mRNA_11360 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A835YK58_9STRA (Phosphatidic acid phosphatase type 2/haloperoxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK58_9STRA) HSP 1 Score: 617 bits (1592), Expect = 1.640e-223 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 1 Query: 1 MRLQRWKEYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPNSPEAAV 918 MRLQRWKEYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPNSPEAAV Sbjct: 1 MRLQRWKEYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPNSPEAAV 306
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: D7G5S0_ECTSI (Phosphatidic acid phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S0_ECTSI) HSP 1 Score: 167 bits (424), Expect = 5.780e-46 Identity = 98/269 (36.43%), Postives = 140/269 (52.04%), Query Frame = 1 Query: 4 RLQRWK--EYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAG--ALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVL 798 R++RW+ E+ V+V ++ + + Y Q++P + + + FPV LG WCTA L+ C+I S CC + AG+ PHE V + L + V+P+ + R +K G Y D +LG V + +T IK VGRPRPN+ AL ++ G L SFPSGH+S SMA + Y LV WGD A W+R+L L + +S++VGV+RI+D+WHFQDDV AGW +GA SA L Sbjct: 18 RIRRWRVPEFVGVVVGLAVVSLVQACFSEYEQFVPENNKEGINGFPVGLGAEWCTASDLSSCAIQS----------ESGCCKGMQAGKSPHETVDEFQLWFVYFVIPAAFVAVRQVLAKLGLYRGAASLADVILGLVFCLGLSVTLTDAIKFMVGRPRPNYAALRALVEHG---GSNVMSLKAKSIRSFPSGHSSMSMAGMFYVTLVCWGDLSRFAAENKSWRRSLLAYLSICPILISIYVGVSRIRDFWHFQDDVVAGWALGAASAAL 273
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A835ZFV7_9STRA (Phosphatidic acid phosphatase type 2/haloperoxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV7_9STRA) HSP 1 Score: 154 bits (388), Expect = 7.240e-43 Identity = 77/129 (59.69%), Postives = 93/129 (72.09%), Query Frame = 1 Query: 424 VGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGT-GRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHA 807 V + TLFIKK VGRPRPN+ AL EV+AQSPAL G+ G LGG+PR SFPS H+S +MAA + ALV WGDA GP W R LA + L+ ++WVG+TRIQDYWH DDV AGW +GAL A +G+A Sbjct: 4 VSIATLFIKKGVGRPRPNYAALVEVVAQSPALAAGSAGALGGHPRTSFPSAHSSHAMAAFGFFALVVWGDAARRVGPLWARNLAGMVALLSMACAIWVGMTRIQDYWHHPDDVFAGWALGALCAKIGYA 132
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A7S4DJ78_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJ78_HETAK) HSP 1 Score: 90.5 bits (223), Expect = 6.820e-17 Identity = 79/255 (30.98%), Postives = 122/255 (47.84%), Query Frame = 1 Query: 97 LPADAENQQHSFPVKLGDVWCTAKQLAPCSIGSPAIQAILAAAHGDCCAQLLAGELPHEQVSTWTLAALVLVMPSVLLVARHFASK-AGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQ----RTLAVTLI--LVLPF---LSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPL 831 +P N HSFP+++ +WCTA C + IL ++ G C AQ +P Q+ W L+ +P + ++ R F + + P R+ D+L+ ++ V + T F+K VG PRPN+ AL A GG+ G SFPS HAS SM + + AL+ D LR P + R A +L+ L F +++V +R++D++HF DVA G +G +A+ G PPL Sbjct: 36 VPVSLTNSDHSFPLRVDGIWCTAADFEAC-------EGILTSS-GCCSAQHYEEIIPGTQLQ-W----LLRYIPLIFILGRFFLLRLTKKMPVRI-FFDSLVALFSTWLAVEITTGFLKNFVGYPRPNYYAL---RAYKRLNDGGSD---GAANQSFPSSHASYSMGGMAFVALLLLQDWQHLRAPAQKGGPPRLPAGSLLPHLAASFPLAYAVFVAASRVRDHFHFPADVATGMALGLGAALFGLRCGGDSPPL 270
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A8J9RHY0_9CHLO (Phospholipid phosphatase 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RHY0_9CHLO) HSP 1 Score: 85.5 bits (210), Expect = 2.380e-15 Identity = 63/191 (32.98%), Postives = 92/191 (48.17%), Query Frame = 1 Query: 262 LPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFL-------------ALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALR-----GPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVG 780 L + V +W++ + L P+ +++A + R+ RL +A+L + V ++T IK VGRPRPNF+ GE + A+ GR SFPSGH S S + L Y L W G LR G W+ V LV ++W+G+TR+QDYWH +DV AG+L+G Sbjct: 100 LHKDSVPSWSVPVIALCGPAAVIIAHSYI----RHTPRLEVHNAVLNALMCVITTALITNLIKLGVGRPRPNFMMQCWPGGDVQWDATSGEALCSKNAINPAEGRK------SFPSGHTSWSTSGLGY--LTFWLG-GKLRIYDGTGHSWR----VPASLVPLGGAVWIGITRLQDYWHHWEDVTAGFLLG 273
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A446XK62_TRITD (acidPPc domain-containing protein n=2 Tax=Triticum TaxID=4564 RepID=A0A446XK62_TRITD) HSP 1 Score: 79.3 bits (194), Expect = 1.750e-13 Identity = 67/209 (32.06%), Postives = 98/209 (46.89%), Query Frame = 1 Query: 262 LPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGD---ALLGFVASVSWVGVVTLFIKKAVGRPRPNFL-------------ALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSL-WVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQH 837 + V W + + +V+P V +V G Y R D A+LG + SV +VT+ IK AVGRPRP+F G+VI G G + + SFPSGHAS + A L + ++W AG ++ + +A I++LP LS V V+R+ DYWH DV AG ++G + A + PP +H Sbjct: 67 MKRSTVPDWAVPVIAVVVPMVFIV--------GIYIKRRNVYDLHHAILGLLFSVLITAIVTVAIKDAVGRPRPDFFWRCFPDGVPKYDNVTGDVICH-----GKPGAIKEGYK-SFPSGHASGAFAGLGF---LSWYLAGKMKAFDRRGHIAKLCIVLLPLLSATMVAVSRVTDYWHHWQDVFAGGVLGWVVASFCYLQFFPPPYSEH 258
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: E1Z8S6_CHLVA (acidPPc domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z8S6_CHLVA) HSP 1 Score: 78.6 bits (192), Expect = 2.320e-13 Identity = 59/182 (32.42%), Postives = 85/182 (46.70%), Query Frame = 1 Query: 274 QVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLALGEVIAQSPALG-GGTGRLGGNP------RYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVL 798 QV W + + L P + ++ A + R A A L V+ V+ G++T +IK VGRPRP+F+ P G + N SFPSGH S S + L Y L G G L V + +L ++W+G++R+QDYWH +DVAAG+ +G L A L Sbjct: 14 QVPAWAVPCVALFSPLLCIMGFRLAGRISRVEAH----HASLMAVSCVATTGLLTNWIKINVGRPRPHFVHRCWPNGTKPVYTPDGLPKCADNAINVAEGLKSFPSGHTSWSTSGLGYLTLWLLGKLNCFDGQAQPTRLVVAFVPLLG--AVWIGMSRVQDYWHHVEDVAAGFCLGLLLAYL 189
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: I0YT05_COCSC (PAP2-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YT05_COCSC) HSP 1 Score: 79.3 bits (194), Expect = 3.470e-13 Identity = 63/192 (32.81%), Postives = 92/192 (47.92%), Query Frame = 1 Query: 262 LPHEQVSTWTLAALVLVMPSVLLVAR-HFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFLAL-------------GEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALR-----GPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVG 780 L + V +W++ + L P+ + +A H A RL +A+L + V ++T +K VGRPRPNF+ GE + + A+ GR SFPSGH S S + L Y L W AG LR G W+ + LV ++W+G+TR+QDYWH +DV AG+L+G Sbjct: 100 LHKDSVPSWSVPVISLCGPAAVFIAYFHIADT-----PRLEVHNAVLNGLMCVITTALITNLVKLGVGRPRPNFMMQCWPDGLVKWNEDSGEALCSTNAIDPAEGRK------SFPSGHTSWSTSGLGY--LTFW-LAGKLRIYDGSGHSWRLPAS----LVPLGGAVWIGITRLQDYWHHWEDVTAGFLLG 273
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A8K0H272_9ROSA (Uncharacterized protein n=2 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0H272_9ROSA) HSP 1 Score: 79.0 bits (193), Expect = 5.320e-13 Identity = 71/228 (31.14%), Postives = 100/228 (43.86%), Query Frame = 1 Query: 262 LPHEQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFL------------ALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGAL-RGPRWQRTLAVTLILVLPFLSLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPNSP 906 L V W + +++P V+ + +F + Y A+LG + S V+T+ IK AVGRPRP+F G+VI G + SFPSGH S S A L + +L G RG + V L L++ L VG++R+ DYWH DV AG L+G A + L PPP HD+G G A + L + + SP Sbjct: 84 LKDNTVPGWAVPMYAVLLPIVIFLVVYFRRR-DVYDLH----HAILGLLFSFLVTAVITVSIKNAVGRPRPDFFWQCFPDGKDVYDKWGDVICH------GDKSVIREGHKSFPSGHTSGSFAGLGFLSLYLSGKIKVFDRGGHIAKLCIVFLPLLVASL---VGISRVDDYWHHWQDVFAGGLIGLTVATFCY-LQFFPPPY-HDEGWGPYAYFRVLEESRRNTQSP 295
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Match: A0A6P5Y9V6_DURZI (lipid phosphate phosphatase 2-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5Y9V6_DURZI) HSP 1 Score: 77.8 bits (190), Expect = 9.000e-13 Identity = 70/226 (30.97%), Postives = 101/226 (44.69%), Query Frame = 1 Query: 271 EQVSTWTLAALVLVMPSVLLVARHFASKAGRYPARLPSGDALLGFVASVSWVGVVTLFIKKAVGRPRPNFL-------------ALGEVIAQSPALGGGTGRLGGNPRYSFPSGHASTSMAALLYGALVAWGDAGALRGPRWQRTLAVTLILVLPFL-SLWVGVTRIQDYWHFQDDVAAGWLVGALSAVLGHALAAQPPPLQHDDGDGGSARYHYLSQHLQLPNSP 906 + + W + L +++P V+ ++ K Y A+LG + SV GV+T IK VGRPRPNF G+VI A G SFPSGH S S A L + ++W +G +R + +A IL P L + +VGV+R+ DYWH DV G L+G+ A + L P P + +DG A + L+ SP Sbjct: 64 DTIPFWAVPFLAVLLPLVVFSINYYFRK-DVYDFH----HAILGLLFSVLLTGVITDSIKDVVGRPRPNFFWRCFPDGKAVFDKITGDVICHGNAKDIKEGYK------SFPSGHTSWSFAGLSF---LSWYLSGKIRAFDRRGHVAKLCILFFPVLVAAFVGVSRVDDYWHHWTDVFTGALIGSTMAAFCY-LQFFPYP-RDEDGWAPHAYFQMLTDRNNGAKSP 273 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170890 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11360 ID=mRNA_11360|Name=jgi.p|Trimin1|170890|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=921bp|location=Sequence derived from alignment at Contig_76:357735..361354- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGGCTGCAGAGGTGGAAAGAGTACGCCATCGTCATCGTCACAACACAback to top protein sequence of jgi.p|Trimin1|170890 >Trimin1|170890|e_gw1.76.101.1 ID=Trimin1|170890|e_gw1.76.101.1|Name=jgi.p|Trimin1|170890|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=307bp MRLQRWKEYAIVIVTTQILYAIGKSMTFYAQYLPADAENQQHSFPVKLGDback to top mRNA from alignment at Contig_76:357735..361354- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11360 ID=mRNA_11360|Name=jgi.p|Trimin1|170890|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3620bp|location=Sequence derived from alignment at Contig_76:357735..361354- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_76:357735..361354- >mRNA_11360 ID=mRNA_11360|Name=jgi.p|Trimin1|170890|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=921bp|location=Sequence derived from alignment at Contig_76:357735..361354- (Tribonema minus UTEX_B_3156 )back to top |