mRNA_P-littoralis_Contig75.100.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: D8LEZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ9_ECTSI) HSP 1 Score: 751 bits (1938), Expect = 1.360e-254 Identity = 417/474 (87.97%), Postives = 433/474 (91.35%), Query Frame = 3
Query: 612 RFENPRNEALNDRDRIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQPAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEFD 2033
RFENPRNEALNDRDRIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQ AAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMS+FFN+VINRALE PI+GGAVASVYVSQEKAFAFLELKTMELATSVL+LDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIIS+TVPDSDNKVFIGGLPYNL+EDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSG XXXXXXXXXXXXXXXX QAMAALDPNA+QAAMA+L QGGAG VPS AA++ VAANLIRAIPPTRVLVMLNMVTEAEL DPQEYEDIVDDIQQECSSHGTVLS+IVPRPGEADAS+AVGKVFVEYDT+DSAQKAALSLAGRQFG NIVKVEY+NEEKFAR+EF+
Sbjct: 166 RFENPRNEALNDRDRIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQSAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSSFFNEVINRALEYPIDGGAVASVYVSQEKAFAFLELKTMELATSVLELDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISSTVPDSDNKVFIGGLPYNLTEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGXXXXXXXXXXXXXXXXXXXMPGMQMGGGQQMGLTAPPTQQEQMQLA---QAMAALDPNASQAAMASLAQGGAGAVPSAAAESAVAANLIRAIPPTRVLVMLNMVTEAELRDPQEYEDIVDDIQQECSSHGTVLSIIVPRPGEADASRAVGKVFVEYDTKDSAQKAALSLAGRQFGANIVKVEYLNEEKFARREFE 636
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A835ZGN1_9STRA (Splicing factor U2AF subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN1_9STRA) HSP 1 Score: 338 bits (868), Expect = 2.330e-101 Identity = 202/453 (44.59%), Postives = 267/453 (58.94%), Query Frame = 3
Query: 687 RPSNFDVKP---DDPTAVALL-EASAQQMLVSRGSGVMQPAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAA-SGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
R SNFDV P D+ TA + +A QQ L + + A P M + QQTRHARRLY+G P+ E+E+ FFN+V+ RAL E V SVY++Q++ FAF+EL+++ L T+ + LDG++Y + LK+RRPSDYNP VP+ + + LNLS LGI+SNTVPDS NKVFIGGLPY+L+E+QV+ELLSAFG LK+ HLV+D G+ SKGY FCEY + VT+IACEGL+GM LGDKTLTVR S QAMAALDP A +A ++ AA ++R + PTRVLV++NMV E +L D QEY DI++D++ EC +G + +VI+PRPGE VGKVF+EY AQ AA++LAGRQF IVK +Y +E +FA ++
Sbjct: 3 RGSNFDVLPEGMDEATANQIAAQAFLQQTLPAAAAAA---AVPLPMGGGAAPTMQQTRHARRLYVGNIPRVPEQEVQRFFNEVLTRALGGRQESDPVVSVYLNQDRGFAFVELRSVALTTAAIQLDGLMYGDISLKIRRPSDYNPSAVPSEFTNEVVHLNLSALGIVSNTVPDSPNKVFIGGLPYHLTEEQVKELLSAFGALKALHLVKDAGATNSKGYAFCEYQDPAVTSIACEGLNGMALGDKTLTVRKVRGHALS-------------------------------------------VAALMLAQAMAALDPTAHKAVT----------------ESAEAATVVRTMAPTRVLVLMNMVGEEDLKDDQEYTDILEDVRDECKQYGELKTVIIPRPGETG----VGKVFLEYAEVQQAQAAAMALAGRQFASKIVKAQYHDESRFAARDL 389
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A8K1C271_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C271_PYTOL) HSP 1 Score: 332 bits (850), Expect = 1.300e-96 Identity = 197/451 (43.68%), Postives = 270/451 (59.87%), Query Frame = 3
Query: 693 SNFDVKPDDPTAVALLEASAQQML---VSRGSGVMQPAA--PQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
SNFDV+P T +AQ +L ++ SG + PA+ P AS+QQTRHARR+Y+GG + E+E++ FFNDVI+RAL EGGAV SVY+++E+ FAF+ELKT+EL T+ ++LDG+ ++ LK+RRP+DYNP VP GPIP+LNL+ LGI+S TV DS +K+F+GG+PY+L++DQV+ELL AFGPLKSFHLV++ + SKGYGFCEYL+ VT AC GL+ M LGDKTLTVR A + ++ LDP A ++ G G+ +P P+RV+V+LNMVT EL D +EY DI+DDI+ EC G VLS+++PRP + + AVGKVFVE+ SAQ A+ L GR F + V VE+++E+K+AR++F
Sbjct: 159 SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGAVGPASFGPPPANGTYSASHQQTRHARRIYVGGIGEVAEQEITEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKTIELTTACMNLDGVSFRGQPLKIRRPNDYNPSNVPKDLGPIPQLNLAALGIVSTTVQDSPHKIFVGGIPYHLNDDQVKELLQAFGPLKSFHLVKELNTNMSKGYGFCEYLDPNVTDAACIGLNDMKLGDKTLTVRRAMSQENA--------------------------------------KAVASAAGSVNSGLSMGLDPTTAALQTISMAGFGLGIPSAPLGN------------PSRVIVLLNMVTADELEDDEEYNDILDDIKTECERFGPVLSLVIPRPRDGYHT-AVGKVFVEFADIASAQGASQELHGRGFANRTVSVEFMDEQKYARRDF 558
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A5D6XX73_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX73_9STRA) HSP 1 Score: 332 bits (851), Expect = 4.560e-96 Identity = 212/494 (42.91%), Postives = 279/494 (56.48%), Query Frame = 3
Query: 657 IERRRKRRALRPSNFDVKP----DDPTAVALLEASAQQMLVSRGSGV------------MQPAAPQ------LMARLP----GASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPA-----TDR-----GSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIPPTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
I RRRK+ S FDV+P ++ A +A QQ + + G + P+AP + LP G ++QQTRHARRLY+GG + E+E++ FFNDVI+RAL +EGGAV SVY+++E+ FAF+EL+++EL T+ ++LDG+ ++ LK+RRP+DYNP VP GPIP+LNL+ LGI+S TV D K+FIGGLPY+L+E+Q++ELL AFGPL+SFHLV++ S SKGYGFCEYL+ T AC GL+ M LGDKTLTVR A T + GSS H A+QAA+ L G G P+ P+RV+V+LNMVT EL D EY DIVDDI+ EC G V+S+++PRP + S AVGKVFVEYD SAQ AA L GR F + IV VEY++E K+AR+EF
Sbjct: 190 IVRRRKK-----SYFDVRPPGVTEENAAAYAAQAILQQNMATHAGGAGAVAFNPPAAVAVAPSAPAHSHSALVPGLLPPQSFGGNSQQTRHARRLYVGGLGEVGEQEITEFFNDVIDRALGERMEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVAFRGQPLKVRRPNDYNPATVPTELGPIPQLNLAALGIVSTTVCDGPGKIFIGGLPYHLNEEQIKELLQAFGPLRSFHLVKELSSNMSKGYGFCEYLDPNSTDAACLGLNEMKLGDKTLTVRRAMTPEYTSKAAGGGGSSSHPNPGMEL--------------------------------------------------ASQAALQALSMAGLGAPSGPSGA------------PSRVVVLLNMVTPEELDDEDEYADIVDDIKSECERFGRVISIVLPRPRDGFYS-AVGKVFVEYDAVPSAQAAAAELHGRGFSNRIVAVEYMDEHKYARREF 615
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A484DRL9_BRELC (Splicing factor U2AF subunit n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRL9_BRELC) HSP 1 Score: 329 bits (843), Expect = 1.050e-95 Identity = 213/487 (43.74%), Postives = 278/487 (57.08%), Query Frame = 3
Query: 654 RIERRRKRRALRPSNFDVKP----DDPTAVALLEASAQQMLVSRGSGVMQPAA-------PQLMARLPGASN-------------QQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQG-GAGVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
RI RRRK+ SNFDV+P D+ A +A QQ + + SG + PA+ P + PG S+ QQTRHARRLY+GG + E E++ FFNDVI+RALE GG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y LK+RRP+DYNP VP GPIP+LNL+ LGI+S TV D K+F+GGLPY+L+E+QV+ELL AFGPL+SFHLV++ S SKGYGFCEYL+ VT AC GL+ M LGDKTLTVR +AM+ + A A N+ G G+ PS AA + I +P PTRV+V+LNMVT EL D EY DIVDDI+ EC G V+S+++PRP + S AVGKVF+E+ SAQ AA L GR F + IV VE++ EE +AR+E
Sbjct: 132 RIIRRRKK-----SNFDVRPPGVTDENAAAYAAQAILQQNMAAL-SGAVGPASFGPPQISPSSTSTTPGYSHASXXXXXXFAGMSQQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALEEKQPGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYHGQPLKIRRPNDYNPVTVPTELGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYLDVSVTDAACMGLNDMRLGDKTLTVR----------------------------------------------------------RAMSQENAKAVANAAGNVNTGLEMGLDPSQAAMQAMTLAGITGVPLGVPTRVIVLLNMVTRDELEDDDEYADIVDDIKGECERFGRVVSLLLPRPRDGILS-AVGKVFIEFQDVASAQGAATELHGRGFSNRIVSVEFMPEELYARREI 553
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: K3WB93_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WB93_GLOUD) HSP 1 Score: 324 bits (831), Expect = 1.760e-93 Identity = 207/473 (43.76%), Postives = 272/473 (57.51%), Query Frame = 3
Query: 693 SNFDVKPDDPTAVALLEASAQQML---VSRGSGVMQPA---------APQLMARLPGA--------SNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANL----IRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
S FDV+P T +AQ +L ++ SG + PA AP A +PG ++QQTRHARR+Y+GG E E+S FFNDVI+RAL EGGAV SVY+++E+ FAF+EL+++EL T+ ++LDG+ ++ LK+RRP+DYNP VP GPIP LNL+ LGI+S TV D KVFIGGLPY+L+++QV+ELL AFGPLKSFHLV++ S SKGYGFCEY++ VT AC GL+ M LGDKTLTVR A + ++ A A+ A + G + +P+ A A NL I ++P PTRV+V+LNMVT EL D +EY DIVDDI+ EC G V S+++PRP + S AVGKVFVEY SAQ AA L GR F + V VEY++E K+AR++F
Sbjct: 188 SYFDVRPPGVTEENAAAYAAQAILQQNMAALSGAVGPASFGPPPPPIAPPAHAIVPGVVASHTFGGNSQQTRHARRIYVGGIGDVNEAEISEFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELRSIELTTACMNLDGVSFRGQPLKIRRPNDYNPSTVPKDLGPIPTLNLAALGIVSTTVSDGPGKVFIGGLPYHLNDEQVKELLQAFGPLKSFHLVKELNSNLSKGYGFCEYVDINVTDSACLGLNDMKLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNSGLEMGLNPSHAALQAMNLAGFGIPSMPLGTPTRVIVLLNMVTPEELEDEEEYADIVDDIKGECERFGRVNSIVLPRPRDGFYS-AVGKVFVEYGDVPSAQAAAAELHGRGFSNRTVAVEYMDEHKYARRDF 600
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: F0WWX4_9STRA (Splicing factor U2AF subunit n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WWX4_9STRA) HSP 1 Score: 320 bits (820), Expect = 1.540e-92 Identity = 194/460 (42.17%), Postives = 260/460 (56.52%), Query Frame = 3
Query: 687 RPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQPAAPQLMARLPGASN---------QQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGAGVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
R SNFDV+P T +AQ +L + + P P S QQTRHARR+Y+GG + E E+S FFNDVI+RAL EGGAV SVY+++E+ FAF+ELK++EL T+ ++LDGI ++ LK+RRP+DYNP LVP GPIP LNL+ LGI+S TV D KVFIGG+PY+L+E+Q++ELL AFGPLKSFHLV+D + SKGY FCEY+++GVT AC GL+ M LGD+TLTVR A Q A + NAA A + G + PS AA T++ + P P+RVLV+ NMVT EL D EY DI+DDI+ EC +G V ++I+PR E +A+GKV++E+ ++Q AA L GR F + +V +Y+ E +F R+E
Sbjct: 150 RKSNFDVRPPGVTEENAAAYAAQAILQHNMAALSGAVGPASFGPPPSNSTNQNFNTPMAQQTRHARRIYVGGIGEVNETEISAFFNDVIDRALGERQEGGAVVSVYINRERHFAFVELKSIELTTACMNLDGIAFRGQPLKVRRPNDYNPGLVPKDLGPIPALNLAALGIVSTTVQDGPGKVFIGGIPYHLTEEQIKELLQAFGPLKSFHLVKDLTTNLSKGYAFCEYMDSGVTDAACIGLNDMKLGDRTLTVRRALS------------------------------------------------------QESAKVIANAAGTVNAGVEMG---LDPSRAAMQTISMAGVHLGPIGSPSRVLVLRNMVTPEELEDEDEYRDIMDDIRSECERYGRVTTIILPRAKEGYGDEALGKVYIEFGDISTSQAAANELHGRGFANRVVSAQYMEEAQFERREL 552
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A0P1B7G2_PLAHL (Splicing factor U2AF subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7G2_PLAHL) HSP 1 Score: 319 bits (818), Expect = 4.540e-92 Identity = 209/491 (42.57%), Postives = 280/491 (57.03%), Query Frame = 3
Query: 654 RIERRRKRRALRPSNFDVKPDDPTAVALLEASAQQML---VSRGSGVMQPAA---PQLMAR---------------------LPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGA--GVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
R+ RRRK+ SNFDV+P T +AQ +L ++ SG + PA+ PQ + LPG S QQTRHARRLY+GG + +E E++ FFNDVI+RAL EGG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y LK+RRP+DYNP VP GPIP+LNL+ LGI+S TV D K+F+GGLPY+L+E+QV+ELL AFGPL+SFHLV++ S SKGYGFCEY++ VT AC GL+ M LGDKTLTVR A + ++ A A+ A + G G+ PS AA ++ I ++P PTRV+V+ NMVT EL D +EY DIVDDI+ EC G V S+++PRP + S AVGKV+VE+ SAQ AA L GR F + V VE+++E K+AR+E
Sbjct: 144 RVVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGPPQNVMTSTGNSSAQSSYAHASVATAYGLPGMS-QQTRHARRLYVGGIGEISEAEITVFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPTDLGPIPQLNLAALGIVSTTVSDGPGKIFVGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDVNVTDAACLGLNDMRLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNTGLELGLDPSQAAMQAMSLAGITSVPLGPPTRVIVLHNMVTPEELEDEEEYADIVDDIKGECERFGAVPSLLLPRPRDGVLS-AVGKVYVEFSDVQSAQNAAAELHGRGFSNRTVAVEFMDEGKYARREI 568
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: A0A225WYT2_9STRA (Splicing factor U2AF subunit n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WYT2_9STRA) HSP 1 Score: 316 bits (809), Expect = 5.340e-91 Identity = 202/489 (41.31%), Postives = 272/489 (55.62%), Query Frame = 3
Query: 657 IERRRKRRALRPSNFDVKPDDPTAVALLEASAQQMLVSRGSGVMQPAAPQLMARLPGAS--------------------------NQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGA--GVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
+ RRRK+ SNFDV+P T +AQ +L + + P P ++ +QQTRHARRLY+GG + E+E++ FFNDVI+RAL EGG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y LK+RRP+DYNP VP GPIP+LNL+ LGI+S TV D K+FIGGLPY+L+E+QV+ELL AFGPL+SFHLV++ S SKGYGFCEY++ VT AC GL+ M LGDKTLTVR A + ++ A A+ A + G G+ PS AA ++ I ++P P+RV+V+LNMVT EL D +EY DI+DDI+ EC G V S+++PRP + S AVGKVFVE+ SAQ AA L GR F + V VEY++E K+AR+E
Sbjct: 131 VVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGAPPTSTPTGNTASTPVYNHSHQASAGFAFAGQSQQTRHARRLYVGGIGEIAEQEITLFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVSYNGQPLKIRRPNDYNPGTVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACLGLNDMRLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNTGLEMGLDPSLAAMQAMSMAGIPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVSSLLLPRPRDGVLS-AVGKVFVEFGDVQSAQGAATELHGRGFSNRTVAVEYMDEGKYARREL 554
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Match: H3GIY2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIY2_PHYRM) HSP 1 Score: 320 bits (821), Expect = 8.460e-91 Identity = 210/494 (42.51%), Postives = 276/494 (55.87%), Query Frame = 3
Query: 654 RIERRRKRRALRPSNFDVKP-----DDPTAVALLEASAQQMLVSRGS------GVMQPAAPQLMAR-------------------LPGASNQQTRHARRLYIGGCPKTTEEEMSNFFNDVINRALEVPIEGGAVASVYVSQEKAFAFLELKTMELATSVLDLDGIVYKETQLKMRRPSDYNPQLVPAASGPIPKLNLSVLGIISNTVPDSDNKVFIGGLPYNLSEDQVRELLSAFGPLKSFHLVRDPGSPTSKGYGFCEYLNAGVTAIACEGLHGMTLGDKTLTVRPATDRGSSGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMAALDPNAAQAAMANLIQGGA--GVVPSPAAQATVAANLIRAIP---PTRVLVMLNMVTEAELTDPQEYEDIVDDIQQECSSHGTVLSVIVPRPGEADASQAVGKVFVEYDTRDSAQKAALSLAGRQFGDNIVKVEYVNEEKFARKEF 2030
RI RRRK+ SNFDV+P ++ A A Q M GS G Q ++P + PG S QQTRHARRLY+GG + E E++ FFNDVI+RAL EGG+V SVY+++E+ FAF+EL+T+EL T+ ++LDG+ Y LK+RRP+DYNP VP GPIP+LNL+ LGI+S TV D K+FIGGLPY+L+E+QV+ELL AFGPL+SFHLV++ S SKGYGFCEY++ VT AC GL+ M LGDKTLTVR A + ++ A A+ A + G G+ PS AA ++ I ++P P+RV+V+LNMVT EL D +EY DI+DDI+ EC G V S+++PRP + S AVGKVFVE+ SAQ AA L GR F + V VEY++E K+AR+E
Sbjct: 292 RIVRRRKK-----SNFDVRPPGVTEENAAAYAAQAILQQNMAALSGSVGPASFGPPQTSSPSMSTGNAPPAPMYNHSHQASTGYGFPGQS-QQTRHARRLYVGGIGEIAEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRTIELTTACMNLDGVAYNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEEQVKELLQAFGPLRSFHLVKEVSSNLSKGYGFCEYMDINVTDAACIGLNDMRLGDKTLTVRRAMSQENA-----------------------------------------------------------KAVASAAGTVNTGLEMGLDPSRAAMQAMSLAGIPSVPLGTPSRVIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGIPS-AVGKVFVEFGEVQSAQSAATELHGRGFSNRTVAVEYMDEGKYARREL 719 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.100.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig75.100.2 >prot_P-littoralis_Contig75.100.2 ID=prot_P-littoralis_Contig75.100.2|Name=mRNA_P-littoralis_Contig75.100.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=426bp MLVSRGSGVMQPAAPQLMARLPGASNQQTRHARRLYIGGCPKTTEEEMSNback to top mRNA from alignment at P-littoralis_Contig75:328421..339576- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig75.100.2 ID=mRNA_P-littoralis_Contig75.100.2|Name=mRNA_P-littoralis_Contig75.100.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11156bp|location=Sequence derived from alignment at P-littoralis_Contig75:328421..339576- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig75:328421..339576- >mRNA_P-littoralis_Contig75.100.2 ID=mRNA_P-littoralis_Contig75.100.2|Name=mRNA_P-littoralis_Contig75.100.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1278bp|location=Sequence derived from alignment at P-littoralis_Contig75:328421..339576- (Pylaiella littoralis U1_48)back to top |