Trimin1|71766|CE71765_151 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|71766
Unique NameTrimin1|71766|CE71765_151
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length473
Homology
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A836CB89_9STRA (cwf21 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB89_9STRA)

HSP 1 Score: 615 bits (1585), Expect = 5.820e-217
Identity = 472/472 (100.00%), Postives = 472/472 (100.00%), Query Frame = 0
Query:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKARQEARAKXXXXXXXXXXXXXXXXXXXXXXXXXPPAKEQPRESEAGELVEEDDRYQGASTRDDKSDGEGAHKGAASYDDMFSRGEYEVLKGEESKEXXXXXXXXXXXXXXXSRHDGRSGRVADDRGNGKAAPXXXXXXXXXHRRGEAESDVREEREGRRAPEXXXXXXXXXXXXERGDSRERVAAVAKVDRGTAAKLAGPAEKTRKSKQELPLKKAKLSKHEKQESKRRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATPPRKKHRSSK 472
            MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKARQEARAKXXXXXXXXXXXXXXXXXXXXXXXXXPPAKEQPRESEAGELVEEDDRYQGASTRDDKSDGEGAHKGAASYDDMFSRGEYEVLKGEESKEXXXXXXXXXXXXXXXSRHDGRSGRVADDRGNGKAAPXXXXXXXXXHRRGEAESDVREEREGRRAPEXXXXXXXXXXXXERGDSRERVAAVAKVDRGTAAKLAGPAEKTRKSKQELPLKKAKLSKHEKQESKRRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATPPRKKHRSSK
Sbjct:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKARQEARAKXXXXXXXXXXXXXXXXXXXXXXXXXPPAKEQPRESEAGELVEEDDRYQGASTRDDKSDGEGAHKGAASYDDMFSRGEYEVLKGEESKEXXXXXXXXXXXXXXXSRHDGRSGRVADDRGNGKAAPXXXXXXXXXHRRGEAESDVREEREGRRAPEXXXXXXXXXXXXERGDSRERVAAVAKVDRGTAAKLAGPAEKTRKSKQELPLKKAKLSKHEKQESKRRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATPPRKKHRSSK 472          
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A6H5KXT9_9PHAE (cwf21 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT9_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 3.260e-38
Identity = 96/173 (55.49%), Postives = 116/173 (67.05%), Query Frame = 0
Query:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQA--WAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPE--KGSG---------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKK 160
            MYN +G+ TPRGSGTSGHVMSNRSHV+A   R  + RN    G  QA  W  P    +KAN+ELL+H R+RKVEAKIFELQEAMA+RGYSDA+IE KVAEVR+ L+ R        LP+  KG+G         +H+    KA +N RMR+AFGLG DY  GE+FD E Q +K
Sbjct:    1 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNT---GKLQARDWEEP--PPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLPKGKKGTGAGGGAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 168          
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: D7G1H6_ECTSI (cwf21 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H6_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 2.180e-36
Identity = 93/174 (53.45%), Postives = 112/174 (64.37%), Query Frame = 0
Query:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQA--WAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSG------------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKK 160
            MYN +G+ TPRGSGTSGHVMSNRSHV+A   R  + RN    G  QA  W  P    +KAN+ELL+H R+RKVEAKIFELQEAMA+RGYSDA+IE KVAEVR+ L+ R        L +   G            +H+    KA +N RMR+AFGLG DY  GE+FD E Q +K
Sbjct:   32 MYNNVGIRTPRGSGTSGHVMSNRSHVRAQAFRMGIDRNT---GKLQARDWEEP--PPRKANEELLDHQRKRKVEAKIFELQEAMADRGYSDAEIEEKVAEVRKGLEEREGSGQKASLLKGKKGXXXXXXXAGTMDSHMRDVKKADDNRRMREAFGLGDDYAAGEAFDEEAQERK 200          
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A7S4B554_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B554_CHRCT)

HSP 1 Score: 115 bits (288), Expect = 3.520e-26
Identity = 77/184 (41.85%), Postives = 113/184 (61.41%), Query Frame = 0
Query:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSG-------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKARQE 177
            MYNGIGL T RGSGT+G+V  N S V   R +++    +TV  +D A     GA +KAN ++++H R+R+VE K+ +LQEA+ E+G ++ADIE +VAE+RR+L        +P  P K S        TH + A K QEN  ++DA G+   Y  G +FD ELQ KK+ +R A++ A +  ++E
Sbjct:    1 MYNGIGLATVRGSGTNGYVTRNLSFVTKTREKQQ----KTVFRADFAG---DGAPRKANTDIIQHNRKREVELKVAQLQEALEEQGLNEADIEKRVAEMRRKL-----LDKLPKEPTKSSSDVKRTGETHADAAAKEQENYALKDALGISSAYVGGSAFDRELQEKKRQERLAEKAAEEAEKEE 172          
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A7S4B540_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B540_CHRCT)

HSP 1 Score: 115 bits (288), Expect = 1.040e-25
Identity = 77/184 (41.85%), Postives = 113/184 (61.41%), Query Frame = 0
Query:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSG-------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKARQE 177
            MYNGIGL T RGSGT+G+V  N S V   R +++    +TV  +D A     GA +KAN ++++H R+R+VE K+ +LQEA+ E+G ++ADIE +VAE+RR+L        +P  P K S        TH + A K QEN  ++DA G+   Y  G +FD ELQ KK+ +R A++ A +  ++E
Sbjct:    1 MYNGIGLATVRGSGTNGYVTRNLSFVTKTREKQQ----KTVFRADFAG---DGAPRKANTDIIQHNRKREVELKVAQLQEALEEQGLNEADIEKRVAEMRRKL-----LDKLPKEPTKSSSDVKRTGETHADAAAKEQENYALKDALGISSAYVGGSAFDRELQEKKRQERLAEKAAEEAEKEE 172          
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A0D0ECU9_9AGAM (cwf21 domain-containing protein (Fragment) n=1 Tax=Paxillus rubicundulus Ve08.2h10 TaxID=930991 RepID=A0A0D0ECU9_9AGAM)

HSP 1 Score: 111 bits (277), Expect = 6.070e-25
Identity = 71/172 (41.28%), Postives = 98/172 (56.98%), Query Frame = 0
Query:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAAD 172
            MYNGIGLTTPRGSGT+G+V  N S ++          ++T      AW       ++ ++ +LEH R+RKVE K  ELQ  + + G ++ADIEAKV E+R +L    +         + S TH   A K  E ++M  A G  +DYTEGE+FD E Q +KK+ R A+RE  D
Sbjct:    1 MYNGIGLTTPRGSGTNGYVQRNLSVLRV---------HETATERAAAWDIAPPKHREPDEAILEHERKRKVEVKCLELQLKLEDDGLNEADIEAKVEELRTKLTADLASFSTSAKSLRPSDTHAIAAAKRAELDKMARALGTRRDYTEGEAFDREKQEEKKMHRVAEREERD 163          
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A8K1CKR8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKR8_PYTOL)

HSP 1 Score: 117 bits (292), Expect = 8.640e-25
Identity = 71/172 (41.28%), Postives = 104/172 (60.47%), Query Frame = 0
Query:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVR----RELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADR 168
            MYNGIGL T RGSGT+G+V  N S+V  +R R+ + RNQ   G   AW  P  +   AN ++L H ++R++E K+ EL   M ERG  + +I+ KV   R    ++L+  T++    G P+    TH     K +EN RM++AFG+ +D+  GESFD E+QAK++ +R A R
Sbjct:    1 MYNGIGLRTVRGSGTNGYVQRNLSYVNPNRTRQTLSRNQQTHGRG-AWDAPSKSKPTANPDILLHEQKRQIEVKLMELSMEMEERGCDEDEIQDKVQREREKLVKQLESATAKASRSGRPD--DSTHARAQRKEEENRRMKEAFGIAEDHVPGESFDPEMQAKRREERIARR 169          
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A6S9RVA4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9RVA4_CHRCT)

HSP 1 Score: 109 bits (273), Expect = 1.120e-24
Identity = 73/168 (43.45%), Postives = 103/168 (61.31%), Query Frame = 0
Query:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSG-------THVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKK 161
            MYNGIGL T RGSGT+G+V  N S V   R +++    +TV  +D A     GA +KAN ++++H R+R+VE K+ +LQEA+ E+G ++ADIE +VAE+RR+L        +P  P K S        TH + A K QEN  ++DA G+   Y  G +FD ELQ KK+
Sbjct:    1 MYNGIGLATVRGSGTNGYVTRNLSFVTKTREKQQ----KTVFRADFAG---DGAPRKANTDIIQHNRKREVELKVAQLQEALEEQGLNEADIEKRVAEMRRKL-----LDKLPKEPTKSSSDVKRTGETHADAAAKEQENYALKDALGISSAYVGGSAFDRELQEKKR 156          
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: L1IZE8_GUITC (cwf21 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IZE8_GUITC)

HSP 1 Score: 107 bits (268), Expect = 2.980e-23
Identity = 68/169 (40.24%), Postives = 107/169 (63.31%), Query Frame = 0
Query:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADRE 169
            MYNG+GL+T RGS T+G+V  N +HV+    + R+   + +   ++  A P  A K+ + E+LEH R+R+ E KI E + A+ ++G S+  IE +VAEVRR+L+  +   ++    +K + +H     KA+E +R   AFG+ +D+TEGE+FD ELQ +KK +R A RE
Sbjct:    1 MYNGVGLSTVRGSATNGYVQRNLAHVQG---KTRVDYQKEL---EKGMAKPSLASKEPSWEILEHQRKRQTEVKIMEFRIALEDKGVSEDVIEERVAEVRRKLESESMHANLDTGAKKLTDSHALAQAKAREAQRFASAFGIRRDHTEGEAFDRELQEQKKAERQAARE 163          
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Match: A0A2K1KTW1_PHYPA (cwf21 domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KTW1_PHYPA)

HSP 1 Score: 111 bits (277), Expect = 3.390e-23
Identity = 71/180 (39.44%), Postives = 110/180 (61.11%), Query Frame = 0
Query:    1 MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAHPQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVRRELDVRTSQQ--DVP-GLPEKGSGTHVEH--AHKAQENERMRDAFGLGKDYTEGESFDHELQAKKKLQRAADREAADKAR 175
            MYNGIGL+TPRGSGT+G++ +N+  VK+  +R  +   Q   G+        G L+KAN ++LEH R+R++E K+ EL++ + ++GY D ++  +V  +R+ L+   ++   D P G   K + T   H  A K ++ E MRDA GL K+  EGE+FD +LQ +KK +R   RE  D+ R
Sbjct:    1 MYNGIGLSTPRGSGTNGYIQTNKFFVKSRPVRSEVKEFQNGQGAG-------GVLRKANKDILEHDRKRRIELKLMELEDQLVDQGYPDEEVLERVEALRKRLEAADAEDGDDAPAGADSKVNSTQSHHIAAQKEKQLETMRDALGL-KEVKEGEAFDRDLQEQKKQERIMAREEKDRER 172          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|71766 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CB89_9STRA5.820e-217100.00cwf21 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5KXT9_9PHAE3.260e-3855.49cwf21 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G1H6_ECTSI2.180e-3653.45cwf21 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S4B554_CHRCT3.520e-2641.85Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4B540_CHRCT1.040e-2541.85Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0D0ECU9_9AGAM6.070e-2541.28cwf21 domain-containing protein (Fragment) n=1 Tax... [more]
A0A8K1CKR8_PYTOL8.640e-2541.28Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6S9RVA4_CHRCT1.120e-2443.45Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
L1IZE8_GUITC2.980e-2340.24cwf21 domain-containing protein n=1 Tax=Guillardia... [more]
A0A2K1KTW1_PHYPA3.390e-2339.44cwf21 domain-containing protein n=2 Tax=Physcomitr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 159..202
NoneNo IPR availableGENE3D6.10.140.420coord: 63..107
e-value: 1.9E-6
score: 29.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..472
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 406..461
NoneNo IPR availablePANTHERPTHR36562SERINE/ARGININE REPETITIVE MATRIX 2coord: 1..358
NoneNo IPR availablePANTHERPTHR36562:SF5SERINE/ARGININE REPETITIVE MATRIX 2coord: 1..358
IPR013170mRNA splicing factor Cwf21 domainSMARTSM01115cwf21_2coord: 63..108
e-value: 1.9E-7
score: 40.8
IPR013170mRNA splicing factor Cwf21 domainPFAMPF08312cwf21coord: 63..103
e-value: 6.3E-10
score: 39.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_49contigContig_49:717180..719240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|71766mRNA_10484Tribonema minus UTEX_B_3156 mRNAContig_49 717090..719310 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|71766|CE71765_151 ID=Trimin1|71766|CE71765_151|Name=jgi.p|Trimin1|71766|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=473bp
MYNGIGLTTPRGSGTSGHVMSNRSHVKADRMRERMGRNQTVGGSDQAWAH
PQGALKKANDELLEHARRRKVEAKIFELQEAMAERGYSDADIEAKVAEVR
RELDVRTSQQDVPGLPEKGSGTHVEHAHKAQENERMRDAFGLGKDYTEGE
SFDHELQAKKKLQRAADREAADKARQEARAKREKETRQREKETRKRAKEE
AQKAKEPPAKEQPRESEAGELVEEDDRYQGASTRDDKSDGEGAHKGAASY
DDMFSRGEYEVLKGEESKEEEQEEEEEPERTHKHSRHDGRSGRVADDRGN
GKAAPERHDGRHAKHRRGEAESDVREEREGRRAPEEVRGRSGRREPKERG
DSRERVAAVAKVDRGTAAKLAGPAEKTRKSKQELPLKKAKLSKHEKQESK
RRPKPSRSSSSSSSDFESGSESDSSSSSSSSSSSGSSSSSGSSSGSSSSS
SSSSSSSSRSATPPRKKHRSSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013170mRNA_splic_Cwf21_dom