prot_P-littoralis_Contig203.21.4 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: D8LQZ5_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ5_ECTSI) HSP 1 Score: 504 bits (1297), Expect = 1.230e-174 Identity = 309/423 (73.05%), Postives = 335/423 (79.20%), Query Frame = 0
Query: 1 MPRLDRMGLDKRTLGVLASLPVPITLAESLLSRDSEQLALECGVSLRAVNKLRYLVALRCQPQPPVPDRRPSDSQENDGVPHE-----EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASRLLPSSSFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQ 418
MPRLDRMGLD+RTLGVLASLPVPI LAESLLSRD EQLALECGVS++AV+KLRYLVALRCQPQPPVPDRR + + P+ EG XXXXXXXXXXXXXXXXXX XXXXXXXXX P SF SAD+LYRQA++VGGFVTTGSD LDNLLCKGLMLHHVVEVVGRSS+GKTQ LCLTAAVAAASHGIGVLY+DTANGCSVRRMQQIARSRYADA+GEM+ARQMDALLDRLRVVRAFDISRV SALVAYIDGV EGGR+G+YS CRLVILDSVTAV+SPLLGG KNPAGHGLMASLGHLLNRAA+QCSACVLVANSTVA R + E+EGPRAALG+TWEGVPSIRVLL +++ G G +A +TA LLKHPAQ
Sbjct: 1 MPRLDRMGLDERTLGVLASLPVPIVLAESLLSRDPEQLALECGVSMKAVSKLRYLVALRCQPQPPVPDRRAPEDNGDGATPNTQGHGGEGKRGAGSSTXXXXXXXXXXXXXXXXXXSPRRIGXXXXXXXXXXXXXXPPLLSFESADALYRQARDVGGFVTTGSDSLDNLLCKGLMLHHVVEVVGRSSSGKTQ---------------LCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVVRAFDISRVMSALVAYIDGVMEGGRNGVYSDCRLVILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLVANSTVAPR-GISEEEGPRAALGLTWEGVPSIRVLLAEASAAAGGASGSGDAGGADHGTVG--EASPRTATLLKHPAQ 405
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A6H5L2A5_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A5_9PHAE) HSP 1 Score: 248 bits (632), Expect = 8.670e-78 Identity = 125/139 (89.93%), Postives = 135/139 (97.12%), Query Frame = 0
Query: 203 LCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLV 341
LCLTAAVAAASHGIGVLY+DTANGCSVRRMQQIARSRYADA+GEM+ARQ+DALLDRLRVVRAFD+SRV SALVAYIDGV EGGR+G+YS CRL+ILDSVTAV+SPLLGG KNPAGHGLMASLGHLLNRAA+QCSACVLV
Sbjct: 14 LCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMAARQVDALLDRLRVVRAFDVSRVMSALVAYIDGVMEGGRNGVYSDCRLIILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLV 152
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A835YM23_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM23_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.430e-36 Identity = 116/338 (34.32%), Postives = 150/338 (44.38%), Query Frame = 0
Query: 133 PSSSFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGV-TEGGRDGIYSKC------------RLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGP---------------------RAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVV-FEIGDGGVID 435
P + F SA + YR A GG + G +D LL GL L V EVVG++ AGKTQ LC++AA AAS GIGVLY+DT NGCS RR+Q+IA +R A+ A L + + R + ++ V +AL DG+ T R I + RLVILDS AV++PLLGG N G +A+L L+ A S VLV N VA R RAALG W P++R+LL AQ+G + A L KHP + CG F +G GV+D
Sbjct: 78 PLAIFESAAARYRYAMRQGGLLQMGCSSIDGLLGGGLALQQVTEVVGQTGAGKTQ---------------LCMSAAAVAASSGIGVLYIDTTNGCSPRRLQEIAAARGGSAAAP-------AALSHITIERCYSLANVLAAL----DGLATRLVRTPIATAAXXXXXXXXAHAIRLVILDSAAAVLAPLLGGEGNAPGAAALATLAAALSHTALSLSVAVLVTNGAVADRAPXXXXXXXXXGSRGFGXXXXXXXXXXXXKRAALGARWAAAPAVRLLLDGGAQSG------------------------RVAVLDKHPLRACGGAAARFAVGGAGVVD 365
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A4X2LHD2_VOMUR (DNA repair protein n=2 Tax=Vombatus ursinus TaxID=29139 RepID=A0A4X2LHD2_VOMUR) HSP 1 Score: 114 bits (285), Expect = 7.510e-25 Identity = 101/300 (33.67%), Postives = 134/300 (44.67%), Query Frame = 0
Query: 134 SSSFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCL-TAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGG 432
S F AD LY + K + TG LD LL GL V E+ G ++GKTQ +CL TAA A S G VLY+D+ G + R+ Q+ ++R D + A L R+ VVR FDI ++ A +++ + ++V++DSV+AVVSPLLGG ++ G LM L L A + VLV N R E R ALG +W VPS RV L A+ G G + A + A L K P QP G V EIG G
Sbjct: 63 SFPFNGAD-LYEELKTSTAILATGIASLDKLLDSGLYTGEVTEITGPPASGKTQ---------------VCLCTAASVAYSLGQSVLYIDSTGGLTASRLLQLLQARTEDEEEQAGA------LQRIHVVRVFDIFQMLDAFQDLRGSISQQATNAS-GPVKIVVVDSVSAVVSPLLGG-QHSEGLALMMQLARELKTLARELGIAVLVTNHVTRER----ESGKLRPALGRSWSFVPSTRVFL--EAREGPG-----------------APAGCRVASLTKSPRQPTGIQEVMEIGSCG 315
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A287D3P6_ICTTR (DNA repair protein n=6 Tax=Sciuridae TaxID=55153 RepID=A0A287D3P6_ICTTR) HSP 1 Score: 114 bits (284), Expect = 1.050e-24 Identity = 101/290 (34.83%), Postives = 132/290 (45.52%), Query Frame = 0
Query: 143 LYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGI--GVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGP-RAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIG 429
LY + K ++TG LD LL GL V E+VG +GKTQ LC+ A VA HG+ VLY+D+ G + R+ Q+ + R D + A L R++VVRAFDI ++ L VT+ R ++VI+DSVTAVVSPLLGG + G LM L L A + S V+V N D D G + ALG +W VPS R+LL TG AS + +T L K P QP G V +IG
Sbjct: 71 LYEEMKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC-------------LCVAANVA---HGLQQNVLYIDSNGGLTASRLLQLLQPRTQDEEEQARA------LQRIQVVRAFDIFQMLDVLQDLRGTVTQQVRCSS-GTVKVVIVDSVTAVVSPLLGGQQRD-GLALMMQLARELKTLARELSMAVVVTNHMT-----RDRDSGKFKPALGRSWSFVPSTRILLDIIEGTG------------------ASGSSQRTVSLTKSPRQPTGFQEVVDIG 313
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: UPI00049064F1 (DNA repair protein RAD51 homolog 4 n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=UPI00049064F1) HSP 1 Score: 113 bits (283), Expect = 1.520e-24 Identity = 97/295 (32.88%), Postives = 135/295 (45.76%), Query Frame = 0
Query: 143 LYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGI--GVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRD--GIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGP-RAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGG 432
LY + K ++TG LD LL GL V E+VG +GKTQ LC+TA VA HG+ VLY+D+ G + R+ Q+ ++R D + +A L R++V RAFDI ++ L + V + G ++V++DSVTAVVSPLLGG + G LM L L A V+V N D D G + ALG +W VP+ R+LL+ + ++G AS+ TA L K P QP G V +I G
Sbjct: 71 LYEELKSSTAILSTGIRSLDKLLDAGLYTGEVTEIVGAPGSGKTQVC-------------LCVTAHVA---HGLQQNVLYIDSNGGLTASRLLQLLQARTQDEEEQAAA------LQRIQVARAFDIFQMLDVLQDFRGTVAQQSLQVTGSSGTVKVVVVDSVTAVVSPLLGGQQRE-GLALMMQLARELKTLARDLGLAVVVTNHVT-----RDRDSGKLKPALGRSWSFVPNTRILLSTTEESG------------------ASERSWCTACLTKSPRQPTGVQEVIDIATWG 319
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A1Y1HKY4_KLENI (DNA repair protein RAD51 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKY4_KLENI) HSP 1 Score: 113 bits (282), Expect = 2.570e-24 Identity = 92/307 (29.97%), Postives = 145/307 (47.23%), Query Frame = 0
Query: 136 SFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASH-GIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDIS---RVTSALVAYIDGVT-----EGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGV 433
++T +L+ + V+TG +D+++ GL + E+VG S++GKTQ LCL AA AAA V ++DT+N S R+ QI + +++ + R+ +AFDI R+ L+ ++DG +G + + K +L+ILDS +A++SP+LGG + GH LM SL LL + A + + VLV N TV+ E P+ ALG +W+ VPS+R+ L A E SD T T + KH CG +V + + G+
Sbjct: 63 TWTDGATLFERLTTSTTLVSTGCPSIDDVIGGGLRPGTITELVGTSASGKTQ---------------LCLQAAAAAALELRASVAFIDTSNSFSAHRLAQIVTGLHGKDKFVEHKQELRNVARRVLCFKAFDIYTALRLLDDLLVHMDGAESKRGGDGNQGDFFQKLQLLILDSASAIISPVLGGA-HTQGHALMVSLSGLLRQIALKHNIAVLVTNHTVSG-----EGGRPKPALGESWKSVPSVRLAL---------------------AREDESDCCTAT--VTKHTIGACGESVPYVLSRDGL 325
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: UPI0018F4FA24 (DNA repair protein RAD51 homolog 4 n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F4FA24) HSP 1 Score: 112 bits (280), Expect = 3.190e-24 Identity = 93/292 (31.85%), Postives = 131/292 (44.86%), Query Frame = 0
Query: 143 LYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGIG--VLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGG 432
+Y + E + TG GLD +L GL V E+ G +GKTQ +CL AA A+ +HG+G VL++D+ G + R+ Q+ R+R D + A L R+RVVR+FD V AL ++ G D ++V++DSV+AV+SPLLGG + G +M L L A + V+V N R E PR LG +W VPS RV+L EGA +TA+L K P QP G ++ G
Sbjct: 71 VYEELAETTAILPTGLPGLDQILDSGLYTGEVAELTGAPGSGKTQ---------------VCLCAA-ASVAHGLGRDVLFVDSTGGFTATRLLQLLRARTRDEEEQAGA------LRRIRVVRSFDAFGVLDALQDLRGSFSQQGMDAA-GPVKMVVVDSVSAVISPLLGG-RQSEGLAVMMQLARELKTLAREFGVAVMVTNHVTRDR----ETGRPRPGLGRSWSFVPSTRVVL-----------------------EGAGPR--RTARLAKSPRQPTGIQEALDLDSWG 309
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A8B7Y1H2_ACAPL (DNA repair protein RAD51 homolog 4-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y1H2_ACAPL) HSP 1 Score: 111 bits (278), Expect = 6.370e-24 Identity = 93/283 (32.86%), Postives = 128/283 (45.23%), Query Frame = 0
Query: 154 VTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAV---AAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGV 433
++TG LD LL GL + EV G + GKTQ LC+TAA AAA VLY+DT G S +R+Q + R S + M A RLR R FD+ + S L + + D Y +L+ +DS+TAVVSPLLGG + GHGLM L L A + S +L+ N+ V + + ALG TW VP R+LLT + +++ S + AKL+K QP + F+I D G+
Sbjct: 82 LSTGCTSLDELLDGGLYTSELTEVTGGPATGKTQ---------------LCMTAAANITAAAQQN--VLYIDTNGGFSSQRLQDVMAVR------GHSDKVMAAAFQRLRCTRTFDLFELLSLLEITKSSI-DSRSDPFYESLKLITVDSLTAVVSPLLGG-QQTEGHGLMMHLARSLKALAVEYSVAILLTNNQVRG-----DGTQRKPALGRTWSHVPHCRLLLTHDRSDDA-------------SLQTPSHQIRREAKLIKSGRQPINVSCTFKIDDAGI 321
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: UPI0018D9AD9F (DNA repair protein RAD51 homolog 4-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9AD9F) HSP 1 Score: 111 bits (277), Expect = 8.740e-24 Identity = 87/281 (30.96%), Postives = 130/281 (46.26%), Query Frame = 0
Query: 154 VTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGI-GVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGV 433
++TG LD LL GL + E+ G + GKTQ LC+T A + A+ VLY+DT G S +R+Q I +R + + M A RLR R FD+ + S L+ + G D Y+ +LV++DSVTAVV+P+LGG + GHG+M L L A + S VL+ N+ V + + ALG TW VP R+LLT + ++ + + A+++K QP + F+I D G+
Sbjct: 82 LSTGCSSLDELLDGGLYTSELTEITGGPATGKTQ---------------LCMTTAASVATTAQQNVLYIDTNGGFSSQRLQDIMAAR------GNTDKIMAAAFQRLRCARTFDLFELLS-LLEMTKSSMDSGSDAFYASLKLVVVDSVTAVVAPVLGG-QQTEGHGMMIHLARSLKALAVEYSVAVLLTNNQVRG-----DGTQRKPALGRTWSHVPHCRLLLTHDRSDDA-------------SLCTVNRPINREARIIKSGRQPINVSCTFKIDDSGI 321 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig203.21.4 ID=prot_P-littoralis_Contig203.21.4|Name=mRNA_P-littoralis_Contig203.21.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=439bpback to top |