mRNA_10484 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|71766
Unique NamemRNA_10484
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A836CB89_9STRA (cwf21 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB89_9STRA)

HSP 1 Score: 617 bits (1590), Expect = 7.470e-217
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 1 
Query:   91 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKARQEARAKXXXXXXXXXXXXXXXXXXXXXXXXXPPAKEQPRESEAGELVEEDDRYQGASTRDDKSDGEGAHKGAASYDDMFSRGEYEVLKGEESKEXXXXXXXXXXXXXXXSRHDGRSGRVADDRGNGKAAPXXXXXXXXXHRRGEAESDVREEREGRRAPEXXXXXXXXXXXXERGDSRERVAAVAKVDRGTAAKLAGPAEKTRKSKQELPLKKAKLSKHEKQESKRRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATPPRKKHRSSK 1506
            MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKARQEARAKXXXXXXXXXXXXXXXXXXXXXXXXXPPAKEQPRESEAGELVEEDDRYQGASTRDDKSDGEGAHKGAASYDDMFSRGEYEVLKGEESKEXXXXXXXXXXXXXXXSRHDGRSGRVADDRGNGKAAPXXXXXXXXXHRRGEAESDVREEREGRRAPEXXXXXXXXXXXXERGDSRERVAAVAKVDRGTAAKLAGPAEKTRKSKQELPLKKAKLSKHEKQESKRRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATPPRKKHRSSK
Sbjct:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKARQEARAKXXXXXXXXXXXXXXXXXXXXXXXXXPPAKEQPRESEAGELVEEDDRYQGASTRDDKSDGEGAHKGAASYDDMFSRGEYEVLKGEESKEXXXXXXXXXXXXXXXSRHDGRSGRVADDRGNGKAAPXXXXXXXXXHRRGEAESDVREEREGRRAPEXXXXXXXXXXXXERGDSRERVAAVAKVDRGTAAKLAGPAEKTRKSKQELPLKKAKLSKHEKQESKRRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATPPRKKHRSSK 472
[Close]
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A6H5KXT9_9PHAE (cwf21 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT9_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 6.150e-38
Identity = 96/173 (55.49%), Postives = 116/173 (67.05%), Query Frame = 1 
Query:   91 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQA--WAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPE--KGSG---------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKK 570
            MYN +G+ TPRGSGTSGHVMSNRSHV+A   R  + RN    G  QA  W  P    +KAN+ELL+H R+RKVEAKIFELQEAMA+RGYSDA+IE KVAEVR+ L+ R        LP+  KG+G         +H+    KA +N RMR+AFGLG DY  GE+FD E Q +K
Sbjct:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNT---GKLQARDWEEP--PPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLPKGKKGTGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 168
[Close]
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: D7G1H6_ECTSI (cwf21 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H6_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 3.890e-36
Identity = 93/174 (53.45%), Postives = 112/174 (64.37%), Query Frame = 1 
Query:   91 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQA--WAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSG------------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKK 570
            MYN +G+ TPRGSGTSGHVMSNRSHV+A   R  + RN    G  QA  W  P    +KAN+ELL+H R+RKVEAKIFELQEAMA+RGYSDA+IE KVAEVR+ L+ R        L +   G            +H+    KA +N RMR+AFGLG DY  GE+FD E Q +K
Sbjct:   32 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNT---GKLQARDWEEP--PPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGXXXXXXXAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 200
[Close]
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A7S4B554_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B554_CHRCT)

HSP 1 Score: 115 bits (289), Expect = 4.220e-26
Identity = 77/184 (41.85%), Postives = 113/184 (61.41%), Query Frame = 1 
Query:   91 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSG-------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKARQE 621
            MYNGIGL T RGSGT+G+V  N S V   R +++    +TV  +D A     GA +KAN ++++H R+R+VE K+ +LQEA+ E+G ++ADIE +VAE+RR+L        +P  P K S        TH + A K QEN  ++DA G+   Y  G +FD ELQ KK+ +R A++ A +  ++E
Sbjct:    1 MYNGIGLATVRGSGTNGYVTRNLSFVTKTREKQQ----KTVFRADFAG---DGAPRKANTDIIQHNRKREVELKVAQLQEALEEQGLNEADIEKRVAEMRRKL-----LDKLPKEPTKSSSDVKRTGETHADAAAKEQENYALKDALGISSAYVGGSAFDRELQEKKRQERLAEKAAEEAEKEE 172
[Close]
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A7S4B540_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B540_CHRCT)

HSP 1 Score: 115 bits (289), Expect = 1.260e-25
Identity = 77/184 (41.85%), Postives = 113/184 (61.41%), Query Frame = 1 
Query:   91 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSG-------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKARQE 621
            MYNGIGL T RGSGT+G+V  N S V   R +++    +TV  +D A     GA +KAN ++++H R+R+VE K+ +LQEA+ E+G ++ADIE +VAE+RR+L        +P  P K S        TH + A K QEN  ++DA G+   Y  G +FD ELQ KK+ +R A++ A +  ++E
Sbjct:    1 MYNGIGLATVRGSGTNGYVTRNLSFVTKTREKQQ----KTVFRADFAG---DGAPRKANTDIIQHNRKREVELKVAQLQEALEEQGLNEADIEKRVAEMRRKL-----LDKLPKEPTKSSSDVKRTGETHADAAAKEQENYALKDALGISSAYVGGSAFDRELQEKKRQERLAEKAAEEAEKEE 172
[Close]
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A0D0ECU9_9AGAM (cwf21 domain-containing protein (Fragment) n=1 Tax=Paxillus rubicundulus Ve08.2h10 TaxID=930991 RepID=A0A0D0ECU9_9AGAM)

HSP 1 Score: 111 bits (278), Expect = 6.920e-25
Identity = 71/172 (41.28%), Postives = 98/172 (56.98%), Query Frame = 1 
Query:   91 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAAD 606
            MYNGIGLTTPRGSGT+G+V  N S ++          ++T      AW       ++ ++ +LEH R+RKVE K  ELQ  + + G ++ADIEAKV E+R +L    +         + S TH   A K  E ++M  A G  +DYTEGE+FD E Q +KK+ R A+RE  D
Sbjct:    1 MYNGIGLTTPRGSGTNGYVQRNLSVLRV---------HETATERAAAWDIAPPKHREPDEAILEHERKRKVEVKCLELQLKLEDDGLNEADIEAKVEELRTKLTADLASFSTSAKSLRPSDTHAIAAAKRAELDKMARALGTRRDYTEGEAFDREKQEEKKMHRVAEREERD 163
[Close]
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A8K1CKR8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKR8_PYTOL)

HSP 1 Score: 117 bits (293), Expect = 1.100e-24
Identity = 71/172 (41.28%), Postives = 104/172 (60.47%), Query Frame = 1 
Query:   91 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVR----RELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADR 594
            MYNGIGL T RGSGT+G+V  N S+V  +R R+ + RNQ   G   AW  P  +   AN ++L H ++R++E K+ EL   M ERG  + +I+ KV   R    ++L+  T++    G P+    TH     K +EN RM++AFG+ +D+  GESFD E+QAK++ +R A R
Sbjct:    1 MYNGIGLRTVRGSGTNGYVQRNLSYVNPNRTRQTLSRNQQTHGRG-AWDAPSKSKPTANPDILLHEQKRQIEVKLMELSMEMEERGCDEDEIQDKVQREREKLVKQLESATAKASRSGRPD--DSTHARAQRKEEENRRMKEAFGIAEDHVPGESFDPEMQAKRREERIARR 169
[Close]
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A6S9RVA4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9RVA4_CHRCT)

HSP 1 Score: 110 bits (274), Expect = 1.250e-24
Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = 1 
Query:   91 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSG-------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKK 573
            MYNGIGL T RGSGT+G+V  N S V   R +++    +TV  +D A     GA +KAN ++++H R+R+VE K+ +LQEA+ E+G ++ADIE +VAE+RR+L        +P  P K S        TH + A K QEN  ++DA G+   Y  G +FD ELQ KK+
Sbjct:    1 MYNGIGLATVRGSGTNGYVTRNLSFVTKTREKQQ----KTVFRADFAG---DGAPRKANTDIIQHNRKREVELKVAQLQEALEEQGLNEADIEKRVAEMRRKL-----LDKLPKEPTKSSSDVKRTGETHADAAAKEQENYALKDALGISSAYVGGSAFDRELQEKKR 156
[Close]
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: L1IZE8_GUITC (cwf21 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IZE8_GUITC)

HSP 1 Score: 108 bits (269), Expect = 3.280e-23
Identity = 68/169 (40.24%), Postives = 107/169 (63.31%), Query Frame = 1 
Query:   91 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADRE 597
            MYNG+GL+T RGS T+G+V  N +HV+    + R+   + +   ++  A P  A K+ + E+LEH R+R+ E KI E + A+ ++G S+  IE +VAEVRR+L+  +   ++    +K + +H     KA+E +R   AFG+ +D+TEGE+FD ELQ +KK +R A RE
Sbjct:    1 MYNGVGLSTVRGSATNGYVQRNLAHVQG---KTRVDYQKEL---EKGMAKPSLASKEPSWEILEHQRKRQTEVKIMEFRIALEDKGVSEDVIEERVAEVRRKLESESMHANLDTGAKKLTDSHALAQAKAREAQRFASAFGIRRDHTEGEAFDRELQEQKKAERQAARE 163
[Close]
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A2K1KTW1_PHYPA (cwf21 domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KTW1_PHYPA)

HSP 1 Score: 111 bits (278), Expect = 4.010e-23
Identity = 71/180 (39.44%), Postives = 110/180 (61.11%), Query Frame = 1 
Query:   91 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQ--DVP-GLPEKGSGTHVEH--AHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKAR 615
            MYNGIGL+TPRGSGT+G++ +N+  VK+  +R  +   Q   G+        G L+KAN ++LEH R+R++E K+ EL++ + ++GY D ++  +V  +R+ L+   ++   D P G   K + T   H  A K ++ E MRDA GL K+  EGE+FD +LQ +KK +R   RE  D+ R
Sbjct:    1 MYNGIGLSTPRGSGTNGYIQTNKFFVKSRPVRSEVKEFQNGQGAG-------GVLRKANKDILEHDRKRRIELKLMELEDQLVDQGYPDEEVLERVEALRKRLEAADAEDGDDAPAGADSKVNSTQSHHIAAQKEKQLETMRDALGL-KEVKEGEAFDRDLQEQKKQERIMAREEKDRER 172
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CB89_9STRA7.470e-217100.00cwf21 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5KXT9_9PHAE6.150e-3855.49cwf21 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G1H6_ECTSI3.890e-3653.45cwf21 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S4B554_CHRCT4.220e-2641.85Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4B540_CHRCT1.260e-2541.85Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0D0ECU9_9AGAM6.920e-2541.28cwf21 domain-containing protein (Fragment) n=1 Tax... [more]
A0A8K1CKR8_PYTOL1.100e-2441.28Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6S9RVA4_CHRCT1.250e-2443.45Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
L1IZE8_GUITC3.280e-2340.24cwf21 domain-containing protein n=1 Tax=Guillardia... [more]
A0A2K1KTW1_PHYPA4.010e-2339.44cwf21 domain-containing protein n=2 Tax=Physcomitr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_49contigContig_49:717090..719310 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|71766|CE71765_151
BRITEko00000,ko03041,ko04131
KEGG koko:K06110,ko:K13172
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0005737,GO:0005829,GO:0006139,GO:0006325,GO:0006355,GO:0006396,GO:0006397,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008380,GO:0008469,GO:0008757,GO:0009889,GO:0009909,GO:0009987,GO:0010219,GO:0010220,GO:0010467,GO:0010468,GO:0010556,GO:0016043,GO:0016070,GO:0016071,GO:0016273,GO:0016274,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018193,GO:0018195,GO:0018216,GO:0019219,GO:0019222,GO:0019538,GO:0019918,GO:0031323,GO:0031326,GO:0032259,GO:0032991,GO:0034641,GO:0034969,GO:0035246,GO:0035247,GO:0036211,GO:0042054,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043985,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0048518,GO:0048580,GO:0048583,GO:0048584,GO:0048831,GO:0050789,GO:0050793,GO:0050794,GO:0051171,GO:0051239,GO:0051252,GO:0051276,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1903506,GO:1990904,GO:2000026,GO:2000112,GO:2000241,GO:2001141
DescriptionRNA splicing
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1869@1|root,KOG1869@2759|Eukaryota
Evalue3.58e-37
Seed ortholog2880.D7G1H6
Hectar predicted targeting categoryother localisation
TranscriptId72088
TrackFilteredModels1
ProteinId71766
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|71766gene_10484Tribonema minus UTEX_B_3156 geneContig_49 717090..719310 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|71766Trimin1|71766|CE71765_151Tribonema minus UTEX_B_3156 polypeptideContig_49 717180..719240 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10484_1exon_10484_1Tribonema minus UTEX_B_3156 exonContig_49 717090..717335 +
exon_10484_2exon_10484_2Tribonema minus UTEX_B_3156 exonContig_49 717463..717591 +
exon_10484_3exon_10484_3Tribonema minus UTEX_B_3156 exonContig_49 717824..718029 +
exon_10484_4exon_10484_4Tribonema minus UTEX_B_3156 exonContig_49 718313..719310 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_10484UTR5_10484Tribonema minus UTEX_B_3156 five_prime_UTRContig_49 717090..717179 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10484CDS_10484Tribonema minus UTEX_B_3156 CDSContig_49 717180..717335 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_10484UTR3_10484Tribonema minus UTEX_B_3156 three_prime_UTRContig_49 719241..719310 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10484 ID=mRNA_10484|Name=jgi.p|Trimin1|71766|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1579bp|location=Sequence derived from alignment at Contig_49:717090..719310+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTGAACTCAGCAAACTCTCTAGGCGACACCAGCTGCCAAGCAGTGCATAT
CTTTGTGTAAAGCGGTCCCTTGATACCCCGCTGCTGCACAATGTACAATG
GCATAGGACTCACGACCCCAAGGGGTTCCGGCACCAGTGGCCATGTGATG
TCCAACCGGAGTCATGTCAAGGCGGACAGGATGCGAGAGCGGATGGGTCG
CAATCAGACAGTGGGAGGATCGGATCAAGCCTGGGCGCACCCACAGGGCG
CACTGAAGAAAGCCAACGACGAGCTGCTGGAGCACGCGCGAAGGCGCAAG
GTGGAGGCAAAGATTTTCGAGCTGCAGGAGGCCATGGCGGAGAGAGGGTA
CAGCGATGCAGACATTGAGGCAAAGGTGGCGGAAGTTCGACGTGAACTTG
ATGTCCGCACCAGCCAACAAGATGTGCCTGGACTCCCAGAGAAGGGCAGC
GGCACTCATGTGGAGCACGCACACAAGGCGCAGGAGAACGAGCGCATGAG
AGATGCATTCGGCCTGGGCAAGGACTATACGGAAGGCGAATCATTTGACC
ACGAGCTTCAGGCCAAGAAGAAACTACAAAGGGCTGCTGATCGCGAGGCT
GCCGACAAAGCGCGGCAAGAGGCACGAGCAAAGCGTGAGAAGGAGACACG
GCAGCGCGAAAAGGAGACACGCAAACGCGCCAAGGAGGAGGCACAGAAAG
CAAAGGAACCACCTGCAAAGGAGCAACCTCGTGAGTCGGAGGCGGGGGAG
CTGGTTGAGGAGGATGACAGGTATCAGGGCGCGTCCACCAGGGATGATAA
GTCAGATGGCGAGGGTGCGCACAAAGGTGCAGCATCCTACGATGACATGT
TCTCGCGGGGGGAATACGAGGTCTTGAAGGGCGAGGAGAGCAAGGAGGAG
GAGCAGGAGGAGGAGGAGGAGCCAGAGCGCACCCACAAGCATAGCAGGCA
CGATGGGAGAAGCGGGCGCGTAGCAGATGACCGTGGGAATGGCAAGGCAG
CACCAGAGCGCCACGATGGCCGCCATGCCAAGCATCGCCGAGGGGAGGCG
GAGAGTGACGTCAGGGAGGAAAGGGAAGGGCGCCGGGCACCGGAAGAGGT
ACGGGGGCGCAGTGGGCGGCGGGAGCCCAAAGAGCGCGGGGATAGCAGAG
AGAGGGTGGCAGCAGTTGCCAAGGTGGACCGGGGCACAGCTGCGAAGCTG
GCCGGTCCTGCTGAGAAGACACGTAAGTCAAAACAAGAGCTCCCGCTCAA
AAAGGCGAAGCTTTCAAAGCATGAGAAGCAGGAGTCAAAGCGGCGGCCCA
AGCCCTCACGCAGCAGCAGCAGCAGCAGCAGTGATTTTGAAAGCGGATCT
GAGAGTGACAGCTCCAGCTCATCCAGCTCAAGCTCATCGTCAGGTTCAAG
CTCCAGCTCTGGCTCGTCCTCTGGAAGCAGCAGCAGCAGCAGCTCCAGCA
GCAGCAGCAGCAGCAGAAGTGCGACTCCACCGCGCAAGAAGCATAGGAGT
TCTAAGTAACTACAGTAGTGCCAGTGCTGGGCACGGTCCATGCAACAAGA
CACAAACGAAGTGACAGGATTGGACGGCA
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protein sequence of jgi.p|Trimin1|71766

>Trimin1|71766|CE71765_151 ID=Trimin1|71766|CE71765_151|Name=jgi.p|Trimin1|71766|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=473bp
MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAH
PQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVR
RELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGE
SFDHELQAKKKLQRAADREAADKARQEARAKREKETRQREKETRKRAKEE
AQKAKEPPAKEQPRESEAGELVEEDDRYQGASTRDDKSDGEGAHKGAASY
DDMFSRGEYEVLKGEESKEEEQEEEEEPERTHKHSRHDGRSGRVADDRGN
GKAAPERHDGRHAKHRRGEAESDVREEREGRRAPEEVRGRSGRREPKERG
DSRERVAAVAKVDRGTAAKLAGPAEKTRKSKQELPLKKAKLSKHEKQESK
RRPKPSRSSSSSSSDFESGSESDSSSSSSSSSSSGSSSSSGSSSGSSSSS
SSSSSSSSRSATPPRKKHRSSK*
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mRNA from alignment at Contig_49:717090..719310+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10484 ID=mRNA_10484|Name=jgi.p|Trimin1|71766|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2221bp|location=Sequence derived from alignment at Contig_49:717090..719310+ (Tribonema minus UTEX_B_3156 )
CTGAACTCAGCAAACTCTCTAGGCGACACCAGCTGCCAAGCAGTGCATAT
CTTTGTGTAAAGCGGTCCCTTGATACCCCGCTGCTGCACAATGTACAATG
GCATAGGACTCACGACCCCAAGGGGTTCCGGCACCAGTGGCCATGTGATG
TCCAACCGGAGTCATGTCAAGGCGGACAGGATGCGAGAGCGGATGGGTCG
CAATCAGACAGTGGGAGGATCGGATCAAGCCTGGGCGCACCCACAGGTAT
GTGCAACTGCCAGCTGCTGCTAAATTGGTTCATTCCGGCATGGCCGTTGT
TGTTTTTGGTTTTGGATACTTTTGTGGCTTCAGTACTGACTCTTGAATGG
CGTTTTTCCGTTGTTGTGCTCAGGGCGCACTGAAGAAAGCCAACGACGAG
CTGCTGGAGCACGCGCGAAGGCGCAAGGTGGAGGCAAAGATTTTCGAGCT
GCAGGAGGCCATGGCGGAGAGAGGGTACAGCGATGCAGACATTGAGGCAA
AGGTAACATCGCCAATCCCTGATGTAGCTGTGGTTGATTATCAATTGCCT
TCTTGGTCATTGTTGAATTATTTCTGAACAATTGCTTGTTAAATCTGCTG
CCATGCATCTACGTTGTGCTGCTGCTGCATGCTAGCCTTGCCTGAACTCA
GGTGATGCATCTCACCAGAGTGTTTTTTCACACGCACGAGTGACACTCAT
GTTCTCACCTCCTTCTCCTCCCTAAACTTGACAGGTGGCGGAAGTTCGAC
GTGAACTTGATGTCCGCACCAGCCAACAAGATGTGCCTGGACTCCCAGAG
AAGGGCAGCGGCACTCATGTGGAGCACGCACACAAGGCGCAGGAGAACGA
GCGCATGAGAGATGCATTCGGCCTGGGCAAGGACTATACGGAAGGCGAAT
CATTTGACCACGAGCTTCAGGCCAAGAAGAAACTACAAAGGTGAGATGCT
TACCAGATATTCTAGTGCTTGTGCATGCTGTTGCAAACTTCGGCGCAAGC
TGTGTAATTTGTTTGCTTCACGAGGGTGGTGGCGTAATGGTTTACTTTTT
GATGCAGTCATCAGAGCCTGGACGCCCTATTCGTGTGCTGCTTGTCATGC
ACATTTGCCCCTGGACTGCTTTTGTCTGCCATGGCATTACATACACTCTT
GTGCACGACACACCAACTAACTGGAGCACGTGTACTGATGATCACGCTGC
CTGCGGACATTGCGTGTACACAGGGCTGCTGATCGCGAGGCTGCCGACAA
AGCGCGGCAAGAGGCACGAGCAAAGCGTGAGAAGGAGACACGGCAGCGCG
AAAAGGAGACACGCAAACGCGCCAAGGAGGAGGCACAGAAAGCAAAGGAA
CCACCTGCAAAGGAGCAACCTCGTGAGTCGGAGGCGGGGGAGCTGGTTGA
GGAGGATGACAGGTATCAGGGCGCGTCCACCAGGGATGATAAGTCAGATG
GCGAGGGTGCGCACAAAGGTGCAGCATCCTACGATGACATGTTCTCGCGG
GGGGAATACGAGGTCTTGAAGGGCGAGGAGAGCAAGGAGGAGGAGCAGGA
GGAGGAGGAGGAGCCAGAGCGCACCCACAAGCATAGCAGGCACGATGGGA
GAAGCGGGCGCGTAGCAGATGACCGTGGGAATGGCAAGGCAGCACCAGAG
CGCCACGATGGCCGCCATGCCAAGCATCGCCGAGGGGAGGCGGAGAGTGA
CGTCAGGGAGGAAAGGGAAGGGCGCCGGGCACCGGAAGAGGTACGGGGGC
GCAGTGGGCGGCGGGAGCCCAAAGAGCGCGGGGATAGCAGAGAGAGGGTG
GCAGCAGTTGCCAAGGTGGACCGGGGCACAGCTGCGAAGCTGGCCGGTCC
TGCTGAGAAGACACGTAAGTCAAAACAAGAGCTCCCGCTCAAAAAGGCGA
AGCTTTCAAAGCATGAGAAGCAGGAGTCAAAGCGGCGGCCCAAGCCCTCA
CGCAGCAGCAGCAGCAGCAGCAGTGATTTTGAAAGCGGATCTGAGAGTGA
CAGCTCCAGCTCATCCAGCTCAAGCTCATCGTCAGGTTCAAGCTCCAGCT
CTGGCTCGTCCTCTGGAAGCAGCAGCAGCAGCAGCTCCAGCAGCAGCAGC
AGCAGCAGAAGTGCGACTCCACCGCGCAAGAAGCATAGGAGTTCTAAGTA
ACTACAGTAGTGCCAGTGCTGGGCACGGTCCATGCAACAAGACACAAACG
AAGTGACAGGATTGGACGGCA
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Coding sequence (CDS) from alignment at Contig_49:717090..719310+

>mRNA_10484 ID=mRNA_10484|Name=jgi.p|Trimin1|71766|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1419bp|location=Sequence derived from alignment at Contig_49:717090..719310+ (Tribonema minus UTEX_B_3156 )
ATGTACAATGGCATAGGACTCACGACCCCAAGGGGTTCCGGCACCAGTGG
CCATGTGATGTCCAACCGGAGTCATGTCAAGGCGGACAGGATGCGAGAGC
GGATGGGTCGCAATCAGACAGTGGGAGGATCGGATCAAGCCTGGGCGCAC
CCACAGGGCGCACTGAAGAAAGCCAACGACGAGCTGCTGGAGCACGCGCG
AAGGCGCAAGGTGGAGGCAAAGATTTTCGAGCTGCAGGAGGCCATGGCGG
AGAGAGGGTACAGCGATGCAGACATTGAGGCAAAGGTGGCGGAAGTTCGA
CGTGAACTTGATGTCCGCACCAGCCAACAAGATGTGCCTGGACTCCCAGA
GAAGGGCAGCGGCACTCATGTGGAGCACGCACACAAGGCGCAGGAGAACG
AGCGCATGAGAGATGCATTCGGCCTGGGCAAGGACTATACGGAAGGCGAA
TCATTTGACCACGAGCTTCAGGCCAAGAAGAAACTACAAAGGGCTGCTGA
TCGCGAGGCTGCCGACAAAGCGCGGCAAGAGGCACGAGCAAAGCGTGAGA
AGGAGACACGGCAGCGCGAAAAGGAGACACGCAAACGCGCCAAGGAGGAG
GCACAGAAAGCAAAGGAACCACCTGCAAAGGAGCAACCTCGTGAGTCGGA
GGCGGGGGAGCTGGTTGAGGAGGATGACAGGTATCAGGGCGCGTCCACCA
GGGATGATAAGTCAGATGGCGAGGGTGCGCACAAAGGTGCAGCATCCTAC
GATGACATGTTCTCGCGGGGGGAATACGAGGTCTTGAAGGGCGAGGAGAG
CAAGGAGGAGGAGCAGGAGGAGGAGGAGGAGCCAGAGCGCACCCACAAGC
ATAGCAGGCACGATGGGAGAAGCGGGCGCGTAGCAGATGACCGTGGGAAT
GGCAAGGCAGCACCAGAGCGCCACGATGGCCGCCATGCCAAGCATCGCCG
AGGGGAGGCGGAGAGTGACGTCAGGGAGGAAAGGGAAGGGCGCCGGGCAC
CGGAAGAGGTACGGGGGCGCAGTGGGCGGCGGGAGCCCAAAGAGCGCGGG
GATAGCAGAGAGAGGGTGGCAGCAGTTGCCAAGGTGGACCGGGGCACAGC
TGCGAAGCTGGCCGGTCCTGCTGAGAAGACACGTAAGTCAAAACAAGAGC
TCCCGCTCAAAAAGGCGAAGCTTTCAAAGCATGAGAAGCAGGAGTCAAAG
CGGCGGCCCAAGCCCTCACGCAGCAGCAGCAGCAGCAGCAGTGATTTTGA
AAGCGGATCTGAGAGTGACAGCTCCAGCTCATCCAGCTCAAGCTCATCGT
CAGGTTCAAGCTCCAGCTCTGGCTCGTCCTCTGGAAGCAGCAGCAGCAGC
AGCTCCAGCAGCAGCAGCAGCAGCAGAAGTGCGACTCCACCGCGCAAGAA
GCATAGGAGTTCTAAGTAA
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