mRNA_P-littoralis_Contig1147.6.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JBS7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS7_9PHAE) HSP 1 Score: 253 bits (647), Expect = 8.170e-69 Identity = 198/441 (44.90%), Postives = 259/441 (58.73%), Query Frame = 3
Query: 462 MWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGYHQGRGGGA-----------GRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 1745
MWP GVS GG TG G P G T + P + P N T+ +LSW +R L + +N ++++ G+A +PV++C+D L Y V +H R + ILEA APFE+ L++C SV +AW+ + W LP + LL +L+ + M++DEDP+ F +R QL + LR++G+ K++ E+V+I+VRQLP YDVEKRT L L+R E++ ++R YA A ++R + + TPA NPHALV+G G+ G GG G G ++ G G QQQ PQ R QQ XXXXXXXXXXXXXXXXXXX XXXXXX Q Q +XXXXXXXXXXXXX GVGGI+DCGSNA+YHQP+SLPPP +PMG V+ CGRCGR+ H DC APRRFEG
Sbjct: 1 MWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPPNCTADTLLSWRRRFLAYMDNHDLQHTIFGSAE-VPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSAALTPAVSVNPHALVVGRGF--GHGGNXXXXXXXXXXXXGNNCDGRGQHWSSGGGVVQQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXXQQXXXXXXSQMQPYRXXXXXXXXXXXXXQPALN----------------GVGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCGRNDHHAIDCAAPRRFEG 416
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JU47_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU47_9PHAE) HSP 1 Score: 237 bits (604), Expect = 4.830e-65 Identity = 193/439 (43.96%), Postives = 250/439 (56.95%), Query Frame = 3
Query: 462 MWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGY-HQGRGGGAGRTRGGGNVAFADGRGQQ--------QQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 1745
MWP GVS GG TG G P G T + P + P N T+ LSW +R L + +N N+++ G+A +PV++C+D L Y V +H R + ILEA APFE+ L++C SV +AW+ + W LP + LL +L+ + M++DEDP+ F +R QL + LR++G+ K++ E+V+I+VRQLP YDVEKRT L L+R E++ ++R YA A ++R + ++TPA NPHALV+G + H G DGRGQ QQ PQ R QQ XXXXXXXXXXXXXXXXXXX XXXXXX Q Q +XXXXXXXXXXXXX GVGGI+DCGSNA+YHQP SLPPP +PMG+V+ CGR H C APRRFEG
Sbjct: 1 MWPGGVSHDGG-TGVPGL--PLGGTIVTTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAE-VPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSAASTPAVSVNPHALVVGRDFGHGGNXXXXXXXXXXXXXXNCDGRGQHWSSXXXXXXQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXXQQXXXXXXXQMQPYRXXXXXXXXXXXXXQPALN----------------GVGGIYDCGSNAVYHQPKSLPPPGAPMGIVHRCGRXXXXXHHAIGCAAPRRFEG 416
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE) HSP 1 Score: 241 bits (616), Expect = 1.620e-62 Identity = 188/441 (42.63%), Postives = 250/441 (56.69%), Query Frame = 3
Query: 432 GGTSGVNFGGMWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGY-HQGRGGGAGRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 1745
GG S MWP GVS GG TG G P G T + P + P N T+ VLSW +R L + +N N+++ F G+A +PV++C+D+ L+ Y V +H R + ILEA APFE+ L++C SV +AW+ + W LP + LL +L+ + M++DE+P+ F +R QL + LR++G+ K++ E+V+I+VRQ P YDVEKRT L L+R E++ ++R YA A ++R + + TPA NPHALV+G G+ H G DGRGQ W G G + Q XXXXXXXXXXXXXXXX +QQ XXXXXXXX XXXXXXXX A G VGGI+DCGS+A+YHQP+SLPPP++PMG V+ CGR DC APRRFEG
Sbjct: 63 GGASSAPVRPMWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPPNCTADTVLSWRRRFLAYVDNHNLQHTFFGSAE-VPVVSCQDKGYLIRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDDITMSDDENPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQYPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSAALTPAVSVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQH---WSSGGGVVQQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXRQQXXXXXXXXXXPYXXXXXXXXXXXXXXXPALNG-----VGGIYDCGSDAVYHQPESLPPPDAPMGTVHRCGRXXXXXXHAIDCAAPRRFEG 488
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE) HSP 1 Score: 239 bits (610), Expect = 4.450e-62 Identity = 197/449 (43.88%), Postives = 255/449 (56.79%), Query Frame = 3
Query: 432 GGTSGVNFGGMWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGY-HQGRGGGAGRTRGGGNVAFADGRGQQ--------QQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 1745
GG S MWP GVS GG TG G P G T + P + P N T+ LSW +R L + +N N+++ G+A +PV++C+D L Y V +H R + ILEA APFE+ L++C SV +AW+ + W LP + LL +L+ + M++DEDP+ F +R QL + LR++G+ K++ E+V+I+VRQLP YDVEKRT L L+R E++ ++R YA A ++R + ++TPA NPHALV+G G+ H G DGRGQ QQQ PQ R QQ XXXXXXXXXXXXXXXXXXX XXXXXX Q Q +XXXXXXXXXXXXX GVGG++DCGSNA+ HQP+SLPPP +PMG V+ CGR H DC APRRFEG
Sbjct: 63 GGASSAPVRPMWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAE-VPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSVASTPAVFVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQHWSSGXXVVQQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXXQQXXXXXXSQMQPYRXXXXXXXXXXXXXQPALN----------------GVGGVYDCGSNAVSHQPESLPPPGTPMGTVHRCGRXXXXXHHAIDCAAPRRFEG 488
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5LA89_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA89_9PHAE) HSP 1 Score: 222 bits (565), Expect = 5.250e-60 Identity = 180/426 (42.25%), Postives = 233/426 (54.69%), Query Frame = 3
Query: 432 GGTSGVNFGGMWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGYHQGRGGGAGRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSG 1703
GG S MWP GVS GG TG G P G T + P + P N T+ LSW +R L + +N N+++ G+A +PV++C+D L Y V +H R + ILEA APFE+ L++C SV AW+ + W LP + LL +L+ + M++DEDP+ F +R QL + LR++G+ K+E E+VRI+VRQLP YDVEKRT L + L+R E++ ++R YA A ++R + + TPA NPHALV+G G+ G G W Q XXXXXX XXXXXXXXXXXXXXX QQ XXXXX XXXXXXX A G VGGI+DCGSNA+YHQP+SLPPP +PMG V+ CGRCGR G
Sbjct: 63 GGASSAPVRPMWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAE-VPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAGAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSEQEVVRILVRQLPARYDVEKRTSLSNRDLTRAELQDVVRGRYATLKASEMRE---RGSAALTPAVSVNPHALVVGRGF--GHGXXXXXXXXXXXXXXXXXXXXXXXHWSSXXXXXXXXQPQLQVQQYRQPQXXXXXXQQPNKXXXXXXXXXXXXXXXXXXQQXXXXXXXQMQPYRXXXXXXXXXXXXXXPALNG-----VGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCGRHG 474
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5K2K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K1_9PHAE) HSP 1 Score: 231 bits (588), Expect = 6.820e-59 Identity = 182/437 (41.65%), Postives = 239/437 (54.69%), Query Frame = 3
Query: 432 GGTSGVNFGGMWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGY-HQGRGGGAGRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPR 1733
GG S MWP GVS GG TG G P G T + P + P N T+ LSW +R L + +N N+++ G+A +PV++C+D L Y V +H R + ILEA APFE+ L++C SV +AW+ + W LP + LL +L+ + M++DEDP+ F +R QL + LR++G+ K++ E+V+I+VRQLP YDVEKRT L L+R E++ ++R YA A ++R + + TPA NPHALV+G G+ H G DGRGQ W G G + Q XXXXXXXXXXXXXXXX +QQ XXXXXX X XXXXXXX A G VGGI+DCGSNA+YHQP+SLPPP +PMG V+ CG DC APR
Sbjct: 63 GGASSAPVRPMWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAE-VPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSAALTPAVSVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQH---WSSGGGVVQQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXRQQXXXXXXXXMXPYRXXXXXXXXXXXXXXPALNG-----VGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGXXXXXXXXAIDCAAPR 484
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE) HSP 1 Score: 191 bits (484), Expect = 3.400e-46 Identity = 182/488 (37.30%), Postives = 240/488 (49.18%), Query Frame = 3
Query: 432 GGTSGVNFGGMWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTL------------------------------------------------LRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGYHQGRGGGAGRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 1745
GG S MWP GVS GG TG G P G T + P + P N T+ LSW +R L + +N N+++ G+A +PV++C+D L Y V +H R + ILEA APFE+ L++C SV +AW+ + W LP + LL +L+ + M++DEDP+ F +R QL + LR++G+ K++ E+V+I+VRQLP YDVEKRT L + L+R E++ ++R Y A ++R + ++TPA +G G+ X X X XXXXXXXXXXXXXXXXXX+QQQ XXXXXXX XXXXXXXXXX A GVGGI+DCGSNA+YHQP+SLPPP +PMG V+ CGRC R GH DC APRRFEG
Sbjct: 63 GGVSSAPVRPMWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPLNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAE-VPVVSCKDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWFLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSNRDLTRAELQDVVRGRYTTLKASEMRE---RGSAASTPAV------SXVGRGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQYRQPQQPXRXMQQPNXXXXXXXXXXXXXXXXXXRQQQXXXXXXXXXXYXXXXXXXXXXXXXXXPALN-------GVGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCERHGHHAIDCAAPRRFEG 530
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JXN1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN1_9PHAE) HSP 1 Score: 139 bits (349), Expect = 5.600e-30 Identity = 127/282 (45.04%), Postives = 158/282 (56.03%), Query Frame = 3
Query: 903 MAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGY-HQGRGGGAGRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 1745
M++DEDP+ F +R QL + LR++G+ K++ E+V+I+VRQLP YDVEKRT L L+R E++ ++R YA A ++R + + TPA NPHALV+G G+ H G DGRGQ W G G + Q XXXXXXXXXXXXXXXX +QQ XXXXXX X XXXXXXX A G VGG +DCGSNA+YHQP+SLPPP +PMG V+ CGR DC APRRFEG
Sbjct: 1 MSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSAALTPAVSVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQH---WSSGGGVVQQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXRQQXXXXXXXXMXPYRXXXXXXXXXXXXXXPALNG-----VGGNYDCGSNAVYHQPESLPPPGAPMGTVHRCGRXXXXXXHAIDCAAPRRFEG 271
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBM3_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 6.990e-17 Identity = 55/129 (42.64%), Postives = 66/129 (51.16%), Query Frame = 3
Query: 1584 GVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEGNCSTCSQYGHISRFCAVARGVRTTGNYLNVVTTCGESNVDGHQQMYVDA---------TPGGPAVYHDQQGLDGA 1943
GVGGI+DCG NA+YHQP+S PPP +PMG V+ C DC APRRFEG C QYGH+ R CA + +LNVVT+ G G + Y A P VY+ L GA
Sbjct: 121 GVGGIYDCGCNAVYHQPESPPPPGAPMGTVHRCXXXXXXXXXAIDCAAPRRFEGTSGACDQYGHMWRNCAKSN----RHPHLNVVTSAGAL---GPEYAYTTADTSAVQFRDVPAADGVYYSDTMLAGA 242
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 1.370e-15 Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 3
Query: 1584 GVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 1745
GVGGI+DCGSNA+YHQP+SLPPP +PM V+ C RCGR GH DC APRRFEG
Sbjct: 233 GVGGIYDCGSNAVYHQPESLPPPGAPMSTVHRCCRCGRHGHHAIDCAAPRRFEG 286 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1147.6.1 >prot_P-littoralis_Contig1147.6.1 ID=prot_P-littoralis_Contig1147.6.1|Name=mRNA_P-littoralis_Contig1147.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=627bp MADAAVGANSLEELNARFVELEEASRQRDLAHKAEVADLRQQLEHMKAAPback to top mRNA from alignment at P-littoralis_Contig1147:61937..64614+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1147.6.1 ID=mRNA_P-littoralis_Contig1147.6.1|Name=mRNA_P-littoralis_Contig1147.6.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2678bp|location=Sequence derived from alignment at P-littoralis_Contig1147:61937..64614+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1147:61937..64614+ >mRNA_P-littoralis_Contig1147.6.1 ID=mRNA_P-littoralis_Contig1147.6.1|Name=mRNA_P-littoralis_Contig1147.6.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1881bp|location=Sequence derived from alignment at P-littoralis_Contig1147:61937..64614+ (Pylaiella littoralis U1_48)back to top |