mRNA_11314 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352367
Unique Name	mRNA_11314
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A835ZFT2_9STRA (Transcription elongation factor 1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT2_9STRA)

HSP 1 Score: 194 bits (493), Expect = 7.010e-62
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 3

Query:   48 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAANQELDREXXXXXXXXXXXXXXXXXXXXXXDGEDSDI 404
            MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAANQELDREXXXXXXXXXXXXXXXXXXXXXXDGEDSDI
Sbjct:    1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAANQELDREXXXXXXXXXXXXXXXXXXXXXXDGEDSDI 119

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: D7FVV5_ECTSI (Transcription elongation factor 1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV5_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.660e-29
Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 3

Query:   48 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAAN 299
            MGRRK STKKI  KK  TLD  FKCPFC HDKVV+CTMN K+    L CR CD  Y   INYL+EPID++T+WID  EA +A +
Sbjct:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNAVD 84

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A485LI04_9STRA (Transcription elongation factor 1 homolog n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LI04_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.980e-26
Identity = 49/83 (59.04%), Postives = 57/83 (68.67%), Query Frame = 3

Query:   48 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAA 296
            MGRRK+STKKI  +K+  +   FKCPFC HD  VQC M+   NVG L CR C   Y T INYLSEPID++T+WID  EA H A
Sbjct:    1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLSCRVCSESYQTNINYLSEPIDVYTDWIDECEALHTA 83

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A024U4B4_9STRA (Transcription elongation factor 1 homolog n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4B4_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.240e-25
Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 3

Query:   48 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHA 293
            MGRRK+STKKI  +K+  +   FKCPFC HD  VQC M+   NVG L CR C   Y + INYLSEPID++T+WID  EA H+
Sbjct:    1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLTCRICSESYQSNINYLSEPIDVYTDWIDECEALHS 82

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A8J2WXL7_9STRA (Transcription elongation factor 1 homolog n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXL7_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 7.350e-24
Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 3

Query:   48 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAE 287
            MGRR++   K+  KK+PT+ T FKCPFC ++K V   M++    GTL+CR C   Y+  INYLSEP+D+F+EWID  EAE
Sbjct:    1 MGRRRAKATKVVKKKQPTMQTEFKCPFCNYEKCVAAKMDYDKETGTLECRVCAATYTATINYLSEPVDVFSEWIDQCEAE 80

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: F0YA60_AURAN (Transcription elongation factor 1 homolog (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA60_AURAN)

HSP 1 Score: 96.7 bits (239), Expect = 9.030e-24
Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 3

Query:   48 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAE 281
            MGRR++  +K+  KK+P + T FKCPFC H+  V+C ++++   G+L+CR C   YS  +NYLSEPIDIF+EWID  E
Sbjct:    1 MGRRRAKAQKVVKKKKPVMLTEFKCPFCNHEGAVECKIDYEKESGSLECRVCGASYSATVNYLSEPIDIFSEWIDHCE 78

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A2P6V099_9CHLO (Transcription elongation factor 1 homolog n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V099_9CHLO)

HSP 1 Score: 96.7 bits (239), Expect = 1.040e-23
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 3

Query:   48 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAA 296
            MG+RKSS K    K+RP L+T+F CPFC  DK V C M+ + NVG ++C +C   +ST I+ LSEPID+++EWIDA EAE+A+
Sbjct:    1 MGKRKSSAKAPPKKQRPKLETTFACPFCNADKSVGCEMDREKNVGAVRCTQCKAAWSTKIHQLSEPIDVYSEWIDACEAENAS 83

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A7S2G0L4_9STRA (Transcription elongation factor 1 homolog (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0L4_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.360e-22
Identity = 42/82 (51.22%), Postives = 61/82 (74.39%), Query Frame = 3

Query:   45 TMGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEH 290
            TMGRRK++ KK+  KKRPT+  +FKC FC H+  V+C +N ++ +G L+CR C   + T I+YLSE +D+F+EWID+ EAE+
Sbjct:   28 TMGRRKTAMKKLK-KKRPTVAQTFKCLFCNHEDAVECELNHREKIGKLKCRICGADWETRIHYLSEAVDVFSEWIDSTEAEN 108

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A2P6TL08_CHLSO (Transcription elongation factor 1 homolog n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TL08_CHLSO)

HSP 1 Score: 92.4 bits (228), Expect = 4.820e-22
Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 3

Query:   48 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAA 296
            MG+RKSS K    K RP L+T+F CPFC  DK V C ++ + NVG ++C +C   ++T I+ LSEPID+++EWIDA E E+A+
Sbjct:    1 MGKRKSSAKPPPKKARPKLETTFACPFCNADKSVSCELDRETNVGAVKCSQCKAAWTTKIHQLSEPIDVYSEWIDACEEENAS 83

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A0D2KVK8_9CHLO (Transcription elongation factor 1 homolog n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KVK8_9CHLO)

HSP 1 Score: 92.0 bits (227), Expect = 6.640e-22
Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 3

Query:   48 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHA 293
            MG+RKSS K       P LDTSF CPFC   K VQCTM+++   GT++C  C   +S+ IN+LSEPIDI+++W+DA E+ +A
Sbjct:    1 MGKRKSSAKPPPKAPAPKLDTSFNCPFCNSTKTVQCTMDWERQEGTVECVHCKESFSSKINHLSEPIDIYSDWLDACESANA 82

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A836CMJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMJ9_9STRA)

HSP 1 Score: 476 bits (1225), Expect = 8.060e-167
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1

Query:   19 MPSSSRPRTSSWLLLLLSLSPAASSAWAFVPSAPAFGRALGPSSLRLATSESPAADAAATSGSDAVSYETLQELRLFRAADGTQVALGSLWGEHDTAVVAFLRLKKDWAPRLDWSKLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQSAW 738
            MPSSSRPRTSSWLLLLLSLSPAASSAWAFVPSAPAFGRALGPSSLRLATSESPAADAAATSGSDAVSYETLQELRLFRAADGTQVALGSLWGEHDTAVVAFLRLKKDWAPRLDWSKLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQSAW
Sbjct:    1 MPSSSRPRTSSWLLLLLSLSPAASSAWAFVPSAPAFGRALGPSSLRLATSESPAADAAATSGSDAVSYETLQELRLFRAADGTQVALGSLWGEHDTAVVAFLRLKKDWAPRLDWSKLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQSAW 240

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A6A2XLG6_HIBSY (Detected protein of confused Function n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XLG6_HIBSY)

HSP 1 Score: 105 bits (262), Expect = 2.250e-22
Identity = 75/213 (35.21%), Postives = 107/213 (50.23%), Query Frame = 1

Query:  127 GRALGPSSLRLATSESPAADAAATSGSDAVSYETLQELRLFRAADGTQVALGSLWGEHD-TAVVAFLR------------LKKDWAPRLDWS--KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRY-IKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLE 717
            G A G S   +  S SPA + +   G      + L E+ +F A+ G  V    LW +++  AVVAFLR            + K+  P+ D +  KLIVVG+GTPDKA    + + FP+  LY DP+  AY   G+ YG G  +  F   ++        + +AM  Y IK  PD    V QQGG+  FKG +L +  +D+G G HA L D+ +
Sbjct:   47 GNAGGNSRFMVKVSSSPAPEFSTNIG------DILGEVTVFTAS-GQPVLFRDLWDQNEGVAVVAFLRHFGCFCCWELASVLKEAMPKFDSAGVKLIVVGVGTPDKARILAERVPFPMDSLYADPERKAYDVLGLYYGLGRTF--FNPASAKVFSRVDQVKKAMENYTIKATPDDVSSVLQQGGMFVFKGNQLLYARKDEGTGDHAPLDDIFD 250

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A6I9T0M8_SESIN (thioredoxin-like protein AAED1, chloroplastic isoform X1 n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9T0M8_SESIN)

HSP 1 Score: 96.7 bits (239), Expect = 3.320e-19
Identity = 65/183 (35.52%), Postives = 93/183 (50.82%), Query Frame = 1

Query:  223 ETLQELRLFRAADGTQVALGSLWGEHD-TAVVAFLR------------LKKDWAPRLDWS--KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMD---EAMRRY-IKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVL 714
            + L E+ +F AA G  V    LW + +  AVVA LR              ++   + D +  KLIVVG+GTPDKA    + L FP+  L+ DPD  AY   G+ YG    +L+        T+    +D   +AM+ Y IK  PD    V QQGG+  FKG++L +  +++G G HA L D+ 
Sbjct:   73 DVLGEVSIFTAA-GEPVKFKDLWDQKEGMAVVALLRHFGCFFCWEFAEALRESKEKFDLAGVKLIVVGVGTPDKAQILAERLPFPLDSLFADPDHKAYDILGLYYGLRRTFLN-----PASTKVFSRVDALKKAMKNYTIKATPDDRSSVLQQGGMFVFKGKQLLYARKEEGSGDHAPLDDIF 249

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A4RRX9_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RRX9_OSTLU)

HSP 1 Score: 87.4 bits (215), Expect = 2.060e-16
Identity = 57/176 (32.39%), Postives = 88/176 (50.00%), Query Frame = 1

Query:  223 ETLQELRLFRAADGTQVALGSLWGEHDTAVVAFLRLKKDWAPRLDWS--KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDE----AMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQS 732
            E L+ + + RA DG +V +  + G   T V A + L +D  P LD +  +L+VV IGT ++A  F +  DFPI+LLY D +++ Y A  +  G  + ++   T  S   R      +     ++R+    P +P+   QQGG   F+     +V  D   G HA L D+ EA G S
Sbjct:   23 EALRAVEVMRAIDGARVTVPEVVGARGTVVRA-VELARDAIPTLDAAGVRLVVVSIGTLERAKDFSRENDFPIELLYADAESATYEALKLRKGAKQTFMEKSTPESILKRWNKDGAKDLLGVLKRWKPWLPPRPDQGYQQGGSFVFRDGVATYVSYDVSTGAHAPLDDIFEAAGVS 197

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A835TML9_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TML9_CHLIN)

HSP 1 Score: 73.6 bits (179), Expect = 1.680e-11
Identity = 41/126 (32.54%), Postives = 62/126 (49.21%), Query Frame = 1

Query:  364 KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSF---QTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQS 732
            KL+VV IGTP+   +F  A+ FP++LL  DPD   Y          +G+++    +T  +   R          +Y  I P   +  +  GGV      ++ + HRD+GPG+HA + DVL A G S
Sbjct:   76 KLVVVSIGTPEGGRQFCSAVPFPLELLLLDPDHKLYDHLNC----HQGFMAMFGAKTWGAIRARGWNEFKSLFNKYEMIKPKSIKSTSIMGGVFVLHNGKVLYEHRDEGPGVHAPIKDVLAACGAS 197

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A1Y5I2X2_OSTTA (AhpC/TSA antioxidant enzyme-domain-containing protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I2X2_OSTTA)

HSP 1 Score: 67.8 bits (164), Expect = 3.580e-10
Identity = 38/124 (30.65%), Postives = 62/124 (50.00%), Query Frame = 1

Query:  361 SKLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDE----AMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEA 720
            ++L+VV IGT ++A  F +   FPI+ LY D  +  Y A  +  G    ++   T  S   R + +  +     ++R+    P +P+   QQGG   F+G +  +V  D+  G HA L D+L A
Sbjct:    3 ARLVVVSIGTLERAKDFARENAFPIEYLYADEQSETYDALKLNKGVDATFMRKSTPESILARWKDNGAKDLLGVLKRWKPWLPPRPDQGYQQGGSFVFRGSKTVYVSYDESTGAHAPLEDILRA 126

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A835TPB7_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TPB7_CHLIN)

HSP 1 Score: 66.2 bits (160), Expect = 1.010e-8
Identity = 39/117 (33.33%), Postives = 55/117 (47.01%), Query Frame = 1

Query:  364 KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVL 714
            KL+VV IGTP+   +F   L FP +LL  DPD   Y       G  +   S +T  +   R        + +Y  I P   +     GGV      ++ F +RD+GPG+HA + DVL
Sbjct:  121 KLVVVSIGTPEGGRQFCSTLPFPPELLLLDPDYKLYGHLKCYEGF-KAMFSPKTWDAMKAREWNEFKALLDKYKMIAPKSMDSTAVMGGVFVLDNGKVLFEYRDEGPGVHAPMKDVL 236

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: K8F561_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F561_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 5.450e-8
Identity = 40/135 (29.63%), Postives = 59/135 (43.70%), Query Frame = 1

Query:  364 KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRP----HMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGR----------ELAFVHRDQGPGMHADLPDVLEAIG 726
            KLIV+ IGT ++A  F +  +FP+++LY DP    Y    + +G  E      T  S   R R      + + ++R+    P K E   QQGG   F  +          E  +   D   G HA   ++LEA G
Sbjct:   10 KLIVISIGTEERARDFCRENEFPMEILYADPINVTYDKLRLNFGVKETLFDASTPYSIAERIREGKIKELTDVLKRWKPWIPPKREQGLQQGGTFVFDTKRIKGDSEVEYECVYDWYDPSTGAHAPAEEILEACG 144

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A835T684_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T684_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 8.560e-8
Identity = 36/117 (30.77%), Postives = 54/117 (46.15%), Query Frame = 1

Query:  364 KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVL 714
            KL+V+ IGTP+   +F   L FP +LL  DPD   Y       G  +   S +T  +   R        + +Y  I P   +     GG+      ++ + HRD GPG+HA + +VL
Sbjct:  124 KLVVISIGTPEGGRQFCSTLPFPPELLLLDPDYKLYGHLKCYEGF-KAMFSPKTWDAMKAREWNEFKALLDKYKMIAPKSVDSTAVMGGLFVLDNGKVLYEHRDDGPGVHAPMKEVL 239

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BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: E1ZCF6_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZCF6_CHLVA)

HSP 1 Score: 55.1 bits (131), Expect = 8.210e-5
Identity = 55/232 (23.71%), Postives = 85/232 (36.64%), Query Frame = 1

Query:  211 AVSYETLQELRLFRAADGTQVALGSLWGEHDTAVVAFLRLKKDWAPRLDWSKL--IVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATG-------------------MIYGTGE---------GYLS-------------------------------FQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAI 723
            A S E +    L++A  GT+  +  L    D +     +      P L  S +  + VG+G P+KA KF + L FP+ LLY DP  + Y+A                     M+ G G          GY+                                +Q      T    +M+  +  + ++ P     + QQGG LAF GR+  F H D G   +AD+  +  A+
Sbjct:   35 AASGEEVALTSLWQAQPGTRCVVACLTHFGDLSSTECAQKLLAVLPELRASGVGVLAVGLGEPEKARKFAELLGFPLDLLYADPTGALYSALAFSPGFAPETRISAYAKLLVMLAGVGSPGTIQEVLRGYVGDRSAKPVFTSGXXXXXXXXXXXNLFDVLGRGYQRPFELATLRLYNMNLVLSHWNELAPADERLLTQQGGCLAFDGRQTIFRHTDTGILKYADIDALAAAV 266

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352367 vs. uniprot
BLAST of jgi.p|Trimin1|352367 vs. uniprot

BLAST of jgi.p|Trimin1|352367 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZFT2_9STRA	7.010e-62	100.00	Transcription elongation factor 1 homolog n=1 Tax=...	[more]
D7FVV5_ECTSI	1.660e-29	61.90	Transcription elongation factor 1 homolog n=2 Tax=...	[more]
A0A485LI04_9STRA	1.980e-26	59.04	Transcription elongation factor 1 homolog n=6 Tax=...	[more]
A0A024U4B4_9STRA	3.240e-25	57.32	Transcription elongation factor 1 homolog n=3 Tax=...	[more]
A0A8J2WXL7_9STRA	7.350e-24	52.50	Transcription elongation factor 1 homolog n=1 Tax=...	[more]
F0YA60_AURAN	9.030e-24	51.28	Transcription elongation factor 1 homolog (Fragmen...	[more]
A0A2P6V099_9CHLO	1.040e-23	54.22	Transcription elongation factor 1 homolog n=1 Tax=...	[more]
A0A7S2G0L4_9STRA	2.360e-22	51.22	Transcription elongation factor 1 homolog (Fragmen...	[more]
A0A2P6TL08_CHLSO	4.820e-22	50.60	Transcription elongation factor 1 homolog n=1 Tax=...	[more]
A0A0D2KVK8_9CHLO	6.640e-22	51.22	Transcription elongation factor 1 homolog n=1 Tax=...	[more]

Pages

BLAST of jgi.p|Trimin1|352367 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
A0A836CMJ9_9STRA	8.060e-167	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6A2XLG6_HIBSY	2.250e-22	35.21	Detected protein of confused Function n=1 Tax=Hibi...	[more]
A0A6I9T0M8_SESIN	3.320e-19	35.52	thioredoxin-like protein AAED1, chloroplastic isof...	[more]
A4RRX9_OSTLU	2.060e-16	32.39	Uncharacterized protein n=1 Tax=Ostreococcus lucim...	[more]
A0A835TML9_CHLIN	1.680e-11	32.54	Uncharacterized protein n=1 Tax=Chlamydomonas ince...	[more]
A0A1Y5I2X2_OSTTA	3.580e-10	30.65	AhpC/TSA antioxidant enzyme-domain-containing prot...	[more]
A0A835TPB7_CHLIN	1.010e-8	33.33	Uncharacterized protein n=1 Tax=Chlamydomonas ince...	[more]
K8F561_9CHLO	5.450e-8	29.63	Uncharacterized protein n=1 Tax=Bathycoccus prasin...	[more]
A0A835T684_9CHLO	8.560e-8	30.77	Uncharacterized protein n=1 Tax=Chlamydomonas schl...	[more]
E1ZCF6_CHLVA	8.210e-5	23.71	Uncharacterized protein n=1 Tax=Chlorella variabil...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_116	contig	Contig_116:431880..433429 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352367\|estExt_Genemark1.C_Ctg_1160072
BRITE	ko00000,ko01000,ko01002
KEGG ko	ko:K13617
EC	3.1.1.89
GOs	GO:0000993,GO:0001098,GO:0001099,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006325,GO:0006338,GO:0006351,GO:0006354,GO:0006355,GO:0006366,GO:0006368,GO:0006725,GO:0006807,GO:0006996,GO:0008023,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0040029,GO:0043167,GO:0043169,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045815,GO:0045893,GO:0045935,GO:0046483,GO:0046872,GO:0046914,GO:0048096,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0070063,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Preferred name	ELOF1
Description	chromatin-mediated maintenance of transcription
COG category	K
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG4888@1\|root,KOG3214@2759\|Eukaryota
Evalue	1.57e-30
Seed ortholog	2880.D7FVV5
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Transcription elongation factor 1
Ec32 ortholog	Ec-01_002290.1
TranscriptId	352689
Track	FilteredModels1
ProteinId	352367

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352367	gene_11314	Tribonema minus UTEX_B_3156	gene	Contig_116 431880..433429 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352367	Trimin1\|352367\|estExt_Genemark1.C_Ctg_1160072	Tribonema minus UTEX_B_3156	polypeptide	Contig_116 431880..433276 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11314_4	exon_11314_4	Tribonema minus UTEX_B_3156	exon	Contig_116 431880..432069 -
exon_11314_3	exon_11314_3	Tribonema minus UTEX_B_3156	exon	Contig_116 432711..432767 -
exon_11314_2	exon_11314_2	Tribonema minus UTEX_B_3156	exon	Contig_116 433164..433289 -
exon_11314_1	exon_11314_1	Tribonema minus UTEX_B_3156	exon	Contig_116 433396..433429 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11314	CDS_11314	Tribonema minus UTEX_B_3156	CDS	Contig_116 433164..433276 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_11314	UTR5_11314	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_116 433396..433429 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_116:431880..433429-
coding sequence from alignment at Contig_116:431880..433429-

spliced messenger RNA

>mRNA_11314 ID=mRNA_11314|Name=jgi.p|Trimin1|352367|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=407bp|location=Sequence derived from alignment at Contig_116:431880..433429- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGGCACACTGCGGGGTTCCCATCGACACTGCAGATACACAGCAACCATG
GGCCGGAGAAAGAGCAGTACGAAGAAGATATCCAATAAGAAGCGGCCGAC
ATTGGATACAAGCTTCAAGTGTCCATTCTGCTGCCACGACAAAGTCGTTC
AGTGCACAATGAACTTCAAGGACAATGTGGGGACGCTGCAGTGCCGGAGA
TGCGACACCAAGTACAGCACCGTCATCAACTACCTCTCAGAGCCCATCGA
CATCTTCACGGAGTGGATAGACGCCGCCGAGGCGGAGCACGCGGCGAACC
AGGAGTTGGACAGGGAGGATGAGGAGGGGGAAGGGGGGGAGGGGGGCGGC
AGCAGCAGGGCGGCGGCAGCGGCGGCGGCGTCGGACGGCGAAGATAGCGA
TATATGA

protein sequence of jgi.p|Trimin1|352367

>Trimin1|352367|estExt_Genemark1.C_Ctg_1160072 ID=Trimin1|352367|estExt_Genemark1.C_Ctg_1160072|Name=jgi.p|Trimin1|352367|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=120bp
MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCR
RCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAANQELDREDEEGEGGEGG
GSSRAAAAAAASDGEDSDI*

mRNA from alignment at Contig_116:431880..433429-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11314 ID=mRNA_11314|Name=jgi.p|Trimin1|352367|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1550bp|location=Sequence derived from alignment at Contig_116:431880..433429- (Tribonema minus UTEX_B_3156 )
CAGGCACACTGCGGGGTTCCCATCGACACTGCAGGTGAGTGTGATGTGCT
CGTCGAATGCTTTGATTTGACACCGATGGCGTCGTGTGCGTGTCTAGACA
CATCCGACATATCACTCTCCATTGCTGTGCTTCGCCACAGATACACAGCA
ACCATGGGCCGGAGAAAGAGCAGTACGAAGAAGATATCCAATAAGAAGCG
GCCGACATTGGATACAAGCTTCAAGTGTCCATTCTGCTGCCACGACAAAG
TCGTTCAGTGCACAATGTAAGTGAAGCAGTTCGACTGGATGTGTTCATCC
GCTCAAAGCGCCAGCGCCGAGTGACCATCATATCCTCGGCACTCAGCAGC
AATGTTGCCTGCTCAACCGAAGGCCATTCACGCCGTTCACATATCAGGTC
TGTAGGTGCTGCAGAATGCTGTAGTCGCGTACTTCTGTTAACGCCGATTG
CAACCTCAGGCTGGTTGCCGAGTGTCACTACATTGTCAGTGCTGCAGTTT
CTCTAGTCTGCTTCTTTGTACACTCACGTCTGCCATGGCCAGGTGACTGC
GTCAGCTGTAAAGCAAGTGCCATTGCTTCCATTGGTACAGTGAGGCAACG
GCCTACACCACTTCCACATCTACATGCTCACAGAATATTGTGCACTTCGT
TTCTCTGTACAGGAACTTCAAGGACAATGTGGGGACGCTGCAGTGCCGGA
GATGCGACACCAAGTACAGGTGAGAGCAGCACTGACCAGTGTCAGGATAT
GGAATGGCCAGGCTTTCACTCCCTTCCGCCATTGCCGTGCATGTCCTAGA
CTGCCTGTGCAGGCCATCAGCGATTTGTCTGTGCTCCTCTATTTTATTCC
GTCTTTGCTCTGATCCATTACGGATTGCGAATTGGTGGCAATGCAGGGGC
AGTGCTGCTGGCCTTGCTGGTGTTGCACATGATGTCTGTATGTGTGCTGC
ATGCAACACGAGAGTGAAAGCAGTGCACCTGGCATCTCTGCATGGCGCGG
CAGGTGATTTTTGTGTGTGTATTGCATGCACCACAAGAGTCACATGCAGG
GGCAGTTAACGTACGCGTACATACCACCAGCACCGAGGCGCTTTCAGCGG
CAAGGACGAGGCAGAGCTACTAGTGATTTCGCAGGTCTACACGCGAGCAT
GTCTGGCAAACAGGCAAGGGGACGCATGCGCGGTGGCAGGTCGACTGGTC
CTTCTGCACCGAACAGGGGGGGGGATGAGAGCACGTTCGCGCGCAAGCGC
AGAGGTCCCGCGCACCCCCGACCCCCCTGTGCGCACTACCTACTCACTCC
GCTGTGCGCGACTCTGCTCACTTCACGCATCCCTCAAACGCGTGCGCGCG
CGCGCCGCAGCACCGTCATCAACTACCTCTCAGAGCCCATCGACATCTTC
ACGGAGTGGATAGACGCCGCCGAGGCGGAGCACGCGGCGAACCAGGAGTT
GGACAGGGAGGATGAGGAGGGGGAAGGGGGGGAGGGGGGCGGCAGCAGCA
GGGCGGCGGCAGCGGCGGCGGCGTCGGACGGCGAAGATAGCGATATATGA

Coding sequence (CDS) from alignment at Contig_116:431880..433429-

>mRNA_11314 ID=mRNA_11314|Name=jgi.p|Trimin1|352367|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=360bp|location=Sequence derived from alignment at Contig_116:431880..433429- (Tribonema minus UTEX_B_3156 )
ATGGGCCGGAGAAAGAGCAGTACGAAGAAGATATCCAATAAGAAGCGGCC
GACATTGGATACAAGCTTCAAGTGTCCATTCTGCTGCCACGACAAAGTCG
TTCAGTGCACAATGAACTTCAAGGACAATGTGGGGACGCTGCAGTGCCGG
AGATGCGACACCAAGTACAGCACCGTCATCAACTACCTCTCAGAGCCCAT
CGACATCTTCACGGAGTGGATAGACGCCGCCGAGGCGGAGCACGCGGCGA
ACCAGGAGTTGGACAGGGAGGATGAGGAGGGGGAAGGGGGGGAGGGGGGC
GGCAGCAGCAGGGCGGCGGCAGCGGCGGCGGCGTCGGACGGCGAAGATAG
CGATATATGA