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Homology
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: D8LQZ5_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ5_ECTSI) HSP 1 Score: 503 bits (1295), Expect = 3.180e-170 Identity = 309/423 (73.05%), Postives = 335/423 (79.20%), Query Frame = 1
Query: 157 MPRLDRMGLDKRTLGVLASLPVPITLAESLLSRDSEQLALECGVSLRAVNKLRYLVALRCQPQPPVPDRRPSDSQENDGVPHE-----EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASRLLPSSSFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQ 1410
MPRLDRMGLD+RTLGVLASLPVPI LAESLLSRD EQLALECGVS++AV+KLRYLVALRCQPQPPVPDRR + + P+ EG XXXXXXXXXXXXXXXXXX XXXXXXXXX P SF SAD+LYRQA++VGGFVTTGSD LDNLLCKGLMLHHVVEVVGRSS+GKTQ LCLTAAVAAASHGIGVLY+DTANGCSVRRMQQIARSRYADA+GEM+ARQMDALLDRLRVVRAFDISRV SALVAYIDGV EGGR+G+YS CRLVILDSVTAV+SPLLGG KNPAGHGLMASLGHLLNRAA+QCSACVLVANSTVA R + E+EGPRAALG+TWEGVPSIRVLL +++ G G +A +TA LLKHPAQ
Sbjct: 1 MPRLDRMGLDERTLGVLASLPVPIVLAESLLSRDPEQLALECGVSMKAVSKLRYLVALRCQPQPPVPDRRAPEDNGDGATPNTQGHGGEGKRGAGSSTXXXXXXXXXXXXXXXXXXSPRRIGXXXXXXXXXXXXXXPPLLSFESADALYRQARDVGGFVTTGSDSLDNLLCKGLMLHHVVEVVGRSSSGKTQ---------------LCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVVRAFDISRVMSALVAYIDGVMEGGRNGVYSDCRLVILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLVANSTVAPR-GISEEEGPRAALGLTWEGVPSIRVLLAEASAAAGGASGSGDAGGADHGTVG--EASPRTATLLKHPAQ 405
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A6H5L2A5_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A5_9PHAE) HSP 1 Score: 248 bits (632), Expect = 6.940e-75 Identity = 125/139 (89.93%), Postives = 135/139 (97.12%), Query Frame = 1
Query: 763 LCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLV 1179
LCLTAAVAAASHGIGVLY+DTANGCSVRRMQQIARSRYADA+GEM+ARQ+DALLDRLRVVRAFD+SRV SALVAYIDGV EGGR+G+YS CRL+ILDSVTAV+SPLLGG KNPAGHGLMASLGHLLNRAA+QCSACVLV
Sbjct: 14 LCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMAARQVDALLDRLRVVRAFDVSRVMSALVAYIDGVMEGGRNGVYSDCRLIILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLV 152
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A835YM23_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM23_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.260e-34 Identity = 116/338 (34.32%), Postives = 150/338 (44.38%), Query Frame = 1
Query: 553 PSSSFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGV-TEGGRDGIYSKC------------RLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGP---------------------RAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVV-FEIGDGGVID 1461
P + F SA + YR A GG + G +D LL GL L V EVVG++ AGKTQ LC++AA AAS GIGVLY+DT NGCS RR+Q+IA +R A+ A L + + R + ++ V +AL DG+ T R I + RLVILDS AV++PLLGG N G +A+L L+ A S VLV N VA R RAALG W P++R+LL AQ+G + A L KHP + CG F +G GV+D
Sbjct: 78 PLAIFESAAARYRYAMRQGGLLQMGCSSIDGLLGGGLALQQVTEVVGQTGAGKTQ---------------LCMSAAAVAASSGIGVLYIDTTNGCSPRRLQEIAAARGGSAAAP-------AALSHITIERCYSLANVLAAL----DGLATRLVRTPIATAAXXXXXXXXAHAIRLVILDSAAAVLAPLLGGEGNAPGAAALATLAAALSHTALSLSVAVLVTNGAVADRAPXXXXXXXXXGSRGFGXXXXXXXXXXXXKRAALGARWAAAPAVRLLLDGGAQSG------------------------RVAVLDKHPLRACGGAAARFAVGGAGVVD 365
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A4X2LHD2_VOMUR (DNA repair protein n=2 Tax=Vombatus ursinus TaxID=29139 RepID=A0A4X2LHD2_VOMUR) HSP 1 Score: 114 bits (285), Expect = 4.380e-24 Identity = 101/300 (33.67%), Postives = 134/300 (44.67%), Query Frame = 1
Query: 556 SSSFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCL-TAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGG 1452
S F AD LY + K + TG LD LL GL V E+ G ++GKTQ +CL TAA A S G VLY+D+ G + R+ Q+ ++R D + A L R+ VVR FDI ++ A +++ + ++V++DSV+AVVSPLLGG ++ G LM L L A + VLV N R E R ALG +W VPS RV L A+ G G + A + A L K P QP G V EIG G
Sbjct: 63 SFPFNGAD-LYEELKTSTAILATGIASLDKLLDSGLYTGEVTEITGPPASGKTQ---------------VCLCTAASVAYSLGQSVLYIDSTGGLTASRLLQLLQARTEDEEEQAGA------LQRIHVVRVFDIFQMLDAFQDLRGSISQQATNAS-GPVKIVVVDSVSAVVSPLLGG-QHSEGLALMMQLARELKTLARELGIAVLVTNHVTRER----ESGKLRPALGRSWSFVPSTRVFL--EAREGPG-----------------APAGCRVASLTKSPRQPTGIQEVMEIGSCG 315
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A287D3P6_ICTTR (DNA repair protein n=6 Tax=Sciuridae TaxID=55153 RepID=A0A287D3P6_ICTTR) HSP 1 Score: 114 bits (284), Expect = 6.040e-24 Identity = 101/290 (34.83%), Postives = 132/290 (45.52%), Query Frame = 1
Query: 583 LYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGI--GVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGP-RAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIG 1443
LY + K ++TG LD LL GL V E+VG +GKTQ LC+ A VA HG+ VLY+D+ G + R+ Q+ + R D + A L R++VVRAFDI ++ L VT+ R ++VI+DSVTAVVSPLLGG + G LM L L A + S V+V N D D G + ALG +W VPS R+LL TG AS + +T L K P QP G V +IG
Sbjct: 71 LYEEMKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC-------------LCVAANVA---HGLQQNVLYIDSNGGLTASRLLQLLQPRTQDEEEQARA------LQRIQVVRAFDIFQMLDVLQDLRGTVTQQVRCSS-GTVKVVIVDSVTAVVSPLLGGQQRD-GLALMMQLARELKTLARELSMAVVVTNHMT-----RDRDSGKFKPALGRSWSFVPSTRILLDIIEGTG------------------ASGSSQRTVSLTKSPRQPTGFQEVVDIG 313
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: UPI00049064F1 (DNA repair protein RAD51 homolog 4 n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=UPI00049064F1) HSP 1 Score: 113 bits (283), Expect = 8.630e-24 Identity = 97/295 (32.88%), Postives = 135/295 (45.76%), Query Frame = 1
Query: 583 LYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGI--GVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRD--GIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGP-RAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGG 1452
LY + K ++TG LD LL GL V E+VG +GKTQ LC+TA VA HG+ VLY+D+ G + R+ Q+ ++R D + +A L R++V RAFDI ++ L + V + G ++V++DSVTAVVSPLLGG + G LM L L A V+V N D D G + ALG +W VP+ R+LL+ + ++G AS+ TA L K P QP G V +I G
Sbjct: 71 LYEELKSSTAILSTGIRSLDKLLDAGLYTGEVTEIVGAPGSGKTQVC-------------LCVTAHVA---HGLQQNVLYIDSNGGLTASRLLQLLQARTQDEEEQAAA------LQRIQVARAFDIFQMLDVLQDFRGTVAQQSLQVTGSSGTVKVVVVDSVTAVVSPLLGGQQRE-GLALMMQLARELKTLARDLGLAVVVTNHVT-----RDRDSGKLKPALGRSWSFVPNTRILLSTTEESG------------------ASERSWCTACLTKSPRQPTGVQEVIDIATWG 319
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A1Y1HKY4_KLENI (DNA repair protein RAD51 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKY4_KLENI) HSP 1 Score: 113 bits (282), Expect = 1.450e-23 Identity = 92/307 (29.97%), Postives = 145/307 (47.23%), Query Frame = 1
Query: 562 SFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASH-GIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDIS---RVTSALVAYIDGVT-----EGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGV 1455
++T +L+ + V+TG +D+++ GL + E+VG S++GKTQ LCL AA AAA V ++DT+N S R+ QI + +++ + R+ +AFDI R+ L+ ++DG +G + + K +L+ILDS +A++SP+LGG + GH LM SL LL + A + + VLV N TV+ E P+ ALG +W+ VPS+R+ L A E SD T T + KH CG +V + + G+
Sbjct: 63 TWTDGATLFERLTTSTTLVSTGCPSIDDVIGGGLRPGTITELVGTSASGKTQ---------------LCLQAAAAAALELRASVAFIDTSNSFSAHRLAQIVTGLHGKDKFVEHKQELRNVARRVLCFKAFDIYTALRLLDDLLVHMDGAESKRGGDGNQGDFFQKLQLLILDSASAIISPVLGGA-HTQGHALMVSLSGLLRQIALKHNIAVLVTNHTVSG-----EGGRPKPALGESWKSVPSVRLAL---------------------AREDESDCCTAT--VTKHTIGACGESVPYVLSRDGL 325
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: UPI0018F4FA24 (DNA repair protein RAD51 homolog 4 n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F4FA24) HSP 1 Score: 112 bits (280), Expect = 1.710e-23 Identity = 93/292 (31.85%), Postives = 131/292 (44.86%), Query Frame = 1
Query: 583 LYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGIG--VLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGG 1452
+Y + E + TG GLD +L GL V E+ G +GKTQ +CL AA A+ +HG+G VL++D+ G + R+ Q+ R+R D + A L R+RVVR+FD V AL ++ G D ++V++DSV+AV+SPLLGG + G +M L L A + V+V N R E PR LG +W VPS RV+L EGA +TA+L K P QP G ++ G
Sbjct: 71 VYEELAETTAILPTGLPGLDQILDSGLYTGEVAELTGAPGSGKTQ---------------VCLCAA-ASVAHGLGRDVLFVDSTGGFTATRLLQLLRARTRDEEEQAGA------LRRIRVVRSFDAFGVLDALQDLRGSFSQQGMDAA-GPVKMVVVDSVSAVISPLLGG-RQSEGLAVMMQLARELKTLAREFGVAVMVTNHVTRDR----ETGRPRPGLGRSWSFVPSTRVVL-----------------------EGAGPR--RTARLAKSPRQPTGIQEALDLDSWG 309
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A8B7Y1H2_ACAPL (DNA repair protein RAD51 homolog 4-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y1H2_ACAPL) HSP 1 Score: 111 bits (278), Expect = 3.310e-23 Identity = 93/283 (32.86%), Postives = 128/283 (45.23%), Query Frame = 1
Query: 616 VTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAV---AAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGV 1455
++TG LD LL GL + EV G + GKTQ LC+TAA AAA VLY+DT G S +R+Q + R S + M A RLR R FD+ + S L + + D Y +L+ +DS+TAVVSPLLGG + GHGLM L L A + S +L+ N+ V + + ALG TW VP R+LLT + +++ S + AKL+K QP + F+I D G+
Sbjct: 82 LSTGCTSLDELLDGGLYTSELTEVTGGPATGKTQ---------------LCMTAAANITAAAQQN--VLYIDTNGGFSSQRLQDVMAVR------GHSDKVMAAAFQRLRCTRTFDLFELLSLLEITKSSI-DSRSDPFYESLKLITVDSLTAVVSPLLGG-QQTEGHGLMMHLARSLKALAVEYSVAILLTNNQVRG-----DGTQRKPALGRTWSHVPHCRLLLTHDRSDDA-------------SLQTPSHQIRREAKLIKSGRQPINVSCTFKIDDAGI 321
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: UPI0018D9AD9F (DNA repair protein RAD51 homolog 4-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9AD9F) HSP 1 Score: 111 bits (277), Expect = 4.480e-23 Identity = 87/281 (30.96%), Postives = 130/281 (46.26%), Query Frame = 1
Query: 616 VTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGI-GVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGV 1455
++TG LD LL GL + E+ G + GKTQ LC+T A + A+ VLY+DT G S +R+Q I +R + + M A RLR R FD+ + S L+ + G D Y+ +LV++DSVTAVV+P+LGG + GHG+M L L A + S VL+ N+ V + + ALG TW VP R+LLT + ++ + + A+++K QP + F+I D G+
Sbjct: 82 LSTGCSSLDELLDGGLYTSELTEITGGPATGKTQ---------------LCMTTAASVATTAQQNVLYIDTNGGFSSQRLQDIMAAR------GNTDKIMAAAFQRLRCARTFDLFELLS-LLEMTKSSMDSGSDAFYASLKLVVVDSVTAVVAPVLGG-QQTEGHGMMIHLARSLKALAVEYSVAVLLTNNQVRG-----DGTQRKPALGRTWSHVPHCRLLLTHDRSDDA-------------SLCTVNRPINREARIIKSGRQPINVSCTFKIDDSGI 321
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D8LQZ5 |
| Preferred name | RAD51D |
| PFAMs | Rad51 |
| Model size | 2133 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K10871 |
| KEGG Pathway | ko03440,map03440 |
| Hectar predicted targeting category | signal peptide |
| GOs | GO:0000003,GO:0000150,GO:0000217,GO:0000228,GO:0000280,GO:0000400,GO:0000707,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000730,GO:0000781,GO:0000784,GO:0002831,GO:0002833,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008092,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0015630,GO:0015631,GO:0016043,GO:0016444,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0022607,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032101,GO:0032103,GO:0032200,GO:0032991,GO:0033061,GO:0033063,GO:0033554,GO:0034622,GO:0034641,GO:0035825,GO:0036297,GO:0042148,GO:0042592,GO:0042623,GO:0043015,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043900,GO:0043902,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044454,GO:0044464,GO:0045003,GO:0046483,GO:0048285,GO:0048518,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051276,GO:0051321,GO:0051716,GO:0051726,GO:0060249,GO:0061982,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071824,GO:0071840,GO:0080134,GO:0090304,GO:0090735,GO:0097159,GO:0098687,GO:0140013,GO:0140097,GO:1900424,GO:1900426,GO:1901360,GO:1901363,GO:1903046 |
| Exons | 12 |
| Evalue | 2.01e-175 |
| EggNOG OGs | COG0468@1|root,KOG1433@2759|Eukaryota |
| Ec32 ortholog description | DNA recombination and repair protein Rad51, C-terminal |
| Ec32 ortholog | Ec-07_002220.1 |
| Description | recombinase activity |
| Cds size | 1317 |
| COG category | L |
| BRITE | ko00000,ko00001,ko03400 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789994.1409452-UTR-P-littoralis_Contig203:89087..89179 | 1680789994.1409452-UTR-P-littoralis_Contig203:89087..89179 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig203 89088..89179 + |
| 1680789994.1556425-UTR-P-littoralis_Contig203:91148..91212 | 1680789994.1556425-UTR-P-littoralis_Contig203:91148..91212 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig203 91149..91212 + |
| 1680789994.29257-UTR-P-littoralis_Contig203:104130..104790 | 1680789994.29257-UTR-P-littoralis_Contig203:104130..104790 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig203 104131..104790 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789994.1666844-CDS-P-littoralis_Contig203:91212..91291 | 1680789994.1666844-CDS-P-littoralis_Contig203:91212..91291 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 91213..91291 + |
| 1680789994.177579-CDS-P-littoralis_Contig203:92362..92466 | 1680789994.177579-CDS-P-littoralis_Contig203:92362..92466 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 92363..92466 + |
| 1680789994.1872046-CDS-P-littoralis_Contig203:92913..93209 | 1680789994.1872046-CDS-P-littoralis_Contig203:92913..93209 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 92914..93209 + |
| 1680789994.2036645-CDS-P-littoralis_Contig203:95063..95190 | 1680789994.2036645-CDS-P-littoralis_Contig203:95063..95190 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 95064..95190 + |
| 1680789994.2168162-CDS-P-littoralis_Contig203:96169..96298 | 1680789994.2168162-CDS-P-littoralis_Contig203:96169..96298 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 96170..96298 + |
| 1680789994.226832-CDS-P-littoralis_Contig203:98964..99081 | 1680789994.226832-CDS-P-littoralis_Contig203:98964..99081 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 98965..99081 + |
| 1680789994.2367034-CDS-P-littoralis_Contig203:100952..101049 | 1680789994.2367034-CDS-P-littoralis_Contig203:100952..101049 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 100953..101049 + |
| 1680789994.24655-CDS-P-littoralis_Contig203:102064..102135 | 1680789994.24655-CDS-P-littoralis_Contig203:102064..102135 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 102065..102135 + |
| 1680789994.260878-CDS-P-littoralis_Contig203:103042..103091 | 1680789994.260878-CDS-P-littoralis_Contig203:103042..103091 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 103043..103091 + |
| 1680789994.2720459-CDS-P-littoralis_Contig203:103547..103732 | 1680789994.2720459-CDS-P-littoralis_Contig203:103547..103732 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 103548..103732 + |
| 1680789994.2818084-CDS-P-littoralis_Contig203:104067..104130 | 1680789994.2818084-CDS-P-littoralis_Contig203:104067..104130 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig203 104068..104130 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig203.21.4 >prot_P-littoralis_Contig203.21.4 ID=prot_P-littoralis_Contig203.21.4|Name=mRNA_P-littoralis_Contig203.21.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=439bp
MPRLDRMGLDKRTLGVLASLPVPITLAESLLSRDSEQLALECGVSLRAVN
KLRYLVALRCQPQPPVPDRRPSDSQENDGVPHEEGGGDDGTNGGGENATT
PLTTARRRRGADEREREGAGGGNGSSGASRLLPSSSFTSADSLYRQAKEV
GGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESP
AGLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSAR
QMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDS
VTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRR
AMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYGSGSGGGGGGAVE
GASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGVIDVQD* back to topmRNA from alignment at P-littoralis_Contig203:89088..104790+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig203.21.4 ID=mRNA_P-littoralis_Contig203.21.4|Name=mRNA_P-littoralis_Contig203.21.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=15703bp|location=Sequence derived from alignment at P-littoralis_Contig203:89088..104790+ (Pylaiella littoralis U1_48)
GATAGATTGTGCGTTGTGAGGAAGACATCCAACGTCACTGGCTGCTGTGG
TTGATCCAACTAGAGTGCGCGTGCCGGCACGCCAACGGAAAGGTGGGGCT
TTACTTGACGTGTAAGTCTCTTCGCTACACTGCTGTAATGATGCGTTACA
TCGCATCCACAGCTACTGCTGTACCCGCTCTGAATCCTCCTCACCGGTAC
TTCCACAGACGAACCGACCTCCTGCTTTATACGCTGCGCTGCAGGATCAA
GTGCGAATCGTCTGTGTATAGCCGCGGAGAATACCCTCATTAAAAACAAA
ATCCTGCGCTGTAGGATCGAGTGCGAGTGCTTCGTAGAGAACCCTTAGCA
TGCGCCGGTCTCGCTCATTGCCTCACTAGTACAAGTTCCGAGATTTACCC
CGCACAGCGATGGTAAGAAAAATTGCCCCGCACCCCGCACACCGATATTC
CGACATTTGGGGAGAAAACTGCTGATTTTTTGTGTTTTCTGTTTTCGCAA
TGTGTATGTATGTTCACGTATCGTATCAACATACTCTGTACCAAGTGCAT
CATTCCTTTCCGGATCCACTCTAGATCCTCGTTCTAGAGAGACGATGAGA
CTCGAGCGCACTTCTCCTTTGAATTTGCGTGTGTATGATACGTATGGTAC
AGAACACTGCCTTACGCCTGCATGTACTGAAAGCTCGGGCCGCCACAGAA
GTAATCCAAGGTAAAACTACGCATGGTACTGCGCTGTCTGCTGTTTTCCT
CATCCCATCGATACTCCAGTCGAGAGGCAATACTGCACTGTCTGTTGGGG
ATCCGGTGCTTCAGATCTGGGAGGTTTGAGTGAAGCATCTAGACGGCACG
TCGATGCATTTCCCGGTCCCATCATCTGCGCCGCAGTCTAGGAAAAATAT
GATCCTAGCCCCAGCGCGGCCGAATGAAATAACGCACGTATGGTATGATA
CCACAGACATGTGAAAATATTCAGGTAGAAAAAAAAGGGTATATTATCGT
CTTGTTGTACTATATCATAGGTATGATTTGCATGTGCAGCAGCAGCAGCA
GCATTACAAAAGCAACAATCGTGACCTTCCTTCTGTGTTTGACCCCGGGC
GGATGCGCGCGCATACTGCTGTAGCCCGACAGTGGAGACTACCGTAGGTT
GCATAACAAGATATCACAATTTCGTAAGATATGACACCCTCTCCGAAAAG
TAAAAGTTACAATTGAAAAGTTACACAGCAGTTCCACACACCCGTGTGCG
ATTTTTTTTCATCCCGAAAACAGGGTGACAGAAGATACCACACCCCCCCC
GTCAAAGTGAAAATTACACAGCAGTACCACACCGGTGTGATGTTTTTTAC
AAACCCAAAATGTCATCACACCGGTGTGATTTCTTATGCAACCTACGGTG
GCGTCCAGGATAGATGCGTCCAGGATAGATAGGAAGCACCACACTCGCAC
TCGGCGTGACAGCAGTAGTTAAGTCATGGTTGCGGCGGAGTGCCGTGTTA
AGAACACCTCTCTAATGTCAAAACACGTAAAAGTCGCGCCTGTCATCAGA
AGACGTGTGTTTCAATTTCTGTAAGCCATTTTGACCTGGCCGTTGTCGCA
AGCACATTTACCTCTGTTCACCCTCGACCACGACCGCCGTCGCCCATCAT
ATCATCATCGATCGTAGAATTGACGATTGGTAGCACCCCCCCCCCCTCCC
CCCCCTTAAGGCCGATATTCAAATGTTCTCCGCCGATTACTCCGCGACAG
AGTTTGTGCCAACATCCAGCCCTAAGCATGGGGGGGGGGGGTCGTCAGCT
TCCATCCCCACTACCGGTTGTACCATTTACATCGAAGCGTCCACTCGTCA
ACATGTTCATTGCCGTCACCTTTTCCCTCCCCCCTCCCTTACACCTCCTG
CGCAGGATGGCCATATAAAGACTCAGGTTTTGCAAAAAATGCGAGCACAG
CAGTCTCTTTCCATCCCACCTGCTGCTGTAGTATGAGACCACACAGCGAA
CCTCCTCGTCATATTCTCAAACGCATTTCGATTATCGCCCCCATCCCCGT
CACAACTTCAGGAGTGACACGAACAAGGTTGTTCTCTTCAGAGCCGGTGG
GACAGACAGCAAGGTGGGGTGGGGGATGCCTCGACTGGACCGAATGGGAC
TGGACAAGCGCACGCTCGGAGTCCTTGCGTCCCTGCCAGTACCCATCACG
CTAGGTATATAGGGGCCGCAGTAGAGAGCAGGGCGTCTCCGGGCAAGCAG
TAGGGAGCAGGTTATGGTTGGATATGACCGCCTCACGCTGAAATAAAGTG
CGCAACACTGTTTGACTATGTTCTCATCCGGTGAGACGAAAACCTTCCGC
CGAAATTTAAATCCCCCCCACCCCGAAAGCAGCATTTTTTGGGGTGGCAA
GGGGTCGGGGGGGGGGGCTGGGTTACGAGCTGGCGGACAGTGCGAGTGCC
TTTCTGTTGTAGGGCTCACGCGTGCACATATGTACCACGCACGGGACGCT
CTCTTTTCTCTTGTAAGTTCTACTGTTTGTAGCAGCCGACCGTTTTGAAT
GAGCCACGAGCAGATAAGGACCAGGTACAGAGTACCTCGGAGATTGCTAA
CCTTTACTGTGCGAGAAAGGAGGCTGCTTGTTGTTTCGCTCGACCACCTG
TAGTCCCCCCCCCTCCCCCCCCCCGCCTCCCTTGTGTGTGTGGCTGCACC
CCCCCACCCCCCCCATCCCCCCTCTCCCGCCGCTGCGGCCGCCGTATGCA
GCCGCATGTAAACCAAATATACGGTAGAAACGGGAGAGAGATCAAACAAA
CATTGGCGGTGATCCTGCTATCATTATAAGGCACATCAACGAACGAACGG
TCTCTCGTCTCACAAAGATGGGGGTGCGTGACCCAATGAATGGTCAGATA
AACGGCTGCTGGAAGGCAAGCGACAGGGTAGTGTTATGGTACCCCGACAC
TCTCCGTCCGTTTGGTAGTTAGGGTTAGGGTTAGGGTTAGAATGAGATCA
CACATTAGTCACTTGCCGCTCTCATGTTGCACCAATCAATCGCTTGTGCT
GCAGCAGCATCGTACGCCTGTTTCGTGTTGTTTTTGCCGACGCACGCAAT
AACAACCAACAACAACCTGACGTCCGGGTGATGTATCTATCCGCTCGCGA
CGGCGAAGGAGAATCTCCGCTCACTCGCAATCGTAAAATGAAATTTAATT
TTACCCCCCGCATTTTGCGATGAAAATGATCCCCACCGTGGCGGCGGCGG
CGGCGGTGGCGGCGGCGGAACGCAGCGGAGTCTCTGCTCTCGCGTGACTC
GGAACAGCTTGCCTTAGAGTGCGGGGTCAGCCTCAGGGCCGTCAACAAGC
TTCGCTATCTCGTCGCTCTCCGATGTCAGGTACAGCAGTACAGCAGTACA
GCAGGACCGGTTCGCGGTTCGCTCGGGTTGCGGCGCCGCGCACGCGCCGC
AGTGGCGCCCGCCTCCCCCCAACCCTCCCACCCCGTGAATGTGTCCACGT
GTACTGTTGCTGCTGCTGCTGCTGCTGCTGCTACGGCGGCGGCGGCGGCG
GCTGTTCAAAAACAACCAAGACACTTTCGCCGTCGGAGTTTAAAACGACA
GTCCAGAGAGTAGTTACGGCGTGTGCCCTGCGGCTGCTGTTAAAACACAA
CCAACAAACTTTGGCTGTGGAACGTGTTCAAAATAACAGTCCAGAGAGTA
GCAATGGCGTGTGCCCTACCCTACCCTACCCCCCCCCCCCCCCTCGCCCC
AGCCCTGGATCTACTCTGCTGCCCATTCAGCACCCAGCACCCCCCGCCCC
CGCCCCCCCCGCGCGATCGATCCCAGCCTCAGCCGCCCGTTCCTGACAGG
AGACCCTCGGATTCGCAAGAGAACGACGGAGTTCCACACGAGGAGGGGGG
CGGAGACGACGGCACGAACGGCGGTGGCGAAAACGCAACAACTCCTCTGA
CAACGGCCAGGCGAAGAAGGGGCGCCGACGAACGTGAACGCGAAGGGGCA
GGGGGAGGGAATGGATCGAGCGGCGCTTCCCGGCTGCTGCCGTCGTCGTC
TTTCACCTCCGCGGACTCCCTGTACCGGCAGGCGAAGGAGGTGGGAGGGT
TCGTGACCACGGGCTCGGACGGGTGAGGAGCCCTGCCTGCCACATGGTTG
ATAGATGAGACACACCCTAAATTACTGCGCGTACGTATACTGTAGTATGA
CAGTGTTTCTTTTGTTGCCCATTCCAAAACACGCGCAATTATGGCATATG
ATGCTGCTGTTGCATGATGTGATACTGCTGTGTCATTCATACCTTTAGCA
TCAATCGCGTGGCGCGGGGGGGGGGAGAGGTGTGGGAACGGTGTGCAAAT
TTTCGCTGGAGTGGATCGGTGTGCTGGTCACAACAAGGGACCAAACCACG
CACGCAGTGGCGTACAAGACTGCATTTGAATGAGGACACAGAATACCTCT
GCATGAGGAGAGCCCTCCGCGCTTGTCGGCAACGACACGAATTACTCCCA
GCAGGGCCACAGCAGTAGTGACCGCAGAAATTTGTTGTCGATGATAGTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATTCTCACA
TTAGCTCACCACCACCACCAGTCTAGCCCGTGGTAACAAACCAGGCACAT
GTCGTGCTTTATTAGAGGAAAATATAGTGAAAAGGAAATAAGCGATGGTC
ACACAATGAAAATCAGGTATGATACTGTACCGCTTGGGGTGGTGGCCAAA
ATTAAAAAAATACAGTCCTGAAATACTAAAATACTGAAATACTAAAATAC
CAAAAAACAATGATACAAAAATACTAAAATACAACATCTCGAAAAATACA
GAAACAAAAATTCGTAAACAGACGAGACCAAGGTGTAATGTACATACGTA
CGTACAGGAGCAGTATCGTGCTGGACGCTTACCCCGGACCAAGGAGACCT
TTCCGAAACGAAACGAAACCGTGAGCTGGGTCTTTCAAAAACCCCGGGCT
TGGCCGTACGTACGTAATACTCGGAGTATACACCAACGGCGGCACACGAG
GCATGATATCGAAAACGGAAAAAGGCCGCTCGTCGTTGCAGGAGGGAATG
GTACGGAACGCCTGCCTGCCTGCCTGCTTTGTGAAGCGCTTGAGAGCGTT
CCCATATTTTTAAGATTCATGGGATGTAAACCGTAGGCTGACTGGCGTGC
ACAAACGGTTTGTTCGCCCCTCCCCCCCGCCGCCCCGATTTTCCAAGCTA
GAGATCTACGGTACGCTGCGAAGAACCTTGACAGAGCACATACGCACGTA
TATATAATACACTTCGTATATATATAACGTTGGAAGGATCTCGCCACCGG
CTCTGCGAAAATATCATACCGATGTGCTGTTTTGGCTGTTGGTGCATACG
TCATCGCCGAGAGATCAAGCTTTGAACAATGGACTTCCGGGGGTCCCGCG
ATATACGACGTCACCTTTCGGTGTGCGCCCGCCCGGCGGCCTCCGCCATG
CGCCCAATTTTCGCAGCAGGTGTCTCTAGCAGAGATTGCACCCGCGGCGT
GACATGTATTTTAGAGACCTCTCTGCTGTGTTGTATAGACAGGTTCGGAA
ACCACCCGGGGTCAGCATTGAGAACAAAACAGCAGCCGTGAGTGCGTGCG
TACCGCGTAGCGAACGTCACCTCCTGGCAATGCTCGTAGACCAGCCCCTT
TTTCCTACACACGCACACACACACATACCTCTTGCTTCCCTTCCGTTGCG
TGTTCTGTGTTCGGTGTCGACCGCATCCTCTCTTCAGAAGGCGGCCGGGC
CGCTCGGAGCAGCGCACGAGCTTTAACTTTTTCTGAACGACGAAGCTAGT
CCCCCACTTTTTTTTTTGCGTGCTCGTTGTTCTCCCGCCCCTTGCCCTTT
TGCCCTCTTGCGTTTCCATCCCGCCTCCGCCTCTCGCACGGCTCGTTGTT
CCTTCGTTCCTTCGTTGCTCGTCCAGCCTCGACAATCTTCTCTGCAAGGG
GCTGATGCTGCACCACGTTGTCGAGGTGGTCGGGAGGTCATCCGCGGGGA
AAACGCAGGCAAGGCAACGTGGACGTGGGTGGGCCGAGGAGTCACCGGCG
GGGGTACTCAATTGTTGCTTGCCGTCATGATGGTCATTTGGGACGAGGAA
TCTGACGAGTTTCTTCGGCAGCGGGTGATCGCGGTTGTTCATATCCCCGC
TTTTTGTACGATTACGCAGGAGGCGTTTGTTTGTTGTGGAAGACAAAAAA
TCACGAAAGTATACCCGGTACGTTTTTTGTTGTTCCACAACAGGCAGATG
CACCGCAACAACAACAACAACAGCAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACACTAATATATTTTTACTTTATTATT
ATTTCATTGAATTGATTATGTTTTTATAATAGTATTACTCCGTACGACGC
GCCGATGCTGTGGAAGTGTGTTTGAGTAAGTGGTGGTGATCATTCGCCTT
TCGAAACGTTCTCAGTAGAACGTTCTTGTTAATATGTTTGGAAATAATAT
GGTGTCGTGCGTGTTTGCATGGTTCCGAGGTTGATATGAAAAATCTTTGA
TACATAACAAATTCTACGAAGAAATAAAAAAACGGTTCCCTCTCTGTTTC
GGAAGCATATTCCTTCTTGAATGGGATAATCAAATGAAATGTCTTTCTGC
GGAACAATCAATCCTCTGGCGGGATGAATCAATCAACTCCCTGGGGAAAA
GAACCCCCGTTGGCGTTTGGCTGATTTCCCGGCCCGCCGACTGAATTGAT
CCGCAACCGATGCCTGCGTACACCCGCAAATCCTTCCCTTTTTCCTCCCT
TTCTCCCTTTCTCTCTTCCTTCCTTTCTTCGTTCCTCCCTTTCAATCCCG
TTTGCCGACAACCGAAATCAAAACTTTTTCAGCTGTGCTTGACCGCGGCT
GTGGCGGCGGCATCCCACGGCATCGGGGTCCTCTACCTGGACACGGCGAA
CGGCTGCAGCGTGCGACGGATGCAGCAGATAGCCCGCTCCCGCTACGCCG
ACGCCAGCGGGGTGAGCCGGTCTCGTCAACGCGACCCCGTTTAACACGTG
ACGGTTGACTTGAACGAAGTCTCTCCCTGTTGCGTGCATGCTTGAGATGT
CGAACGAACGAAGTGAGTGTCTCTACGAAACCCTTACCCTTTCGACATGC
CATATGATTTGTGCGCGTCCGGGATGCCGACGGAGTCAAGTATATTTTCG
AACCACCATCATTCGAAGGCGTTTGCTGCTTTGTGTGCTCCTTGCGACGC
CAGTGGAGACAGTCTCTCTGCACAGACAGCCCTTTCGACGCGTGATGATT
AGAAAGCTTGTGTTGTTGTTGTTGTGGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGATTCTCACATTAGCTCACCACTTTG
GTCTTTAGTAGCCCGTGGTCACAAACCAGGCACATATCGTGCAATGTAGG
AGGAAAAATAAAAGTAAAAAGGAAGTAAACGATGGTCACCCAAACAAAAT
CAGAAAGAGTACCGTTGGGGTACAATCTTACGAATGCTTGGGGTGGCAAC
AGATGGAGTCGCTCTACAAAATATCATCATTCGAAGGTTTTGTCGTGCAC
ATACTTCATCACAGGACGTAAACAGGGTTGTGAAAAATTATCAAGTTTTT
TAAGCGGACGGTTAAGAAATGAACCGTGTCGTCGGATGAGACAGGACTAC
TGCTGTTGCCCTGGTGTGTGCATTTGTATTTCTATTTCGGAGGCCCTGCG
TGCTGCTGCTGCTGCAGCACGCACGCAAACGAACACACAAGCACACAAGC
ACAAGCACAACACACACACACACACACACGCACATGAGCTACTTCGGCTG
CTGGCCCTGGCGTGGCCGCCGGTGCCGTCGGTGCTGCTCCCGCTCCGGGG
TTGGTGCGTGCTGCCGCTACCGGCACTCCACCTGATCTCCCCGGGGGTGC
TGCTGCGGGTCGCCCCTCTGCCGCCGCCGCCGCCGCCGCCGCGACTTCTT
CCACCGCCGCCACGATTTTTAAACCTGCCGCCGACGTTGATAGCCCGACT
GCGACCTCTACCACCGCCGCCACGACTTCGGCGACGGCTGCCGCTGTTGG
GAGCTCCACCGATGCCACCGCTGCGGCTTCCGCCTCCCCCGCCTCTAGTC
CCACGCTTACCGCCGCTGACCTTGCTCGTGCCAAACAGGCTCAAACCGAC
CTTCGCGCTGCCGAAACGGCTCTGGCCTCCACCGCCACCGTCGCCGTAGC
AACCGCCGTCGGCTCGAGGCCACTCGGCACCAGCGTGCTGCCGCCCTCGC
CAACCTCGAACAAGAGGCGCAACGCCAGCGCGACGCCGCTCAGCGCGCCT
TCTTGGCCGAACAAGCCATGGAGGCTCAACGCTTTTTCTTGGAGTACAAC
GCAATGACCGCAGCCAACGCCGCCCTTGAAGCGGAAAACCAGCGACTGCA
GGAAGGGATCGACGCCGCCGCTGCCGCCGCTGCCGCCGCCGCCACCGAGA
CCATCGACGACAACCCCGCCGCCACTGTCGCCGGTGTCGACGCCGCCGCT
GGCGTCGTCGCTTCCGCCACCACCGTCGCCTCTACCGCGCTTCCTCCAGT
GGTCCACACTTTTCCTTCCACTCCAGCCTCATGCACCTTCTGGGTCTACC
AGGCCTTCCGCTGCACCTTCCGGGTCTACAGGGCCTTCTGCCGCGCCTTC
TCGCTCTCCCGGGCCTTCTGCTGCACCTGCTGGGCTTTCTTCATGCTCAC
TACCAGAGGAGGTACAGTCAACGTTTACTTGCCTGTCCTCGCCAGCGGTG
CGGGGCCGTTTGTCCCGTTGGTCACGCACCGGCTCCCAAAGTTCAACACC
CGGGGGCGGCATCGGCAGCTTAACCTTTTACCCGAGTGAGGACCACACCT
CTTAACACACACACACTCGCACACACACAGCAGTTGTTCCCGTTGCATGT
ACAATGGGAACATCGAGCGAGCCACTTTTAATTTGTTTCCCCCCAACGTT
GGCGACGGTGGCACGCTCTATCCGCCCTCAAACCGCGGTACCTCCCGAGG
GGTCTGCCAGTCTCTTCCGCGTATCGAACGTGCCGCTCTGCTCGACTTGA
CCGCGCCGGAGCAGGAACGGTCGGAACGGTGTTCAGGTCGCAGGCAGCAC
GTACATACGTGTGATACCGCATCTCATCATGTGTATCATGTGTACTTCGT
AGCATTCATTTTGCGCGATACAGATGCCTCTCTCCCTCTCTTTTCTCTCT
CTCTTTATCTCTCTTTCTTCCTCTCTCTGCTACATACCGCACCACGCAAC
ACCCGCAACTCCCGTATACTAGAGCACTGCTGTTGTTGGCATTCACACCG
CGCTTGGTCTCGAAATTGACACACAATAGCCCGTATTGGTCAACGCTCAT
GATCAATGACGGCGGCATGCAACAACACTAGGAGAACCCCCGGCCCCTCG
GCCCCACGCCCCCCCCCACAAAAAAAAAAAAGAATAATTGTTTTTGCAGT
TTGTTCAAAAATGAAAGTTGCGCAAGATCTTTGAAAAGCCAACATTTTGG
TAAAAACCCATTCGTCCAAAAATATTTTCTTTTTATTCTCGGGTTATTTA
TTTGTCATTTTTTCGTCCCCTCTCCCCCCCCCGCCCCCCCTGCCTCCCCC
GGCCGATCTTCAACCTCGTTTCGACAGGAGATGTCGGCGCGGCAAATGGA
CGCCCTCCTGGACAGGCTTCGCGTGGTCCGCGCCTTCGATATCTCGAGGG
TCACGTCCGCCCTGGTCGCGTACATCGACGGAGTCACCGAAGGGGTGAGA
GAGAGAGAGAGAGAGACTGATAATGTGTTGCCTGCCTCTCGCACCCACTA
ATACCCCCCGAGGAGCGATTTTTTTTTTTTTATTACATTTGACGTATCTT
TGATACTGTATGTAGGTGTATGTAGGTCTGCATCTTGTGTTGTTGATTGT
TGTTGATTCTCACATTAGCTCATCGCCAAAATCTAGCCCGTGGTCACAAA
AAGTGCTGAGCCCTAGGAAGATCCAAAAAACAGAAAGAAACTTACAAGGG
AATACCCAAGAAAGACCGAAGAAGATGCACCTTGCTACGCGGTGTGCATC
GCTGAACTACAGCAGTCACAGCAGTACCAACATCAAACGTTCTTCAAGCG
TCGTTCATTTGACTACAACATCGTGTACAGTCTCCTCCCGCCCCACTTAT
AACTAATAACCTGCTGCTATAAGCAGTCAGTAGGTAGCTGCAAGACTACA
GCAGTTAGTTGCTGTCTGGAGTGCTGCCTGCAACGTCCAAGTAGCTCCGG
CAATCGGAGAAGACAGAAAAGAAAACACACAAAAAAAACACACACACGTA
TCATCAGATGTTGTCGAGGATGGTGTCTCCATGCCGTCCTTGCGACGCTG
GTGATGATGTCGCCCTAAACATGTCCTCCTTTTCTGGGTCCACGTTGCTG
TTGGCGTTGCCCAAGGCCACATCGCCAGCACCATGCTCTCGTAACGCTTC
TTCACTGCCGGCGTTGCCTTAGGTCACCTCCATCACCGCCGCTCTCTCAC
ATAACAGCTCTTTCTTGTTGTTCCTTTCCAATCAGTTCCCTAAAAAACTC
CACTGTGCACTTGAGGTACAAGTCTTCTGAAAAAAAAGTTCACGCTCGGA
GTGAGATCGACCAAGCTCTTCCCCGTTCGTCGCTGCTCGTCTACCTCCGT
CCTTGGCTGCGAAACTGGTTACTGGACGGCACAATCCCTCTGTGCATCCT
AGATCGTACCGTCTTTTCACCTGTGTGTGTGTCGTTCGCGTTCGTCGCAC
ACGTGCTCCCCTCCTGATGCGAACGTTACCGTTACCGCGTGCGCAGCAAT
CCGTCACGGACCGACGTACAGTACCTGACGCTGGCTGAAGAGATGATTAG
CTGCCTTACTTTTAATACTTCGAATGACTTTTTTTGTTGCTTTCGCTTCT
TCCTTTTTTTTTTTTTACTTTTACTGTTACTTTAACATTTATTTTTCTTA
CACGTACTTCTACTTTCACCTGTCTCCATACTTGGTCGTCCTTCTTCTTC
TGCTTTCCCCCCCCCCACCCTATTTTGGAGTGTTTTTCGTTTTCGTTTTC
CCGAGGGGCCAGGGAGAGAGAGATAGCCAGACGTGTTTCCGCACCGCATG
AGAACACGCACGCACACACGTTAACCGTCCTGTCACAAACCTATGACCCA
TGTGTGACCCCGACGGCTGGAGAGCAACAGACAGTACATTGACATTGAGT
TTACAGTACACCATTCCGCTTGGTGTGCTTCGGTTCACCAGGAACTACAC
TACTGCTGTAGTTTCATAAGCTCCGTCCGCCGTACGCGTCCTCTTGCATA
TCATACCTCCTCGAAGACAGACAGTTCCGGCTGGAACAATGGGGGTGCGT
GCTTTGGGGCGTTGGAGTCGCCTGACAAAAACAATCACTAACTCTACCCG
TGTCTTCCACTCTTCCCTCGTCGTCCTCCTCCTCCCCCTTGTCTCCCTCC
TCCTCCTCCTGCTCCTCCTGCTCCTCCTCCTCCCCCTCCTTCTCCTCCTT
CTCCTCTTCCTCCTCTTCCCCCTCTTCCCCCTCCCTCCTGCCTTTCCTCT
CTCCCCCCTCCCCCTGTCTTTGACCCCCCCGTTTTTTCCTTGCGCCGCAC
CAATCCTGAAACCAGGGCAGAGACGGCATCTACAGCAAGTGCCGGTTGGT
CATCCTGGACTCCGTAACGGCGGTGGTTTCTCCGCTTCTCGGGGGGGTCA
AGAATCCCGCTGGTGAGAAGTGACCACCAGTGACGTGCATCCCTGGTGGG
AATCAGGGGGCGGAGGGCAGACGTCCTCACTCGTTCGTGGCTCGCCCCAG
TCATTTTGACCATCGAGGCGTTTCTACTCCTCGTACTCCTCGTCACCGAA
GGTTTGGCGCTCGATACGCAGGATTTGGGAGGGAGGTCCCGCATTCTCCT
GTGTATATATCTTCGTGTTTTCAAGTCCTGGTTCGCAAAACCAGCAGCAG
CAACAACAGCAGCAGCAGCAGCGGTCGTGTGGTTTGTGTTGTGTTAGTTC
ACCATGGACGGGCTATGTGGATATATTTGTGATGATCTAAAGGTGTGACA
GATAACAACAGCAACAACAACGACAACAACAACAACAACAACAACAACAA
AAATATGGCCCCTCTCCACATTAGTGCGCGATACTTACACACGAAATGTA
CGTATCATACACCTTCGTATCGCAAGTATTCGTACGTTGTGATACTCTGC
GAATTGTGCGGAGTATATACTTTGTATTCTTTGTACCTTTTTTTTGGGTA
TGATCGGTACCTTGTGACCACGGAAAGCGTCCCCTATCGGATGAGTCAGC
TTTGCGAACATGAGACATTAGAAGGTACAGCAGTACTGAGCAGAGATCGG
AACGGTTTTGAAGTTAAAGACAAGACACACACACAACCCATCATTGCCAT
GCTTCTCTCCCCGGCTCGGCACCTCTTGCCCACTTCCGCTCACGTCGCTT
CTCGCTGAACGTTTCATTTTTTTAGCTCGTTGCCGCCCCCTCTCATCCTC
TCATCCCCTCCCCCAACCCCAACCCCGAACCTGCGCGATGCACGGAACGG
TACGGCACGGCACGGAACGGCACGGAACGGCACGGAACGGCACGGAACGG
CACGGAACGGCACGGAACGGCACGGAACGGCACGGAACGGCACGGGACGG
CACGGGACGGCACGGGACGGCACGGGACGGCACGGAACGGAACGGAACGG
AACGTACGAACCGTGTAAAAAAAAAAGGACACGGGCTGATGGCCTCGCTC
GGACATCTACTCAACCGAGCAGCGACTCAGTGCAGCGCGTGCGTGCTGGT
GAGTAGAGAGAGAGTTTTACCTCCTGACTCGGCTACCACTACGTACCACT
GCAGAGAGACTGATATGGCATAATAGTCGTTCCCTCACGGACGAGGGACC
AAGCACGAACATAACATAACAGGACAGACAGACAGGCAGGCAGGCAGGCA
GACAGACAAACAGACAGACAGACAGGCAAATACAAGCAATCGTGTTGTTT
TTTTCTCGTGGGAGCAGCGAGGATGCAGCGGTTGCGTCAATCGAACGTCG
CGCGCACTTGTGCATGAAGCCAGACAAGCCACGCCTCCAACCTCCTCCGG
AATAACAAGCCCATTTTTTTTTTTTTTTCGCTGACCACAAGAAGCAGTAA
AATAACAACGGTAGGCGAACAACGGTAGGCCATTCACGAGGGGAAACTCT
TTTGTATTTTCAGTTTTTGTTTTGTTTTTTACACGTCAAGCGGCCACGGA
CAGAGCATTCTGCCGATCGGTGGAGACCGGCCGACCAAAACAGCAGTGCC
CAAATCACGATTCCCCCACCTCTCGTGAGAACACAGGCAGCAGTAGTGCG
TTCGTTCTTTTCACAGTGCCGTGACGTCGATTTTTTTACTGTACCTCCAA
CTGCAACGATAGAGGACAGACAGACCATGCCCATGGTTTCGCCGATGCAC
AGCCACGCAGTTTGTTCAAGCGGCACGTTTTTGATTGTACCAGGTATGCA
TGATAGCTCTAGTTTTGTGTGTGCAATCGCGCGTGCCCCCCCCCCCCTTC
CCTCCACCCCCCGACCCCCCACCCCCCACCGCATTCCCCACCCATCTCGT
GGGTGGGTACTCACCGGCTGGCAACCTACAACTACATATATACGATACAT
AACTCCACAAATCCCCGGCCGCTCTTTTTGTTTCATCCTTTTTTTTTGAC
ATCAGGTGGCCAACAGCACCGTGGCCTCTAGAAGAGCGATGGACGAGGAC
GAGGGTGAGGCCCTGATTTCGCAGTATGATGTGATATGATAGCCGTAGTC
CGGGCTTATTTTCCGCGCTCAGCGAGTAAAGATTGGACGATGAAGCCTAC
CGGCGTCCTATCGTATCTACGTGCCGCACCGAGGGGTGCATCGCATCGAG
CGGTGCACGCGTGCCTGCAATACGGGGCGGGGCGCATCTCGTGGGTGTTT
GTTGTCGTGCTCCGAAGAAGAAACAGAAACGGCACACAACATACCGAAAT
CCGGAGGAAAACTACTGGTGGGCGTTCGTGCTGTGGTACGGTAGGCTCTT
TGTGACGATCCAATATAGAGCGAGAGCGGCCGTATCCGAAGAGCATGGAC
TGGAAGGCTTGCGCCCGCTGAACCCGCTGAATCCCCGTACCCTCGGTTTC
CCTCGCGGCCCCCCGGGACCGCGCCCCCCCCCCTCTCTGCTCTTCCCGCT
TCCTCTGCAGGGCCCAGGGCCGCTTTGGGCATGACTTGGGAAGGCGTCCC
GTCGATACGAGTGCTGCTCACGGACAGCGCGCAAACCGGGAGCGGCGGTT
ACGGTAGCGGTAGCGGCGGCGGCGGCGGCGGCGCGGTGGAAGGAGCTAGT
GATGCACACACCAAAACGGCGAAACTTCTGAAGCACCCGGCACAGGTAAC
ATGGGAGAAAATTGAGTCGGAGGCTTGTTAATTTTTTTATGATATTGCTC
TCAACGTGCTGATTTTTCCGACGAAAGATGAGAAAATACCTCTCCCATCA
TGTGTATTGTTTTATTGCCGGGTGTAAGTATGTGAATGGCGGCCAAGGAC
GACGGTCCGCATACATACCGCCCGGGCGTCTGGAACTGTCACCCACGGCT
AATAACTGCTGCTGCTGTTGTTGCTGCTGCTGCTGCCGTCTTTGCATTCT
TTCCCCCCCCCCCCTCCCTCCCTCCCTCGTTGTCTATCTCTCTGCTCCGT
CTGTTTGTCTGTACCTCTCTCTCGCCGCAGCCATGTGGAAATACTGTGGT
ATTCGAGATAGGTGATGGTGGGGTAATAGACGTGCAAGATTGAGAGTGCG
GGATGTGCCTAACACGGGTGGAGGGGTATGTGCGCGGTGTCGAAAGCCAA
AAACGTTAGAGCACGGTAAGAAAAGTGCTGTGATTCAAGAAGCCACAATA
GCACATACGTGTATCATATGATATGGTATAAATATAGACTTCGAAAAGTA
TGTACCATTACCTTCTATGTCGCATATTATAGCTCGACCTTTTTCTAGCT
GGAGTGCGGATGTCACGTAGTTCAAATTATGACAAGAAGTATGACTTCGC
CCCCCCCGCCCGGTATTGTTAAGGGGGGCCGCGGACGGGACCACAAACGG
CAGGGGCACGTGGACGTGTCTTATTTTCTTCTCTAGTTGAAACGTGCTGC
TCCTGCTCGTAAATGTTCCCGCTGGGTGGTTGTGTTTGCTGCTACTTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTTGCGTACAAGGGGGCACCGCACC
ATTACAGTATTTTTATTTTTCAAGAAAACAACTGTATGTATTGCCACGGG
AATAACGCGTGTGAAAAGCATGAGCGCGGCGGACTTGAGTGAGTGAGGGA
AACGGAGAGTGAGAGTGCCGCTTGGAAGGACAACCAGTCCTGTCACTCGG
TAACCGTTCACTTTTTTTTTTTTTTTCATCATCGTCGGACCATCGTCTGG
GAC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig203:89088..104790+ >mRNA_P-littoralis_Contig203.21.4 ID=mRNA_P-littoralis_Contig203.21.4|Name=mRNA_P-littoralis_Contig203.21.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1317bp|location=Sequence derived from alignment at P-littoralis_Contig203:89088..104790+ (Pylaiella littoralis U1_48)
ATGCCTCGACTGGACCGAATGGGACTGGACAAGCGCACGCTCGGAGTCCT
TGCGTCCCTGCCAGTACCCATCACGCTAGCGGAGTCTCTGCTCTCGCGTG
ACTCGGAACAGCTTGCCTTAGAGTGCGGGGTCAGCCTCAGGGCCGTCAAC
AAGCTTCGCTATCTCGTCGCTCTCCGATGTCAGCCTCAGCCGCCCGTTCC
TGACAGGAGACCCTCGGATTCGCAAGAGAACGACGGAGTTCCACACGAGG
AGGGGGGCGGAGACGACGGCACGAACGGCGGTGGCGAAAACGCAACAACT
CCTCTGACAACGGCCAGGCGAAGAAGGGGCGCCGACGAACGTGAACGCGA
AGGGGCAGGGGGAGGGAATGGATCGAGCGGCGCTTCCCGGCTGCTGCCGT
CGTCGTCTTTCACCTCCGCGGACTCCCTGTACCGGCAGGCGAAGGAGGTG
GGAGGGTTCGTGACCACGGGCTCGGACGGCCTCGACAATCTTCTCTGCAA
GGGGCTGATGCTGCACCACGTTGTCGAGGTGGTCGGGAGGTCATCCGCGG
GGAAAACGCAGGCAAGGCAACGTGGACGTGGGTGGGCCGAGGAGTCACCG
GCGGGGCTGTGCTTGACCGCGGCTGTGGCGGCGGCATCCCACGGCATCGG
GGTCCTCTACCTGGACACGGCGAACGGCTGCAGCGTGCGACGGATGCAGC
AGATAGCCCGCTCCCGCTACGCCGACGCCAGCGGGGAGATGTCGGCGCGG
CAAATGGACGCCCTCCTGGACAGGCTTCGCGTGGTCCGCGCCTTCGATAT
CTCGAGGGTCACGTCCGCCCTGGTCGCGTACATCGACGGAGTCACCGAAG
GGGGCAGAGACGGCATCTACAGCAAGTGCCGGTTGGTCATCCTGGACTCC
GTAACGGCGGTGGTTTCTCCGCTTCTCGGGGGGGTCAAGAATCCCGCTGG
ACACGGGCTGATGGCCTCGCTCGGACATCTACTCAACCGAGCAGCGACTC
AGTGCAGCGCGTGCGTGCTGGTGGCCAACAGCACCGTGGCCTCTAGAAGA
GCGATGGACGAGGACGAGGGGCCCAGGGCCGCTTTGGGCATGACTTGGGA
AGGCGTCCCGTCGATACGAGTGCTGCTCACGGACAGCGCGCAAACCGGGA
GCGGCGGTTACGGTAGCGGTAGCGGCGGCGGCGGCGGCGGCGCGGTGGAA
GGAGCTAGTGATGCACACACCAAAACGGCGAAACTTCTGAAGCACCCGGC
ACAGCCATGTGGAAATACTGTGGTATTCGAGATAGGTGATGGTGGGGTAA
TAGACGTGCAAGATTGA back to top
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