mRNA_11394 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|133273
Unique Name	mRNA_11394
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|133273 vs. uniprot
Match: A0A835YRZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 6.040e-19
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = -2

Query: 1419 TDSWSIXXXXPVAEPLPINTAPLLPDPDAPELSVNMPLTPLAPPSPVNSDSAPPSLTA 1592
            TDSWSI    PVAEPLPINTAPLLPDPDAPELSVNMPLTPLAPPSPVNSDSAPPSLTA
Sbjct:  291 TDSWSIPPPPPVAEPLPINTAPLLPDPDAPELSVNMPLTPLAPPSPVNSDSAPPSLTA 348

[Close]

BLAST of jgi.p|Trimin1|133273 vs. uniprot
Match: A0A836C8V5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8V5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.160e-12
Identity = 114/126 (90.48%), Postives = 114/126 (90.48%), Query Frame = -2

Query: 3393 ESPVPLTTCTLPPSVLPAPPARSXXXXXXXXXXXXXXXXXXXDMDSPDCXXXXXXXXXXXXXXXXXXXXXEPPMAAPXXXXXXXXXXXXXXXXXXXXXXLAXAAPLAPDTMLTAPLRPLAPVPVAR 3770
            ESPVPLTTCTLPP VLPAPPA  XXXXXXXXXXX X    XXDMDS   XXXXXXXXXXXXXXXXXXXXXEPPMAAP XXXXXXXXXXXXXXXXXXXXXLAXAAPLAPDTMLTAPLRPLAPVPVAR
Sbjct:  189 ESPVPLTTCTLPPPVLPAPPAXXXXXXXXXXXXXAXTAMAXXDMDSXXXXXXXXXXXXXXXXXXXXXXXXEPPMAAPLXXXXXXXXXXXXXXXXXXXXXLAXAAPLAPDTMLTAPLRPLAPVPVAR 314

[Close]

BLAST of jgi.p|Trimin1|133273 vs. uniprot
Match: A0A835YLI4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLI4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.100e-12
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1

Query:    1 MTGGQVSISSGSSRFSSSGQLVLKTPNAGLAGTSGPIMLSTGTSS 135
            MTGGQVSISSGSSRFSSSGQLVLKTPNAGLAGTSGPIMLSTGTSS
Sbjct:    1 MTGGQVSISSGSSRFSSSGQLVLKTPNAGLAGTSGPIMLSTGTSS 45

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|133273 vs. uniprot

BLAST of jgi.p|Trimin1|133273 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835YRZ7_9STRA	6.040e-19	93.10	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C8V5_9STRA	1.160e-12	90.48	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YLI4_9STRA	7.100e-12	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_76	contig	Contig_76:661065..667448 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|133273\|gw1.76.44.1
Hectar predicted targeting category	other localisation
TranscriptId	133595
Track	FilteredModels1
ProteinId	133273

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|133273	gene_11394	Tribonema minus UTEX_B_3156	gene	Contig_76 661065..667448 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|133273	Trimin1\|133273\|gw1.76.44.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_76 661065..667448 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11394_1	exon_11394_1	Tribonema minus UTEX_B_3156	exon	Contig_76 661065..661344 +
exon_11394_2	exon_11394_2	Tribonema minus UTEX_B_3156	exon	Contig_76 661444..662368 +
exon_11394_3	exon_11394_3	Tribonema minus UTEX_B_3156	exon	Contig_76 663341..663521 +
exon_11394_4	exon_11394_4	Tribonema minus UTEX_B_3156	exon	Contig_76 663597..663844 +
exon_11394_5	exon_11394_5	Tribonema minus UTEX_B_3156	exon	Contig_76 664547..664828 +
exon_11394_6	exon_11394_6	Tribonema minus UTEX_B_3156	exon	Contig_76 665255..665949 +
exon_11394_7	exon_11394_7	Tribonema minus UTEX_B_3156	exon	Contig_76 666034..666585 +
exon_11394_8	exon_11394_8	Tribonema minus UTEX_B_3156	exon	Contig_76 666670..666870 +
exon_11394_9	exon_11394_9	Tribonema minus UTEX_B_3156	exon	Contig_76 666937..667448 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11394	CDS_11394	Tribonema minus UTEX_B_3156	CDS	Contig_76 661065..661344 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_76:661065..667448+
coding sequence from alignment at Contig_76:661065..667448+

spliced messenger RNA

>mRNA_11394 ID=mRNA_11394|Name=jgi.p|Trimin1|133273|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3876bp|location=Sequence derived from alignment at Contig_76:661065..667448+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACCGGAGGGCAAGTGAGCATATCTTCAGGTTCAAGCAGATTTTCGTC
CAGCGGGCAGCTTGTTTTAAAAACTCCGAATGCTGGACTTGCTGGCACCA
GTGGCCCCATCATGTTGAGTACAGGCACCTCTAGTTTGGGTAACAGTGGG
CTAATATCTTTGCAAACAGCCTCTGCCCGGTTTGGACGTGGCGGCTCAGT
GCATGTCATCGTAGGAAGTGGCACGAGCGGTGCGGGTGGCGACATCCAGC
TTGCGGCCGGATCCACAAGTGCAGTTGACGGCACTGGTGGTGCTCTGCGG
CTTCTCAGTGGGCAGGGGATGGCAATGTCCAGCGGCGCAGTGATGCTTGC
CTCAGCAGGTGCTGGCACAGCTGGAGTCAGCGGCTCTGTCACATTGATGT
CTGGTACTGCAGCAGCAGGCAGCAGTGGTGCCCTTATGCTCAGCTCCGGG
CAGGCACACAATGGTCATGGAGGGGCCATCTCCCTCGCAGTAGGCGCTGG
TGACAGTGGAGTTGGCGGCGGCATCAGCCTTACAGCGGGAACAAGTGCTG
CTGCCACTGGTGGCCCAATTACCGTAAGCAGCGGTGTGGGGGCAGCATCG
AACAGCGGTTCAGTAAACATGCTCACAGCAGATGCAGGCACTGCAGGCAT
CAGTGGCACGCTGAGCCTTTACACTGGCGCATCAAGTCAGGGCAATTCTG
GCTCACTTCTCATGCGCACAGGGCCTGCAACAGGAGGCAGTGGAGGTGAG
ATCCGCCTTACAGTGGGGTCGTCTACAAGCGGCAAAGGTGGAGATTTGAC
AGCCATGGCTGGTGCAAGTGACTTTTCTGCTGGTGGTTCTATTGTGCTCA
AATCAGGAGCCAGCTCCATGATGAGCAGCGGTGCCATATACGCACAGACG
TCTGATGCTGGAGCCACTGGCGCCAGTGGCGCCCTTTCTTTTGCATCTGG
CACCACCACTTTTGGTGACAGCGGTGCAATCATCTTGTCTACGGGCACTG
CCACTCAAGGGCGGGGCGGGGGCATACAGCTCTCGGTTGGCAGCGGAGAT
ACTGGCAACGGTGGTGGAGTGGATGTGCGGGCTGGCAGTAGTCAGACTGG
CACTGGTGGAGCTATTAACATAACGAGTGGGTCCAGTGTGACCTCTAGCA
GCGGAGATGCATCAATCTTTACCTCTGATGCAGGCGCAGCTGGATCCAGT
GGCCATGGCTCACTTGTGCTGAGTTCAGGAGTTGCCAGGGACGGCGATTC
TGGTGCTGTACTTGTCGGCAGTGGCAGCGCCTCAGGCGGAGTCGGGGGCC
CTGTAAGTCTGACTGTGGGCAGCGGTGACTCTGGTGCTGGTGGTGAATTG
CTTTTGGCATCAGGGGCATCCACAACTGGCGGCGCGGGAGGCGCAGTGGC
TGTCAAGACCGGAAGCGGCGCAGTCAATGATGGCGGCGCACTGTCGCTGT
TGACAGGCGACGGTGGTGCAAGCGGAGTCAGCGGCATGTTGACGCTGAGC
TCGGGTGCATCAGGGTCAGGCAACAGCGGCGCAGTGTTGATCGGCAGCGG
TTCAGCCACTGGTGGAGGTGGAGGTATGCTCCAGCTGTCTGTGGGCAGTG
GCGATGCTGGTCCAGGAGGCGCATTGGTGCTGATTGCAGGGTCTAGCACT
TCCTCCACTGGAGGTGCAGTCAGCATCATCAGCGGAGCAAGCACGTCGTC
TGCTAGTGGGGAAGTGCGTGTGCTGTCTGCAGATGGCGGAGCCTCGGCTG
GTAGCGGCTCGCTCGTCTTCAGCTCAGGCGCATCAGCGACCGGCAACACT
GGCTCTCTGCTGGTAGGTAGCGGGTCGTCCACCGATGGAGTTGGAGGAGA
CCTGAGCCTGACGGTAGGCAGTGGTACCACCGGCACAGGCGGCCAGGTAG
TCCTCAGTGCCGGGCACCTTGCAGCAGGCACTGGTGCTATTGGCGGTGCT
TTCTCTGTCAGCAGCGGCAGCGGCAACTCTGGCAACAGCGGGGCTGTGTC
AGTACAGTCTGGCGATGCTGCTTTGGCAGGCGTCAGCGGAGATGTATCAG
TCAGCTCCGGCACAGCTGCTCTCGGCACCACTGGTGCAGTACGTATCGGC
ACTGGTGTTTCCACTGCGGGCAGCGGAGGCGAGCTGAGCCTGACTGTAGG
GTCCGGCACTGTTGGTGAAGGAGGTGCAGTCGTGATCGAGGCAGGACTGT
CCGCCAGTGGTGGTGCCGTCAGCATAGCAGCAGGCACAGGTACTGCCGGC
GACGGTGGCAGTGTCCGCGTGACAGCTGGCGATGGCAGCTCCACTGGTGG
CGCTTTGTCCTTCGCAAGTGGTGCAGCATCCTCCGGTAACAGCGGAGCAG
TCAGACTTGTTTCAGGGTCCAGCAGTGCATCTGGCGCCAGTGGCAATCTT
GTGTTCAGCTCTGGGACATCATCATCGGGTCCAAGTGGCTCTGTCTTGAT
TGGCAGCGGCACAGCTAGTGAAGGGGCCGGCGGGCAGTTGAGCCTTGTTG
TTGGCTCAGGAACGTCAGGTGCTGGTGGAGGTGTTGTTGTACAAGCAGGC
CAGTCCACAGTCGGTGGTGCTGTCACCATTGCTGCAGGAAGCGGCACGAG
CAGTGCTGGAGGTTCTGTCAGCTTGGCTTCTGGAGACAGTGGCTCAAGCG
GTGTGAGCGGCAATCTTGCTCTGCGGTCCGGTGCTTCTGGTGCAGGTGAC
AGTGGTGCTGTTGAGATCACTACAGGAGGTGCCACAGGCGGCAGAGGCGG
TGCCTTGAGCCTGACCGTCGGCAGCGGCACCAGCGGTGCAGGTGGGGCTC
TGCAGCTGACTGCAGGATTCAGCAGCGGCGGCGACGGTGGCAACGTCGAC
CTCAGCAGTGGTTCATCCAACAGTGCGGCAAGTGGCGACGTCAGTGTTGC
ATCTGCTGCTGGCACAATGTCTGGCAAGCTGGTGCTGAGCTCTGGCGCAT
CGAGGTCTGGCAGCACAGGTGGTGTACTTGTCGGCAGTGGCAACGCCTCA
GGCGGAGTCGGGGGCCCCGTAAGTCTAACTGTGGGCAGCGGTGACTCTGG
TGCTGGTGGTGATTTGCTGATGGCGTCAGGGGCATCCACAACTGGCGGCG
CGGTCAGTATTGCTGCCGGTGCTGGCACAAGCAGTGATGGTGGTGCCATT
AACCTCCTGTCTGGCGACGGCGGTGCAAGCGGAGTCAGCGGCATGTTGAC
GCTGAGCTCGGGTGCATCAGGGTCAGGCAACAGCGGCGCAGTGTTGATCG
GCAGCGGTTCAGCCACTGGTGGAGGTGGAGGTATGCTCCAGCTGTCTGTG
GGCAGTGGCGATGCTGGTCCAGGAGGCGCATTGGTGCTGATGTCAGGACA
AGCAGCCACGGGCGGCAGCGGCTCCAGCAGTGGTGCACTTCACCTGGCGA
CTGGCACCGGAGCGAGTGGCCGCAGCGGTGCTGTTAGCATCGTATCTGGT
GCAAGTGGAGCTGCGGGGGCAAGCGGCGAGCTTGTGCTCAGCACTGGCAC
ATCCCAGTCTGGCACTAGCGGCGCTGTGTCAATCGGCAGCGGCGCAGCCA
TGGGAGGTTCTGGCGGGAAGCTGAGCCTGGTGGTTGGCCCAGGCAGCTCT
GGCACAGGTGGAGATGTGCTGGTGCAGTCAGGGGAATCCATGTCAGGTGG
TGCCATAGCGGTTGTGGCAGGTACAGGTTCAAGCGGCACCGGCGGCGCAG
TGCTCCTTGCTGGTGGTGCTGGTAGCACTGATGGCGGCAATGTGCAGGTG
GTCAGTGGCACAGGGCTCTCTGGGGCAAGCGGCGCAGTTTCTGTTGCTTC
TGCACCCACAGCTGCTGGCATGAGTGGCACAGTGACACTTGGCTCTGGCA
GCAGCAGTGCTGCCAGCACTGGATCT

protein sequence of jgi.p|Trimin1|133273

>Trimin1|133273|gw1.76.44.1 ID=Trimin1|133273|gw1.76.44.1|Name=jgi.p|Trimin1|133273|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1292bp
MTGGQVSISSGSSRFSSSGQLVLKTPNAGLAGTSGPIMLSTGTSSLGNSG
LISLQTASARFGRGGSVHVIVGSGTSGAGGDIQLAAGSTSAVDGTGGALR
LLSGQGMAMSSGAVMLASAGAGTAGVSGSVTLMSGTAAAGSSGALMLSSG
QAHNGHGGAISLAVGAGDSGVGGGISLTAGTSAAATGGPITVSSGVGAAS
NSGSVNMLTADAGTAGISGTLSLYTGASSQGNSGSLLMRTGPATGGSGGE
IRLTVGSSTSGKGGDLTAMAGASDFSAGGSIVLKSGASSMMSSGAIYAQT
SDAGATGASGALSFASGTTTFGDSGAIILSTGTATQGRGGGIQLSVGSGD
TGNGGGVDVRAGSSQTGTGGAINITSGSSVTSSSGDASIFTSDAGAAGSS
GHGSLVLSSGVARDGDSGAVLVGSGSASGGVGGPVSLTVGSGDSGAGGEL
LLASGASTTGGAGGAVAVKTGSGAVNDGGALSLLTGDGGASGVSGMLTLS
SGASGSGNSGAVLIGSGSATGGGGGMLQLSVGSGDAGPGGALVLIAGSST
SSTGGAVSIISGASTSSASGEVRVLSADGGASAGSGSLVFSSGASATGNT
GSLLVGSGSSTDGVGGDLSLTVGSGTTGTGGQVVLSAGHLAAGTGAIGGA
FSVSSGSGNSGNSGAVSVQSGDAALAGVSGDVSVSSGTAALGTTGAVRIG
TGVSTAGSGGELSLTVGSGTVGEGGAVVIEAGLSASGGAVSIAAGTGTAG
DGGSVRVTAGDGSSTGGALSFASGAASSGNSGAVRLVSGSSSASGASGNL
VFSSGTSSSGPSGSVLIGSGTASEGAGGQLSLVVGSGTSGAGGGVVVQAG
QSTVGGAVTIAAGSGTSSAGGSVSLASGDSGSSGVSGNLALRSGASGAGD
SGAVEITTGGATGGRGGALSLTVGSGTSGAGGALQLTAGFSSGGDGGNVD
LSSGSSNSAASGDVSVASAAGTMSGKLVLSSGASRSGSTGGVLVGSGNAS
GGVGGPVSLTVGSGDSGAGGDLLMASGASTTGGAVSIAAGAGTSSDGGAI
NLLSGDGGASGVSGMLTLSSGASGSGNSGAVLIGSGSATGGGGGMLQLSV
GSGDAGPGGALVLMSGQAATGGSGSSSGALHLATGTGASGRSGAVSIVSG
ASGAAGASGELVLSTGTSQSGTSGAVSIGSGAAMGGSGGKLSLVVGPGSS
GTGGDVLVQSGESMSGGAIAVVAGTGSSGTGGAVLLAGGAGSTDGGNVQV
VSGTGLSGASGAVSVASAPTAAGMSGTVTLGSGSSSAASTGS

mRNA from alignment at Contig_76:661065..667448+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11394 ID=mRNA_11394|Name=jgi.p|Trimin1|133273|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6384bp|location=Sequence derived from alignment at Contig_76:661065..667448+ (Tribonema minus UTEX_B_3156 )
ATGACCGGAGGGCAAGTGAGCATATCTTCAGGTTCAAGCAGATTTTCGTC
CAGCGGGCAGCTTGTTTTAAAAACTCCGAATGCTGGACTTGCTGGCACCA
GTGGCCCCATCATGTTGAGTACAGGCACCTCTAGTTTGGGTAACAGTGGG
CTAATATCTTTGCAAACAGCCTCTGCCCGGTTTGGACGTGGCGGCTCAGT
GCATGTCATCGTAGGAAGTGGCACGAGCGGTGCGGGTGGCGACATCCAGC
TTGCGGCCGGATCCACAAGTGCAGTTGACGGTGCTGGCGGCAGTATCAGG
ATTGCTGGTGGAAGTGGGGTTGGCGCTTCTGGCGGCGCTGGTGGCAATGT
AGACATCACTGGCGGTACCAGCATGCAAGGCACTGGTGGTGCTCTGCGGC
TTCTCAGTGGGCAGGGGATGGCAATGTCCAGCGGCGCAGTGATGCTTGCC
TCAGCAGGTGCTGGCACAGCTGGAGTCAGCGGCTCTGTCACATTGATGTC
TGGTACTGCAGCAGCAGGCAGCAGTGGTGCCCTTATGCTCAGCTCCGGGC
AGGCACACAATGGTCATGGAGGGGCCATCTCCCTCGCAGTAGGCGCTGGT
GACAGTGGAGTTGGCGGCGGCATCAGCCTTACAGCGGGAACAAGTGCTGC
TGCCACTGGTGGCCCAATTACCGTAAGCAGCGGTGTGGGGGCAGCATCGA
ACAGCGGTTCAGTAAACATGCTCACAGCAGATGCAGGCACTGCAGGCATC
AGTGGCACGCTGAGCCTTTACACTGGCGCATCAAGTCAGGGCAATTCTGG
CTCACTTCTCATGCGCACAGGGCCTGCAACAGGAGGCAGTGGAGGTGAGA
TCCGCCTTACAGTGGGGTCGTCTACAAGCGGCAAAGGTGGAGATTTGACA
GCCATGGCTGGTGCAAGTGACTTTTCTGCTGGTGGTTCTATTGTGCTCAA
ATCAGGAGCCAGCTCCATGATGAGCAGCGGTGCCATATACGCACAGACGT
CTGATGCTGGAGCCACTGGCGCCAGTGGCGCCCTTTCTTTTGCATCTGGC
ACCACCACTTTTGGTGACAGCGGTGCAATCATCTTGTCTACGGGCACTGC
CACTCAAGGGCGGGGCGGGGGCATACAGCTCTCGGTTGGCAGCGGAGATA
CTGGCAACGGTGGTGGAGTGGATGTGCGGGCTGGCAGTAGTCAGACTGGC
ACTGGTGGAGCTATTAACATAACGAGTGGGTCCAGTGTGACCTCTAGCAG
CGGAGATGCATCAATCTTTACCTCTGATGCAGGCGCAGCTGGATCCAGTG
GCCAGTTGAACCTCAAGACTGGAGCATCGATTGCCGGCGACAGCGGATCT
ATTGTTCTTGCGACCGGCGGCGCCACGGGAGGAAAAGGTGGGCAGCTCCA
GTTGCAGGTAGGCACCGGCGATTGTGGGGTAGGCGGGATGATCACGGTCA
TCGCTGGTGACAGTCGAGATTCTACTGGTGGACAAGTGCTAATCAAAAGT
GGCCAAGGCATAGCTGCATCAAGTGGCAACGTAGCTATCATGACTTCTGA
CGGTGGACCATCTGCTTCGAGCGGCCAACTGTTGCTGAGTTCAGGGGCTT
CACAATCAGGCAGCAGTGGGGCAGTGATGATTGCATCAGGCATTTCCAAC
AATGGCGCTGGTGGTCCAATACACTTGTCCGTGGGGTCCGGAGTCAGCGG
AGTTGGCGGCGCCCTCCGCTTGCAAGCTGGATCATCAATGTCAGGTGGCC
TTATCAGCCTCGTAGCAGGTGCCGCTATCAGCGGATCTGGCGGTGCGCTT
GAGCTGACAACAGGTGCTGGCACATCTAGCGGACCTCTTTCGCTTGTCAC
CGCCAGCAGCTCCGCTCTGGCTACAGGCACTGTCAGCCTGGCATCTGGAG
ACAGCAGCTCAAGTGGCGTAAGCGGAAAAGTTATGCTGAGATCTGGCACC
TCTGGTGCTGGCAACAGTGGAGCAGTTGAAATTGCTACTGGAAGTGCAGA
AGGCGGAAGTGGCGGTATGTTAAGCCTCTCCGTTGGCAGTGGCGTAAGCG
GCACTGGTGGGCATGTGTTTGTCCAATCTGGTGCTTCAACTACTGGCGGA
GCAGTCAACATATTTGCCGGCAGTGGCACAACTGGTGATGGCGGAGATGT
GACTATTTCCAGCGGTGGCGGTGCACGCAGCGGCGTAGTAAAGCTTCTCA
GTGGGGATGGACGTGTGGGAAACACTGGTGATGTGGTCATAGCATCGGGG
ACAGCCAGCCAGTCTTCTGCATCAAGTGGCTCACTTGTGCTGAGTTCAGG
AGTTGCCAGGGACGGCGATTCTGGTGCTGTACTTGTCGGCAGTGGCAGCG
CCTCAGGCGGAGTCGGGGGCCCTGTAAGTCTGACTGTGGGCAGCGGTGAC
TCTGGTGCTGGTGGTGAATTGCTTTTGGCATCAGGGGCATCCACAACTGG
CGGCGCGGTCAGTATCGCTGCCGGTGCTGGCACAAGCAGTGTTGGCGGTG
CCATTAACCTTCTGTCTGGTGCTGGCACCGAGGGAGGCGCAGTGGCTGTC
AAGACCGGAAGCGGCGCAGTCAATGATGGCGGCGCACTGTCGCTGTTGAC
AGGCGACGGTGGTGCAAGCGGAGTCAGCGGCATGTTGACGCTGAGCTCGG
GTGCATCAGGGTCAGGCAACAGCGGCGCAGTGTTGATCGGCAGCGGTTCA
GCCACTGGTGGAGGTGGAGGTATGCTCCAGCTGTCTGTGGGCAGTGGCGA
TGCTGGTCCAGGAGGCGCATTGGTGCTGATGTCAGGACAAGCAGCCACGG
GCGGTGATGTGCGTATGGTAGCAGGGACAGGCATCACGGGATCTGGTGGT
GCGGTGAGCATAGCATCAGGCAGCGGCTCCAGCAGTGGTGCACTTCACCT
GGCGACTGGCACCGGAGCAAGTGGCCGTAGCGGTGCTGTTAGCATCGTAT
CTGGTGCAAGTGGAGCTGCGGGGGCAAGCGGCGAGCTTGTGCTCAGCACT
GGCACATCCCATTCTGGCACTAGCGGCGCTGTGTCAATCGGCAGCGGCGC
AGCCATGGGAGGTTCTGGCGGGAAGCTGAGCCTGGTGGTTGGCCCAGGCA
GCTCTGGCACAGGTGGAGATGTGCTGGTGCAGTCAGGGGAATCCATGTCA
GGTGGTGCCATAGCGGTTGTGGCAGGTGCAGGTTCAAGCGGCACAGGCGG
CGCAGTGCTCCTTGCTGGTGGTGCTGGTAGCACTGATGGCGGCAATGTGC
AGGTGGTCAGTGGCACAGGGCTCTCTGGGGCAAGCGGCGCAGTTTCTGTT
GCTTCTGCACCCACAGCTGCTGGCATGAGTGGCACAGTGACACTTGGCTC
TGGCAGCAGCAGTGCTGCCAGCACTGGATCTGTGCTCATTGGCACTGGGT
CATCCGCTTCCGGCAGTGGTGGCAGTCTGCTGCTGTCTGTCGGCAGTGGC
ACAAGCGGCAATGGCGGCTCGGTAGCAGTCAGTGCAGGGTCTAGCACTTC
CTCCACTGGAGGTGCAGTCAGCATCATCAGCGGAGCAAGCACGTCGTCTG
CTAGTGGGGAAGTGCGTGTGCTGTCTGCAGATGGCGGAGCCTCGGCTGGT
AGCGGCTCGCTCGTCTTCAGCTCAGGCGCATCAGCGACCGGCAACACTGG
CTCTCTGCTGGTAGGTAGCGGGTCGTCCACCGATGGAGTTGGAGGAGACC
TGAGCCTGACGGTAGGCAGTGGTACCACCGGCACAGGCGGCCAGGTAGTC
CTCAGTGCCGGGCAGTCAGAGACTGGTGGTGCATTGACCATGTCTGCAGG
TGCAGGAAGCAGCGCAGGCGGCACTGGTGGTGCTGTATCACTGGTATCAG
GGTCAGGATCTTTGGGTGGAGGGATTGAGGTCACCAGCGGTGCTGGCGCA
TCTGGCAGCAGTGGCGACATCAGCATCGGCACTGGCACAGGCGGGCCAGC
GGGCATGAGTGGTGCTGTCTCTTTCAGCACTGGCAGGTCATCATCTGGCA
CCAGCGGATCCGTGCTGATCGGCAGCGGCAGTGCTGGAAATGGCGGTGGT
GGCCTCTTGAGCCTCACTGTCGGCACAGGTACATCTGGCACTGGAGGAAG
CGTGTTGCTGAGCTCTGGGGCATCTGCATCAGGCGGAGATGTTTCAGTTT
TGGCGGGTTCTGGGTCCTTCGGGTCCGGTGGTTCCATGAGCCTTGCAGCA
GGCACTGGTGCTATTGGCGGTGCTTTCTCTGTCAGCAGCGGCAGCGGCAA
CTCTGGCAACAGCGGGGCTGTGTCAGTACAGTCTGGCGATGCTGCTTTGG
CAGGCGTCAGCGGAGATGTATCAGTCAGCTCCGGCACAGCTGCTCTCGGC
ACCACTGGTGCAGTACGTATCGGCACTGGTGTTTCCACTGCGGGCAGCGG
AGGCGAGCTGAGCCTGACTGTAGGGTCCGGCACTGTTGGTGAAGGAGGTG
CAGTCGTGATCGAGGCAGGACTGTCCGCCAGTGGTGGTGCCGTCAGCATA
GCAGCAGGCACAGGTACTGCCGGCGACGGTGGCAGTGTCCGCGTGACAGC
TGGCGATGGCAGCTCCACTGGTGGCGCTTTGTCCTTCGCAAGTGGTGCAG
CATCCTCCGGTAACAGCGGAGCAGTCAGACTTGTTTCAGGGTCCAGCAGT
GCATCTGGCGCCAGTGGCAATCTTGTGTTCAGCTCTGGGACATCATCATC
GGGTCCAAGTGGCTCTGTCTTGATTGGCAGCGGCACAGCTAGTGAAGGGG
CCGGCGGGCAGTTGAGCCTTGTTGTTGGCTCAGGAACGTCAGGTGCTGGT
GGAGGTGTTGTTGTACAAGCAGGCCAGTCCACAGTCGGTGGTGCTGTCAC
CATTGCTGCAGGAAGCGGCACGAGCAGTGCTGGAGGTGCAGTAAGGCTGG
TGACAGGCTCTGGCATCTCAAGTGGAGCTGTGTCAATCAGCAGTGCTCAC
GGATCAGCAACAACAACAGGTTCTGTCAGCTTGGCTTCTGGAGACAGTGG
CTCAAGCGGTGTGAGCGGCAATCTTGCTCTGCGGTCCGGTGCTTCTGGTG
CAGGTGACAGTGGTGCTGTTGAGATCACTACAGGAGGTGCCACAGGCGGC
AGAGGCGGTGCCTTGAGCCTGACCGTCGGCAGCGGCACCAGCGGTGCAGG
TGGGGCTCTGCAGCTGACTGCAGGATTCAGCAGCGGCGGCGACGGTGGCA
ACGTCGACCTCAGCAGTGGTTCATCCAACAGTGCGGCAAGTGGCGACGTC
AGTGTTGCATCTGCTGCTGGCACAATGTCTGGCAAGCTGGTGCTGAGCTC
TGGCGCATCGAGGTCTGGCAGCACAGGTGGTGTACTTGTCGGCAGTGGCA
ACGCCTCAGGCGGAGTCGGGGGCCCCGTAAGTCTAACTGTGGGCAGCGGT
GACTCTGGTGCTGGTGGTGATTTGCTGATGGCGTCAGGGGCATCCACAAC
TGGCGGCGCGGTCAGTATTGCTGCCGGTGCTGGCACAAGCAGTGATGGTG
GTGCCATTAACCTCCTGTCTGGTACTGGCAGCGGGGGGGGCGCAGTGACT
GTCAAGACCGGAAGCGGCGCAGTCAATGATGGCGGCGCACTGTCGCTGTT
GACAGGCGACGGCGGTGCAAGCGGAGTCAGCGGCATGTTGACGCTGAGCT
CGGGTGCATCAGGGTCAGGCAACAGCGGCGCAGTGTTGATCGGCAGCGGT
TCAGCCACTGGTGGAGGTGGAGGTATGCTCCAGCTGTCTGTGGGCAGTGG
CGATGCTGGTCCAGGAGGCGCATTGGTGCTGATGTCAGGACAAGCAGCCA
CGGGCGGTGATGTGCGTATGATAGCAGGGACAGGCATCACAGGATCTGGT
GGTGCGGTGAGCATAGCATCAGGCAGCGGCTCCAGCAGTGGTGCACTTCA
CCTGGCGACTGGCACCGGAGCGAGTGGCCGCAGCGGTGCTGTTAGCATCG
TATCTGGTGCAAGTGGAGCTGCGGGGGCAAGCGGCGAGCTTGTGCTCAGC
ACTGGCACATCCCAGTCTGGCACTAGCGGCGCTGTGTCAATCGGCAGCGG
CGCAGCCATGGGAGGTTCTGGCGGGAAGCTGAGCCTGGTGGTTGGCCCAG
GCAGCTCTGGCACAGGTGGAGATGTGCTGGTGCAGTCAGGGGAATCCATG
TCAGGTGGTGCCATAGCGGTTGTGGCAGGTACAGGTTCAAGCGGCACCGG
CGGCGCAGTGCTCCTTGCTGGTGGTGCTGGTAGCACTGATGGCGGCAATG
TGCAGGTGGTCAGTGGCACAGGGCTCTCTGGGGCAAGCGGCGCAGTTTCT
GTTGCTTCTGCACCCACAGCTGCTGGCATGAGTGGCACAGTGACACTTGG
CTCTGGCAGCAGCAGTGCTGCCAGCACTGGATCT

Coding sequence (CDS) from alignment at Contig_76:661065..667448+

>mRNA_11394 ID=mRNA_11394|Name=jgi.p|Trimin1|133273|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3876bp|location=Sequence derived from alignment at Contig_76:661065..667448+ (Tribonema minus UTEX_B_3156 )
ATGACCGGAGGGCAAGTGAGCATATCTTCAGGTTCAAGCAGATTTTCGTC
CAGCGGGCAGCTTGTTTTAAAAACTCCGAATGCTGGACTTGCTGGCACCA
GTGGCCCCATCATGTTGAGTACAGGCACCTCTAGTTTGGGTAACAGTGGG
CTAATATCTTTGCAAACAGCCTCTGCCCGGTTTGGACGTGGCGGCTCAGT
GCATGTCATCGTAGGAAGTGGCACGAGCGGTGCGGGTGGCGACATCCAGC
TTGCGGCCGGATCCACAAGTGCAGTTGACGGCACTGGTGGTGCTCTGCGG
CTTCTCAGTGGGCAGGGGATGGCAATGTCCAGCGGCGCAGTGATGCTTGC
CTCAGCAGGTGCTGGCACAGCTGGAGTCAGCGGCTCTGTCACATTGATGT
CTGGTACTGCAGCAGCAGGCAGCAGTGGTGCCCTTATGCTCAGCTCCGGG
CAGGCACACAATGGTCATGGAGGGGCCATCTCCCTCGCAGTAGGCGCTGG
TGACAGTGGAGTTGGCGGCGGCATCAGCCTTACAGCGGGAACAAGTGCTG
CTGCCACTGGTGGCCCAATTACCGTAAGCAGCGGTGTGGGGGCAGCATCG
AACAGCGGTTCAGTAAACATGCTCACAGCAGATGCAGGCACTGCAGGCAT
CAGTGGCACGCTGAGCCTTTACACTGGCGCATCAAGTCAGGGCAATTCTG
GCTCACTTCTCATGCGCACAGGGCCTGCAACAGGAGGCAGTGGAGGTGAG
ATCCGCCTTACAGTGGGGTCGTCTACAAGCGGCAAAGGTGGAGATTTGAC
AGCCATGGCTGGTGCAAGTGACTTTTCTGCTGGTGGTTCTATTGTGCTCA
AATCAGGAGCCAGCTCCATGATGAGCAGCGGTGCCATATACGCACAGACG
TCTGATGCTGGAGCCACTGGCGCCAGTGGCGCCCTTTCTTTTGCATCTGG
CACCACCACTTTTGGTGACAGCGGTGCAATCATCTTGTCTACGGGCACTG
CCACTCAAGGGCGGGGCGGGGGCATACAGCTCTCGGTTGGCAGCGGAGAT
ACTGGCAACGGTGGTGGAGTGGATGTGCGGGCTGGCAGTAGTCAGACTGG
CACTGGTGGAGCTATTAACATAACGAGTGGGTCCAGTGTGACCTCTAGCA
GCGGAGATGCATCAATCTTTACCTCTGATGCAGGCGCAGCTGGATCCAGT
GGCCATGGCTCACTTGTGCTGAGTTCAGGAGTTGCCAGGGACGGCGATTC
TGGTGCTGTACTTGTCGGCAGTGGCAGCGCCTCAGGCGGAGTCGGGGGCC
CTGTAAGTCTGACTGTGGGCAGCGGTGACTCTGGTGCTGGTGGTGAATTG
CTTTTGGCATCAGGGGCATCCACAACTGGCGGCGCGGGAGGCGCAGTGGC
TGTCAAGACCGGAAGCGGCGCAGTCAATGATGGCGGCGCACTGTCGCTGT
TGACAGGCGACGGTGGTGCAAGCGGAGTCAGCGGCATGTTGACGCTGAGC
TCGGGTGCATCAGGGTCAGGCAACAGCGGCGCAGTGTTGATCGGCAGCGG
TTCAGCCACTGGTGGAGGTGGAGGTATGCTCCAGCTGTCTGTGGGCAGTG
GCGATGCTGGTCCAGGAGGCGCATTGGTGCTGATTGCAGGGTCTAGCACT
TCCTCCACTGGAGGTGCAGTCAGCATCATCAGCGGAGCAAGCACGTCGTC
TGCTAGTGGGGAAGTGCGTGTGCTGTCTGCAGATGGCGGAGCCTCGGCTG
GTAGCGGCTCGCTCGTCTTCAGCTCAGGCGCATCAGCGACCGGCAACACT
GGCTCTCTGCTGGTAGGTAGCGGGTCGTCCACCGATGGAGTTGGAGGAGA
CCTGAGCCTGACGGTAGGCAGTGGTACCACCGGCACAGGCGGCCAGGTAG
TCCTCAGTGCCGGGCACCTTGCAGCAGGCACTGGTGCTATTGGCGGTGCT
TTCTCTGTCAGCAGCGGCAGCGGCAACTCTGGCAACAGCGGGGCTGTGTC
AGTACAGTCTGGCGATGCTGCTTTGGCAGGCGTCAGCGGAGATGTATCAG
TCAGCTCCGGCACAGCTGCTCTCGGCACCACTGGTGCAGTACGTATCGGC
ACTGGTGTTTCCACTGCGGGCAGCGGAGGCGAGCTGAGCCTGACTGTAGG
GTCCGGCACTGTTGGTGAAGGAGGTGCAGTCGTGATCGAGGCAGGACTGT
CCGCCAGTGGTGGTGCCGTCAGCATAGCAGCAGGCACAGGTACTGCCGGC
GACGGTGGCAGTGTCCGCGTGACAGCTGGCGATGGCAGCTCCACTGGTGG
CGCTTTGTCCTTCGCAAGTGGTGCAGCATCCTCCGGTAACAGCGGAGCAG
TCAGACTTGTTTCAGGGTCCAGCAGTGCATCTGGCGCCAGTGGCAATCTT
GTGTTCAGCTCTGGGACATCATCATCGGGTCCAAGTGGCTCTGTCTTGAT
TGGCAGCGGCACAGCTAGTGAAGGGGCCGGCGGGCAGTTGAGCCTTGTTG
TTGGCTCAGGAACGTCAGGTGCTGGTGGAGGTGTTGTTGTACAAGCAGGC
CAGTCCACAGTCGGTGGTGCTGTCACCATTGCTGCAGGAAGCGGCACGAG
CAGTGCTGGAGGTTCTGTCAGCTTGGCTTCTGGAGACAGTGGCTCAAGCG
GTGTGAGCGGCAATCTTGCTCTGCGGTCCGGTGCTTCTGGTGCAGGTGAC
AGTGGTGCTGTTGAGATCACTACAGGAGGTGCCACAGGCGGCAGAGGCGG
TGCCTTGAGCCTGACCGTCGGCAGCGGCACCAGCGGTGCAGGTGGGGCTC
TGCAGCTGACTGCAGGATTCAGCAGCGGCGGCGACGGTGGCAACGTCGAC
CTCAGCAGTGGTTCATCCAACAGTGCGGCAAGTGGCGACGTCAGTGTTGC
ATCTGCTGCTGGCACAATGTCTGGCAAGCTGGTGCTGAGCTCTGGCGCAT
CGAGGTCTGGCAGCACAGGTGGTGTACTTGTCGGCAGTGGCAACGCCTCA
GGCGGAGTCGGGGGCCCCGTAAGTCTAACTGTGGGCAGCGGTGACTCTGG
TGCTGGTGGTGATTTGCTGATGGCGTCAGGGGCATCCACAACTGGCGGCG
CGGTCAGTATTGCTGCCGGTGCTGGCACAAGCAGTGATGGTGGTGCCATT
AACCTCCTGTCTGGCGACGGCGGTGCAAGCGGAGTCAGCGGCATGTTGAC
GCTGAGCTCGGGTGCATCAGGGTCAGGCAACAGCGGCGCAGTGTTGATCG
GCAGCGGTTCAGCCACTGGTGGAGGTGGAGGTATGCTCCAGCTGTCTGTG
GGCAGTGGCGATGCTGGTCCAGGAGGCGCATTGGTGCTGATGTCAGGACA
AGCAGCCACGGGCGGCAGCGGCTCCAGCAGTGGTGCACTTCACCTGGCGA
CTGGCACCGGAGCGAGTGGCCGCAGCGGTGCTGTTAGCATCGTATCTGGT
GCAAGTGGAGCTGCGGGGGCAAGCGGCGAGCTTGTGCTCAGCACTGGCAC
ATCCCAGTCTGGCACTAGCGGCGCTGTGTCAATCGGCAGCGGCGCAGCCA
TGGGAGGTTCTGGCGGGAAGCTGAGCCTGGTGGTTGGCCCAGGCAGCTCT
GGCACAGGTGGAGATGTGCTGGTGCAGTCAGGGGAATCCATGTCAGGTGG
TGCCATAGCGGTTGTGGCAGGTACAGGTTCAAGCGGCACCGGCGGCGCAG
TGCTCCTTGCTGGTGGTGCTGGTAGCACTGATGGCGGCAATGTGCAGGTG
GTCAGTGGCACAGGGCTCTCTGGGGCAAGCGGCGCAGTTTCTGTTGCTTC
TGCACCCACAGCTGCTGGCATGAGTGGCACAGTGACACTTGGCTCTGGCA
GCAGCAGTGCTGCCAGCACTGGATCT