prot_P-littoralis_Contig1147.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1147.6.1
Unique Nameprot_P-littoralis_Contig1147.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length627
Homology
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JBS7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS7_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 5.820e-71
Identity = 198/441 (44.90%), Postives = 259/441 (58.73%), Query Frame = 0
Query:   85 MWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGYHQGRGGGA-----------GRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 512
            MWP GVS  GG TG  G   P G T +  P  + P N T+  +LSW +R L + +N ++++   G+A  +PV++C+D   L   Y    V +H R +  ILEA   APFE+ L++C SV +AW+ +  W LP    +  LL  +L+ + M++DEDP+ F +R  QL + LR++G+ K++ E+V+I+VRQLP  YDVEKRT L    L+R E++ ++R  YA   A ++R      + + TPA   NPHALV+G G+  G GG             G    G    ++ G G  QQQ PQ      R  QQ         XXXXXXXXXXXXXXXXXXX  XXXXXX Q Q  +XXXXXXXXXXXXX                     GVGGI+DCGSNA+YHQP+SLPPP +PMG V+ CGRCGR+ H   DC APRRFEG
Sbjct:    1 MWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPPNCTADTLLSWRRRFLAYMDNHDLQHTIFGSAE-VPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSAALTPAVSVNPHALVVGRGF--GHGGNXXXXXXXXXXXXGNNCDGRGQHWSSGGGVVQQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXXQQXXXXXXSQMQPYRXXXXXXXXXXXXXQPALN----------------GVGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCGRNDHHAIDCAAPRRFEG 416          
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JU47_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU47_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 5.480e-67
Identity = 193/439 (43.96%), Postives = 250/439 (56.95%), Query Frame = 0
Query:   85 MWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGY-HQGRGGGAGRTRGGGNVAFADGRGQQ--------QQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 512
            MWP GVS  GG TG  G   P G T +  P  + P N T+   LSW +R L + +N N+++   G+A  +PV++C+D   L   Y    V +H R +  ILEA   APFE+ L++C SV +AW+ +  W LP    +  LL  +L+ + M++DEDP+ F +R  QL + LR++G+ K++ E+V+I+VRQLP  YDVEKRT L    L+R E++ ++R  YA   A ++R      + ++TPA   NPHALV+G  + H G                 DGRGQ          QQ PQ      R  QQ         XXXXXXXXXXXXXXXXXXX  XXXXXX Q Q  +XXXXXXXXXXXXX                     GVGGI+DCGSNA+YHQP SLPPP +PMG+V+ CGR     H    C APRRFEG
Sbjct:    1 MWPGGVSHDGG-TGVPGL--PLGGTIVTTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAE-VPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSAASTPAVSVNPHALVVGRDFGHGGNXXXXXXXXXXXXXXNCDGRGQHWSSXXXXXXQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXXQQXXXXXXXQMQPYRXXXXXXXXXXXXXQPALN----------------GVGGIYDCGSNAVYHQPKSLPPPGAPMGIVHRCGRXXXXXHHAIGCAAPRRFEG 416          
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 1.310e-64
Identity = 188/441 (42.63%), Postives = 250/441 (56.69%), Query Frame = 0
Query:   75 GGTSGVNFGGMWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGY-HQGRGGGAGRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 512
            GG S      MWP GVS  GG TG  G   P G T +  P  + P N T+  VLSW +R L + +N N+++ F G+A  +PV++C+D+  L+  Y    V +H R +  ILEA   APFE+ L++C SV +AW+ +  W LP    +  LL  +L+ + M++DE+P+ F +R  QL + LR++G+ K++ E+V+I+VRQ P  YDVEKRT L    L+R E++ ++R  YA   A ++R      + + TPA   NPHALV+G G+ H G                 DGRGQ    W  G G   +   Q                    XXXXXXXXXXXXXXXX  +QQ  XXXXXXXX  XXXXXXXX        A  G     VGGI+DCGS+A+YHQP+SLPPP++PMG V+ CGR         DC APRRFEG
Sbjct:   63 GGASSAPVRPMWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPPNCTADTVLSWRRRFLAYVDNHNLQHTFFGSAE-VPVVSCQDKGYLIRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDDITMSDDENPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQYPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSAALTPAVSVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQH---WSSGGGVVQQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXRQQXXXXXXXXXXPYXXXXXXXXXXXXXXXPALNG-----VGGIYDCGSDAVYHQPESLPPPDAPMGTVHRCGRXXXXXXHAIDCAAPRRFEG 488          
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 4.380e-64
Identity = 197/449 (43.88%), Postives = 255/449 (56.79%), Query Frame = 0
Query:   75 GGTSGVNFGGMWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGY-HQGRGGGAGRTRGGGNVAFADGRGQQ--------QQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 512
            GG S      MWP GVS  GG TG  G   P G T +  P  + P N T+   LSW +R L + +N N+++   G+A  +PV++C+D   L   Y    V +H R +  ILEA   APFE+ L++C SV +AW+ +  W LP    +  LL  +L+ + M++DEDP+ F +R  QL + LR++G+ K++ E+V+I+VRQLP  YDVEKRT L    L+R E++ ++R  YA   A ++R      + ++TPA   NPHALV+G G+ H G                 DGRGQ         QQQ PQ      R  QQ         XXXXXXXXXXXXXXXXXXX  XXXXXX Q Q  +XXXXXXXXXXXXX                     GVGG++DCGSNA+ HQP+SLPPP +PMG V+ CGR     H   DC APRRFEG
Sbjct:   63 GGASSAPVRPMWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAE-VPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSVASTPAVFVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQHWSSGXXVVQQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXXQQXXXXXXSQMQPYRXXXXXXXXXXXXXQPALN----------------GVGGVYDCGSNAVSHQPESLPPPGTPMGTVHRCGRXXXXXHHAIDCAAPRRFEG 488          
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5LA89_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA89_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 9.410e-62
Identity = 180/426 (42.25%), Postives = 233/426 (54.69%), Query Frame = 0
Query:   75 GGTSGVNFGGMWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGYHQGRGGGAGRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSG 498
            GG S      MWP GVS  GG TG  G   P G T +  P  + P N T+   LSW +R L + +N N+++   G+A  +PV++C+D   L   Y    V +H R +  ILEA   APFE+ L++C SV  AW+ +  W LP    +  LL  +L+ + M++DEDP+ F +R  QL + LR++G+ K+E E+VRI+VRQLP  YDVEKRT L +  L+R E++ ++R  YA   A ++R      + + TPA   NPHALV+G G+  G G                        W            Q          XXXXXX     XXXXXXXXXXXXXXX   QQ  XXXXX      XXXXXXX        A  G     VGGI+DCGSNA+YHQP+SLPPP +PMG V+ CGRCGR G
Sbjct:   63 GGASSAPVRPMWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAE-VPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAGAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSEQEVVRILVRQLPARYDVEKRTSLSNRDLTRAELQDVVRGRYATLKASEMRE---RGSAALTPAVSVNPHALVVGRGF--GHGXXXXXXXXXXXXXXXXXXXXXXXHWSSXXXXXXXXQPQLQVQQYRQPQXXXXXXQQPNKXXXXXXXXXXXXXXXXXXQQXXXXXXXQMQPYRXXXXXXXXXXXXXXPALNG-----VGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCGRHG 474          
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5K2K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K1_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 6.660e-61
Identity = 182/437 (41.65%), Postives = 239/437 (54.69%), Query Frame = 0
Query:   75 GGTSGVNFGGMWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGY-HQGRGGGAGRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPR 508
            GG S      MWP GVS  GG TG  G   P G T +  P  + P N T+   LSW +R L + +N N+++   G+A  +PV++C+D   L   Y    V +H R +  ILEA   APFE+ L++C SV +AW+ +  W LP    +  LL  +L+ + M++DEDP+ F +R  QL + LR++G+ K++ E+V+I+VRQLP  YDVEKRT L    L+R E++ ++R  YA   A ++R      + + TPA   NPHALV+G G+ H G                 DGRGQ    W  G G   +   Q                    XXXXXXXXXXXXXXXX  +QQ  XXXXXX X   XXXXXXX        A  G     VGGI+DCGSNA+YHQP+SLPPP +PMG V+ CG          DC APR
Sbjct:   63 GGASSAPVRPMWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPPNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAE-VPVVSCQDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSAALTPAVSVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQH---WSSGGGVVQQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXRQQXXXXXXXXMXPYRXXXXXXXXXXXXXXPALNG-----VGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGXXXXXXXXAIDCAAPR 484          
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 1.360e-47
Identity = 182/488 (37.30%), Postives = 240/488 (49.18%), Query Frame = 0
Query:   75 GGTSGVNFGGMWPRGVSQGGGGTGREGFVFPRGRTAINPP--KFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAAAIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACESVVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTL------------------------------------------------LRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGYHQGRGGGAGRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 512
            GG S      MWP GVS  GG TG  G   P G T +  P  + P N T+   LSW +R L + +N N+++   G+A  +PV++C+D   L   Y    V +H R +  ILEA   APFE+ L++C SV +AW+ +  W LP    +  LL  +L+ + M++DEDP+ F +R  QL + LR++G+ K++ E+V+I+VRQLP  YDVEKRT                                                 L +  L+R E++ ++R  Y    A ++R      + ++TPA         +G G+                                           X         X X     XXXXXXXXXXXXXXXXXX+QQQ   XXXXXXX XXXXXXXXXX      A         GVGGI+DCGSNA+YHQP+SLPPP +PMG V+ CGRC R GH   DC APRRFEG
Sbjct:   63 GGVSSAPVRPMWPGGVSHDGG-TGVPGL--PLGGTIVRTPVPRIPLNCTADTFLSWRRRFLAYVDNHNLQHTIFGSAE-VPVVSCKDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWFLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSNRDLTRAELQDVVRGRYTTLKASEMRE---RGSAASTPAV------SXVGRGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQYRQPQQPXRXMQQPNXXXXXXXXXXXXXXXXXXRQQQXXXXXXXXXXYXXXXXXXXXXXXXXXPALN-------GVGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCERHGHHAIDCAAPRRFEG 530          
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JXN1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN1_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.280e-30
Identity = 127/282 (45.04%), Postives = 158/282 (56.03%), Query Frame = 0
Query:  232 MAEDEDPRFFMTRAEQLLSMLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRDSYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGY-HQGRGGGAGRTRGGGNVAFADGRGQQQQQWPQGSGGSSRPSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQQQQVQXXXXXXXXXXXXXXXXXXLARDGGASAHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 512
            M++DEDP+ F +R  QL + LR++G+ K++ E+V+I+VRQLP  YDVEKRT L    L+R E++ ++R  YA   A ++R      + + TPA   NPHALV+G G+ H G                 DGRGQ    W  G G   +   Q                    XXXXXXXXXXXXXXXX  +QQ  XXXXXX X   XXXXXXX        A  G     VGG +DCGSNA+YHQP+SLPPP +PMG V+ CGR         DC APRRFEG
Sbjct:    1 MSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRE---RGSAALTPAVSVNPHALVVGRGFGHGGNXXXXXXXXXXXXGNNCDGRGQH---WSSGGGVVQQQQPQLQVQQYRQPQQPQRHMQQPNXXXXXXXXXXXXXXXXXXRQQXXXXXXXXMXPYRXXXXXXXXXXXXXXPALNG-----VGGNYDCGSNAVYHQPESLPPPGAPMGTVHRCGRXXXXXXHAIDCAAPRRFEG 271          
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBM3_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.200e-17
Identity = 55/129 (42.64%), Postives = 66/129 (51.16%), Query Frame = 0
Query:  459 GVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEGNCSTCSQYGHISRFCAVARGVRTTGNYLNVVTTCGESNVDGHQQMYVDA---------TPGGPAVYHDQQGLDGA 578
            GVGGI+DCG NA+YHQP+S PPP +PMG V+ C           DC APRRFEG    C QYGH+ R CA +        +LNVVT+ G     G +  Y  A          P    VY+    L GA
Sbjct:  121 GVGGIYDCGCNAVYHQPESPPPPGAPMGTVHRCXXXXXXXXXAIDCAAPRRFEGTSGACDQYGHMWRNCAKSN----RHPHLNVVTSAGAL---GPEYAYTTADTSAVQFRDVPAADGVYYSDTMLAGA 242          
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 6.360e-16
Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 0
Query:  459 GVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHKEFDCTAPRRFEG 512
            GVGGI+DCGSNA+YHQP+SLPPP +PM  V+ C RCGR GH   DC APRRFEG
Sbjct:  233 GVGGIYDCGSNAVYHQPESLPPPGAPMSTVHRCCRCGRHGHHAIDCAAPRRFEG 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1147.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JBS7_9PHAE5.820e-7144.90CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JU47_9PHAE5.480e-6743.96CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JVD9_9PHAE1.310e-6442.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN41_9PHAE4.380e-6443.88Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LA89_9PHAE9.410e-6242.25Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2K1_9PHAE6.660e-6141.65Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYB5_9PHAE1.360e-4737.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN1_9PHAE1.280e-3045.04Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JBM3_9PHAE3.200e-1742.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV09_9PHAE6.360e-1672.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 490..506
e-value: 0.67
score: 12.3
coord: 513..529
e-value: 0.51
score: 13.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 491..504
score: 8.77913
NoneNo IPR availableGENE3D4.10.60.10coord: 414..533
e-value: 1.3E-7
score: 33.2
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 175..296
e-value: 2.1E-11
score: 43.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 600..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..66
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 488..528

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1147contigP-littoralis_Contig1147:62146..64026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1147.6.1mRNA_P-littoralis_Contig1147.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1147 61937..64614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1147.6.1 ID=prot_P-littoralis_Contig1147.6.1|Name=mRNA_P-littoralis_Contig1147.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=627bp
MADAAVGANSLEELNARFVELEEASRQRDLAHKAEVADLRQQLEHMKAAP
SAAETTSAPRAAPVSGASTRYGGMGGTSGVNFGGMWPRGVSQGGGGTGRE
GFVFPRGRTAINPPKFPSNGTSSQVLSWMQRMLLFFENENIEYIFNGNAA
AIPVINCRDRSALLNTYDENEVKDHLRAFGIILEATANAPFESRLHACES
VVDAWKKISSWILPTSSDEIFLLTQQLETVQMAEDEDPRFFMTRAEQLLS
MLRSIGVDKTEPEIVRIIVRQLPDTYDVEKRTLLRDEGLSRDEVESIIRD
SYARRVAGQLRRPALTSTKSTTPATPSNPHALVIGNGYHQGRGGGAGRTR
GGGNVAFADGRGQQQQQWPQGSGGSSRPSQQQQQQQWPQGSGGSSRPPQQ
QQGQRWPQGNGGSSRPPQQQQQVQRWPHGGNGSSRPPQQQQQLARDGGAS
AHRGKSQLGVGGIFDCGSNAMYHQPDSLPPPNSPMGMVYMCGRCGRSGHK
EFDCTAPRRFEGNCSTCSQYGHISRFCAVARGVRTTGNYLNVVTTCGESN
VDGHQQMYVDATPGGPAVYHDQQGLDGATAAGDGQWNCAVHHVSAEQANV
HASLGDGGSGEDDSWNSGVVQQEYLA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf