Trimin1|352367|estExt_Genemark1.C_Ctg_1160072 (polypeptide) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A835ZFT2_9STRA (Transcription elongation factor 1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT2_9STRA) HSP 1 Score: 194 bits (493), Expect = 3.840e-62 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 Query: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAANQELDREXXXXXXXXXXXXXXXXXXXXXXDGEDSDI 119 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAANQELDREXXXXXXXXXXXXXXXXXXXXXXDGEDSDI Sbjct: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAANQELDREXXXXXXXXXXXXXXXXXXXXXXDGEDSDI 119
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: D7FVV5_ECTSI (Transcription elongation factor 1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV5_ECTSI) HSP 1 Score: 112 bits (279), Expect = 9.580e-30 Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 0 Query: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAAN 84 MGRRK STKKI KK TLD FKCPFC HDKVV+CTMN K+ L CR CD Y INYL+EPID++T+WID EA +A + Sbjct: 1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNAVD 84
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A485LI04_9STRA (Transcription elongation factor 1 homolog n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LI04_9STRA) HSP 1 Score: 103 bits (257), Expect = 1.160e-26 Identity = 49/83 (59.04%), Postives = 57/83 (68.67%), Query Frame = 0 Query: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAA 83 MGRRK+STKKI +K+ + FKCPFC HD VQC M+ NVG L CR C Y T INYLSEPID++T+WID EA H A Sbjct: 1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLSCRVCSESYQTNINYLSEPIDVYTDWIDECEALHTA 83
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A024U4B4_9STRA (Transcription elongation factor 1 homolog n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4B4_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.900e-25 Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 0 Query: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHA 82 MGRRK+STKKI +K+ + FKCPFC HD VQC M+ NVG L CR C Y + INYLSEPID++T+WID EA H+ Sbjct: 1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLTCRICSESYQSNINYLSEPIDVYTDWIDECEALHS 82
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A8J2WXL7_9STRA (Transcription elongation factor 1 homolog n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXL7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 4.310e-24 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 0 Query: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAE 80 MGRR++ K+ KK+PT+ T FKCPFC ++K V M++ GTL+CR C Y+ INYLSEP+D+F+EWID EAE Sbjct: 1 MGRRRAKATKVVKKKQPTMQTEFKCPFCNYEKCVAAKMDYDKETGTLECRVCAATYTATINYLSEPVDVFSEWIDQCEAE 80
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: F0YA60_AURAN (Transcription elongation factor 1 homolog (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA60_AURAN) HSP 1 Score: 96.7 bits (239), Expect = 5.310e-24 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAE 78 MGRR++ +K+ KK+P + T FKCPFC H+ V+C ++++ G+L+CR C YS +NYLSEPIDIF+EWID E Sbjct: 1 MGRRRAKAQKVVKKKKPVMLTEFKCPFCNHEGAVECKIDYEKESGSLECRVCGASYSATVNYLSEPIDIFSEWIDHCE 78
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A2P6V099_9CHLO (Transcription elongation factor 1 homolog n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V099_9CHLO) HSP 1 Score: 96.7 bits (239), Expect = 6.100e-24 Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 0 Query: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAA 83 MG+RKSS K K+RP L+T+F CPFC DK V C M+ + NVG ++C +C +ST I+ LSEPID+++EWIDA EAE+A+ Sbjct: 1 MGKRKSSAKAPPKKQRPKLETTFACPFCNADKSVGCEMDREKNVGAVRCTQCKAAWSTKIHQLSEPIDVYSEWIDACEAENAS 83
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A2P6TL08_CHLSO (Transcription elongation factor 1 homolog n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TL08_CHLSO) HSP 1 Score: 92.4 bits (228), Expect = 2.850e-22 Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = 0 Query: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHAA 83 MG+RKSS K K RP L+T+F CPFC DK V C ++ + NVG ++C +C ++T I+ LSEPID+++EWIDA E E+A+ Sbjct: 1 MGKRKSSAKPPPKKARPKLETTFACPFCNADKSVSCELDRETNVGAVKCSQCKAAWTTKIHQLSEPIDVYSEWIDACEEENAS 83
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A0D2KVK8_9CHLO (Transcription elongation factor 1 homolog n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KVK8_9CHLO) HSP 1 Score: 92.0 bits (227), Expect = 3.940e-22 Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 0 Query: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHA 82 MG+RKSS K P LDTSF CPFC K VQCTM+++ GT++C C +S+ IN+LSEPIDI+++W+DA E+ +A Sbjct: 1 MGKRKSSAKPPPKAPAPKLDTSFNCPFCNSTKTVQCTMDWERQEGTVECVHCKESFSSKINHLSEPIDIYSDWLDACESANA 82
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Match: A0A7S2G0L4_9STRA (Transcription elongation factor 1 homolog (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0L4_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 7.950e-22 Identity = 41/81 (50.62%), Postives = 60/81 (74.07%), Query Frame = 0 Query: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEH 81 MGRRK++ KK+ KKRPT+ +FKC FC H+ V+C +N ++ +G L+CR C + T I+YLSE +D+F+EWID+ EAE+ Sbjct: 29 MGRRKTAMKKLK-KKRPTVAQTFKCLFCNHEDAVECELNHREKIGKLKCRICGADWETRIHYLSEAVDVFSEWIDSTEAEN 108 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352367 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|352367|estExt_Genemark1.C_Ctg_1160072 ID=Trimin1|352367|estExt_Genemark1.C_Ctg_1160072|Name=jgi.p|Trimin1|352367|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=120bpback to top |