mRNA_10120 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836C9E5_9STRA (CHRD domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9E5_9STRA) HSP 1 Score: 213 bits (541), Expect = 5.860e-70 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1
Query: 1 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL
Sbjct: 1 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 104
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YML2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YML2_9STRA) HSP 1 Score: 175 bits (444), Expect = 7.130e-49 Identity = 83/92 (90.22%), Postives = 87/92 (94.57%), Query Frame = 1
Query: 1 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHT 276
TDGPGDATGQGTAKIVLQGQKLCFVLTTNL+GIVAGHIHKGA G+DGDVFIDLLG LADL KNPLKAC+QLS AEAQALL DPAGYY+NVHT
Sbjct: 481 TDGPGDATGQGTAKIVLQGQKLCFVLTTNLQGIVAGHIHKGAAGIDGDVFIDLLGGLADLTKNPLKACVQLSAAEAQALLADPAGYYINVHT 572
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836C9W3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W3_9STRA) HSP 1 Score: 141 bits (355), Expect = 8.480e-37 Identity = 64/99 (64.65%), Postives = 78/99 (78.79%), Query Frame = 1
Query: 16 DATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
D GQGTAK + G+ LCF + TNL+GIVAGHIH+GA GVDGDV++DL G +ADL NPL+AC+ L+ A+A+AL+ P YYVNVHTDQ P GAIRSQL
Sbjct: 268 DPEGQGTAKFAIAGRTLCFTMKTNLKGIVAGHIHQGAAGVDGDVYVDLFGGIADLTANPLQACITLTYAQAKALVKTPTDYYVNVHTDQFPDGAIRSQL 366
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YYA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA4_9STRA) HSP 1 Score: 107 bits (268), Expect = 4.890e-27 Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 31 GTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHT 276
G + + G+ LCF + TNL+GIVA HIH+GA GVDGDV++DL G +ADL NPL+AC+ L+ A+A+AL+ P YYVNVHT
Sbjct: 135 GHRQFAIAGRTLCFTMKTNLQGIVAEHIHEGAAGVDGDVYVDLFGGIADLTANPLQACITLTHAQAKALVKTPTDYYVNVHT 216
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YI34_9STRA (CHRD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI34_9STRA) HSP 1 Score: 100 bits (249), Expect = 9.610e-25 Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 4 DGPGDATGQGTAKIVL-QGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQ-ALLTDPAGYYVNVHTDQHPGGAIRSQL 312
D GD G GTA + +CF + T L+G+ AGHIHKG VG +GDV +DLL LAD NPL+ C+ L A+L +PAG+YVN+H P GAIR Q+
Sbjct: 59 DPTGDPNGGGTATFFTPDDETICFSIDTTLDGVTAGHIHKGVVGTNGDVVVDLLSVLADTKVNPLEGCVDLGGQRPLLAILENPAGFYVNIHNIDFPKGAIRGQM 163
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A397NQ64_9SPHN (CHRD domain-containing protein n=1 Tax=Hephaestia caeni TaxID=645617 RepID=A0A397NQ64_9SPHN) HSP 1 Score: 83.2 bits (204), Expect = 3.350e-18 Identity = 47/105 (44.76%), Postives = 56/105 (53.33%), Query Frame = 1
Query: 7 GPGDATGQGTAKIVLQGQKLCFVLTTNLEGI---VAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
GPGD G GT K+ T ++ GI A HIHKGA+GV G + L A K CL + A A A++ DPAGYYVNVHT +P GAIR QL
Sbjct: 39 GPGDPDGTGTVKVTADSATNTVCYTLDVRGISAPTAAHIHKGALGVAGPPVLPL----APPTSGRSKECLSVDKALAAAIIADPAGYYVNVHTADYPKGAIRGQL 139
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A535UIK2_9CHLR (CHRD domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535UIK2_9CHLR) HSP 1 Score: 77.4 bits (189), Expect = 5.920e-16 Identity = 41/103 (39.81%), Postives = 53/103 (51.46%), Query Frame = 1
Query: 10 PGDATGQGTAKIVLQGQKLCFVLTTNLEG--IVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
PG + G GTAKI + G LC+ LT N +AGHIH+G G G + + L A C ++ A + +P YYVN+HT HP GAIR QL
Sbjct: 43 PGPSGGAGTAKITIDGTNLCYDLTWNAATGTPIAGHIHQGPKGASGPIVVTLSPTTAH-------TCTTVAPTIASGIAGNPGNYYVNLHTQDHPDGAIRGQL 138
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: UPI001EF6F767 (CHRD domain-containing protein n=3 Tax=Frankia TaxID=1854 RepID=UPI001EF6F767) HSP 1 Score: 80.5 bits (197), Expect = 8.130e-16 Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 13 GDATGQGTAKIVLQGQKLCFVLTTNLEGIVA---GHIHKGAVGVDGDVFIDLLG-ALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
GD G TA I LQG ++ F + +GI A GHIH+GA GV+GDV + L G A+ + + A A A AL DPAG+Y+N+HT + PGGA+R QL
Sbjct: 81 GDPDGSATAIIRLQGDRVTFAFSW--KGIGAPTLGHIHQGAAGVNGDVKVALWGTAVPETVTADAGAVTVSDPAIADALRADPAGFYLNLHTQEFPGGAVRGQL 182
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: UPI001B83835D (CHRD domain-containing protein n=1 Tax=Sphingomonadaceae bacterium LXI357 TaxID=2826939 RepID=UPI001B83835D) HSP 1 Score: 76.3 bits (186), Expect = 2.020e-15 Identity = 43/105 (40.95%), Postives = 56/105 (53.33%), Query Frame = 1
Query: 7 GPGDATGQGTAKIVLQGQK--LCFVLTT-NLEGIVAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
GPGD G GTAK+ +C+ LT ++ A HIH+GA GV G + L + K CL + A A++ +P GYYVNVHT +P GAIR QL
Sbjct: 46 GPGDPDGSGTAKVTADATTGTICYELTVQDISQPTAAHIHQGARGVAGPPVLQLKPP----VTGSSKECLDVDKQLAAAIIANPTGYYVNVHTADYPKGAIRGQL 146
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A5C6ULP5_9SPHN (CHRD domain-containing protein n=2 Tax=Sphingorhabdus soli TaxID=2601267 RepID=A0A5C6ULP5_9SPHN) HSP 1 Score: 79.3 bits (194), Expect = 2.700e-15 Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 1
Query: 7 GPGDATGQGTAKIVLQG--QKLCFVLTTNLEGI-VAGHIHKGAVGVDGDVFIDLLGALADLIKNPLKACLQLSTAEAQALLTDPAGYYVNVHTDQHPGGAIRSQL 312
GPGD G GTAKI +C+ +T G A H+H+GA GV G + A CL + A A +++ DP+ YYVNVHT +PGGAIR QL
Sbjct: 249 GPGDPDGTGTAKITADATTNTVCYDITVQRIGTPTAAHLHRGAAGVSGPPVVTFKAPTAGATSE----CLSVDKALAASIIADPSNYYVNVHTADYPGGAIRGQL 349
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836CBG2_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG2_9STRA) HSP 1 Score: 1016 bits (2627), Expect = 0.000e+0 Identity = 524/524 (100.00%), Postives = 524/524 (100.00%), Query Frame = 1
Query: 1 MAAAGSSGSDYGDGTACCPEGCTSCGASAEECRALGLELSSECCLDVAVAVSCDTSEPPCTLAVSGEGEGAQEALEPVEETAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQGSPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGEDDSFNAEQEELQPRMAALL 1572
MAAAGSSGSDYGDGTACCPEGCTSCGASAEECRALGLELSSECCLDVAVAVSCDTSEPPCTLAVSGEGEGAQEALEPVEETAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQGSPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGEDDSFNAEQEELQPRMAALL
Sbjct: 1 MAAAGSSGSDYGDGTACCPEGCTSCGASAEECRALGLELSSECCLDVAVAVSCDTSEPPCTLAVSGEGEGAQEALEPVEETAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQGSPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGEDDSFNAEQEELQPRMAALL 524
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835Z777_9STRA (GH26 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z777_9STRA) HSP 1 Score: 416 bits (1070), Expect = 4.530e-130 Identity = 241/451 (53.44%), Postives = 303/451 (67.18%), Query Frame = 1
Query: 100 ALGLELSSECCLDVAVAVSCDTS-EPPCTLAVSGEGEGAQEALEPVEE-----TAAERELRRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHKKELRTYQGPQG--SPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDT-AGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAIT-KRTMCIAEMSSTNHCGG-KATWIKDTWATLARDYPKIVSVNWFFEDKM--NVGKDWDL 1413
AL L+ SSECC+D +C + PC++ + GE E L+P E T +RELR+RRXXXXXXXXXXXXXXXXXXXXXX G K + + PQG + DP+C G +D+DVQYCCP CSRCSN+ TC NFS EEP CCGA IA S RPC + APC L+ +F PG+ R A VG W +G D LPQ+E G+K D+V++Y + W V+ +LD V+LVMEF D+YPNLRD+ +GK+D ++DFGK A ADGR++ +RPLHELN WYNW R GN+ DF AF+ +V+T RSTG NFK+Q+S+AAKNS + PF+DFY GD YVDQ+CVSAYN+CGTGTY+ NKS EIINT+Y+Q+ A +++CIAEMS+T+ CG KA WI D W +LA DYPK SVNWFFE K + KDW L
Sbjct: 167 ALLLDASSECCVDADSLPACSADGKAPCSMQLIGE---VAEQLQPEEGDDADLTEEQRELRKRRXXXXXXXXXXXXXXXXXXXXXX-------GKKPKPKPPVKPQGGGAGDPFCLNGMLDDDVQYCCPSNCSRCSNSKTCTNFSPAEEPTCCGAMIADSGRPCGLFPAPCYLDQTKFQ-NAPGSSKRTANVGAWFAGGPDA-LPQQEQNLGVKLDTVMMYLPVGPDLKWSAVSDILDTKRQVQLVMEFYDSYPNLRDVKSGKYDQYLKDFGKDAKADGRQLTIRPLHELNGDWYNWDALRNGNNAEDFPGAFQHVVTTLRSTGGNFKFQISYAAKNSAESNMPFKDFYPGDSYVDQICVSAYNTCGTGTYKSNKSFSEIINTWYFQVTAFAPSKSLCIAEMSTTDQCGSDKAQWITDAWHSLADDYPKFTSVNWFFESKKLGSAYKDWAL 605
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836C8I3_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I3_9STRA) HSP 1 Score: 325 bits (834), Expect = 9.310e-100 Identity = 171/419 (40.81%), Postives = 228/419 (54.42%), Query Frame = 1
Query: 418 CNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYP---NLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELN----------------------SAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTY-RENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKAT------------------------------------WIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLL 1488
C V ED +YCC C CS++ +C F + KCCGA I + R C+ APC + +RF PG R+ VGVW GD + +E + + F +L+ + WDY+AS LD VELVMEF + P NL+D+ GK+D+ ++DFG+AAA DGRRI +R LHELN WY WG F PGNS A+K VS RSTGANFKYQ+S+ A+N+ +TP + F+ GDEYVD+VCV+AYN+CGT + R SL I+NT+Y Q+ A T + +CI+E+SST+HCGGK W+ W LA YP++ S+NWFFEDK+NV KDWDLH+ E SA++ GY FE+ T R +
Sbjct: 71 CVLNDVREDTRYCCHVSCDVCSDSRSCARFPKNQISKCCGAHIKDNGRSCETGQAPCNVKKSRFSGNGPGTVKRDTSVGVWPGGDPKDGVKAKEKELHMHFGHQLLFADVRNLDWDYIASFLDGNRAVELVMEFNSDTPFTANLKDVIGGKYDTDLKDFGRAAAKDGRRITVRLLHELNVFKYKRQGNXXXXXXXXXXXXXGDWYPWGAFTPGNSPEKLVTAYKHAVSLLRSTGANFKYQLSYNARNAGGNSTPLKAFWPGDEYVDEVCVAAYNTCGTSSNPRMTLSLTAIMNTWYKQITAFTTKKICISEISSTSHCGGKVRAKVNCEVAAGALEIKEVPIDSLANEVNAYAMCDMPEWLLAAWKDLANKYPRVDSINWFFEDKLNVKKDWDLHTSAEKSAWIKGYKAFEAATTGRKV 489
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835ZDK0_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK0_9STRA) HSP 1 Score: 308 bits (790), Expect = 1.620e-93 Identity = 158/314 (50.32%), Postives = 208/314 (66.24%), Query Frame = 1
Query: 613 PKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNV-GKDWDLHSPDEISAFVNGYHNFESITK-RRLLQEQQGGLGEDDSFNAEQEEL 1548
P PG+ RN+RVGV LSG +V QRE Y ++FDS ++YQ++ W V +VLD V+ VMEF D NLR IA G +D ++ FGKAA DGR I +RPLHE+N WY W VF PGNS+SDF+NAFKR+VS +STG NFK+Q+S+AA+N+ PF DFY GD YVD VCVSAYN CG TY ENK L E + +Y +M + CIAEMSST C GK WIKD+W TL Y K ++NWFF++K+++ G+DWDL+S +++AFV+G+ F+S T RRL + + GE+ F ++ L
Sbjct: 178 PPPPGSVKRNSRVGV-LSGPRMSV-QQREKAYKVRFDSELMYQSVTDLDWGKVKAVLDDKKGVDFVMEFGDEGSNLRSIAQGAYDHYLQTFGKAAKKDGRTINVRPLHEMNGEWYPWCVFTPGNSLSDFKNAFKRVVSVLKSTGGNFKFQLSYAAQNASGHKNPFMDFYPGDAYVDAVCVSAYNLCGA-TYDENKPLAESLLPWYAEMSRSVNKPFCIAEMSSTGFCNGKDQWIKDSWKTLTYQYTKFNNINWFFQNKVDLLGRDWDLNSRADVNAFVSGFRMFKSATGGRRLFADIEPAEGEEADFEVAEDAL 488
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835ZA06_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA06_9STRA) HSP 1 Score: 298 bits (764), Expect = 1.210e-92 Identity = 139/262 (53.05%), Postives = 183/262 (69.85%), Query Frame = 1
Query: 733 LYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGED 1518
+Y + W YVAS +D V+LV+EF+D NL+ IA+G +DSK+R FGK AA DGR+IY+R LHE+N WYNW F N+V DF+NA+K V+ RSTGAN K+QMS+AA N+ K+ TPF+DFYVGDEYVDQVC SAYN CG TY +NKSL ++ FY ++Q TKR +CIAEMSST C GK WI TW +LA + ++ ++NWFFE+K N+G+DWDL++ +I AF +GY F +T RRL + G E+
Sbjct: 1 MYLPVTDLKWSYVASKIDAYGKVQLVIEFIDQGANLKKIASGAYDSKLRAFGKDAAKDGRQIYVRMLHEMNGDWYNWCAFFGDNTVGDFKNAYKHAVTVLRSTGANIKFQMSYAANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGA-TYPKNKSLEDVFGDFYTEVQTFTKRPICIAEMSSTGICKGKPAWISATWKSLATKFTRVSTINWFFENKKNLGRDWDLNTKADIHAFTSGYRLFRKVTGRRLEAIESGASAEE 261
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835YSW1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW1_9STRA) HSP 1 Score: 298 bits (763), Expect = 2.370e-89 Identity = 145/358 (40.50%), Postives = 215/358 (60.06%), Query Frame = 1
Query: 409 DPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAIT-KRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDK-MNVGKDWDLHSPDEISAFVNGYHNFESITK 1476
DPYC G + + CC GC+ C ++ + + CC + IA++ R CD + P + +W RE KY +KFDSV+LY + W +V + LDKG V+LV+EF+DNY NL D+A GK+D ++ FG A ADGR IYLRPLHE N WY WG+FR GNS+ F+ A++ +++ R+TG NFKYQ+S+ K+++ T F DFYVGD+Y+ Q+CVSAYN G Y +++SL I+ Y Q ++ + +C+AEMS+T++ G K WI DTW +LA + + ++NWF E+K ++V DWDL++P ++ A+V+GY NF++ TK
Sbjct: 196 DPYCLKGVLHPNGAQCCKAGCTTCGSSRCA--YDALGKDACCSSVIAKNGRSCDYFPGP--------------------QQSIW----------SREAKYKMKFDSVLLYLPVQYLSWSWVKTFLDKGTGVQLVIEFIDNYSNLSDVAAGKYDGYLKKFGAFAKADGRLIYLRPLHEFNGDWYPWGIFREGNSLDAFKAAYRHVITVLRATGGNFKYQLSYNVKSANSNPTKFSDFYVGDDYL-QICVSAYNMAGA-RYPDSRSLATILGYAYAQFESFAPSKPLCLAEMSTTSYGGDKPLWITDTWKSLAYQFTAVTTINWFLENKNVDVNVDWDLNTPADVKAWVDGYWNFKTATK 519
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835ZP96_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP96_9STRA) HSP 1 Score: 294 bits (752), Expect = 9.340e-89 Identity = 146/308 (47.40%), Postives = 202/308 (65.58%), Query Frame = 1
Query: 637 RNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYP-NLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQ---------VCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESIT---KRRLLQEQQGGLGEDD 1521
R +G+ LSG T + QRE Y +KFD+V++Y + W YVA+ L+ V+LV+EF D+ NL+ IA+G +D + FG+ A DGRRIY+RPLHE N WY WGV+ PGN++ DFRNA+KRI+S +ST AN K+QMSFAAKN+ K+ PF+DF+VG+EYVDQ +CV++YN CG TY +N+ L +I+ TFY + TKR +CIAE+SST C GK W+K +W +LA D+ ++ +VNWFFE+K ++ +DWDL+S ++ A+V GYH F T R LL DD
Sbjct: 83 RKTTIGL-LSGPQKT-MKQREKSYKVKFDAVMMYLPIQDLQWRYVANQLNDKKSVQLVIEFFDSGSGNLKKIASGAYDKYLIKFGRDAKKDGRRIYVRPLHEFNGDWYPWGVYYPGNNIKDFRNAYKRIISVLKSTRANLKFQMSFAAKNATKKKVPFKDFFVGNEYVDQASHRLKFKSLCVTSYNQCGA-TYPKNRPLKKILKTFYSSVTKFTKRPLCIAEISSTGICKGKPYWLKQSWRSLAYDFNRVTTVNWFFENKKSLHRDWDLNSKADVKAWVQGYHAFAKATGHKSRALLDSPDATANNDD 387
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A836CCT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT0_9STRA) HSP 1 Score: 308 bits (789), Expect = 1.950e-86 Identity = 156/343 (45.48%), Postives = 214/343 (62.39%), Query Frame = 1
Query: 454 CCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITK-RTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMN-VGKDWDLHSPDEISAFVNGYHNFESITK 1476
CC GCS+C C N E CC IA CD G PC++N + +P R V V LSG ++ L RE Y + FD +++Y + W ++ LD G +V+LV+EF+D+Y NL D+A GK+D + FG+AAA DGR I +RPLHE N WY WG R GNS+ DF AFK +V+T R+TGANFKYQ S+A KN++ + TP ++YVGD+YVDQVCVSAYN CG +Y NK L + +FY+Q+ + +T CIAEMSST HC GK W+ DTW +LA + ++ +NWF E+K++ + +DWDL+S ++ A+V GY+ FE K
Sbjct: 951 CCSGGCSKCGKP-DCANDPLGAE-HCCPQVIAAEALSCDIAGPPCLVNTDKPIVIDPTAVRRKTSVQV-LSGS-ESSLEDREGHYHMTFDGILVYLPVQNLNWKWIVGFLDAGRNVDLVIEFVDSYSNLADVAAGKYDRFLGKFGQAAADDGRVINIRPLHEFNGDWYPWGALRQGNSMQDFLLAFKHVVTTLRATGANFKYQQSYAMKNANNDPTPLSEWYVGDDYVDQVCVSAYNLCGV-SYPTNKPLASMYGSFYYQVLSFAPTKTQCIAEMSSTGHCEGKPQWLLDTWRSLAYQFTRVTVINWFLENKIDSLNRDWDLNSKADVEAWVEGYNEFEKGQK 1288
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835ZCD2_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD2_9STRA) HSP 1 Score: 285 bits (729), Expect = 2.900e-86 Identity = 148/365 (40.55%), Postives = 223/365 (61.10%), Query Frame = 1
Query: 403 SPDPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARF-DPKNPGNPV---RNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVG-DEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNV-GKDWDLHSPDEISAFVNGYHNFESITKR 1479
S DPYC++G + CC + C+ C E CC I S+ C++YG PCI++ RF +P P +P RN+ VGV L+G D + +RE +YG+ FD+ ++YQ + + Y+ V++ G V+LV+E DN N IA+G +D+++ +FG AAA GR+I R LHE+N WY W F PGNS+ F AF R+V+ R +GA+ K Q+++AA+N+ PF DF+ +YVD+VCVSAYN CG Y ENK L +I+ +Y Q+ T +CIAEMSST HC GK WI D W T+ ++ ++ ++NWFFE+K+++ +D+DL++ ++ FV+G++NF+ T R
Sbjct: 11 SGDPYCSSGKL-YGAGICCSEACAACGTQNDGCASDAAGEGSCCADVITASELSCNQYGPPCIIDEERFAEPSTPADPWSIHRNSVVGV-LTGP-DKTVAEREAQYGMTFDAELIYQNVLYLNFTYLQDVMESGKKVQLVIEINDNLAN---IASGTYDTQLYNFGLEAAAYGRKISTRILHEINGDWYPWCAFAPGNSIDQFYEAFVRVVNALRGSGADLKIQLAYAAQNAAGYDNPFIDFFEPIKDYVDEVCVSAYNLCGD-KYSENKPLRDIMGEWYKQVTWFTDLPICIAEMSSTGHCEGKPAWIADAWDTITNEFTQVRTINWFFENKIDLLNRDYDLNTSSDVQQFVDGFNNFKYATSR 368
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Match: A0A835Z8N1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N1_9STRA) HSP 1 Score: 265 bits (677), Expect = 4.170e-78 Identity = 139/373 (37.27%), Postives = 212/373 (56.84%), Query Frame = 1
Query: 409 DPYCNAGFVDEDVQYCCPQGCSRCSNALTCPNFSDQEEPKCCGAAIAQSDRPCDRYGAPCILNAARFDPKNPGNPVRNARVGVWLSGDLDTVLPQREDKYGIKFDSVVLYQTMDTAGWDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPG----NSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTNHCGGKATWIKDTWATLARDYPKIVSVNWFFEDKMNVGKDWDLHSPDEISAFVNGYHNFESITKRRLLQEQQGGLGE 1515
DP C G +++D CC + C +C C F+ CC I +++ C +Y APC++ A PK R VGV G T L RE +YG+K DS++++Q + +D+VA+ +++G V+LV+EF +L+DIA G D + DF A DGR+ Y+RPLHE N WY WG++ G + +SDF+ A+K IV+ FR+ A ++Q + N + TPF++FYVGD+YVD VC S YN G + + ++ FY QM T + +CI+EMS+T++ K WIKDTW+++A + +I +VNWF E+K + +WDL++ E A++NG ++F S T R Q G G+
Sbjct: 51 DPACANGILNKDGSVCCTKPCGQCGGT-GCNTFTGGSS-NCCAGPIRTANKSCTQYAAPCVMGATSGTPKPT---TRKTMVGVQPGG---TPLGTREGQYGVKVDSLLMFQKVTDLHFDWVATEMNRGHTVQLVLEFFGT--SLKDIAAGGSDGVLSDFANKAKTDGRQFYIRPLHEFNGDWYPWGIYVDGTLHTDLLSDFKAAYKHIVTIFRNAKAPVQFQQGYNNSNPRDDKTPFKNFYVGDDYVDMVCFSLYNFAGIPNHSSG-TFTKLAGDFYNQMTLATSKDLCISEMSTTSYGVDKPAWIKDTWSSIANQFTRITTVNWFLENKPD--GNWDLNNGPEQQAWINGLNSFRSTTAVRRAALQLGAPGD 410 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350486 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|350486 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10120 ID=mRNA_10120|Name=jgi.p|Trimin1|350486|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=314bp|location=Sequence derived from alignment at Contig_64:421121..424756- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ACCGATGGACCGGGCGACGCCACAGGCCAAGGCACTGCGAAGATTGTCCTback to top protein sequence of jgi.p|Trimin1|350486 >Trimin1|350486|estExt_Genemark1.C_Ctg_640050 ID=Trimin1|350486|estExt_Genemark1.C_Ctg_640050|Name=jgi.p|Trimin1|350486|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=104bp TDGPGDATGQGTAKIVLQGQKLCFVLTTNLEGIVAGHIHKGAVGVDGDVFback to top mRNA from alignment at Contig_64:421121..424756- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10120 ID=mRNA_10120|Name=jgi.p|Trimin1|350486|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3636bp|location=Sequence derived from alignment at Contig_64:421121..424756- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_64:421121..424756- >mRNA_10120 ID=mRNA_10120|Name=jgi.p|Trimin1|350486|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=312bp|location=Sequence derived from alignment at Contig_64:421121..424756- (Tribonema minus UTEX_B_3156 )back to top |