Trimin1|149411|gw1.74.75.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|149411
Unique NameTrimin1|149411|gw1.74.75.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length159
Homology
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A835YKJ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKJ8_9STRA)

HSP 1 Score: 218 bits (554), Expect = 3.420e-70
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPRRFVGGDVEEA 134
            MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPRRFVGGDVEEA
Sbjct:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPRRFVGGDVEEA 134          
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S1VJ82_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VJ82_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.040e-19
Identity = 62/128 (48.44%), Postives = 77/128 (60.16%), Query Frame = 0
Query:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQ---AAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPRR 125
            MDAE F SLP +MQQE++S         AQ    +G DP                 + R +  AA AA   PADPS+A EMDNASF+ SLAP+LR EILL ADE FL++L PN+ AEA++L+ERA  R
Sbjct: 1770 MDAEAFNSLPPDMQQEVVSQHQITEELTAQLDPTSGLDPSVLAELPEDMRRDAIAQDRREREEAARAAQ--PADPSNAAEMDNASFLVSLAPELREEILLTADENFLNSLPPNIRAEAQLLRERASVR 1895          
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S4HZ14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HZ14_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.050e-19
Identity = 61/132 (46.21%), Postives = 81/132 (61.36%), Query Frame = 0
Query:    1 MDAEVFASLPREMQQEILSP---------SSAAPPAQAQA-AGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 122
            MD EVF SLP +MQ+E+++          S+AA   Q  + +  DP           XX  E E R +R       + PADPS+A+EMDNASFVASLAPDLR EILL AD+ FL +L P++ +EA++L+ERA
Sbjct:  193 MDLEVFNSLPPDMQREVIAEHESTTGGGGSTAASDVQLDSTSALDPEALAALPEEMRXXVIEQERRERRAREEERSEPPADPSNAEEMDNASFVASLAPDLREEILLTADDAFLGSLPPDMQSEAQILRERA 324          
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: I2CQM8_NANGC (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQM8_NANGC)

HSP 1 Score: 85.9 bits (211), Expect = 2.740e-18
Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 0
Query:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 122
            MD E FA LP E+Q+E+       P      +  DP                 EAR +R   + A   PA+P++A EMDNASF+ASL PDLR E+LLQ  ++ L++L PN+VAEA V++ERA
Sbjct:    1 MDPEAFACLPAEIQRELAQEHGTLP-TPLPGSSLDPEALSALPEALRNEVLAEEARERRQREATAARAPANPANATEMDNASFLASLPPDLREEVLLQVTDEVLASLPPNVVAEAHVVRERA 121          
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S2FSG9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FSG9_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 9.200e-18
Identity = 66/156 (42.31%), Postives = 81/156 (51.92%), Query Frame = 0
Query:    1 MDAEVFASLPREMQQEIL------------------------------SPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDI----PADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 122
            MD EVFA LP  MQQE++                              +P S+   A+A ++G DP                 E   Q  A S +D I    PADPS A++MDNASF+ASLAP+LRA+ILLQAD  FL TL PNLVAEA++L ERA
Sbjct:  211 MDPEVFAELPAFMQQELVQQHLLETSFANDPRGSGGGSGRAQGSAGPGAPGSSDFAAEAASSGLDPEALAALPEDV-----RREVLAQHAAMSTSDGIGRHEPADPSRAEDMDNASFLASLAPELRADILLQADGAFLQTLPPNLVAEAQLLHERA 361          
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S4S0Y2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S0Y2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.010e-17
Identity = 71/127 (55.91%), Postives = 88/127 (69.29%), Query Frame = 0
Query:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQ-----AAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 122
            MD EVF SLP EMQQE++    A      Q     +     XXXXXXXXXXXXXXX  + RR R      +  PADP++A+EMDNASFVASLAPDLR EILL AD+ FL++L P+++AEA++L+ERA
Sbjct: 1598 MDLEVFNSLPLEMQQEVIEQHQATMNVATQLDSTSSXXXXXXXXXXXXXXXXXXXXXXQERRMR------EQTPADPANAEEMDNASFVASLAPDLREEILLAADDTFLNSLPPDIIAEAQILRERA 1718          
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: W7TP10_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TP10_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.100e-16
Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 0
Query:    1 MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 122
            MD E FA LP E+Q+E+       P      +  DP                 EAR +R   + A   PA+P++A EMDNASF+ASL PDLR E+LLQ  ++ L++L PN+VAEA V++ERA
Sbjct:    1 MDPEAFACLPAEIQRELAQEHGTLP-TPLPGSSLDPEALSALPEALRNEVLAEEARERRRREATATRAPANPANATEMDNASFLASLPPDLREEVLLQVTDEVLASLPPNVVAEAHVVRERA 121          
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A6H5L8R1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R1_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.130e-16
Identity = 72/132 (54.55%), Postives = 91/132 (68.94%), Query Frame = 0
Query:    1 MDAEVFASLPREMQQEIL-----SPSSAAPPAQA-QAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAAD-DIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPRR 125
            MD +VFA LP +MQQE++     +  S    A+  +AA    XXXXXXXXXXXXXX E EAR +R+  +  +   PADPS A EMDNASFVA+L P+LR E+LL AD+  LSTL P+LVAEA V++ER P +
Sbjct:  516 MDPDVFAQLPPDMQQEVVREHRSTVGSMEDQAELLEAAXXXXXXXXXXXXXXXXXXLEQEARNRRMREAPGNAGGPADPSRASEMDNASFVATLPPELRREVLLSADDALLSTLPPDLVAEAMVMRERIPHQ 647          
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S2W4E8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W4E8_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.140e-16
Identity = 71/124 (57.26%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    1 MDAEVFASLPREMQQEILSPSSAA--PPAQAQAAGWDPXXXXXXXXXXXXXXXEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERA 122
            MD EVF SLP EMQQEI+          AQ  A+    XXXXXXXXXXXXXXX      +R      D  PADPS+A+EMDNASF+ SLAPDLR EILL A+E FL+TL  +++AEA++L+ERA
Sbjct:  679 MDLEVFNSLPHEMQQEIIQQHQETINVAAQLDASSXXXXXXXXXXXXXXXXXXXXXXXXERRLR---DQAPADPSNAEEMDNASFIVSLAPDLREEILLTAEESFLNTLPSDIIAEAQLLRERA 799          
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Match: A0A7S4D520_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D520_HETAK)

HSP 1 Score: 78.6 bits (192), Expect = 8.030e-16
Identity = 45/72 (62.50%), Postives = 54/72 (75.00%), Query Frame = 0
Query:   53 AEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQADEQFLSTLSPNLVAEARVLQERAPR 124
            AE  RQR  A   ++ PADP+ AQEMDNASFVASL P LR E+LL AD +FL +L P+LVAEA +L+ERA R
Sbjct:   44 AERDRQRRRAEE-NEAPADPARAQEMDNASFVASLDPQLRREVLLTADAEFLRSLPPDLVAEANLLRERATR 114          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|149411 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKJ8_9STRA3.420e-70100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1VJ82_9STRA1.040e-1948.44Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S4HZ14_9STRA2.050e-1946.21Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
I2CQM8_NANGC2.740e-1842.62E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Nan... [more]
A0A7S2FSG9_9STRA9.200e-1842.31Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4S0Y2_9STRA5.010e-1755.91Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
W7TP10_9STRA1.100e-1642.62Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A6H5L8R1_9PHAE2.130e-1654.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2W4E8_9STRA3.140e-1657.26Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4D520_HETAK8.030e-1662.50Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025527HUWE1/Rev1, ubiquitin binding regionPFAMPF14377UBMcoord: 1..18
e-value: 4.3E-4
score: 19.6
coord: 72..104
e-value: 7.2E-9
score: 34.8
coord: 35..58
e-value: 1.5E-4
score: 21.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availablePANTHERPTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEcoord: 3..126
NoneNo IPR availablePANTHERPTHR11254:SF398E3 UBIQUITIN-PROTEIN LIGASE UPL2-LIKE ISOFORM X1coord: 3..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_74contigContig_74:436284..439583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|149411mRNA_10562Tribonema minus UTEX_B_3156 mRNAContig_74 436284..439583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|149411|gw1.74.75.1 ID=Trimin1|149411|gw1.74.75.1|Name=jgi.p|Trimin1|149411|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=159bp
MDAEVFASLPREMQQEILSPSSAAPPAQAQAAGWDPEALAALPPEMREEI
MEAEARRQRLAASAADDIPADPSHAQEMDNASFVASLAPDLRAEILLQAD
EQFLSTLSPNLVAEARVLQERAPRRFVGGDVEEAGGAAAGGGSGDGSSAA
GGGGGAAGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025527HUWE1/Rev1_UBM