mRNA_10562 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|149411
Unique NamemRNA_10562
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A835YKJ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKJ8_9STRA)

HSP 1 Score: 218 bits (554), Expect = 3.420e-70
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1 
Query:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPRRFVGGDVEEA 402
            MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPRRFVGGDVEEA
Sbjct:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPRRFVGGDVEEA 134
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BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S1VJ82_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VJ82_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.040e-19
Identity = 62/128 (48.44%), Postives = 77/128 (60.16%), Query Frame = 1 
Query:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQ---AAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPRR 375
            MDAE F SLP +MQQE++S         AQ    +G DP                 + R +  AA AA   PADPS+A EMDNASF+ SLAP+LR EILL ADE FL++L PN+ AEA++L+ERA  R
Sbjct: 1770 MDAEAFNSLPPDMQQEVVSQHQITEELTAQLDPTSGLDPSVLAELPEDMRRDAIAQDRREREEAARAAQ--PADPSNAAEMDNASFLVSLAPELREEILLTADENFLNSLPPNIRAEAQLLRERASVR 1895
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BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S4HZ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HZ14_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.050e-19
Identity = 61/132 (46.21%), Postives = 81/132 (61.36%), Query Frame = 1 
Query:    1 MDAEVFASLPREMQQEILSP---------SSAAPPAQAQA-AGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 366
            MD EVF SLP +MQ+E+++          S+AA   Q  + +  DP           XX  E E R +R       + PADPS+A+EMDNASFVASLAPDLR EILL AD+ FL +L P++ +EA++L+ERA
Sbjct:  193 MDLEVFNSLPPDMQREVIAEHESTTGGGGSTAASDVQLDSTSALDPEALAALPEEMRXXVIEQERRERRAREEERSEPPADPSNAEEMDNASFVASLAPDLREEILLTADDAFLGSLPPDMQSEAQILRERA 324
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BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: I2CQM8_NANGC (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQM8_NANGC)

HSP 1 Score: 85.9 bits (211), Expect = 2.740e-18
Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 1 
Query:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 366
            MD E FA LP E+Q+E+       P      +  DP                 EAR +R   + A   PA+P++A EMDNASF+ASL PDLR E+LLQ  ++ L++L PN+VAEA V++ERA
Sbjct:    1 MDPEAFACLPAEIQRELAQEHGTLP-TPLPGSSLDPEALSALPEALRNEVLAEEARERRQREATAARAPANPANATEMDNASFLASLPPDLREEVLLQVTDEVLASLPPNVVAEAHVVRERA 121
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BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S2FSG9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FSG9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 9.200e-18
Identity = 66/156 (42.31%), Postives = 81/156 (51.92%), Query Frame = 1 
Query:    1 MDAEVFASLPREMQQEIL------------------------------SPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDI----PADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 366
            MD EVFA LP  MQQE++                              +P S+   A+A ++G DP                 E   Q  A S +D I    PADPS A++MDNASF+ASLAP+LRA+ILLQAD  FL TL PNLVAEA++L ERA
Sbjct:  211 MDPEVFAELPAFMQQELVQQHLLETSFANDPRGSGGGSGRAQGSAGPGAPGSSDFAAEAASSGLDPEALAALPEDV-----RREVLAQHAAMSTSDGIGRHEPADPSRAEDMDNASFLASLAPELRADILLQADGAFLQTLPPNLVAEAQLLHERA 361
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BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S4S0Y2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S0Y2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.010e-17
Identity = 71/127 (55.91%), Postives = 88/127 (69.29%), Query Frame = 1 
Query:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQ-----AAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 366
            MD EVF SLP EMQQE++    A      Q     +     XXXXXXXXXXXXXXX  + RR R      +  PADP++A+EMDNASFVASLAPDLR EILL AD+ FL++L P+++AEA++L+ERA
Sbjct: 1598 MDLEVFNSLPLEMQQEVIEQHQATMNVATQLDSTSSXXXXXXXXXXXXXXXXXXXXXXQERRMR------EQTPADPANAEEMDNASFVASLAPDLREEILLAADDTFLNSLPPDIIAEAQILRERA 1718
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BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: W7TP10_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP10_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.100e-16
Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 1 
Query:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 366
            MD E FA LP E+Q+E+       P      +  DP                 EAR +R   + A   PA+P++A EMDNASF+ASL PDLR E+LLQ  ++ L++L PN+VAEA V++ERA
Sbjct:    1 MDPEAFACLPAEIQRELAQEHGTLP-TPLPGSSLDPEALSALPEALRNEVLAEEARERRRREATATRAPANPANATEMDNASFLASLPPDLREEVLLQVTDEVLASLPPNVVAEAHVVRERA 121
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BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A6H5L8R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.130e-16
Identity = 72/132 (54.55%), Postives = 91/132 (68.94%), Query Frame = 1 
Query:    1 MDAEVFASLPREMQQEIL-----SPSSAAPPAQA-QAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAAD-DIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPRR 375
            MD +VFA LP +MQQE++     +  S    A+  +AA    XXXXXXXXXXXXXX E EAR +R+  +  +   PADPS A EMDNASFVA+L P+LR E+LL AD+  LSTL P+LVAEA V++ER P +
Sbjct:  516 MDPDVFAQLPPDMQQEVVREHRSTVGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMREAPGNAGGPADPSRASEMDNASFVATLPPELRREVLLSADDALLSTLPPDLVAEAMVMRERIPHQ 647
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BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S2W4E8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W4E8_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.140e-16
Identity = 71/124 (57.26%), Postives = 85/124 (68.55%), Query Frame = 1 
Query:    1 MDAEVFASLPREMQQEILSPSSAA--PPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 366
            MD EVF SLP EMQQEI+          AQ  A+    XXXXXXXXXXXXXXX      +R      D  PADPS+A+EMDNASF+ SLAPDLR EILL A+E FL+TL  +++AEA++L+ERA
Sbjct:  679 MDLEVFNSLPHEMQQEIIQQHQETINVAAQLDASSXXXXXXXXXXXXXXXXXXXXXXXXERRLR---DQAPADPSNAEEMDNASFIVSLAPDLREEILLTAEESFLNTLPSDIIAEAQLLRERA 799
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BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S4D520_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D520_HETAK)

HSP 1 Score: 78.6 bits (192), Expect = 8.030e-16
Identity = 45/72 (62.50%), Postives = 54/72 (75.00%), Query Frame = 1 
Query:  157 AEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPR 372
            AE  RQR  A   ++ PADP+ AQEMDNASFVASL P LR E+LL AD +FL +L P+LVAEA +L+ERA R
Sbjct:   44 AERDRQRRRAEE-NEAPADPARAQEMDNASFVASLDPQLRREVLLTADAEFLRSLPPDLVAEANLLRERATR 114
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKJ8_9STRA3.420e-70100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1VJ82_9STRA1.040e-1948.44Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4HZ14_9STRA2.050e-1946.21Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
I2CQM8_NANGC2.740e-1842.62E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nan... [more]
A0A7S2FSG9_9STRA9.200e-1842.31Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4S0Y2_9STRA5.010e-1755.91Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
W7TP10_9STRA1.100e-1642.62Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A6H5L8R1_9PHAE2.130e-1654.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2W4E8_9STRA3.140e-1657.26Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4D520_HETAK8.030e-1662.50Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_74contigContig_74:436284..439583 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|149411|gw1.74.75.1
DescriptionHECT E3 ubiquitin ligase. Source PGD
COG categoryKO
Max annot lvl121069|Pythiales
EggNOG OGsCOG5021@1|root,KOG0939@2759|Eukaryota,1MB0C@121069|Pythiales
Evalue7.82e-18
Seed ortholog115417.EPrPW00000016605
Hectar predicted targeting categoryother localisation
TranscriptId149733
TrackFilteredModels1
ProteinId149411
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149411gene_10562Tribonema minus UTEX_B_3156 geneContig_74 436284..439583 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149411Trimin1|149411|gw1.74.75.1Tribonema minus UTEX_B_3156 polypeptideContig_74 436284..439583 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10562_3exon_10562_3Tribonema minus UTEX_B_3156 exonContig_74 436284..436372 -
exon_10562_2exon_10562_2Tribonema minus UTEX_B_3156 exonContig_74 438933..439269 -
exon_10562_1exon_10562_1Tribonema minus UTEX_B_3156 exonContig_74 439533..439583 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10562CDS_10562Tribonema minus UTEX_B_3156 CDSContig_74 439533..439583 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10562 ID=mRNA_10562|Name=jgi.p|Trimin1|149411|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=477bp|location=Sequence derived from alignment at Contig_74:436284..439583- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGATGCGGAGGTCTTCGCGTCGCTGCCACGTGAAATGCAGCAGGAAAT
CCTGTCCCCCTCCTCCGCTGCTCCCCCCGCGCAGGCGCAGGCGGCGGGCT
GGGATCCAGAGGCGCTAGCGGCGCTGCCGCCTGAGATGCGCGAGGAGATC
ATGGAGGCCGAGGCGCGGCGGCAGCGGCTGGCGGCGTCGGCGGCGGATGA
CATCCCCGCGGACCCCTCGCACGCGCAGGAGATGGACAATGCGAGCTTCG
TCGCGTCGCTCGCGCCCGACCTCCGCGCGGAGATCCTCCTGCAGGCGGAC
GAGCAGTTCCTGTCGACGCTGTCGCCGAACCTGGTGGCGGAGGCGCGCGT
GCTGCAAGAGCGCGCCCCGCGGCGCTTCGTCGGCGGCGACGTGGAGGAAG
CCGGTGGAGCCGCTGCCGGCGGCGGCAGCGGCGATGGCAGCAGTGCAGCT
GGCGGCGGCGGCGGCGCAGCAGGTGGC
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protein sequence of jgi.p|Trimin1|149411

>Trimin1|149411|gw1.74.75.1 ID=Trimin1|149411|gw1.74.75.1|Name=jgi.p|Trimin1|149411|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=159bp
MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPEALAALPPEMREEI
MEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQAD
EQFLSTLSPNLVAEARVLQERAPRRFVGGDVEEAGGAAAGGGSGDGSSAA
GGGGGAAGG
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mRNA from alignment at Contig_74:436284..439583-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10562 ID=mRNA_10562|Name=jgi.p|Trimin1|149411|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3300bp|location=Sequence derived from alignment at Contig_74:436284..439583- (Tribonema minus UTEX_B_3156 )
ATGGATGCGGAGGTCTTCGCGTCGCTGCCACGTGAAATGCAGCAGGAAAT
CGTCGACCAGCACAGGCAAACGCTTCAGGTGCGCACCGCAGAGGGCGGCA
GCGCGGCCATGCACGCAGCTGCGCTTTAGTTCACCACGGCTATGCCTCAG
TTGATGACAGGTCGGGCGTCGTGCTTGTCGAACCACACAGCTGCCGGTCG
AGACAGGGGGACTTGATTGCTTGAAATCCCTCCCTCAATGCTGAACATCT
ATTGCGCCCCTCTCACATAGCCAGTTTTCTGGTAGAAGGCCGTGTGCAGT
CATGCACCTCACAGCTGTCCCCCTCCTCCGCTGCTCCCCCCGCGCAGGCG
CAGGCGGCGGGCTGGGATCCAGAGGCGCTAGCGGCGCTGCCGCCTGAGAT
GCGCGAGGAGATCATGGAGGCCGAGGCGCGGCGGCAGCGGCTGGCGGCGT
CGGCGGCGGATGACATCCCCGCGGACCCCTCGCACGCGCAGGAGATGGAC
AATGCGAGCTTCGTCGCGTCGCTCGCGCCCGACCTCCGCGCGGAGATCCT
CCTGCAGGCGGACGAGCAGTTCCTGTCGACGCTGTCGCCGAACCTGGTGG
CGGAGGCGCGCGTGCTGCAAGAGCGCGCCCCGCGGCGCTTCGTCGGCGGC
GGTGGCGGGGGCGCTGCGCAGCAGGCAGAAGGGGGCGCCGCTGCGGCAGC
TGCTGCGGGCGCCGCCGCCGCCGCCGCTGCCGCGCCCGCCGATGACGCCT
TGCAGCGCGGCTTGACGCCTCCGCCTGTACGGCGCTCGCCGGAGCCGGCT
GCAGCTGCGGCAGGCGGCGGACGCAGCGGCACGGAGCCGCAGATGCGCCT
GGAGGCGGAGCGCGCGGCGACGGGCCTGCCGCCGACGGTGCTGCGCGCGG
CCGTCGGCGCGCTCGTGCGGATCATCCACCTGCGCCACCCCGTGCGCCCG
CACCGGCTGCTGCAGCGGCTGCTGCTCAACATGTGCGCGGCGGACCCGCG
CGCGCGCCTCGCCATCACGCACGCGCTCGTGGCGCTCGCCGCCAGCGACC
GGCGCCGCGTGCGCGCGGCGCTCCGCCAGTACCTGCCCGACGCCGAGCCG
GAACCGCCAGCGGCGGCGGCAGCAGCGGCAGCAGCAGCAGCGGCGGCGCC
AGCAGCAATGACGCCGCGGCATCGCAGGCCACAGGCGGGCGGCGCTCGCA
CGTCCAGCGCGCGGACGCCGTCGAGGACACCGTCACGGAGACTGCGCGTT
GCGGAGGGCGGGCGGGGACCTGGCGACTCAGAGCCGGAAAGCAGCGACGA
TGAGCTGCGACCAGGCGGTGGGGGCAGTGGCGGTGGTGGCGGTGGCGGAG
CGGGTGGTGCAGGCGCCGGCGGCGGCAGCGGCGGCGGCGTGGGCAGCAAT
GACGCCGGCCGTTTCGCTGTGGATGCAACGGAGGACGCTGAGGTGCGCAT
TCCAGAACGACCTGGTGTCGCGCAGAAGTACTCAGACCACAGAACTCTGA
AGCTGAGTGAACACTCATGACGGATGGTGCACCGCTCCGGTCGCCTTCGT
CACTCGAAGGAGCAACGGCGTGGTGATGTAACCACTAACAATCCTGGAAT
GCAAAAGCCATTCACCCACCTGCTGTCATTTGATGCCTCCCCCCCCGTCC
CCCCCCCCCCCCCTCCCTCCCCCCCGGTGAACCAGGAATTCCCTCCCGCG
GGCCTCATCAGCCCTGCTCAGGATGCGGCTGCGCAGCAGGCGGGCGGCAG
CGGCGCCGGCGACGACGCCGCGTTCGAGGTGGACCCGGAGGTAGCGCGGC
GCGTGCTCGACCTGCTGCTGTACCTGGCCAAGAGCAGCGCGCGTGTCGCG
TACAGCCTGCTCACGGAGGAGACGGACGCGGTGCGCATGGAGGTGGAGGC
GGCGCTGGCGGCGGCGGAGACTGCAGGTGCGCTGCACGAGTGCTGCGCTG
GCTGCTGTTGCGCTGAAACGCGTGCAGCGTGAAATACAAATGCTCTCCCA
TTGCGAGTGTACTTTCGCCCGTCGAGTGCTGCTGCCCGTCACCAGTCAGG
CCCGTGGTGGTTGAGCACCGCAACGCACGCTACATTTGACTGAGTCACAC
TCGTGTCCTGTTGTGTTAGCGCGTCCAGACTTGACTGCTTGCATGTGTGC
GCAGCTGTCTGCGTTCACGTCTGAATATGCGCATGGGCACTGCGGCCCCT
CAGTTCATCTGATTGCAGAGCATCTGCTACTATCTCCTGCCGGTTTTGCT
GACATGCGCTCCGTCCGCCGCGCCGCAGTCGCGGTCACGGACGTCGCGAG
CATGGATGTCGAAGGCGAAGACGCCGGCGCCGCCGACGCGCTGTCCGAGC
GCCGCAAGGGCGTGCTGCTGGAGCAGCTCCTTGCACTGCTGGGGCGCCCG
CTGTACACCATGAGCAGCGTCAACCTCGAGCAGCTGCTGCAGGTCCTCGA
GGTGCTGGTCAGCCCGCTCAAGGGCCTGCCGGAGGGCGGCGCGGCGGCGG
CGGCAGCGGCGGCGGCGGCGCCAGATGCTGCTGCTGCGGCAGAGGGCGCC
GCCGGTGACGCCGCCGCGGCCGCGCCGGCAGCGGAGGCGGCGTCGGCAGA
TGCGCCAGCCGCTGCGGACTCGCCAGACAGCATGGACGTGGACGAACCGG
CAGGCGATCCAGCAGCAGCAGCGCCGCCGGCGGCAGCAGCTGCAGACGCG
CCGGCGGAAGCGGATCCGCCCGCGGCGGTGCCGCGCAGCACGCACGAGTG
GGTCGCCATCCCCACGCCGGCCATCAGCCCGGAGCGGCTGCGGCAGCTGT
GCGCGGTGCTGCGCCTCGAGACGAGCAGCGACGCGTCGTTCGCGCGCATC
ACCAACGTGCTCGCGGCGCTCGCGCGCGTGCCCGCGAACCGCGCGCCGCT
GCTGCGCGAGCTGCAGCGCGTCGCCAAGCTGCTCGGGCTGAGCAGCGCCG
CGGGGCTCGAGGCGCTCGCCGCGCGGCTGCGCGCGCAGTCCGCGGGCGCG
CCCGCCGCCGCCGCCGCCGCGCTCACCGCGGGCTCCAGCGCGAGCGAGGC
CAAGCTGCTGCGCGTGCTGCAGACGCTCAGCGCGCTCGCCGGCAAAGACG
CGCTGCTGCTCGACGAGCTGCTCGGCTCGCTGGGCCTGGAGGCGCTGTGG
GACGCGCTGTCCAACTGCCTTACGGTCGCCTCGCAGCTGCACGGCGTGCC
GGAGGCGGAAGACGTGGAGGAAGCCGGTGGAGCCGCTGCCGGCGGCGGCA
GCGGCGATGGCAGCAGTGCAGCTGGCGGCGGCGGCGGCGCAGCAGGTGGC
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Coding sequence (CDS) from alignment at Contig_74:436284..439583-

>mRNA_10562 ID=mRNA_10562|Name=jgi.p|Trimin1|149411|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=477bp|location=Sequence derived from alignment at Contig_74:436284..439583- (Tribonema minus UTEX_B_3156 )
ATGGATGCGGAGGTCTTCGCGTCGCTGCCACGTGAAATGCAGCAGGAAAT
CCTGTCCCCCTCCTCCGCTGCTCCCCCCGCGCAGGCGCAGGCGGCGGGCT
GGGATCCAGAGGCGCTAGCGGCGCTGCCGCCTGAGATGCGCGAGGAGATC
ATGGAGGCCGAGGCGCGGCGGCAGCGGCTGGCGGCGTCGGCGGCGGATGA
CATCCCCGCGGACCCCTCGCACGCGCAGGAGATGGACAATGCGAGCTTCG
TCGCGTCGCTCGCGCCCGACCTCCGCGCGGAGATCCTCCTGCAGGCGGAC
GAGCAGTTCCTGTCGACGCTGTCGCCGAACCTGGTGGCGGAGGCGCGCGT
GCTGCAAGAGCGCGCCCCGCGGCGCTTCGTCGGCGGCGACGTGGAGGAAG
CCGGTGGAGCCGCTGCCGGCGGCGGCAGCGGCGATGGCAGCAGTGCAGCT
GGCGGCGGCGGCGGCGCAGCAGGTGGC
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