mRNA_P-littoralis_Contig75.100.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig75.100.2
Unique NamemRNA_P-littoralis_Contig75.100.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: D8LEZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ9_ECTSI)

HSP 1 Score: 751 bits (1938), Expect = 1.360e-254
Identity = 417/474 (87.97%), Postives = 433/474 (91.35%), Query Frame = 3
Query:  612 RFENPRNEALNDRDRIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQPAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEFD 2033
            RFENPRNEALNDRDRIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQ AAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMS+FFN+VINRALE PI+GGAVASVYVSQEKAFAFLELKTMELATSVL+LDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIIS+TVPDSDNKVFIGGLPYNL+EDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSG   XXXXXXXXXXXXXXXX                              QAMAALDPNA+QAAMA+L QGGAG VPS AA++ VAANLIRAIPPTRVLVMLNMVTEAEL DPQEYEDIVDDIQQECSSHGTVLS+IVPRPGEADAS+AVGKVFVEYDT+DSAQKAALSLAGRQFG NIVKVEY+NEEKFAR+EF+
Sbjct:  166 RFENPRNEALNDRDRIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQSAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSSFFNEVINRALEYPIDGGAVASVYVSQEKAFAFLELKTMELATSVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGXXXXXXXXXXXXXXXXXXXMPGMQMGGGQQMGLTAPPTQQEQMQLA---QAMAALDPNASQAAMASLAQGGAGAVPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELRDPQEYEDIVDDIQQECSSHGTVLSIIVPRPGEADASRAVGKVFVEYDTKDSAQKAALSLAGRQFGANIVKVEYLNEEKFARREFE 636          
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A835ZGN1_9STRA (Splicing factor U2AF subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN1_9STRA)

HSP 1 Score: 338 bits (868), Expect = 2.330e-101
Identity = 202/453 (44.59%), Postives = 267/453 (58.94%), Query Frame = 3
Query:  687 RPSNFDVKP---DDPTAVALL-EASAQQMLVSRGSGVMQPAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAA-SGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
            R SNFDV P   D+ TA  +  +A  QQ L +  +     A P  M      + QQTRHARRLY+G  P+  E+E+  FFN+V+ RAL    E   V SVY++Q++ FAF+EL+++ L T+ + LDG++Y +  LK+RRPSDYNP  VP+  +  +  LNLS LGI+SNTVPDS NKVFIGGLPY+L+E+QV+ELLSAFG LK+ HLV+D G+  SKGY FCEY +  VT+IACEGL+GM LGDKTLTVR       S                                                  QAMAALDP A +A                  ++  AA ++R + PTRVLV++NMV E +L D QEY DI++D++ EC  +G + +VI+PRPGE      VGKVF+EY     AQ AA++LAGRQF   IVK +Y +E +FA ++ 
Sbjct:    3 RGSNFDVLPEGMDEATANQIAAQAFLQQTLPAAAAAA---AVPLPMGGGAAPTMQQTRHARRLYVGNIPRVPEQEVQRFFNEVLTRALGGRQESDPVVSVYLNQDRGFAFVELRSVALTTAAIQLDGLMYGDISLKIRRPSDYNPSAVPSEFTNEVVHLNLSALGIVSNTVPDSPNKVFIGGLPYHLTEEQVKELLSAFGALKALHLVKDAGATNSKGYAFCEYQDPAVTSIACEGLNGMALGDKTLTVRKVRGHALS-------------------------------------------VAALMLAQAMAALDPTAHKAVT----------------ESAEAATVVRTMAPTRVLVLMNMVGEEDLKDDQEYTDILEDVRDECKQYGELKTVIIPRPGETG----VGKVFLEYAEVQQAQAAAMALAGRQFASKIVKAQYHDESRFAARDL 389          
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A8K1C271_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C271_PYTOL)

HSP 1 Score: 332 bits (850), Expect = 1.300e-96
Identity = 197/451 (43.68%), Postives = 270/451 (59.87%), Query Frame = 3
Query:  693 SNFDVKPDDPTAVALLEASAQQML---VSRGSGVMQPAA--PQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
            SNFDV+P   T       +AQ +L   ++  SG + PA+  P        AS+QQTRHARR+Y+GG  +  E+E++ FFNDVI+RAL    EGGAV SVY+++E+ FAF+ELKT+EL T+ ++LDG+ ++   LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV DS +K+F+GG+PY+L++DQV+ELL AFGPLKSFHLV++  +  SKGYGFCEYL+  VT  AC GL+ M LGDKTLTVR A  + ++                                                       LDP  A     ++   G G+  +P               P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G VLS+++PRP +   + AVGKVFVE+    SAQ A+  L GR F +  V VE+++E+K+AR++F
Sbjct:  159 SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGAVGPASFGPPPANGTYSASHQQTRHARRIYVGGIGEVAEQEITEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKTIELTTACMNLDGVSFRGQPLKIRRPNDYNPSNVPKDLGPIPQLNLAALGIVSTTVQDSPHKIFVGGIPYHLNDDQVKELLQAFGPLKSFHLVKELNTNMSKGYGFCEYLDPNVTDAACIGLNDMKLGDKTLTVRRAMSQENA--------------------------------------KAVASAAGSVNSGLSMGLDPTTAALQTISMAGFGLGIPSAPLGN------------PSRVIVLLNMVTADELEDDEEYNDILDDIKTECERFGPVLSLVIPRPRDGYHT-AVGKVFVEFADIASAQGASQELHGRGFANRTVSVEFMDEQKYARRDF 558          
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A5D6XX73_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX73_9STRA)

HSP 1 Score: 332 bits (851), Expect = 4.560e-96
Identity = 212/494 (42.91%), Postives = 279/494 (56.48%), Query Frame = 3
Query:  657 IERRRKRRALRPSNFDVKP----DDPTAVALLEASAQQMLVSRGSGV------------MQPAAPQ------LMARLP----GASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPA-----TDR-----GSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
            I RRRK+     S FDV+P    ++  A    +A  QQ + +   G             + P+AP       +   LP    G ++QQTRHARRLY+GG  +  E+E++ FFNDVI+RAL   +EGGAV SVY+++E+ FAF+EL+++EL T+ ++LDG+ ++   LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+FIGGLPY+L+E+Q++ELL AFGPL+SFHLV++  S  SKGYGFCEYL+   T  AC GL+ M LGDKTLTVR A     T +     GSS H                                                         A+QAA+  L   G G    P+              P+RV+V+LNMVT  EL D  EY DIVDDI+ EC   G V+S+++PRP +   S AVGKVFVEYD   SAQ AA  L GR F + IV VEY++E K+AR+EF
Sbjct:  190 IVRRRKK-----SYFDVRPPGVTEENAAAYAAQAILQQNMATHAGGAGAVAFNPPAAVAVAPSAPAHSHSALVPGLLPPQSFGGNSQQTRHARRLYVGGLGEVGEQEITEFFNDVIDRALGERMEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVAFRGQPLKVRRPNDYNPATVPTELGPIPQLNLAALGIVSTTVCDGPGKIFIGGLPYHLNEEQIKELLQAFGPLRSFHLVKELSSNMSKGYGFCEYLDPNSTDAACLGLNEMKLGDKTLTVRRAMTPEYTSKAAGGGGSSSHPNPGMEL--------------------------------------------------ASQAALQALSMAGLGAPSGPSGA------------PSRVVVLLNMVTPEELDDEDEYADIVDDIKSECERFGRVISIVLPRPRDGFYS-AVGKVFVEYDAVPSAQAAAAELHGRGFSNRIVAVEYMDEHKYARREF 615          
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A484DRL9_BRELC (Splicing factor U2AF subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRL9_BRELC)

HSP 1 Score: 329 bits (843), Expect = 1.050e-95
Identity = 213/487 (43.74%), Postives = 278/487 (57.08%), Query Frame = 3
Query:  654 RIERRRKRRALRPSNFDVKP----DDPTAVALLEASAQQMLVSRGSGVMQPAA-------PQLMARLPGASN-------------QQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQG-GAGVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
            RI RRRK+     SNFDV+P    D+  A    +A  QQ + +  SG + PA+       P   +  PG S+             QQTRHARRLY+GG  +  E E++ FFNDVI+RALE    GG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+F+GGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEYL+  VT  AC GL+ M LGDKTLTVR                                                          +AM+  +  A   A  N+  G   G+ PS AA   +    I  +P   PTRV+V+LNMVT  EL D  EY DIVDDI+ EC   G V+S+++PRP +   S AVGKVF+E+    SAQ AA  L GR F + IV VE++ EE +AR+E 
Sbjct:  132 RIIRRRKK-----SNFDVRPPGVTDENAAAYAAQAILQQNMAAL-SGAVGPASFGPPQISPSSTSTTPGYSHASXXXXXXFAGMSQQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALEEKQPGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYHGQPLKIRRPNDYNPVTVPTELGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYLDVSVTDAACMGLNDMRLGDKTLTVR----------------------------------------------------------RAMSQENAKAVANAAGNVNTGLEMGLDPSQAAMQAMTLAGITGVPLGVPTRVIVLLNMVTRDELEDDDEYADIVDDIKGECERFGRVVSLLLPRPRDGILS-AVGKVFIEFQDVASAQGAATELHGRGFSNRIVSVEFMPEELYARREI 553          
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: K3WB93_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB93_GLOUD)

HSP 1 Score: 324 bits (831), Expect = 1.760e-93
Identity = 207/473 (43.76%), Postives = 272/473 (57.51%), Query Frame = 3
Query:  693 SNFDVKPDDPTAVALLEASAQQML---VSRGSGVMQPA---------APQLMARLPGA--------SNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANL----IRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
            S FDV+P   T       +AQ +L   ++  SG + PA         AP   A +PG         ++QQTRHARR+Y+GG     E E+S FFNDVI+RAL    EGGAV SVY+++E+ FAF+EL+++EL T+ ++LDG+ ++   LK+RRP+DYNP  VP   GPIP LNL+ LGI+S TV D   KVFIGGLPY+L+++QV+ELL AFGPLKSFHLV++  S  SKGYGFCEY++  VT  AC GL+ M LGDKTLTVR A  + ++                                                            A A+ A  +  G  +  +P+  A  A NL    I ++P   PTRV+V+LNMVT  EL D +EY DIVDDI+ EC   G V S+++PRP +   S AVGKVFVEY    SAQ AA  L GR F +  V VEY++E K+AR++F
Sbjct:  188 SYFDVRPPGVTEENAAAYAAQAILQQNMAALSGAVGPASFGPPPPPIAPPAHAIVPGVVASHTFGGNSQQTRHARRIYVGGIGDVNEAEISEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVSFRGQPLKIRRPNDYNPSTVPKDLGPIPTLNLAALGIVSTTVSDGPGKVFIGGLPYHLNDEQVKELLQAFGPLKSFHLVKELNSNLSKGYGFCEYVDINVTDSACLGLNDMKLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNSGLEMGLNPSHAALQAMNLAGFGIPSMPLGTPTRVIVLLNMVTPEELEDEEEYADIVDDIKGECERFGRVNSIVLPRPRDGFYS-AVGKVFVEYGDVPSAQAAAAELHGRGFSNRTVAVEYMDEHKYARRDF 600          
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: F0WWX4_9STRA (Splicing factor U2AF subunit n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WWX4_9STRA)

HSP 1 Score: 320 bits (820), Expect = 1.540e-92
Identity = 194/460 (42.17%), Postives = 260/460 (56.52%), Query Frame = 3
Query:  687 RPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQPAAPQLMARLPGASN---------QQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
            R SNFDV+P   T       +AQ +L    + +     P      P  S          QQTRHARR+Y+GG  +  E E+S FFNDVI+RAL    EGGAV SVY+++E+ FAF+ELK++EL T+ ++LDGI ++   LK+RRP+DYNP LVP   GPIP LNL+ LGI+S TV D   KVFIGG+PY+L+E+Q++ELL AFGPLKSFHLV+D  +  SKGY FCEY+++GVT  AC GL+ M LGD+TLTVR A                                                        Q  A +  NAA    A +  G   + PS AA  T++   +   P   P+RVLV+ NMVT  EL D  EY DI+DDI+ EC  +G V ++I+PR  E    +A+GKV++E+    ++Q AA  L GR F + +V  +Y+ E +F R+E 
Sbjct:  150 RKSNFDVRPPGVTEENAAAYAAQAILQHNMAALSGAVGPASFGPPPSNSTNQNFNTPMAQQTRHARRIYVGGIGEVNETEISAFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKSIELTTACMNLDGIAFRGQPLKVRRPNDYNPGLVPKDLGPIPALNLAALGIVSTTVQDGPGKVFIGGIPYHLTEEQIKELLQAFGPLKSFHLVKDLTTNLSKGYAFCEYMDSGVTDAACIGLNDMKLGDRTLTVRRALS------------------------------------------------------QESAKVIANAAGTVNAGVEMG---LDPSRAAMQTISMAGVHLGPIGSPSRVLVLRNMVTPEELEDEDEYRDIMDDIRSECERYGRVTTIILPRAKEGYGDEALGKVYIEFGDISTSQAAANELHGRGFANRVVSAQYMEEAQFERREL 552          
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A0P1B7G2_PLAHL (Splicing factor U2AF subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7G2_PLAHL)

HSP 1 Score: 319 bits (818), Expect = 4.540e-92
Identity = 209/491 (42.57%), Postives = 280/491 (57.03%), Query Frame = 3
Query:  654 RIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQML---VSRGSGVMQPAA---PQLMAR---------------------LPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGA--GVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
            R+ RRRK+     SNFDV+P   T       +AQ +L   ++  SG + PA+   PQ +                       LPG S QQTRHARRLY+GG  + +E E++ FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+F+GGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ M LGDKTLTVR A  + ++                                                            A A+ A  +  G   G+ PS AA   ++   I ++P   PTRV+V+ NMVT  EL D +EY DIVDDI+ EC   G V S+++PRP +   S AVGKV+VE+    SAQ AA  L GR F +  V VE+++E K+AR+E 
Sbjct:  144 RVVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGPPQNVMTSTGNSSAQSSYAHASVATAYGLPGMS-QQTRHARRLYVGGIGEISEAEITVFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPTDLGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDVNVTDAACLGLNDMRLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNTGLELGLDPSQAAMQAMSLAGITSVPLGPPTRVIVLHNMVTPEELEDEEEYADIVDDIKGECERFGAVPSLLLPRPRDGVLS-AVGKVYVEFSDVQSAQNAAAELHGRGFSNRTVAVEFMDEGKYARREI 568          
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A225WYT2_9STRA (Splicing factor U2AF subunit n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WYT2_9STRA)

HSP 1 Score: 316 bits (809), Expect = 5.340e-91
Identity = 202/489 (41.31%), Postives = 272/489 (55.62%), Query Frame = 3
Query:  657 IERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQPAAPQLMARLPGAS--------------------------NQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGA--GVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
            + RRRK+     SNFDV+P   T       +AQ +L    + +     P      P ++                          +QQTRHARRLY+GG  +  E+E++ FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+FIGGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ M LGDKTLTVR A  + ++                                                            A A+ A  +  G   G+ PS AA   ++   I ++P   P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G V S+++PRP +   S AVGKVFVE+    SAQ AA  L GR F +  V VEY++E K+AR+E 
Sbjct:  131 VVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGAPPTSTPTGNTASTPVYNHSHQASAGFAFAGQSQQTRHARRLYVGGIGEIAEQEITLFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACLGLNDMRLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNTGLEMGLDPSLAAMQAMSMAGIPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVSSLLLPRPRDGVLS-AVGKVFVEFGDVQSAQGAATELHGRGFSNRTVAVEYMDEGKYARREL 554          
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: H3GIY2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIY2_PHYRM)

HSP 1 Score: 320 bits (821), Expect = 8.460e-91
Identity = 210/494 (42.51%), Postives = 276/494 (55.87%), Query Frame = 3
Query:  654 RIERRRKRRALRPSNFDVKP-----DDPTAVALLEASAQQMLVSRGS------GVMQPAAPQLMAR-------------------LPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGA--GVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
            RI RRRK+     SNFDV+P     ++  A A      Q M    GS      G  Q ++P +                       PG S QQTRHARRLY+GG  +  E E++ FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+FIGGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ M LGDKTLTVR A  + ++                                                            A A+ A  +  G   G+ PS AA   ++   I ++P   P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G V S+++PRP +   S AVGKVFVE+    SAQ AA  L GR F +  V VEY++E K+AR+E 
Sbjct:  292 RIVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGPPQTSSPSMSTGNAPPAPMYNHSHQASTGYGFPGQS-QQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVAYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKEVSSNLSKGYGFCEYMDINVTDAACIGLNDMRLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNTGLEMGLDPSRAAMQAMSLAGIPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPS-AVGKVFVEFGEVQSAQSAATELHGRGFSNRTVAVEYMDEGKYARREL 719          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ9_ECTSI1.360e-25487.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZGN1_9STRA2.330e-10144.59Splicing factor U2AF subunit n=1 Tax=Tribonema min... [more]
A0A8K1C271_PYTOL1.300e-9643.68Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XX73_9STRA4.560e-9642.91Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A484DRL9_BRELC1.050e-9543.74Splicing factor U2AF subunit n=1 Tax=Bremia lactuc... [more]
K3WB93_GLOUD1.760e-9343.76Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
F0WWX4_9STRA1.540e-9242.17Splicing factor U2AF subunit n=1 Tax=Albugo laibac... [more]
A0A0P1B7G2_PLAHL4.540e-9242.57Splicing factor U2AF subunit n=1 Tax=Plasmopara ha... [more]
A0A225WYT2_9STRA5.340e-9141.31Splicing factor U2AF subunit n=2 Tax=Phytophthora ... [more]
H3GIY2_PHYRM8.460e-9142.51Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:328421..339576 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LEZ9
PFAMsRRM_1
Model size4183
Max annot lvl2759|Eukaryota
KEGG koko:K12837
KEGG Pathwayko03040,map03040
Hectar predicted targeting categorymitochondrion
Exons11
Evalue2.13e-234
EggNOG OGsKOG0120@1|root,KOG0120@2759|Eukaryota
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-21_006170.1
Descriptionpre-mRNA 3'-splice site binding
Cds size1278
COG categoryJ
BRITEko00000,ko00001,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.100.2prot_P-littoralis_Contig75.100.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig75 330568..336424 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791548.8259628-UTR-P-littoralis_Contig75:328420..3305671680791548.8259628-UTR-P-littoralis_Contig75:328420..330567Pylaiella littoralis U1_48UTRP-littoralis_Contig75 328421..330567 -
1680791548.982757-UTR-P-littoralis_Contig75:336424..3367331680791548.982757-UTR-P-littoralis_Contig75:336424..336733Pylaiella littoralis U1_48UTRP-littoralis_Contig75 336425..336733 -
1680791548.996539-UTR-P-littoralis_Contig75:337947..3381911680791548.996539-UTR-P-littoralis_Contig75:337947..338191Pylaiella littoralis U1_48UTRP-littoralis_Contig75 337948..338191 -
1680791549.0078123-UTR-P-littoralis_Contig75:339371..3395761680791549.0078123-UTR-P-littoralis_Contig75:339371..339576Pylaiella littoralis U1_48UTRP-littoralis_Contig75 339372..339576 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791548.8490827-CDS-P-littoralis_Contig75:330567..3307071680791548.8490827-CDS-P-littoralis_Contig75:330567..330707Pylaiella littoralis U1_48CDSP-littoralis_Contig75 330568..330707 -
1680791548.861226-CDS-P-littoralis_Contig75:331413..3315131680791548.861226-CDS-P-littoralis_Contig75:331413..331513Pylaiella littoralis U1_48CDSP-littoralis_Contig75 331414..331513 -
1680791548.8792405-CDS-P-littoralis_Contig75:332029..3322271680791548.8792405-CDS-P-littoralis_Contig75:332029..332227Pylaiella littoralis U1_48CDSP-littoralis_Contig75 332030..332227 -
1680791548.8947875-CDS-P-littoralis_Contig75:332831..3329911680791548.8947875-CDS-P-littoralis_Contig75:332831..332991Pylaiella littoralis U1_48CDSP-littoralis_Contig75 332832..332991 -
1680791548.9128034-CDS-P-littoralis_Contig75:333584..3337781680791548.9128034-CDS-P-littoralis_Contig75:333584..333778Pylaiella littoralis U1_48CDSP-littoralis_Contig75 333585..333778 -
1680791548.926796-CDS-P-littoralis_Contig75:334514..3346321680791548.926796-CDS-P-littoralis_Contig75:334514..334632Pylaiella littoralis U1_48CDSP-littoralis_Contig75 334515..334632 -
1680791548.9418094-CDS-P-littoralis_Contig75:334956..3350901680791548.9418094-CDS-P-littoralis_Contig75:334956..335090Pylaiella littoralis U1_48CDSP-littoralis_Contig75 334957..335090 -
1680791548.956273-CDS-P-littoralis_Contig75:335519..3357051680791548.956273-CDS-P-littoralis_Contig75:335519..335705Pylaiella littoralis U1_48CDSP-littoralis_Contig75 335520..335705 -
1680791548.9713082-CDS-P-littoralis_Contig75:336376..3364241680791548.9713082-CDS-P-littoralis_Contig75:336376..336424Pylaiella littoralis U1_48CDSP-littoralis_Contig75 336377..336424 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig75.100.2

>prot_P-littoralis_Contig75.100.2 ID=prot_P-littoralis_Contig75.100.2|Name=mRNA_P-littoralis_Contig75.100.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=426bp
MLVSRGSGVMQPAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSN
FFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGI
VYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVF
IGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGV
TAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQHQQLQQQQQLQHQHYAQ
QPQGMPGMQMGQPAPPPAPPTQQEQMQLAQAMAALDPNAAQAAMANLIQG
GAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVD
DIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLA
GRQFGDNIVKVEYVNEEKFARKEFD*
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mRNA from alignment at P-littoralis_Contig75:328421..339576-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig75.100.2 ID=mRNA_P-littoralis_Contig75.100.2|Name=mRNA_P-littoralis_Contig75.100.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11156bp|location=Sequence derived from alignment at P-littoralis_Contig75:328421..339576- (Pylaiella littoralis U1_48)
AGATCACGAAGCGTGAGAAAGGGGATATTGATCAGACAGATTTTGTGTTC CCGCGGTGTTGGTGGTATAAAATAGTACTCTTCCGGCCAAGGCTGCGCAA ACATGGCCGGACGAGGGAGAGGGATGACGCTCCCTGCGTGGATGACCAAG GAGGGCGGGGAGCAGCCAATGGCTCAAGCACCACCAGCCCTCGGTGGACT CAACGGTAAGAGTGCTGGAGAAGATGACCAGCGTGAAATCTGGAACGGGG GATTTATGTGGGTTGGCGCGGAATCCTCGATCTTGGGCTCCCTGGCTCGT GTGGACATAAGTTCGCGGCTCCCACGTGCCCCACAGCAGTCTCTTAACCT GCAGCTTTCCGCACACTGCTAGCCCCCTGGATCTTCGACTAGCAGTGGTT AAGGGATGATGTCAGCTGAACGGAAGAAATTGTTGCCGCGCATTCTGGCG ATGCGTGCTCTTTTGCTCTCTCCACTGGCTGAATTGATTGCATGCCTGGA TCAATGTGCCTGCGATATGATATGTACGATACCCGTACCATTTTAGATAC TTAGTCTACTCCCGGAGTTATCGTATTACACACTTCGTACATCACACAGA TGTTTTGCAGAAGAGGAATAGTTTCACCACAACCACTATTCCAAGGATGA TGCAAACAGCACGTACATTGTAAACACTCAACACATGATGTAACGTGTGT CACGCAAGACGACCACCAAATTGTCTTGTTGAGCCTGATACCCTCAGGGG AGCTGCAACGGTACATTATCTGATGAGTATAGAAACACTGGTAGACGGAT TTTACTCGTTAGTGTTCGTTGGAATATCTGCTCCAGATCCGTCTCTGGAG AGAGGCGAACACATGGATGTTTTTTGTTTTTTCTCACCAAGACATCATTG TGTTCGCCTCTCCCTAGACGAGGATCTAGCAAGATTAGCAACGAACACAG TGAGTAATACACCATAACGATATCTACTGCTGTTGTAGCGTTTGTCATAT AAGACGACCCCCAATCGTTTTGTTGAGCCTGATAGCCTCAGGGGAGCTGC AACGGTACATTATCTCATGTATTTATTCTGTGTGTTCGTTTCCAATCTGC TCCATTATAGATCCTCATTGATTTATTTGCAGGAAAAAAAAACACGTCGC TTTTTCCAGTACATATTGTTCATGTGTAACATTTGTCGGCATCTTAGTTA CCACTTTTACTAGAAAACGACAACAAAGGCAGTTGTCGGCCGGCCCTCTT TCTTCTGTGTGGCAATTTTGTCCACCAACACTCTGTCGTACACCAGCTTC CCCCCTCTACTCTGTAACGGGCCGGACTACCGGTATGATATGCTTCTTGT GATCCTTGCTTCCCCGTGTGACTTAAACGCCGAAGGCAACGGCAACGGCA ACGGCTACCCCATGGCCCCGGCACAGGGCCAATTCGCTGATCCGCCGCAG CAACAGCAACTGGCCTATGCGGCTGTGCCACAGCAGCCGGTCTATGCGGC TGTGCAACAGCAACCCGCGCCTCCAGCACCGGTGCCAGCTCCTGCTCCAG ATCGAGAGAGGGACGGAGGAAGGGAAAGTCGACGGCGAAGGTCGCCTTCT CCCAGGAGGGACAGGGACAGGGACAGCAGGTATGTTGAGTGCGTTCTCGT TGTCATGATACAGCAGCAGTGAAGGGGACCTCAGGGAAGGTGTCAACCGT AATTTTGGATAGGGGTCTTGTGGAATACGGGCGTGTTGGTGTCTACGCAG ATTGTGTTCGAAATCGTGTGTGTCCGGGCTGGGCTGGTTCAATTGGGAGC ACAGGTATGATTTGACTAGACCTTCTTGAAATGAGTCTACGGTATTGCCT TTTTAGAAAGAAGGAAGACGATGAAAATGGAGCTTGACGCAAGTGTACGC AGGCGTTTTGGTCATACGTTGGGGGCAAAGCGTGGTACTGCTACAACCAT TGCCCTGTGACTGTCGTCGTGCCTGGGATACCTCAGCCTATGTAGCTTGC TTGGCAAGCTGCTGCTCTTTGGTGTTGGATACAACACGCTTTCGGGAGTT GATGTCAATCGCGTTCCGAACTGTCGGGTGTCCCGATGCGTTGCTGCTGC TGCTGAAAAGGGGCGCAGTATATATCGCCGGGACGAAGTCGAAAGACAGT TTCGTCCTAGTCATACACACCGACAAATGCGTGTTGGGCGTACTCTATGA TGCTTCCAGTGTAGCCTAAAGTCGCTGCACGTGTACCTGTTGGCGTAGTG TTTCACAGATATTTATATCATGCGGGGAAATTGAAAATTACGATGTCCAG GGTACATGGGTAAGGCAGTGCTTGATCCGTGATGCTCTGCGGCTCTCCTA GGAAGCGTACCTCCTGCAGAATTTTGCTCTTGTCGTTGCAGTGGGCTGTC CACAGGCCGTCCTAATCGCCAGGCGTCCGTGGTGAGCTCAGGATTTGTTC TCAAAACGTGTCGGCAATGTTGCAATCGTGTATTGAAGAACATGTACTGC TTGCTCTACCGTATCGCAATTGGCTTAAGCGTTCACTCATAATCTAGCAG CAGCAGCTGGCTTAAGCGTTTACTCATAATCTAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGGCTTTTGATGTTGGCGCCTTGCATTGACGGCACAGA CTCTAAATTTCCGACAAGCACTGGTAGCTCTCTTGCCATGCGGATGCTCG GCCACACGCCCTTCACACGCCTGGCAAGACGAATCCGGATCGAACCCGAC CACGCCAACATCATCACACTACAAGCATAATCTGTCGATGATGTTCTGTT TGTGTTGCATTGGCTCTCCCCCCTCCCTCCTCTTGGACAATAGGCGCAGG GGTGGTAGCCGCAGCCCTCCCAGAGGCGGTGGCGGCGGCTACGGACGAAG CGGGGGCGGTGGGGGCTACGGCGGTGGGGGCCACGGCGGGGACCGTGGTG GCGGTTACGGGCGCGGAGGACGCGGGGGGGTACGGGTGGTGGGGGGGGCG GCGGGCGATTCGAGAACCCGCGCAACGAAGCGCTTAATGACCGCGACAGG ATCGAGAGGCGTCGCAAGCGGCGCGCGCTGCGGCCTTCTAACTTCGACGT CAAGCCGGACGATCCGACAGCGGTGGCGTTGCTGGAGGCCAGCGCTCAGC AGATGCTCGTGTCGAGGGGGAGCGGGGTAATGCAGCCGGCAGCGCCGCAG GTGTGAAGTGATGCGATGTGACGATATGCCTCTGATTTCGTTTCTCGAGG ATGGTGTAAAGCGTACGAGAGTGCTTTTGCGTGCATCCACGACTGCAACC TTATTTGTAGAGTGTTGCATACTGTTCGAAAGGGACAGGCTGTCATTCTC GACTCACTTAAAAAAAAAATTTGGTCCTTGGAGATCTGCGGGTGGATAAA AATGCTCTACGAGTTTCCGGAAGGATAGCCCTCGTAGAGACCTTGCGCAC CTATATCTTCCTCTATTGTTCTCCGAGTTTTCCGACGACGGAGCCCGTAA TCTTTCTCCCAGAATGCGAATTTCAGGCTACTGTAGGCCCTACAGATCTT TTTTACGATCTTTTTTGTACATCATCCGGTAGCGCTAGCGAAGGTTTACT TTGTGTTTCTTCTCGTTTTCGGAGGACTCTTTCTGCGACCCCGAAATACA GCTGGACGTGAGCAGTAGCAGCAACGGTTTCACCGTCGGAAGCAGCACGT TTCAGCCGCGCCTACATTGGTCCTCTTCGCCGAAACGCTCCTTTCGTTTG GGCCGTGCGGTTGACCTCCGTAGGGCCCCCCCCCCCCCCCCCATCCCTCG TCTGCTATGTATCCCCCTATCTTTTGTAATGATTTTGCGTCCGTCAACAA ATGGGCCCGCGGACTGCCCAGCTGATGGCCCGGCTGCCGGGGGCCAGTAA CCAGCAGACCCGGCACGCCCGGCGGCTGTACATCGGCGGCTGCCCCAAGA CGACGGAGGAAGAGATGTCGAACTTCTTCAATGACGTCATCAACCGGGCC CTGGAGGTCCCCATCGAAGGGGGGGCGGTGGCTTCCGTCTACGTGTCGCA GGAGAAGGTGAGGTGGTTGCTTTGGGTACAGTGCGGTGGGATGAAGCGAA AGGTGGTGGGGCGTTCACCACGATGAGGACTAACGGGGAAATGGTGCCTG CTTTTGGGGAGGTGAAAATGGTGCTTGGAGTGCGCGCCTAGACTACGCAG GACCGTCGTTGTGATTGATTGGAGGGGGAAGTACTGGGAGCGTTTAGGTG GACGTGCCGTTGCCGTGACTCGTCACAAGGAAGAGAGGACCACACCCTTT GCACGTACAGGATGATACGGCCGCTTTGCGGTTGGGCGTTCACACTGAAA GGATGCCGCGCGGAAATTTACGTTTGAGATTTGCGAGCGCACTGCGATCA TCGCACCGTCTGAGGTTCTGGCTGATTTTCTGCTCTCGGCCACGTGCGCT GTCTCAGTCAAACGTTCGCCACCAACCTCTTACCAGGCCTTTGCTTTCCT GGAGCTGAAGACGATGGAGTTGGCGACGTCGGTGCTAGATCTCGACGGAA TCGTGTACAAGGAGACGCAGCTCAAGATGCGCCGCCCCAGCGACTACAAC CCGCAGTTGGTTCCCGCCGCGTGAGTGTATGTACTGGTGGGCTGTTGATA ATACCTTCTCGTTTTTTTTTTATCTGAAATTTGACGAAGACGGTCGACTG CATCGCGTGCACTTCTTTACTCAGCCCTGGGTTTAAGCTGCCGCTGCTGC ACATCATGCGCAGTTTTCATGACCACATTCACACATGTACCAGGCGAGAC ATTCTTCGTCCTTGGCAATTTGGCACGCGATCTCCTGCCACCCTCTGACG CTGTTTTCCTCCCGCTTTGTCCGCGCCTGGTCTTGTGGCGCCCTGTGGCG CAACGAACGGCCCATGTGCAACCACCACCGTCGGTACACACCAGATCTGG CCCGATTCCTAAGCTCAATCTGTCCGTTCTGGGCATCATCTCAAACACTG TTCCCGACAGCGACAACAAGGTTTTCATCGGCGGGCTGCCGTACAACCTT TCTGAGGACCAGGTGCGAACTGTGGCGGCGTCCAAGGGCCGGCAGGCAGG CCCTCCGCAATACTCCGTACATATGGTGGAAACGCCAGCCTTAGCTCCCG AAAGATTCCGTTACTTTTCGAGTGCTCTCACTTTCGGCAATTTGCCATGT GTCGCCGGAGACGCGGATACCTGATCGAATGAGGGTAGGCGTTGGTTTGA GTCCTGGCGTAAGTTTTTTGGTATTCATGTGAGCGTGTAGTCCTGCTGTT GGCAAGATGGAAGGCAAGTAGTTTTGTGGAGTTGCTTCGAGTAGACACAC ATCTCTCAGGGACAAGAGACGTTCAGTAACAAGTGAACATGTCTTGCCTT CTGGCTTTTTTTTTCTTTTTTTCCCACGGTCCGACTCCCTTTACTAATTA TTTCGGTGCCCTTGTCGTGAGTATCCTCGTACGAAAACCATGGGGTTAGT CCTTTCACGGAAAAACGAGTTTTAGTGTTCGAAATCGATGTCGGAAGCAA ACGTTGCGCATACATTATCATGCAAGCGAAGGAGTCGGTGTGTGTGGCTT GCACCCCGCTGCTTCATGAAACGGTGTTGCTTATCCCGTGTATCCAAAAC GATCTGGAAAACGTGAGATTTCGCTCGGCCATGCATTGTTCCCGTTGTTC TGTTGTTGAATTTTGCCATAAATCCCCCCGATCCATTGCTTTGGTACTGC ACGCGGTGCTTTGATGCGCGCATCTCTTGTGGGTGCTTTGATATTCAGGT GCGCGAGCTGCTGAGTGCTTTCGGACCTCTCAAGTCCTTCCACCTCGTGA GGGACCCGGGTTCCCCGACTTCCAAGGGCTACGGATTCTGCGAGTACCTG AACGCGGGGGTCACCGCCATCGCCTGCGAAGGTCTCCACGGGATGACCCT GGGAGATAAGACTCTCACGGTCCGCCCTGCCACAGATCGAGGGTGAGAGA GAGAGAGAGGGAGGCAGTCGATGCTTGATGTCGTAAGGAACCAGGGTATG CTTTTTTCACGTTGCAACTTTTCACGTTTTGTCGCAGCCTCCGGCTGCCG AGTGAAGTGCGTCGCACCAATTGCAAGAGTGGTGATGTATGCGCACCTTG GCCAAATGTACACGTGTTTTATCTCGGGATCGACTGCTTTTTGAATTTTG CGAATGGAGTCGTTTTGGAGCATCGCAAGGTTAAGGCTGTGGAGAGAGAG CCGTTGTGGCCTGCGCTAGAACCTAGCGTACCCGAGTTTCTTTCTCATGA ATCAACCACGTTGGTGGCCTTGTAGGTCATGCGCTGCTTTTTTGGTGCGG CGAGTTGGGGTGCTGTGCTGCGGTGAAACCCTCTGGCGAATGATGGAGCT TAGGCTGTTTATGTCAAGCATTCACCAGCGACCAAAGACTAACCTTGCCC GACGAGTGCTAACCGTGTGGTGTGTCGTCGCGACTTCAGAATGATCGTAT GATCATCCGTTCATTTCTGTGACTGTCCACTGCTGTGCGTGGCCGGTTCA TCCCTGTCAACGTTTTGTGCTTTTGCTGCATGCAGTTCGTCCGGCCACCA ACAGCACCAGCAGCTGCAGCAGCAGCAGCAGCTGCAGCATCAACACTACG CGCAACAACCACAGGGTATGCCCGGCATGCAGATGGGACAGCCTGCGCCC CCCCCCGCGCCGCCTACACAACAGGAGCAAATGCAGCTGGCGCAGGTGGG ACGAAAGCAACGCAGGCTCACGGCTTGTGGTCGCTTGTCGCGGTCCATCA TGCCATACACGATGGGCTTGCTTGTGTTGCGGATTCAGACGATGGCTGTG TTGCTGCCTTGGCCGCAGCTCATTCTGCTGGGGAGTTTATCAATCGACGG CGGCGGAGGAGCCAACTCGGGCGCGTACCGCACCGTAGTTGACGTATCCC TCACGTGACTCGACTCTCTGTCAGTGTCGATAGTGGCAGCAACTGTCCTC GACGAAAAGTTCTAATTTGTGGACGTACCAGTTGATCGCGTCCTCTGGAC GAGAGACACAGGGAGTACCTAATGGCCTTCGAAAAGAGAGACCTCATGAC CCGCCCATCAGCAGACAAACCAATGACGCGACCCTTGTTGGGTGCTTCCG AAACCGGAAACACAGGTTTCTCCCCAACTGTACCGCCCCGATTTTTCCGA GGCTATCGTATGTTTGAGAACACGGGCTTTTGTCAAATGCCACTGTGCTT TGTTTGGTCGTTCTGAACGCATCACCTCACTCAACTTTTCTGTTCCAACT CCACCGCGCTCGTTGTCGCTCCTGGGGGACACGTTAATCTATCCCGCAGG CTATGGCAGCGCTCGATCCTAACGCCGCGCAAGCTGCCATGGCTAATTTG ATCCAGGGCGGCGCTGGCGTCGTTCCGTCGCCAGCAGCTCAGGCGACTGT TGCCGCTAACTTGATTCGCGCTATCCCTCCCACCCGAGTGTTGGTGATGC TCAATATGGTGACTGAAGCAGAGCTCACTGATCCTCAGGAGTACGAGGTG AGCCTTTTCAGCGTTGATCGTTCGGTCTTGTCGATAATAACCCCCATCAC AAAAACGTACTTAACCCCTGTGTGTCCGTGTGTCGGTACAGTATGACTCG CGGGTTGTTGAGGTGTTTTACACGAGTGTATTCTGTTTATGTTGCCTCCC TCCGTCGAAACCTGTCTTGCTCATGGCCTGCCAGTGTTGTGTGGATCTCG AAACATGCTGGATGTCCACACCCCCCCGACAGACCAAAAACAGTGGGTAG TGCGAGGTATCCGTTGACGGTTTGCCGTGTGCGGTGCTTTCCAATGTCAA AAACACTCTCAGCAGGTGTGTGGCTACAACGAGGTCTCACCTTTCACGAG GGAATGGACGTTTTTGTTTGTGTATGCTTCTACTCGACCTCCTCGTTGTT GAACACTTCTTGTACGTCATCACCGTCGTACTATGTTATGACACCCGTTC GTGATATTTCGTGATACTCGCCACTTTTTTTTTTTTGTGACGTCGTGCTT GCTTGTGCTCCAGGACATCGTGGACGACATCCAGCAGGAGTGCTCGTCTC ACGGCACCGTGCTGTCGGTCATCGTGCCGCGTCCGGGAGAAGCAGACGCT AGCCAGGCTGTAGGTGAGTCTCGTCTCTAAAATGCGATTGATGGTGACAT GCGCCGCTGATCCACAGCCCGCGTGAGGTGGTGGACTGGAGTGCATCATA GGAGCTTTCGGGTGAAAGTGCAACCGGTAGCCGAAGCCGTGCTGCACGGA AGAAAGCATCTTGTATGATTGTTGGTCCCACGCGTGCCTGCTTCGCTGTC AGAACCTCGATAAATATACACCCGACATCTTGAGTACGATTTGGCACGCC ATTTGAGTGACGGCTGGAACAACGCTCGTTCCCCGCTTCTCGATCGCCCG TATCTGTGAAAGCCGTATCATCTCAAGTTTGCGTTCGACGGAAGGTCGAT GTACTTTGTCGGTGATCCAGGCGCTTCTCCTGCCTGTCAAAACGGAAGCG GCCACCTCCGCTTTCTTACGCGCACGCTGTCGAGAACACAACATCCCTGC TACCCGCCCCGGTGCACTTTTTTTATTTCACTGTAATGAATGTATGGAAA CTCCAATGCGATGCAATTTTGCGATGCGTTCTACCCGTAGTAGGATTAAT GAGTAGAACAGCATCCATCGGTATCAAAAACCTCCGTAGCCTCAAACACG GTTCTTGTGCTACATACGACGTGAACAGCAACATCAGCAACAGGCAATAT TTTACGATTGAGTATTTCAATGCCAACCCTGTCGCGCGCACGCTAATTTT CATTTCGTTCGCTTGATAGGCAAAGTGTTCGTCGAATACGACACGAGAGA CAGCGCCCAGAAGGCGGCTCTTTCGCTCGCCGGAAGGCAATTCGGCGACA ATATCGTCAAGGTGGAATACGTGAACGAGGAAAAATTCGCGCGCAAGGAG TTCGATTGAAACGAAAGTCACCGTCAACAGGACCGAGGCCGGCACACGGG ACGAAAGAAAGTCGACCGCAGCAGTAGTGTATCTGGGTTTGGATTTGGAC GGGGGGAGGAAGGGGGGGGGCGTGGTAGAGAAGCTCTCCGTCCAAAATTC ACGATACTTTTTTTGGCGCCTTGTTGGGGTATGTGCGTGCGCAAAGGGTT TCTGGATTTTTTTTTATGCGTTTCTTTGCTCGTGAGTTCAGTGCGAGTGC GAGTGCGAGTGCGGGTGCGGTGGCAACGAGTACAACAAGCACGTGTAAGC TTGCATGGGTTCAGGATGCCGTCGGTACGCTATTTTAGCATGTGTGCGGA AGTCGCGATTGAGGCCTTCACTACCACGAACGTCTGTCGAGGACGTATTC CCTCTCTTCACGTTGACGTCGACGAAGATGTCTACTTTTGGTGGTAGCAG ACCCGGGTTCGAATCCCGCGCAACACATTTCCTTGTCCGTCGATGGCGAG GGACCGAAATATATCATTCGAACTTGTGGCACTTCTATATTTCGCAAGAC GTGGCGGAAGTGGTTGGCCCGTATCACAACACTCGGAAAGGACAGAAGGT TGTGAAGAAAATGCGATTTCGACTCGCCGCCAGCCGGTCGGGCTCTGGTT ACCCCCACGTAGGAGCCTTCTTCTTAGGGGGGGTAATGTGGAAGTGACCT TGATACAGGGTACACTACCACGAACGTGTGTCGAGGACGAATTTCCCCAT CTCACAGGTAGATGGTCCACTCAGGGAAAACACCCAACACAAAGTACGGG GCGTAAAAAAAGTTCCAGTCATAAGAGTGCCTCGACACATTTACAAGGCT GCTTCGGTTTGATTTTTCCAGTTTTTTTTCGCCACCGGGCGTTGGCATAG TAAATGGAGCTAATGTAGGGAAAATCGATTTCGGACTATGATAAAGGAAT TGCACTCGCGGGAGGGAGGCAACCGCATCACTGCTGTGGGTTGGTCATGA CCGTTTCATTTCTGCTTCGAGAGAGCGCACCTTCTTTGGTCGACGATATC AATTCGGTGACTGCTGTGGCGTAATGATACCTGGTTGTATTGTTCACTTC ATAAAAACTTCGGAAGTACAAGGGAATATGGCGAAAAGGCCATGTACGTG TTTACGCGTGCAGCATTTAGACGGAGACAGGGGGGTAATTCTGTGATTTT CGCGTCGATGAGAAGAAGGAACTGATGGCTCCTCTAACACCCGACGAAGC TCGGCGAATTCTGCCACAGCTTCTTCTCTGCCTAGCCGTCCAGCAGGGAG CTTGCTGTCGCGCCTGGTTGTCCAGACGCGTGGAGGTGGGGAGAAAGCCA TATGGCATGCTGCCTACGTCGCCGATCCCTCTGAACTCGTTGTCGCCCGC GCTGTTGTGATCTTGCCCTGAAGGACCGAAATATTCTACGTAATATTCTT CGCGTTTTGAAAAACCTATTATTGAGTACCAGTTGCTGCTGTACATGCGA TGCGAACCAGTTTTTTTTGTTTTTTTTACTTTCTTACAAAGGCATCAATG TGTTCGCCTCTCCCTAGACGAGTGTTTTAAAATTTTAAAATTTTACTCTT GCGGTTGATTCAAGGAGAGGGATTTTCGTGGTTTTTGCTGGCTGTTGACT GTCGGAGGGACACTTTTTGTTTTCAATTTTACTCCGTTTTCCGTACGTGG AATACTTGACGTTCGCTGGTTGCAGCCACGCCCCCCATCTAATGGGGCTC GAAACAGCAGTAATACGAGGACGAGAAAACAAACGGATGAGGCAATCTCT TGATTCATTATTGGTGTTTAAATCAAACCATCCAGCTGATGATATTCTTG GTCTTCGACTCCTGGATTGATTGTTGTTAGAGTTTGAATCGACGATATGA TGACAACGAAACCGCCGCAAGCGTGTGTGTGTTGTCATCTCTTTCATTGG ACGCCACTCTACACCTTTCGGGTAGGTAGACGCTCCAACCAGGGTCACAC CGGGAGAAGTCAACACAGGAGTTTTTTTTCTTTTTTTTCTCCACTTCCCT CTGCGGTGCTTGCCTTTTTGGTTTGAGCTTTTATCGCGAGAAAGGGGACA GCAATCCCTTTCCCTCGTCGATGGTACGATCGAATTTTGTTTACTCACGA ATTGAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig75:328421..339576-

>mRNA_P-littoralis_Contig75.100.2 ID=mRNA_P-littoralis_Contig75.100.2|Name=mRNA_P-littoralis_Contig75.100.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1278bp|location=Sequence derived from alignment at P-littoralis_Contig75:328421..339576- (Pylaiella littoralis U1_48)
ATGCTCGTGTCGAGGGGGAGCGGGGTAATGCAGCCGGCAGCGCCGCAGCT
GATGGCCCGGCTGCCGGGGGCCAGTAACCAGCAGACCCGGCACGCCCGGC
GGCTGTACATCGGCGGCTGCCCCAAGACGACGGAGGAAGAGATGTCGAAC
TTCTTCAATGACGTCATCAACCGGGCCCTGGAGGTCCCCATCGAAGGGGG
GGCGGTGGCTTCCGTCTACGTGTCGCAGGAGAAGGCCTTTGCTTTCCTGG
AGCTGAAGACGATGGAGTTGGCGACGTCGGTGCTAGATCTCGACGGAATC
GTGTACAAGGAGACGCAGCTCAAGATGCGCCGCCCCAGCGACTACAACCC
GCAGTTGGTTCCCGCCGCATCTGGCCCGATTCCTAAGCTCAATCTGTCCG
TTCTGGGCATCATCTCAAACACTGTTCCCGACAGCGACAACAAGGTTTTC
ATCGGCGGGCTGCCGTACAACCTTTCTGAGGACCAGGTGCGCGAGCTGCT
GAGTGCTTTCGGACCTCTCAAGTCCTTCCACCTCGTGAGGGACCCGGGTT
CCCCGACTTCCAAGGGCTACGGATTCTGCGAGTACCTGAACGCGGGGGTC
ACCGCCATCGCCTGCGAAGGTCTCCACGGGATGACCCTGGGAGATAAGAC
TCTCACGGTCCGCCCTGCCACAGATCGAGGTTCGTCCGGCCACCAACAGC
ACCAGCAGCTGCAGCAGCAGCAGCAGCTGCAGCATCAACACTACGCGCAA
CAACCACAGGGTATGCCCGGCATGCAGATGGGACAGCCTGCGCCCCCCCC
CGCGCCGCCTACACAACAGGAGCAAATGCAGCTGGCGCAGGCTATGGCAG
CGCTCGATCCTAACGCCGCGCAAGCTGCCATGGCTAATTTGATCCAGGGC
GGCGCTGGCGTCGTTCCGTCGCCAGCAGCTCAGGCGACTGTTGCCGCTAA
CTTGATTCGCGCTATCCCTCCCACCCGAGTGTTGGTGATGCTCAATATGG
TGACTGAAGCAGAGCTCACTGATCCTCAGGAGTACGAGGACATCGTGGAC
GACATCCAGCAGGAGTGCTCGTCTCACGGCACCGTGCTGTCGGTCATCGT
GCCGCGTCCGGGAGAAGCAGACGCTAGCCAGGCTGTAGGCAAAGTGTTCG
TCGAATACGACACGAGAGACAGCGCCCAGAAGGCGGCTCTTTCGCTCGCC
GGAAGGCAATTCGGCGACAATATCGTCAAGGTGGAATACGTGAACGAGGA
AAAATTCGCGCGCAAGGAGTTCGATTGA
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