mRNA_11360 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|170890
Unique NamemRNA_11360
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A835YK58_9STRA (Phosphatidic acid phosphatase type 2/haloperoxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK58_9STRA)

HSP 1 Score: 617 bits (1592), Expect = 1.640e-223
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 1
Query:    1 MRLQRWKEYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPNSPEAAV 918
            MRLQRWKEYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPNSPEAAV
Sbjct:    1 MRLQRWKEYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPNSPEAAV 306          
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: D7G5S0_ECTSI (Phosphatidic acid phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S0_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 5.780e-46
Identity = 98/269 (36.43%), Postives = 140/269 (52.04%), Query Frame = 1
Query:    4 RLQRWK--EYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAG--ALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVL 798
            R++RW+  E+  V+V   ++  +    + Y Q++P + +   + FPV LG  WCTA  L+ C+I S             CC  + AG+ PHE V  + L  +  V+P+  +  R   +K G Y       D +LG V  +     +T  IK  VGRPRPN+ AL  ++      G     L      SFPSGH+S SMA + Y  LV WGD    A     W+R+L   L +    +S++VGV+RI+D+WHFQDDV AGW +GA SA L
Sbjct:   18 RIRRWRVPEFVGVVVGLAVVSLVQACFSEYEQFVPENNKEGINGFPVGLGAEWCTASDLSSCAIQS----------ESGCCKGMQAGKSPHETVDEFQLWFVYFVIPAAFVAVRQVLAKLGLYRGAASLADVILGLVFCLGLSVTLTDAIKFMVGRPRPNYAALRALVEHG---GSNVMSLKAKSIRSFPSGHSSMSMAGMFYVTLVCWGDLSRFAAENKSWRRSLLAYLSICPILISIYVGVSRIRDFWHFQDDVVAGWALGAASAAL 273          
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A835ZFV7_9STRA (Phosphatidic acid phosphatase type 2/haloperoxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV7_9STRA)

HSP 1 Score: 154 bits (388), Expect = 7.240e-43
Identity = 77/129 (59.69%), Postives = 93/129 (72.09%), Query Frame = 1
Query:  424 VGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGT-GRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHA 807
            V + TLFIKK VGRPRPN+ AL EV+AQSPAL  G+ G LGG+PR SFPS H+S +MAA  + ALV WGDA    GP W R LA  + L+    ++WVG+TRIQDYWH  DDV AGW +GAL A +G+A
Sbjct:    4 VSIATLFIKKGVGRPRPNYAALVEVVAQSPALAAGSAGALGGHPRTSFPSAHSSHAMAAFGFFALVVWGDAARRVGPLWARNLAGMVALLSMACAIWVGMTRIQDYWHHPDDVFAGWALGALCAKIGYA 132          
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A7S4DJ78_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJ78_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 6.820e-17
Identity = 79/255 (30.98%), Postives = 122/255 (47.84%), Query Frame = 1
Query:   97 LPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASK-AGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQ----RTLAVTLI--LVLPF---LSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPL 831
            +P    N  HSFP+++  +WCTA     C       + IL ++ G C AQ     +P  Q+  W    L+  +P + ++ R F  +   + P R+   D+L+   ++   V + T F+K  VG PRPN+ AL    A      GG+    G    SFPS HAS SM  + + AL+   D   LR P  +    R  A +L+  L   F    +++V  +R++D++HF  DVA G  +G  +A+ G       PPL
Sbjct:   36 VPVSLTNSDHSFPLRVDGIWCTAADFEAC-------EGILTSS-GCCSAQHYEEIIPGTQLQ-W----LLRYIPLIFILGRFFLLRLTKKMPVRI-FFDSLVALFSTWLAVEITTGFLKNFVGYPRPNYYAL---RAYKRLNDGGSD---GAANQSFPSSHASYSMGGMAFVALLLLQDWQHLRAPAQKGGPPRLPAGSLLPHLAASFPLAYAVFVAASRVRDHFHFPADVATGMALGLGAALFGLRCGGDSPPL 270          
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A8J9RHY0_9CHLO (Phospholipid phosphatase 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RHY0_9CHLO)

HSP 1 Score: 85.5 bits (210), Expect = 2.380e-15
Identity = 63/191 (32.98%), Postives = 92/191 (48.17%), Query Frame = 1
Query:  262 LPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFL-------------ALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALR-----GPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVG 780
            L  + V +W++  + L  P+ +++A  +     R+  RL   +A+L  +  V    ++T  IK  VGRPRPNF+               GE +    A+    GR       SFPSGH S S + L Y  L  W   G LR     G  W+    V   LV    ++W+G+TR+QDYWH  +DV AG+L+G
Sbjct:  100 LHKDSVPSWSVPVIALCGPAAVIIAHSYI----RHTPRLEVHNAVLNALMCVITTALITNLIKLGVGRPRPNFMMQCWPGGDVQWDATSGEALCSKNAINPAEGRK------SFPSGHTSWSTSGLGY--LTFWLG-GKLRIYDGTGHSWR----VPASLVPLGGAVWIGITRLQDYWHHWEDVTAGFLLG 273          
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A446XK62_TRITD (acidPPc domain-containing protein n=2 Tax=Triticum TaxID=4564 RepID=A0A446XK62_TRITD)

HSP 1 Score: 79.3 bits (194), Expect = 1.750e-13
Identity = 67/209 (32.06%), Postives = 98/209 (46.89%), Query Frame = 1
Query:  262 LPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGD---ALLGFVASVSWVGVVTLFIKKAVGRPRPNFL-------------ALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSL-WVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQH 837
            +    V  W +  + +V+P V +V        G Y  R    D   A+LG + SV    +VT+ IK AVGRPRP+F                G+VI       G  G +    + SFPSGHAS + A L +   ++W  AG ++    +  +A   I++LP LS   V V+R+ DYWH   DV AG ++G + A   +     PP  +H
Sbjct:   67 MKRSTVPDWAVPVIAVVVPMVFIV--------GIYIKRRNVYDLHHAILGLLFSVLITAIVTVAIKDAVGRPRPDFFWRCFPDGVPKYDNVTGDVICH-----GKPGAIKEGYK-SFPSGHASGAFAGLGF---LSWYLAGKMKAFDRRGHIAKLCIVLLPLLSATMVAVSRVTDYWHHWQDVFAGGVLGWVVASFCYLQFFPPPYSEH 258          
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: E1Z8S6_CHLVA (acidPPc domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z8S6_CHLVA)

HSP 1 Score: 78.6 bits (192), Expect = 2.320e-13
Identity = 59/182 (32.42%), Postives = 85/182 (46.70%), Query Frame = 1
Query:  274 QVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALG-GGTGRLGGNP------RYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVL 798
            QV  W +  + L  P + ++    A +  R  A      A L  V+ V+  G++T +IK  VGRPRP+F+         P     G  +   N         SFPSGH S S + L Y  L   G      G      L V  + +L   ++W+G++R+QDYWH  +DVAAG+ +G L A L
Sbjct:   14 QVPAWAVPCVALFSPLLCIMGFRLAGRISRVEAH----HASLMAVSCVATTGLLTNWIKINVGRPRPHFVHRCWPNGTKPVYTPDGLPKCADNAINVAEGLKSFPSGHTSWSTSGLGYLTLWLLGKLNCFDGQAQPTRLVVAFVPLLG--AVWIGMSRVQDYWHHVEDVAAGFCLGLLLAYL 189          
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: I0YT05_COCSC (PAP2-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YT05_COCSC)

HSP 1 Score: 79.3 bits (194), Expect = 3.470e-13
Identity = 63/192 (32.81%), Postives = 92/192 (47.92%), Query Frame = 1
Query:  262 LPHEQVSTWTLAALVLVMPSVLLVAR-HFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLAL-------------GEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALR-----GPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVG 780
            L  + V +W++  + L  P+ + +A  H A        RL   +A+L  +  V    ++T  +K  VGRPRPNF+               GE +  + A+    GR       SFPSGH S S + L Y  L  W  AG LR     G  W+   +    LV    ++W+G+TR+QDYWH  +DV AG+L+G
Sbjct:  100 LHKDSVPSWSVPVISLCGPAAVFIAYFHIADT-----PRLEVHNAVLNGLMCVITTALITNLVKLGVGRPRPNFMMQCWPDGLVKWNEDSGEALCSTNAIDPAEGRK------SFPSGHTSWSTSGLGY--LTFW-LAGKLRIYDGSGHSWRLPAS----LVPLGGAVWIGITRLQDYWHHWEDVTAGFLLG 273          
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A8K0H272_9ROSA (Uncharacterized protein n=2 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0H272_9ROSA)

HSP 1 Score: 79.0 bits (193), Expect = 5.320e-13
Identity = 71/228 (31.14%), Postives = 100/228 (43.86%), Query Frame = 1
Query:  262 LPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFL------------ALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGAL-RGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPNSP 906
            L    V  W +    +++P V+ +  +F  +   Y        A+LG + S     V+T+ IK AVGRPRP+F               G+VI        G   +      SFPSGH S S A L + +L   G      RG    +   V L L++  L   VG++R+ DYWH   DV AG L+G   A   + L   PPP  HD+G G  A +  L +  +   SP
Sbjct:   84 LKDNTVPGWAVPMYAVLLPIVIFLVVYFRRR-DVYDLH----HAILGLLFSFLVTAVITVSIKNAVGRPRPDFFWQCFPDGKDVYDKWGDVICH------GDKSVIREGHKSFPSGHTSGSFAGLGFLSLYLSGKIKVFDRGGHIAKLCIVFLPLLVASL---VGISRVDDYWHHWQDVFAGGLIGLTVATFCY-LQFFPPPY-HDEGWGPYAYFRVLEESRRNTQSP 295          
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A6P5Y9V6_DURZI (lipid phosphate phosphatase 2-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5Y9V6_DURZI)

HSP 1 Score: 77.8 bits (190), Expect = 9.000e-13
Identity = 70/226 (30.97%), Postives = 101/226 (44.69%), Query Frame = 1
Query:  271 EQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFL-------------ALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFL-SLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPNSP 906
            + +  W +  L +++P V+    ++  K   Y        A+LG + SV   GV+T  IK  VGRPRPNF                G+VI    A     G        SFPSGH S S A L +   ++W  +G +R    +  +A   IL  P L + +VGV+R+ DYWH   DV  G L+G+  A   + L   P P + +DG    A +  L+       SP
Sbjct:   64 DTIPFWAVPFLAVLLPLVVFSINYYFRK-DVYDFH----HAILGLLFSVLLTGVITDSIKDVVGRPRPNFFWRCFPDGKAVFDKITGDVICHGNAKDIKEGYK------SFPSGHTSWSFAGLSF---LSWYLSGKIRAFDRRGHVAKLCILFFPVLVAAFVGVSRVDDYWHHWTDVFTGALIGSTMAAFCY-LQFFPYP-RDEDGWAPHAYFQMLTDRNNGAKSP 273          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YK58_9STRA1.640e-223100.00Phosphatidic acid phosphatase type 2/haloperoxidas... [more]
D7G5S0_ECTSI5.780e-4636.43Phosphatidic acid phosphatase n=2 Tax=Ectocarpus T... [more]
A0A835ZFV7_9STRA7.240e-4359.69Phosphatidic acid phosphatase type 2/haloperoxidas... [more]
A0A7S4DJ78_HETAK6.820e-1730.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J9RHY0_9CHLO2.380e-1532.98Phospholipid phosphatase 4 n=1 Tax=Coccomyxa sp. O... [more]
A0A446XK62_TRITD1.750e-1332.06acidPPc domain-containing protein n=2 Tax=Triticum... [more]
E1Z8S6_CHLVA2.320e-1332.42acidPPc domain-containing protein (Fragment) n=1 T... [more]
I0YT05_COCSC3.470e-1332.81PAP2-domain-containing protein n=1 Tax=Coccomyxa s... [more]
A0A8K0H272_9ROSA5.320e-1331.14Uncharacterized protein n=2 Tax=Rhamnella rubriner... [more]
A0A6P5Y9V6_DURZI9.000e-1330.97lipid phosphate phosphatase 2-like n=1 Tax=Durio z... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_76contigContig_76:357735..361354 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|170890|e_gw1.76.101.1
BRITEko00000,ko00001,ko01000
KEGG rclassRC00017
KEGG ReactionR02239
KEGG Pathwayko00561,ko00564,ko01110,map00561,map00564,map01110
KEGG koko:K18693
EC3.1.3.4,3.1.3.81
Descriptionphosphatidate phosphatase activity
COG categoryI
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0671@1|root,KOG3030@2759|Eukaryota
Evalue9.48e-47
Seed ortholog2880.D7G5S0
Hectar predicted targeting categoryother localisation
TranscriptId171212
TrackFilteredModels1
ProteinId170890
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170890gene_11360Tribonema minus UTEX_B_3156 geneContig_76 357735..361354 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170890Trimin1|170890|e_gw1.76.101.1Tribonema minus UTEX_B_3156 polypeptideContig_76 357735..361354 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11360_4exon_11360_4Tribonema minus UTEX_B_3156 exonContig_76 357735..357916 -
exon_11360_3exon_11360_3Tribonema minus UTEX_B_3156 exonContig_76 358838..358904 -
exon_11360_2exon_11360_2Tribonema minus UTEX_B_3156 exonContig_76 359980..360296 -
exon_11360_1exon_11360_1Tribonema minus UTEX_B_3156 exonContig_76 361000..361354 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11360CDS_11360Tribonema minus UTEX_B_3156 CDSContig_76 361000..361354 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11360 ID=mRNA_11360|Name=jgi.p|Trimin1|170890|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=921bp|location=Sequence derived from alignment at Contig_76:357735..361354- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGCTGCAGAGGTGGAAAGAGTACGCCATCGTCATCGTCACAACACA
GATTCTCTACGCCATCGGCAAGAGCATGACCTTCTATGCGCAGTACCTGC
CAGCGGATGCCGAAAACCAGCAGCATTCCTTCCCTGTGAAGCTGGGGGAT
GTCTGGTGCACCGCTAAGCAGCTGGCGCCGTGCTCCATAGGCTCTCCAGC
AATACAGGCCATCCTGGCCGCTGCGCACGGGGACTGCTGCGCGCAGCTGT
TGGCGGGTGAGCTGCCTCATGAGCAGGTTTCGACGTGGACTCTGGCGGCG
CTGGTTCTGGTGATGCCGTCGGTGCTGCTGGTCGCACGACACTTTGCCAG
CAAAGCCGGCCGCTACCCCGCGCGCCTCCCCTCCGGCGACGCCCTCCTGG
GCTTCGTGGCAAGCGTCAGCTGGGTGGGCGTCGTCACCCTCTTCATCAAG
AAAGCAGTTGGGCGGCCACGCCCCAACTTCCTGGCCCTTGGGGAGGTCAT
CGCGCAGAGCCCAGCGCTGGGGGGGGGGACGGGCAGGCTGGGGGGGAACC
CGCGCTACAGCTTCCCGAGCGGGCACGCGAGCACCAGCATGGCGGCGCTG
CTGTACGGGGCGCTGGTGGCGTGGGGGGACGCGGGGGCGCTGCGCGGGCC
GCGGTGGCAGCGCACGCTTGCGGTCACATTAATACTAGTGCTGCCGTTCC
TGTCACTGTGGGTGGGCGTCACACGGATACAGGACTATTGGCACTTCCAA
GACGACGTGGCTGCGGGCTGGCTGGTGGGCGCGCTGTCTGCGGTGCTGGG
CCATGCGCTCGCCGCGCAGCCGCCGCCGCTGCAGCACGACGACGGCGACG
GCGGCAGCGCGCGCTACCACTACCTGAGCCAGCACCTGCAGCTGCCCAAC
TCGCCAGAGGCGGCTGTGTGA
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protein sequence of jgi.p|Trimin1|170890

>Trimin1|170890|e_gw1.76.101.1 ID=Trimin1|170890|e_gw1.76.101.1|Name=jgi.p|Trimin1|170890|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=307bp
MRLQRWKEYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGD
VWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAA
LVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIK
KAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAAL
LYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQ
DDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPN
SPEAAV*
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mRNA from alignment at Contig_76:357735..361354-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11360 ID=mRNA_11360|Name=jgi.p|Trimin1|170890|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3620bp|location=Sequence derived from alignment at Contig_76:357735..361354- (Tribonema minus UTEX_B_3156 )
ATGAGGCTGCAGAGGTGGAAAGAGTACGCCATCGTCATCGTCACAACACA GATTCTCTACGCCATCGGCAAGAGCATGACCTTCTATGCGCAGTACCTGC CAGCGGATGCCGAAAACCAGCAGCATTCCTTCCCTGTGAAGCTGGGGGAT GTCTGGTGCACCGCTAAGCAGCTGGCGCCGTGCTCCATAGGCTCTCCAGC AATACAGGCCATCCTGGCCGCTGCGCACGGGGACTGCTGCGCGCAGCTGT TGGCGGGTGAGCTGCCTCATGAGCAGGTTTCGACGTGGACTCTGGCGGCG CTGGTTCTGGTGATGCCGTCGGTGCTGCTGGTCGCACGACACTTTGCCAG CAAAGGTGAGCGCATTAGTGAACGAGTTGTTGGTTCTCTATCGGAGTGCC TCTTGCCTGAAGGGACAAGTAAGGTCAAGTAAAACGCTGAGGGCATGTCC GTGACCTGCAGGCTGACCGGCGACAACGACAGAGGTTCAATAGTATACGT GCCGAGTAAGTCAGTTCGATGTGTAAAGAGGATGGACTAAACAAAGCTGC TAGCTCTTGAGACTACATTTGTCGAAGGAGTTGCGCTGACACATGCTGTC GCATCAGCTTTTCTTTAATGAGGTCGACACCAACATACGGTCTTGTGCGC CGTGAGAGATGCATTCCGTGTTTCGTGCATAGCTTGATGGCTAGGTTGTC GGTTCCGTAGGAGACAACCGTCATCTTGTTTCATACCATCAGACAGGTCT TGCCATGCATGCCTTGTGACGCGCGAACCGTGTGCAAACACATCACATCA CACTATGTTGTTGATCATCACCAGCACCTGGACAGTTTTTTGGCTGTGTA CCTAGCACCTACATGAAGTGGCAGCCATCAAAAATATATGTACATCATGC CGTGCCGCCACAGACCGCAGCCAGCGTCACATCACTGTCTCAACCTAAGC ATACCCGACACATGACGAGGCTGTGCTTAACACGCGCCAGCTGCTGATGC TCTACCTCTCACACCTCCCCCCCTCCCCCCCTCCCCCCCCCTCCCCTCCG CCCCCCAGCCGGCCGCTACCCCGCGCGCCTCCCCTCCGGCGACGCCCTCC TGGGCTTCGTGGCAAGCGTCAGCTGGGTGGGCGTCGTCACCCTCTTCATC AAGAAAGCAGTTGGGCGGCCACGCCCCAACTTCCTGGCCCTTGGGGAGGT CATCGCGCAGAGCCCAGCGCTGGGGGGGGGGACGGGCAGGCTGGGGGGGA ACCCGCGCTACAGCTTCCCGAGCGGGCACGCGAGCACCAGCATGGCGGCG CTGCTGTACGGGGCGCTGGTGGCGTGGGGGGACGCGGGGGCGCTGCGCGG GCCGCGGTGGCAGCGCACGCTTGCGGTGAGAGTCGTATGGCGCGCCGCCG CTGCTGTCTCGCGTCTGAGCGATAAAGGAGGTATCGTCGCATACGATAGA GAACAGTTTGTGGCGACTTTGTGATGTGGGGGGGGGGCGGTGGCAGCGCA CGCTCGCGATGAGAGAGTCATATGGTGCCTCTGTGCTGTTTTGCAATGCG CAGGGAAGTGCCGTCACGCAGTGTGTAGAGAGCACTACGCGGCCCCTTTG TGATGCAGAGGGCGGGGGGGGGGCGGTGGCAGCGCACACTGGGGGGGGGG AGTAATCCGACGACTCTGCTTATTTGAGATGTGCGGCATCTTATCTACAG GGGAAGTGTCATGCGCTGTGTGTAGCGAGCTCGACGCGGTAACCTCCCGC TGCGGGGCGCGCGGTGGTTGCGCACGCTCGCGGTGAGACACCGCCGTTGC TGCTTTGAGGTGGGCGGTATTGTGGAAGCAACAGAGGTATCATTGCATAC AGTAGAGAGCACCACGTGGCAGTTCACCACTTTTGTAACGCTGGTAGAGC AGTATGTCTCACAGGAGCGCCCCTGCATGGCGGCGCTGCTGTATGTGGAA CCAGCGGCGAGAAGCGGGTGACGCAGTTGCAGCGCTCGGGTGACATTGTA CTCCGAAGTTTATGAAGTACATCTCAGACCGTCTGTCACAACTGGAGTTG CTGCAATTGTGCTGAAGTTTCCATCGAGGCCGGCTGAACTTGAAGCAGCC ATCTATGTGATTGATGTCGGTTGGCGCATTGTCATGCATTGTGCCTCACC GGTGGCAATGTCCGCATGGCATTCGGAGACAGCATGTGGTTGTGTGTGTC TGCTTTTACGTGGACTCGACTGTGGCACTCTCGCAGCGCACAAGAGACCG GCAAGGCGGATATGTAGGGTCAGCCTGACCCTATCCCTAACTCTCAACCC TGATCCTTGACTGTTGTATGTTTTAACACTAACCGAGTGAGCTTTGCCGC TACTTTGCCACGCATAGAGCCCATTTGTCGTGCTCACAAGGACCCAATGC GGTGACAGAATTGCGTGACTCATGTTACTCCTTGCCATTCTGCACTGCAG GTCACATTAATACTAGTGCTGCCGTTCCTGTCACTGTGGGTGGGCGTCAC ACGGATACAGGACTATTGTGAGTGCCAACAGAAAATAGCGAGATTCAAGT TGCCTTCTGCAGAATGACACTTCACCATTGCGCTTCATTGATCAGCACCT TCTGGCAGTTCCCTATTACAAGGCACATTAGTCACAGTACGGCGCTGATA TAGTGCTGCTTTAAGGGGCCTGCGGGGCTCTCTCTGGCGCACGGCCAATG TCTGCATATCAAGTGCGGCAACGCAACAGGTTCGCATGCAGACTTCAACC GCCCTCAGCCGTCAACTACCAAGTCGCTGTACTCATGATGTGAAGTTAAA CTTGAGGTAGCATACATGTAGCACAGGATGCACACATGACTGCACAAGTG CGCAGCACGTGATGATATGCTGCGTGGCGCAATCTGTATTCAGGGTTCTA TGCCACTGCAATGTGGACATGTGTGATGAAAGCGCTGGCATGAATTTAAC ATACCGCTGCATTGCACCAACATACTTGTATGAGCCAGAGTGCATGCATC CCTAGGAAGGCACAGCCGTAAGATGTCCCCTGTCGTAACGCCTGCCCAGG CTGCCGTTACCGTGGTCACATGCGCGTGCAATCCAAGTGTCGCGCGCGAC AGGCGTTTCAAGGCGCTTTTGTCCATCAGCTGGGCGCAGCGTCACACACG AATGGACAGCAAAGAGATGCTCACATCCATCGTGTTTTATGACCCCATCA GCAGAACATGTACACACTTCAACATACTGCTCGCAGCGCGCTGCCGGATC TGCCGTCATCGTGTTCGCAACGCGCTGCCAGATCTCCCGTCACCGCTGGG TCCTTGGCGCATTTGCTGTAGGCTTCGCTCTGCTATTTCACGCATCACCG TGGGACACCCCCCCTCCCCTCCGCTGCCTTTACATGCCTTACCACTGGTT GACTCCCCCCCGCCCCCCCCTCTGGCACCGCGCCGCAGGGCACTTCCAAG ACGACGTGGCTGCGGGCTGGCTGGTGGGCGCGCTGTCTGCGGTGCTGGGC CATGCGCTCGCCGCGCAGCCGCCGCCGCTGCAGCACGACGACGGCGACGG CGGCAGCGCGCGCTACCACTACCTGAGCCAGCACCTGCAGCTGCCCAACT CGCCAGAGGCGGCTGTGTGA
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Coding sequence (CDS) from alignment at Contig_76:357735..361354-

>mRNA_11360 ID=mRNA_11360|Name=jgi.p|Trimin1|170890|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=921bp|location=Sequence derived from alignment at Contig_76:357735..361354- (Tribonema minus UTEX_B_3156 )
ATGAGGCTGCAGAGGTGGAAAGAGTACGCCATCGTCATCGTCACAACACA
GATTCTCTACGCCATCGGCAAGAGCATGACCTTCTATGCGCAGTACCTGC
CAGCGGATGCCGAAAACCAGCAGCATTCCTTCCCTGTGAAGCTGGGGGAT
GTCTGGTGCACCGCTAAGCAGCTGGCGCCGTGCTCCATAGGCTCTCCAGC
AATACAGGCCATCCTGGCCGCTGCGCACGGGGACTGCTGCGCGCAGCTGT
TGGCGGGTGAGCTGCCTCATGAGCAGGTTTCGACGTGGACTCTGGCGGCG
CTGGTTCTGGTGATGCCGTCGGTGCTGCTGGTCGCACGACACTTTGCCAG
CAAAGCCGGCCGCTACCCCGCGCGCCTCCCCTCCGGCGACGCCCTCCTGG
GCTTCGTGGCAAGCGTCAGCTGGGTGGGCGTCGTCACCCTCTTCATCAAG
AAAGCAGTTGGGCGGCCACGCCCCAACTTCCTGGCCCTTGGGGAGGTCAT
CGCGCAGAGCCCAGCGCTGGGGGGGGGGACGGGCAGGCTGGGGGGGAACC
CGCGCTACAGCTTCCCGAGCGGGCACGCGAGCACCAGCATGGCGGCGCTG
CTGTACGGGGCGCTGGTGGCGTGGGGGGACGCGGGGGCGCTGCGCGGGCC
GCGGTGGCAGCGCACGCTTGCGGTCACATTAATACTAGTGCTGCCGTTCC
TGTCACTGTGGGTGGGCGTCACACGGATACAGGACTATTGGCACTTCCAA
GACGACGTGGCTGCGGGCTGGCTGGTGGGCGCGCTGTCTGCGGTGCTGGG
CCATGCGCTCGCCGCGCAGCCGCCGCCGCTGCAGCACGACGACGGCGACG
GCGGCAGCGCGCGCTACCACTACCTGAGCCAGCACCTGCAGCTGCCCAAC
TCGCCAGAGGCGGCTGTGTGA
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