGAGCGCCACGTATCCAGCGGT
CCTGTGCTGCCGCTGCAGAGGCGCAGGTGTGTGCCAAAATTGAAGTTGAC
AACAGCATCTTGAAGTTGGTGAGAGCGCAAGCGCAGGTTCACGTTCAGCG
CTCCCGTGCCGCCGCTGCAGAGGCGCAGGTGCGCGCCACACTTGAAGTTG
AAGGAAGTAGTATCATGGTGTTTGTCATCCGATAACGATGCATGAGAAGG
CACTACACACACACAAAAAGGAAAGGCACAATTTCGGAGTTTATGCGGCG
GGGAGCCCCCCCTGCCCCTGTACGGCCTCTTCAAGCATGACATCTCACAA
CTGTGCAAGCGGCATCCTTAGCCCGTGTTCTCATGCCGTCTGCAAGCGTG
CTAAAATCCATCCTGCGTGCCTGAGGCCATGCTGTGGGGCTTGGGCATCA
GTGCACCCGCTGCCCTCGGTCTGCAAGTGTGCTGACATTTTGTCAGCGCT
TCGCGTGACTGAGGTCATGCTTTGTGGCTTGGGCATCAGTGCCTGCGCTG
CTGCTCTCGGTTGTGTCGTATCGCTGCCTTGGTCTTGTGGGCAACGGCAA
CGGCTGAGCTCCGCGTCAGCACCAGAGGTAGCACGCACTTTGAAGTATGC
GCAGATATGCGTAGATTGTCAATGGCACGTTTTTCAAAGCATGAGCAGAC
ATGCGTTCATCTTCAACGATGCACTGTCATCGCACACGCTCGCCTTCTCG
AACTGCGGCGCCTCTCGGGCCTCACTGAGAAGGGCAAGGGGGTATTTAAG
CTTAGAGCAAGAAATAGGTAGGTAAAAACTTGGGATCGTCGTCACACCAG
CAGCGCGCGCCTCTGTCAATAGGTAGGGAACATGACATCGGCCGTCACAC
TGGCAGCGTGCGCCTCCGTTCTACTACAATAGGGGACGGCAGAGGCAGAG
TGGCACAACAGGCTCAAGAGTGAACGCTTGGCAAAAACGTACTTGTTGTG
TATGGACCTCACGCATATTCTGGTGTTTGTTTCAGTTTCAGCACTCATCA
GTTGCATGTTGTATTTGATGTACTTGTGAAAACATGTTGAGAATGGCCGT
TACATCACGGTTACACTTTTCTTGATTCTCCCAGTAATACTACTGTTCGT
TGTTCTGGTCTGGCATGGCGCCTACGCTGGCGCCTGCGGGCTGCCTGCGG
CAGGTCCAGTGTCTCCCCTCTGCACTGCGTGTGCGTATCCCAAGGGTATT
GTTATTGCACACTCTCTAAGGGTCTGTTCCCTTTTTAGAGACAGGGGGCA
CCTCCAACTGTACCACAAAAGGTTGCGCACTATCTGGTCAGACTTTCTGT
TCAAACCAGATAGCCAGTTGCCTCACATGCACCCCTACCTCACACTTTTC
TCTGGGCTGTGCAGGCCGGAGGACGACGGCGACGACTGGGGCTACGCGCC
ATCACCTATTAGGGTGAGTCGTCATTCGGAAAGACCTGCGCTACCGTCGC
AGCAGACCTCCGGTACATGGAAGTCCATACACATATTACGATGAATATGC
ATGTACACTGCATTCGATTCTAATCCTTCTATCATGTATTGCGACGACTG
GGGCTACGCGCCATCGCCTATTAGGGTGAGTCGGCATTCGGAAAGACCTG
CGTTACCGTCGCAGCAGACCGCTGGTACATCCAAGTACATGCACTAATCA
CGATGAAGTGTACATGCACACTACACATGATTTCAGCGCTTCCATCATAT
TTTGCAACGACCGGGGCTACGCACCTTCGCCTATTAGGGTGAGTCGTCAT
TTGGAACGGCCTGCGCTACCAGCAGACCTCCGGTATACCGTACACTGCAT
ATGATGTCAATGCTTCCATCATATTATTGCGGCATTGAAGTACATACACT
TATCACGATGAAGTACACATGTACACTGCGTAAAACTTGAATACTTTTAC
CATGTATTGCGACGACTGGGGCGACGCGCCATCGCCTGTCAGGGTGAGTC
GTCATTCGGACACAAGAGACCTGCACGGTCTGCATGTGCCGCGCAAATAT
TGTGGAGATGGAGCGGGTGGAAAACTGCTTTAAAAGTCAATCTACCACAC
ATTCTCAAAGGACAGACACACGTCTGAAGCAGATGTATTTATCCACCTCA
TAGAGGTGAAGGTACCTGGCGAGCGAGTCGGGTTATTTGCAACATTCACC
CTATACCGCACTGACGTTGTGGTTGTAGACTTGGATGAAAGTGAATGGCG
AAGGGGATCGTAGGCGGTGAGACGTTCCTCCCTGACCGCTCTGCATTCTC
AAACAGCATGCAGATTTAAATCTGACAACCAGAGAGTCAGTGTAGTATAG
GGTGAATGTGGCGAATACACCGACTCGCTCATCAGGTGCCTTCACCTTCG
CAAGGCGGATGAACACCTCTGCTTTGGACCTGTGTTTGTCCTTTGAAAAT
GTGTGGTAGATTGACTCAAAGCAGTTCTCTACCCGCTCCGTCTCCACATT
ATTTGCGCGGGCACATGCTGCCGCCACTGGCTTCCAGTCTGCACCTTGTG
ACAACTTCTGCTTTCCAGGCATCTTCACCAGCGGCTTCCAATGCTTCATA
ATGGCTGCCAGCTCTGTATATAACGCATGAAGAGAGCATCAACGCGGAAT
GTTTTCACTTTAATCATGTGCTCCACACTCTGCGACCAGAGACATCCTGG
TAGCAGCAATGGACTACATGGCTGGTGAACGATACAATGCTCTTTCAAAA
ATTCTTTTGAACAAACTTCCTGAACTTCTCAGACGATTCTGTCGCCGCAG
ACCGCCGGTACATTGCGTCACATACACTTATCACAATGAAGTATACATGT
ACATTGCGTATGATTTCAGAGTTATATATGACCACTGCCTGTTGGGGTGA
GTCATCGTTGAGAAATTGCAAGACCCGCACTTCGTTTCAGTATAGTTGCA
GACGTCAACAAGTACATCAAAATTGCTCAGTACAGAGATGACTGCTGGCG
CTGTGCACCTTTGCCTATCAGGGCGAGTTATTGACGTGAACAGCCAGCCA
TCCAAAAGGTTCAAAAGAAGCTTCGATCTTCCTAAAAAACTTCAATTGCA
TCCAAATGTCTAAGCAAGTGCATATACGTACTTCACTGTATACTCTGTTT
GACTCGTGGCCAATGACTGCAGCAGCGGCGACCACAGTTATTGGTGGAAG
GCACTTGCGGCTTACCATCCCTTGTCACCTAGAGCTCTACGATCTTTTAA
TTTGTTTTTCATACACTATTTTTCAAGTATAATTCAGAAACTATTGTTGT
TGACATTTTTTCTGTCTGTCAAGAGTTGCAAAAACTGCTCATGTTTTTTG
GGAGCAGACCTCAAGGCAGTCAAAAGTGTTAGTAGTGCGCCACCTCTCAG
GTTGACTCATTGCTCAGCAAGTCTTCGGTCACTCAATGACTCATTCACTC
AATGACTCATTGCTGAGTCAGTCATTGCTCAGCCACGTCATTAAGTAAAA
CGCCATCGATCACGGCGCCTCAGTTTCCAGCTGGGAGTTATATCATTGGC
CTACAGTAGCGTGGAGCGGCACAATGCGTTCTTTACGCAACTGCACACCT
TACGATGGATTGTCCCGAGCTCAGTGCCTCCGCCAGCCTGAGGCTCTGGA
ACTCGTCAAATATTGCTGCACAATTGGCTTGATGGCGGCAGCTGTGGCTG
CAACAGCCGCACGCAGTGCTGCCGCCTGCCACCGTATGTGCAGCCCTCTA
TGCACGCAGATTGCGCAAGTGATGTGTGTACGGACGTGCACATATGTGCT
GCAGCGCAGGCGCTTTCTCTCTGTGCCCTGAGAACTGTAGTGTTGTGAGC
CGATGCCATCGGCCGGCTTTTCGGCGTTCTGTTTCAGTCGAAGCCGATCA
GCCTAGCCGATCTCGGCTCAGAACACTATAAAACTGCCCGCATGCGCCGT
TCGAGCTGCTGACTTTGACTCTGACTTGCATACAACCTGGGCGCTCCCCC
CTGCGCGCGCGCGCAGCACGTCAGCTTTGCAGCAGAGGCTCAGCGGCAGC
CGCAGCGGCAGCAGCAGGCGGCCGCGCCGCCGCCGCCCGCGGCCCCGGTC
TCCACAATATCGCGCAAGCGCACGCCAGAAGGGCAGCCGGTGGTGTCGCC
GACGATCGCTGCGGCGGCGGAGATGCCGCCAGCGTTGTGGCGCAAGCAGT
CCCGCGGCCAGGTGCGTCAGAGTTGAAATTGATATGCGCGAAGTCCTTGA
CTTGAAGTTCAGGTTGCATGGAGGTATTTTGATCAAGAAGCGACGATCCT
GGAGGCGCAGCCGGTGGTGTCGCCCACCAACGCCGCGGCTACTGACAGCC
CGGCTGTGCTGCGGCATAAGCAGTCTCGTGCCCCCAGGTATGTCAGCTTT
GAAGTACAAGGGGCGCGTTTCAATGCGCTGCGGCGCACAGAGGAACCAAG
GAGGCAGGAGCATGCGCCATACATCATAAATTACATGCAGCGAGTTCAAC
TTTAGTACTGTCGAGGTCTGTCGATCCCTTGAGCTGGTGACACAACAAGA
GTGCTGAGCTCTGCCACGCTGCTGCTGCCTGTCGCACGCACTGCTGCTGC
AGGGGGAGCTCTCGGAACCAGAAGTCGGCGCGGAGTGAGGATCCTGAAGT
TCGCAATGTTGAAGTCCGCAAAGTGCCTTGCTGTCAACACAGGGCTGATG
GCAGCGCTGTCATGTGCCCGTAGCGAGGCAACGGCAGCTTGTGACTCTGA
CTGGGACTCTGACTCCTGTGGATGCCGCACGCACGGCGGCCGATGCAGGA
GGGCACGCGTTTTGCACGTTTGTGCCTAGGCGGCTGACGTCCTGTCGATA
TTTTGGATTCGG

Coding sequence (CDS) from alignment at Contig_1:1630409..1641620-

>mRNA_1143 ID=mRNA_1143|Name=jgi.p|Trimin1|346433|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1392bp|location=Sequence derived from alignment at Contig_1:1630409..1641620- (Tribonema minus UTEX_B_3156 )
ATGGCGGAAGCAGCGAGCAGGAGGAGGCCTCGTACGCAGGCGAATAATGG
CAATGGCTCTGCTGCCACTGCAGACAACTACATTGTGATACTGCAGCCCA
CAGTGAAGCCCGACGAGATCCTCAACACTGTGCTCAAAGGCCACAAGCCA
GGTTTCGTCTATGGCACCATCTTCGTGGGCTTCTCTGTTGACAGGCTGGT
GCCGCTGCTGGTGCTGGAGGTGCGGCTGGACCCGCGCGTGCTGACGGTTG
TGGAGGACCGTGCGTCCATGGGGCTCAGCAGGGAGGTTTTGATGGAGACG
CTGCAGGACCGCGCGTCCATGGGGCTCAGCATGGAGGTGCTCATGGAGAC
GCTGCAGGACTGCCTGTCCATGGGGCTCAGCAGGGAGGTGCTCATTGGGG
ACGCTGCAGCGCCGCCGTGCGCCTGCGCGACTGCTCTTGCCGCTCGCGCT
CTAGTGGCGTTCGCCGTCATCGCCGCCATTCGCACCGGCATCGTCACGCC
CTGCGCGGCGCTGGACGAGCTCAGGCGCGAGCGCGCCGCGCCGCTCGGCG
CGCAAGTCTCACGGACCAGCGGGTACACCGTCGTCAACAGAGACGCCGGC
GAGATGTACGACATGGGCGAGCTGGATGGCAGCGCTCCGCACGTGTACTC
CATACACAACACCGGCGAGATCTACGACATGGGCGAGCTCGACGGCAGCG
CTCCGTACCGGTACTCCATACTGCCCAGCGGCATCCAGGTGCCGACGAAG
GCGCGCACGCTGCTCGGCATCAACCAGACTAAGACGTGCGTGCCCAACAA
GGCCGCAAAGGTGATGGGGCACTTTGGCGGCGTGACGCACGTGCGCATGG
CGGAGGGCGACGTGATGGGGCACTTTGGCGGCGTGACGCACGTGCGCATG
GCAGAGGGCGACGTGCCGATCAGCGGCAAGGCGGCGCGCATGCTGGGCAT
ACAGCCCATGCGCAAGGCCGCCAGCCACGCGAGTGTGCTGGAGGAGGCGG
CTTCCTGGCGCGAGAGCGCCAAGCGCAGGTCCACGTCCAGCGGTCCCGTG
CCGCCGCTGCAGAGGCGCAGGTTCACGTTCAGCGCTCCCGTGCCGCCGCT
GCAGAGGCGCAGGCCGGAGGACGACGGCGACGACTGGGGCTACGCGCCAT
CACCTATTAGGCACGTCAGCTTTGCAGCAGAGGCTCAGCGGCAGCCGCAG
CGGCAGCAGCAGGCGGCCGCGCCGCCGCCGCCCGCGGCCCCGGTCTCCAC
AATATCGCGCAAGCGCACGCCAGAAGGGCAGCCGGTGGTGTCGCCGACGA
TCGCTGCGGCGGCGGAGATGCCGCCAGCGTTGTGGCGCAAGCAGTCCCGC
GGCCAGGGGGAGCTCTCGGAACCAGAAGTCGGCGCGGAGTGA