prot_P-littoralis_Contig75.100.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig75.100.2
Unique Name	prot_P-littoralis_Contig75.100.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	426

Homology

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BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: D8LEZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ9_ECTSI)

HSP 1 Score: 661 bits (1706), Expect = 1.300e-233
Identity = 368/425 (86.59%), Postives = 384/425 (90.35%), Query Frame = 0

Query:    1 MLVSRGSGVMQPAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEFD 425
            MLVSRGSGVMQ AAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMS+FFN+VINRALE PI+GGAVASVYVSQEKAFAFLELKTMELATSVL+LDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIIS+TVPDSDNKVFIGGLPYNL+EDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSG   XXXXXXXXXXXXXXXX                              QAMAALDPNA+QAAMA+L QGGAG VPS AA++ VAANLIRAIPPTRVLVMLNMVTEAEL DPQEYEDIVDDIQQECSSHGTVLS+IVPRPGEADAS+AVGKVFVEYDT+DSAQKAALSLAGRQFG NIVKVEY+NEEKFAR+EF+
Sbjct:  215 MLVSRGSGVMQSAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSSFFNEVINRALEYPIDGGAVASVYVSQEKAFAFLELKTMELATSVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGXXXXXXXXXXXXXXXXXXXMPGMQMGGGQQMGLTAPPTQQEQMQLA---QAMAALDPNASQAAMASLAQGGAGAVPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELRDPQEYEDIVDDIQQECSSHGTVLSIIVPRPGEADASRAVGKVFVEYDTKDSAQKAALSLAGRQFGANIVKVEYLNEEKFARREFE 636

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BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A835ZGN1_9STRA (Splicing factor U2AF subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN1_9STRA)

HSP 1 Score: 332 bits (852), Expect = 7.560e-108
Identity = 188/412 (45.63%), Postives = 248/412 (60.19%), Query Frame = 0

Query:   13 AAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAA-SGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKE 423
            A P  M      + QQTRHARRLY+G  P+  E+E+  FFN+V+ RAL    E   V SVY++Q++ FAF+EL+++ L T+ + LDG++Y +  LK+RRPSDYNP  VP+  +  +  LNLS LGI+SNTVPDS NKVFIGGLPY+L+E+QV+ELLSAFG LK+ HLV+D G+  SKGY FCEY +  VT+IACEGL+GM LGDKTLTVR       S                                                  QAMAALDP A +A                  ++  AA ++R + PTRVLV++NMV E +L D QEY DI++D++ EC  +G + +VI+PRPGE      VGKVF+EY     AQ AA++LAGRQF   IVK +Y +E +FA ++
Sbjct:   40 AVPLPMGGGAAPTMQQTRHARRLYVGNIPRVPEQEVQRFFNEVLTRALGGRQESDPVVSVYLNQDRGFAFVELRSVALTTAAIQLDGLMYGDISLKIRRPSDYNPSAVPSEFTNEVVHLNLSALGIVSNTVPDSPNKVFIGGLPYHLTEEQVKELLSAFGALKALHLVKDAGATNSKGYAFCEYQDPAVTSIACEGLNGMALGDKTLTVRKVRGHALS-------------------------------------------VAALMLAQAMAALDPTAHKAVT----------------ESAEAATVVRTMAPTRVLVLMNMVGEEDLKDDQEYTDILEDVRDECKQYGELKTVIIPRPGETG----VGKVFLEYAEVQQAQAAAMALAGRQFASKIVKAQYHDESRFAARD 388

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BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A5D6XX73_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX73_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.220e-104
Identity = 192/412 (46.60%), Postives = 249/412 (60.44%), Query Frame = 0

Query:   23 GASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPA-----TDR-----GSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 424
            G ++QQTRHARRLY+GG  +  E+E++ FFNDVI+RAL   +EGGAV SVY+++E+ FAF+EL+++EL T+ ++LDG+ ++   LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+FIGGLPY+L+E+Q++ELL AFGPL+SFHLV++  S  SKGYGFCEYL+   T  AC GL+ M LGDKTLTVR A     T +     GSS H                                                         A+QAA+  L   G G    P+              P+RV+V+LNMVT  EL D  EY DIVDDI+ EC   G V+S+++PRP +   S AVGKVFVEYD   SAQ AA  L GR F + IV VEY++E K+AR+EF
Sbjct:  267 GGNSQQTRHARRLYVGGLGEVGEQEITEFFNDVIDRALGERMEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVAFRGQPLKVRRPNDYNPATVPTELGPIPQLNLAALGIVSTTVCDGPGKIFIGGLPYHLNEEQIKELLQAFGPLRSFHLVKELSSNMSKGYGFCEYLDPNSTDAACLGLNEMKLGDKTLTVRRAMTPEYTSKAAGGGGSSSHPNPGMEL--------------------------------------------------ASQAALQALSMAGLGAPSGPSGA------------PSRVVVLLNMVTPEELDDEDEYADIVDDIKSECERFGRVISIVLPRPRDGFYS-AVGKVFVEYDAVPSAQAAAAELHGRGFSNRIVAVEYMDEHKYARREF 615

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BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A8K1C271_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C271_PYTOL)

HSP 1 Score: 325 bits (832), Expect = 1.250e-102
Identity = 182/401 (45.39%), Postives = 248/401 (61.85%), Query Frame = 0

Query:   24 ASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 424
            AS+QQTRHARR+Y+GG  +  E+E++ FFNDVI+RAL    EGGAV SVY+++E+ FAF+ELKT+EL T+ ++LDG+ ++   LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV DS +K+F+GG+PY+L++DQV+ELL AFGPLKSFHLV++  +  SKGYGFCEYL+  VT  AC GL+ M LGDKTLTVR A  + ++                                                       LDP  A     ++   G G+  +P               P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G VLS+++PRP +   + AVGKVFVE+    SAQ A+  L GR F +  V VE+++E+K+AR++F
Sbjct:  209 ASHQQTRHARRIYVGGIGEVAEQEITEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKTIELTTACMNLDGVSFRGQPLKIRRPNDYNPSNVPKDLGPIPQLNLAALGIVSTTVQDSPHKIFVGGIPYHLNDDQVKELLQAFGPLKSFHLVKELNTNMSKGYGFCEYLDPNVTDAACIGLNDMKLGDKTLTVRRAMSQENA--------------------------------------KAVASAAGSVNSGLSMGLDPTTAALQTISMAGFGLGIPSAPLGN------------PSRVIVLLNMVTADELEDDEEYNDILDDIKTECERFGPVLSLVIPRPRDGYHT-AVGKVFVEFADIASAQGASQELHGRGFANRTVSVEFMDEQKYARRDF 558

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BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: K3WB93_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB93_GLOUD)

HSP 1 Score: 323 bits (827), Expect = 2.210e-101
Identity = 195/428 (45.56%), Postives = 254/428 (59.35%), Query Frame = 0

Query:   12 PAAPQLMARLPGA--------SNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANL----IRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 424
            P AP   A +PG         ++QQTRHARR+Y+GG     E E+S FFNDVI+RAL    EGGAV SVY+++E+ FAF+EL+++EL T+ ++LDG+ ++   LK+RRP+DYNP  VP   GPIP LNL+ LGI+S TV D   KVFIGGLPY+L+++QV+ELL AFGPLKSFHLV++  S  SKGYGFCEY++  VT  AC GL+ M LGDKTLTVR A  + ++                                                            A A+ A  +  G  +  +P+  A  A NL    I ++P   PTRV+V+LNMVT  EL D +EY DIVDDI+ EC   G V S+++PRP +   S AVGKVFVEY    SAQ AA  L GR F +  V VEY++E K+AR++F
Sbjct:  233 PIAPPAHAIVPGVVASHTFGGNSQQTRHARRIYVGGIGDVNEAEISEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVSFRGQPLKIRRPNDYNPSTVPKDLGPIPTLNLAALGIVSTTVSDGPGKVFIGGLPYHLNDEQVKELLQAFGPLKSFHLVKELNSNLSKGYGFCEYVDINVTDSACLGLNDMKLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNSGLEMGLNPSHAALQAMNLAGFGIPSMPLGTPTRVIVLLNMVTPEELEDEEEYADIVDDIKGECERFGRVNSIVLPRPRDGFYS-AVGKVFVEYGDVPSAQAAAAELHGRGFSNRTVAVEYMDEHKYARRDF 600

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BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A484DRL9_BRELC (Splicing factor U2AF subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRL9_BRELC)

HSP 1 Score: 320 bits (821), Expect = 4.800e-101
Identity = 188/402 (46.77%), Postives = 244/402 (60.70%), Query Frame = 0

Query:   26 NQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQG-GAGVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKE 423
            +QQTRHARRLY+GG  +  E E++ FFNDVI+RALE    GG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+F+GGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEYL+  VT  AC GL+ M LGDKTLTVR                                                          +AM+  +  A   A  N+  G   G+ PS AA   +    I  +P   PTRV+V+LNMVT  EL D  EY DIVDDI+ EC   G V+S+++PRP +   S AVGKVF+E+    SAQ AA  L GR F + IV VE++ EE +AR+E
Sbjct:  210 SQQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALEEKQPGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYHGQPLKIRRPNDYNPVTVPTELGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYLDVSVTDAACMGLNDMRLGDKTLTVR----------------------------------------------------------RAMSQENAKAVANAAGNVNTGLEMGLDPSQAAMQAMTLAGITGVPLGVPTRVIVLLNMVTRDELEDDDEYADIVDDIKGECERFGRVVSLLLPRPRDGILS-AVGKVFIEFQDVASAQGAATELHGRGFSNRIVSVEFMPEELYARRE 552

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BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A0P1B7G2_PLAHL (Splicing factor U2AF subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7G2_PLAHL)

HSP 1 Score: 318 bits (815), Expect = 5.740e-100
Identity = 188/408 (46.08%), Postives = 249/408 (61.03%), Query Frame = 0

Query:   21 LPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGA--GVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKE 423
            LPG S QQTRHARRLY+GG  + +E E++ FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+F+GGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ M LGDKTLTVR A  + ++                                                            A A+ A  +  G   G+ PS AA   ++   I ++P   PTRV+V+ NMVT  EL D +EY DIVDDI+ EC   G V S+++PRP +   S AVGKV+VE+    SAQ AA  L GR F +  V VE+++E K+AR+E
Sbjct:  221 LPGMS-QQTRHARRLYVGGIGEISEAEITVFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPTDLGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDVNVTDAACLGLNDMRLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNTGLELGLDPSQAAMQAMSLAGITSVPLGPPTRVIVLHNMVTPEELEDEEEYADIVDDIKGECERFGAVPSLLLPRPRDGVLS-AVGKVYVEFSDVQSAQNAAAELHGRGFSNRTVAVEFMDEGKYARRE 567

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BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A225WYT2_9STRA (Splicing factor U2AF subunit n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WYT2_9STRA)

HSP 1 Score: 317 bits (811), Expect = 1.540e-99
Identity = 186/403 (46.15%), Postives = 247/403 (61.29%), Query Frame = 0

Query:   26 NQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGA--GVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKE 423
            +QQTRHARRLY+GG  +  E+E++ FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+FIGGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ M LGDKTLTVR A  + ++                                                            A A+ A  +  G   G+ PS AA   ++   I ++P   P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G V S+++PRP +   S AVGKVFVE+    SAQ AA  L GR F +  V VEY++E K+AR+E
Sbjct:  211 SQQTRHARRLYVGGIGEIAEQEITLFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACLGLNDMRLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNTGLEMGLDPSLAAMQAMSMAGIPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVSSLLLPRPRDGVLS-AVGKVFVEFGDVQSAQGAATELHGRGFSNRTVAVEYMDEGKYARRE 553

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BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A3R7NK17_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NK17_9STRA)

HSP 1 Score: 319 bits (818), Expect = 3.780e-99
Identity = 186/403 (46.15%), Postives = 246/403 (61.04%), Query Frame = 0

Query:   26 NQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGA--GVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKE 423
            +QQTRHARRLY+GG  +  E E++ FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+FIGGLPYNL+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY +  VT  AC GL+ M LGDKTLTVR A  + ++                                                            A A+ A  +  G   G+ PS AA   ++   I ++P   P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   GTV S+++PRP +   S AVGKVF+E+    SAQ AA  L GR F +  V VE+++E K+AR+E
Sbjct:  337 SQQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVAYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYNLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYTDINVTDAACLGLNDMRLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNTGLEMGLDPSRAAMQAMSLAGIPSVPLGPPSRVIVLLNMVTPEELDDEEEYADILDDIKGECERFGTVASLLLPRPRDGVPS-AVGKVFIEFGDVQSAQSAATELHGRGFSNRTVAVEFMDEGKYARRE 679

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BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: H3GIY2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIY2_PHYRM)

HSP 1 Score: 319 bits (818), Expect = 9.660e-99
Identity = 189/407 (46.44%), Postives = 248/407 (60.93%), Query Frame = 0

Query:   22 PGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGA--GVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKE 423
            PG S QQTRHARRLY+GG  +  E E++ FFNDVI+RAL    EGG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y    LK+RRP+DYNP  VP   GPIP+LNL+ LGI+S TV D   K+FIGGLPY+L+E+QV+ELL AFGPL+SFHLV++  S  SKGYGFCEY++  VT  AC GL+ M LGDKTLTVR A  + ++                                                            A A+ A  +  G   G+ PS AA   ++   I ++P   P+RV+V+LNMVT  EL D +EY DI+DDI+ EC   G V S+++PRP +   S AVGKVFVE+    SAQ AA  L GR F +  V VEY++E K+AR+E
Sbjct:  373 PGQS-QQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVAYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKEVSSNLSKGYGFCEYMDINVTDAACIGLNDMRLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNTGLEMGLDPSRAAMQAMSLAGIPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPS-AVGKVFVEFGEVQSAQSAATELHGRGFSNRTVAVEYMDEGKYARRE 718

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LEZ9_ECTSI	1.300e-233	86.59	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835ZGN1_9STRA	7.560e-108	45.63	Splicing factor U2AF subunit n=1 Tax=Tribonema min...	[more]
A0A5D6XX73_9STRA	1.220e-104	46.60	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A8K1C271_PYTOL	1.250e-102	45.39	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3WB93_GLOUD	2.210e-101	45.56	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A484DRL9_BRELC	4.800e-101	46.77	Splicing factor U2AF subunit n=1 Tax=Bremia lactuc...	[more]
A0A0P1B7G2_PLAHL	5.740e-100	46.08	Splicing factor U2AF subunit n=1 Tax=Plasmopara ha...	[more]
A0A225WYT2_9STRA	1.540e-99	46.15	Splicing factor U2AF subunit n=2 Tax=Phytophthora ...	[more]
A0A3R7NK17_9STRA	3.780e-99	46.15	Uncharacterized protein n=4 Tax=Phytophthora kerno...	[more]
H3GIY2_PHYRM	9.660e-99	46.44	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 34..110 e-value: 0.18 score: 13.2 coord: 326..412 e-value: 0.066 score: 17.1 coord: 148..221 e-value: 2.3E-19 score: 80.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 149..218 e-value: 5.7E-14 score: 51.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 33..114 score: 10.905961
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 147..225 score: 15.203922
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 326..416 score: 10.274912
IPR006529	U2 snRNP auxilliary factor, large subunit, splicing factor	TIGRFAM	TIGR01642	TIGR01642	coord: 21..424 e-value: 1.8E-97 score: 324.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 33..220 e-value: 9.3E-41 score: 141.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 125..198 e-value: 9.3E-41 score: 141.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 321..425 e-value: 2.0E-32 score: 113.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..257
None	No IPR available	PANTHER	PTHR23139	RNA-BINDING PROTEIN	coord: 11..420
None	No IPR available	CDD	cd12231	RRM2_U2AF65	coord: 147..223 e-value: 1.56656E-39 score: 134.666
None	No IPR available	CDD	cd12232	RRM3_U2AF65	coord: 325..412 e-value: 2.14715E-35 score: 123.82
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 33..116
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 143..417

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig75	contig	P-littoralis_Contig75:330568..336424 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig75.100.2	mRNA_P-littoralis_Contig75.100.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig75 328421..339576 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig75.100.2 ID=prot_P-littoralis_Contig75.100.2|Name=mRNA_P-littoralis_Contig75.100.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=426bp
MLVSRGSGVMQPAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSN
FFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGI
VYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVF
IGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGV
TAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQHQQLQQQQQLQHQHYAQ
QPQGMPGMQMGQPAPPPAPPTQQEQMQLAQAMAALDPNAAQAAMANLIQG
GAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVD
DIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLA
GRQFGDNIVKVEYVNEEKFARKEFD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR006529	U2AF_lg
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf