prot_P-littoralis_Contig203.21.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig203.21.4
Unique Nameprot_P-littoralis_Contig203.21.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length439
Homology
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: D8LQZ5_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ5_ECTSI)

HSP 1 Score: 504 bits (1297), Expect = 1.230e-174
Identity = 309/423 (73.05%), Postives = 335/423 (79.20%), Query Frame = 0
Query:    1 MPRLDRMGLDKRTLGVLASLPVPITLAESLLSRDSEQLALECGVSLRAVNKLRYLVALRCQPQPPVPDRRPSDSQENDGVPHE-----EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASRLLPSSSFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQ 418
            MPRLDRMGLD+RTLGVLASLPVPI LAESLLSRD EQLALECGVS++AV+KLRYLVALRCQPQPPVPDRR  +   +   P+      EG        XXXXXXXXXXXXXXXXXX      XXXXXXXXX      P  SF SAD+LYRQA++VGGFVTTGSD LDNLLCKGLMLHHVVEVVGRSS+GKTQ               LCLTAAVAAASHGIGVLY+DTANGCSVRRMQQIARSRYADA+GEM+ARQMDALLDRLRVVRAFDISRV SALVAYIDGV EGGR+G+YS CRLVILDSVTAV+SPLLGG KNPAGHGLMASLGHLLNRAA+QCSACVLVANSTVA R  + E+EGPRAALG+TWEGVPSIRVLL +++    G               G  +A  +TA LLKHPAQ
Sbjct:    1 MPRLDRMGLDERTLGVLASLPVPIVLAESLLSRDPEQLALECGVSMKAVSKLRYLVALRCQPQPPVPDRRAPEDNGDGATPNTQGHGGEGKRGAGSSTXXXXXXXXXXXXXXXXXXSPRRIGXXXXXXXXXXXXXXPPLLSFESADALYRQARDVGGFVTTGSDSLDNLLCKGLMLHHVVEVVGRSSSGKTQ---------------LCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVVRAFDISRVMSALVAYIDGVMEGGRNGVYSDCRLVILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLVANSTVAPR-GISEEEGPRAALGLTWEGVPSIRVLLAEASAAAGGASGSGDAGGADHGTVG--EASPRTATLLKHPAQ 405          
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A6H5L2A5_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A5_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 8.670e-78
Identity = 125/139 (89.93%), Postives = 135/139 (97.12%), Query Frame = 0
Query:  203 LCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLV 341
            LCLTAAVAAASHGIGVLY+DTANGCSVRRMQQIARSRYADA+GEM+ARQ+DALLDRLRVVRAFD+SRV SALVAYIDGV EGGR+G+YS CRL+ILDSVTAV+SPLLGG KNPAGHGLMASLGHLLNRAA+QCSACVLV
Sbjct:   14 LCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMAARQVDALLDRLRVVRAFDVSRVMSALVAYIDGVMEGGRNGVYSDCRLIILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLV 152          
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A835YM23_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM23_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.430e-36
Identity = 116/338 (34.32%), Postives = 150/338 (44.38%), Query Frame = 0
Query:  133 PSSSFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGV-TEGGRDGIYSKC------------RLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGP---------------------RAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVV-FEIGDGGVID 435
            P + F SA + YR A   GG +  G   +D LL  GL L  V EVVG++ AGKTQ               LC++AA  AAS GIGVLY+DT NGCS RR+Q+IA +R   A+         A L  + + R + ++ V +AL    DG+ T   R  I +              RLVILDS  AV++PLLGG  N  G   +A+L   L+  A   S  VLV N  VA R                              RAALG  W   P++R+LL   AQ+G                        + A L KHP + CG     F +G  GV+D
Sbjct:   78 PLAIFESAAARYRYAMRQGGLLQMGCSSIDGLLGGGLALQQVTEVVGQTGAGKTQ---------------LCMSAAAVAASSGIGVLYIDTTNGCSPRRLQEIAAARGGSAAAP-------AALSHITIERCYSLANVLAAL----DGLATRLVRTPIATAAXXXXXXXXAHAIRLVILDSAAAVLAPLLGGEGNAPGAAALATLAAALSHTALSLSVAVLVTNGAVADRAPXXXXXXXXXGSRGFGXXXXXXXXXXXXKRAALGARWAAAPAVRLLLDGGAQSG------------------------RVAVLDKHPLRACGGAAARFAVGGAGVVD 365          
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A4X2LHD2_VOMUR (DNA repair protein n=2 Tax=Vombatus ursinus TaxID=29139 RepID=A0A4X2LHD2_VOMUR)

HSP 1 Score: 114 bits (285), Expect = 7.510e-25
Identity = 101/300 (33.67%), Postives = 134/300 (44.67%), Query Frame = 0
Query:  134 SSSFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCL-TAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGG 432
            S  F  AD LY + K     + TG   LD LL  GL    V E+ G  ++GKTQ               +CL TAA  A S G  VLY+D+  G +  R+ Q+ ++R  D   +  A      L R+ VVR FDI ++  A       +++   +      ++V++DSV+AVVSPLLGG ++  G  LM  L   L   A +    VLV N     R    E    R ALG +W  VPS RV L   A+ G G                 + A  + A L K P QP G   V EIG  G
Sbjct:   63 SFPFNGAD-LYEELKTSTAILATGIASLDKLLDSGLYTGEVTEITGPPASGKTQ---------------VCLCTAASVAYSLGQSVLYIDSTGGLTASRLLQLLQARTEDEEEQAGA------LQRIHVVRVFDIFQMLDAFQDLRGSISQQATNAS-GPVKIVVVDSVSAVVSPLLGG-QHSEGLALMMQLARELKTLARELGIAVLVTNHVTRER----ESGKLRPALGRSWSFVPSTRVFL--EAREGPG-----------------APAGCRVASLTKSPRQPTGIQEVMEIGSCG 315          
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A287D3P6_ICTTR (DNA repair protein n=6 Tax=Sciuridae TaxID=55153 RepID=A0A287D3P6_ICTTR)

HSP 1 Score: 114 bits (284), Expect = 1.050e-24
Identity = 101/290 (34.83%), Postives = 132/290 (45.52%), Query Frame = 0
Query:  143 LYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGI--GVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGP-RAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIG 429
            LY + K     ++TG   LD LL  GL    V E+VG   +GKTQ               LC+ A VA   HG+   VLY+D+  G +  R+ Q+ + R  D   +  A      L R++VVRAFDI ++   L      VT+  R       ++VI+DSVTAVVSPLLGG +   G  LM  L   L   A + S  V+V N         D D G  + ALG +W  VPS R+LL     TG                  AS +  +T  L K P QP G   V +IG
Sbjct:   71 LYEEMKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC-------------LCVAANVA---HGLQQNVLYIDSNGGLTASRLLQLLQPRTQDEEEQARA------LQRIQVVRAFDIFQMLDVLQDLRGTVTQQVRCSS-GTVKVVIVDSVTAVVSPLLGGQQRD-GLALMMQLARELKTLARELSMAVVVTNHMT-----RDRDSGKFKPALGRSWSFVPSTRILLDIIEGTG------------------ASGSSQRTVSLTKSPRQPTGFQEVVDIG 313          
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: UPI00049064F1 (DNA repair protein RAD51 homolog 4 n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=UPI00049064F1)

HSP 1 Score: 113 bits (283), Expect = 1.520e-24
Identity = 97/295 (32.88%), Postives = 135/295 (45.76%), Query Frame = 0
Query:  143 LYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGI--GVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRD--GIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGP-RAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGG 432
            LY + K     ++TG   LD LL  GL    V E+VG   +GKTQ               LC+TA VA   HG+   VLY+D+  G +  R+ Q+ ++R  D   + +A      L R++V RAFDI ++   L  +   V +      G     ++V++DSVTAVVSPLLGG +   G  LM  L   L   A      V+V N         D D G  + ALG +W  VP+ R+LL+ + ++G                  AS+    TA L K P QP G   V +I   G
Sbjct:   71 LYEELKSSTAILSTGIRSLDKLLDAGLYTGEVTEIVGAPGSGKTQVC-------------LCVTAHVA---HGLQQNVLYIDSNGGLTASRLLQLLQARTQDEEEQAAA------LQRIQVARAFDIFQMLDVLQDFRGTVAQQSLQVTGSSGTVKVVVVDSVTAVVSPLLGGQQRE-GLALMMQLARELKTLARDLGLAVVVTNHVT-----RDRDSGKLKPALGRSWSFVPNTRILLSTTEESG------------------ASERSWCTACLTKSPRQPTGVQEVIDIATWG 319          
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A1Y1HKY4_KLENI (DNA repair protein RAD51 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKY4_KLENI)

HSP 1 Score: 113 bits (282), Expect = 2.570e-24
Identity = 92/307 (29.97%), Postives = 145/307 (47.23%), Query Frame = 0
Query:  136 SFTSADSLYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASH-GIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDIS---RVTSALVAYIDGVT-----EGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGV 433
            ++T   +L+ +       V+TG   +D+++  GL    + E+VG S++GKTQ               LCL AA AAA      V ++DT+N  S  R+ QI    +         +++  +  R+   +AFDI    R+   L+ ++DG       +G +   + K +L+ILDS +A++SP+LGG  +  GH LM SL  LL + A + +  VLV N TV+      E   P+ ALG +W+ VPS+R+ L                     A E  SD  T T  + KH    CG +V + +   G+
Sbjct:   63 TWTDGATLFERLTTSTTLVSTGCPSIDDVIGGGLRPGTITELVGTSASGKTQ---------------LCLQAAAAAALELRASVAFIDTSNSFSAHRLAQIVTGLHGKDKFVEHKQELRNVARRVLCFKAFDIYTALRLLDDLLVHMDGAESKRGGDGNQGDFFQKLQLLILDSASAIISPVLGGA-HTQGHALMVSLSGLLRQIALKHNIAVLVTNHTVSG-----EGGRPKPALGESWKSVPSVRLAL---------------------AREDESDCCTAT--VTKHTIGACGESVPYVLSRDGL 325          
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: UPI0018F4FA24 (DNA repair protein RAD51 homolog 4 n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F4FA24)

HSP 1 Score: 112 bits (280), Expect = 3.190e-24
Identity = 93/292 (31.85%), Postives = 131/292 (44.86%), Query Frame = 0
Query:  143 LYRQAKEVGGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGIG--VLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGG 432
            +Y +  E    + TG  GLD +L  GL    V E+ G   +GKTQ               +CL AA A+ +HG+G  VL++D+  G +  R+ Q+ R+R  D   +  A      L R+RVVR+FD   V  AL       ++ G D      ++V++DSV+AV+SPLLGG +   G  +M  L   L   A +    V+V N     R    E   PR  LG +W  VPS RV+L                       EGA     +TA+L K P QP G     ++   G
Sbjct:   71 VYEELAETTAILPTGLPGLDQILDSGLYTGEVAELTGAPGSGKTQ---------------VCLCAA-ASVAHGLGRDVLFVDSTGGFTATRLLQLLRARTRDEEEQAGA------LRRIRVVRSFDAFGVLDALQDLRGSFSQQGMDAA-GPVKMVVVDSVSAVISPLLGG-RQSEGLAVMMQLARELKTLAREFGVAVMVTNHVTRDR----ETGRPRPGLGRSWSFVPSTRVVL-----------------------EGAGPR--RTARLAKSPRQPTGIQEALDLDSWG 309          
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: A0A8B7Y1H2_ACAPL (DNA repair protein RAD51 homolog 4-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y1H2_ACAPL)

HSP 1 Score: 111 bits (278), Expect = 6.370e-24
Identity = 93/283 (32.86%), Postives = 128/283 (45.23%), Query Frame = 0
Query:  154 VTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAV---AAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGV 433
            ++TG   LD LL  GL    + EV G  + GKTQ               LC+TAA    AAA     VLY+DT  G S +R+Q +   R        S + M A   RLR  R FD+  + S L      + +   D  Y   +L+ +DS+TAVVSPLLGG +   GHGLM  L   L   A + S  +L+ N+ V       +    + ALG TW  VP  R+LLT      +             +++  S    + AKL+K   QP   +  F+I D G+
Sbjct:   82 LSTGCTSLDELLDGGLYTSELTEVTGGPATGKTQ---------------LCMTAAANITAAAQQN--VLYIDTNGGFSSQRLQDVMAVR------GHSDKVMAAAFQRLRCTRTFDLFELLSLLEITKSSI-DSRSDPFYESLKLITVDSLTAVVSPLLGG-QQTEGHGLMMHLARSLKALAVEYSVAILLTNNQVRG-----DGTQRKPALGRTWSHVPHCRLLLTHDRSDDA-------------SLQTPSHQIRREAKLIKSGRQPINVSCTFKIDDAGI 321          
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Match: UPI0018D9AD9F (DNA repair protein RAD51 homolog 4-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9AD9F)

HSP 1 Score: 111 bits (277), Expect = 8.740e-24
Identity = 87/281 (30.96%), Postives = 130/281 (46.26%), Query Frame = 0
Query:  154 VTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESPAGLCLTAAVAAASHGI-GVLYLDTANGCSVRRMQQIARSRYADASGEMSARQMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDSVTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRRAMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYXXXXXXXXXXAVEGASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGV 433
            ++TG   LD LL  GL    + E+ G  + GKTQ               LC+T A + A+     VLY+DT  G S +R+Q I  +R        + + M A   RLR  R FD+  + S L+       + G D  Y+  +LV++DSVTAVV+P+LGG +   GHG+M  L   L   A + S  VL+ N+ V       +    + ALG TW  VP  R+LLT      +             ++   +    + A+++K   QP   +  F+I D G+
Sbjct:   82 LSTGCSSLDELLDGGLYTSELTEITGGPATGKTQ---------------LCMTTAASVATTAQQNVLYIDTNGGFSSQRLQDIMAAR------GNTDKIMAAAFQRLRCARTFDLFELLS-LLEMTKSSMDSGSDAFYASLKLVVVDSVTAVVAPVLGG-QQTEGHGMMIHLARSLKALAVEYSVAVLLTNNQVRG-----DGTQRKPALGRTWSHVPHCRLLLTHDRSDDA-------------SLCTVNRPINREARIIKSGRQPINVSCTFKIDDSGI 321          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.21.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQZ5_ECTSI1.230e-17473.05RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L2A5_9PHAE8.670e-7889.93Rad51 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835YM23_9STRA3.430e-3634.32P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4X2LHD2_VOMUR7.510e-2533.67DNA repair protein n=2 Tax=Vombatus ursinus TaxID=... [more]
A0A287D3P6_ICTTR1.050e-2434.83DNA repair protein n=6 Tax=Sciuridae TaxID=55153 R... [more]
UPI00049064F11.520e-2432.88DNA repair protein RAD51 homolog 4 n=1 Tax=Oryctol... [more]
A0A1Y1HKY4_KLENI2.570e-2429.97DNA repair protein RAD51 n=1 Tax=Klebsormidium nit... [more]
UPI0018F4FA243.190e-2431.85DNA repair protein RAD51 homolog 4 n=1 Tax=Tachygl... [more]
A0A8B7Y1H2_ACAPL6.370e-2432.86DNA repair protein RAD51 homolog 4-like n=1 Tax=Ac... [more]
UPI0018D9AD9F8.740e-2430.96DNA repair protein RAD51 homolog 4-like n=1 Tax=Pa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 136..435
e-value: 2.4E-12
score: 46.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 133..438
e-value: 7.1E-38
score: 132.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 154..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..85
NoneNo IPR availablePANTHERPTHR46457DNA REPAIR PROTEIN RAD51 HOMOLOG 4coord: 134..432
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 150..345
score: 11.792897

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig203contigP-littoralis_Contig203:91213..104130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig203.21.4mRNA_P-littoralis_Contig203.21.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig203 89088..104790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig203.21.4 ID=prot_P-littoralis_Contig203.21.4|Name=mRNA_P-littoralis_Contig203.21.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=439bp
MPRLDRMGLDKRTLGVLASLPVPITLAESLLSRDSEQLALECGVSLRAVN
KLRYLVALRCQPQPPVPDRRPSDSQENDGVPHEEGGGDDGTNGGGENATT
PLTTARRRRGADEREREGAGGGNGSSGASRLLPSSSFTSADSLYRQAKEV
GGFVTTGSDGLDNLLCKGLMLHHVVEVVGRSSAGKTQARQRGRGWAEESP
AGLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADASGEMSAR
QMDALLDRLRVVRAFDISRVTSALVAYIDGVTEGGRDGIYSKCRLVILDS
VTAVVSPLLGGVKNPAGHGLMASLGHLLNRAATQCSACVLVANSTVASRR
AMDEDEGPRAALGMTWEGVPSIRVLLTDSAQTGSGGYGSGSGGGGGGAVE
GASDAHTKTAKLLKHPAQPCGNTVVFEIGDGGVIDVQD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR027417P-loop_NTPase
IPR020588RecA_ATP-bd