mRNA_P-littoralis_Contig200.85.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig200.85.3
Unique NamemRNA_P-littoralis_Contig200.85.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: D7FPF8_ECTSI (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF8_ECTSI)

HSP 1 Score: 674 bits (1740), Expect = 3.820e-238
Identity = 328/361 (90.86%), Postives = 345/361 (95.57%), Query Frame = 2
Query:  110 MLGRVTKYRVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESGVDFDEAMP 1192
            MLGRVTKYRV NDAPSEVFEA SEQERKDRLLLSY ERV K LDVKAVQ G G  NELVFDLVG+DASIANALRRILLAEVATVAIEHVYM+MNSSIIHDEILAHRLGL+PIMANPRMFEFVGE GGE D+PTEFNTCVFKLEVKNP+DPADMPDPMP GTSYAAGPRRTMNVFSGAMEWCPHGDQ ERFEGEGG+RPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPV+TL+EE+EG++AE+LVAKCPL+VFDIEDLGG  KRAKVARPRDCTMCRECIREPGWS+K+SLSR+ADHFIFG+ESVGMLPPKELLKDSIQVLRQKC SMIAEVEAFESGVDFDEAMP
Sbjct:    1 MLGRVTKYRVKNDAPSEVFEAASEQERKDRLLLSYAERVEKTLDVKAVQSGGGHTNELVFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMANPRMFEFVGEEGGEQDEPTEFNTCVFKLEVKNPADPADMPDPMPTGTSYAAGPRRTMNVFSGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKEEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKVARPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPPKELLKDSIQVLRQKCDSMIAEVEAFESGVDFDEAMP 361          
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A6H5JLW5_9PHAE (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW5_9PHAE)

HSP 1 Score: 577 bits (1486), Expect = 1.300e-199
Identity = 290/363 (79.89%), Postives = 313/363 (86.23%), Query Frame = 2
Query:  110 MLGRVTKYRVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCV-FKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFS-GAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESGVDFDEAMP 1192
            MLGRVTKYRV NDAPSEVFEA SEQERKDRLLLSY ERV K LDVKAV+ G G KNELVFDLVG+DASIANALRRILLAEVATVAIEHVYM+MNSSIIHDEILAHRLGL+PIMANPRMFEFVG+ GGE D+ T+    V  +   + P  P     P   G     G          GAMEWCPHGDQ ERFEGEGG+RPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPV+TL++E+EG++AE+LVAKCPL+VFDIEDLGG  KRAKVARPRDCTMCRECIREPGWS+K+SLSR+ADHFIFG+ESVGMLPPKELLKDSIQVLRQKC SMIAEVEAFESG+DFDEAMP
Sbjct:    1 MLGRVTKYRVKNDAPSEVFEAASEQERKDRLLLSYAERVEKTLDVKAVRSGGGHKNELVFDLVGVDASIANALRRILLAEVATVAIEHVYMFMNSSIIHDEILAHRLGLIPIMANPRMFEFVGDEGGEQDEATDGVQHVRVQAGGEKPGGPGGHAGPYADGYELCGGAATDHERLQVGAMEWCPHGDQVERFEGEGGLRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVVTLKQEVEGQEAEELVAKCPLNVFDIEDLGGAGKRAKVARPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPPKELLKDSIQVLRQKCDSMIAEVEAFESGIDFDEAMP 363          
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A7S2UWR1_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWR1_9STRA)

HSP 1 Score: 341 bits (875), Expect = 4.250e-107
Identity = 189/386 (48.96%), Postives = 245/386 (63.47%), Query Frame = 2
Query:  113 LGRVTKYRVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFV---------GETGGE--PDDPTEFNTCVFKLEVK--------------------NPSDPADMP---DPMPKGTSYAAGPRR--TMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFE 1162
            L  V+ Y +  DAP E F        K      Y E V K L ++  +    D  +L+FD+ GID SIANALRRILLAEV ++AIEHVY++ NSSI+HDE+LAHRLGLVPI+A P  FE+          G+ GGE   DDPT+ NT VFKL+VK                    N ++  D+    D   +G       +R  TM V+SG ++W P G QEER  G+   + V DDI++AKLRPGQ+IV E HCRKG+GKDHAK+SPVATA YR+LP IT  +++ G DAE L  KCP+ VFDIEDL GG +RA  +RPRDCTMCRECIR P   +KISL R+ADHFIF VE+VG+  P+++ K++I++L+ K +  I E+E  +
Sbjct:   28 LMAVSSYHLKTDAPHESFSV------KPNKTTDYVESVAKKLHIEIQKL---DDEQLIFDISGIDVSIANALRRILLAEVPSMAIEHVYVWANSSILHDEVLAHRLGLVPILAPPEEFEWFTRRKGGAEDGDEGGEGEEDDPTDLNTLVFKLDVKYNRHAAVKQQRRQKRLGPRANGAEEMDVDSTSDGEEEGPVEGGQRKRPPTMTVYSGDLQWEPQGGQEERLAGKE-PKAVVDDIILAKLRPGQQIVLEAHCRKGVGKDHAKYSPVATAFYRMLPRITFSQDVTGEDAEVLEKKCPMKVFDIEDLAGGGRRAVASRPRDCTMCRECIRTPPGDQKISLERVADHFIFSVETVGVTKPEKIFKEAIKMLKTKSLDFIEEIEQLQ 403          
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A7S2RJI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJI0_9STRA)

HSP 1 Score: 337 bits (865), Expect = 2.730e-106
Identity = 182/364 (50.00%), Postives = 243/364 (66.76%), Query Frame = 2
Query:   98 GGGEMLGRVTKYRVNNDAPSEVFE-----ADSEQER--KDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESG 1168
            G  E    + +Y+V N   SE F+     AD+   R   DRLL       G  ++V         + ELVFDL+G+DAS+ANALRRI+LAEV T+AIE+VY+ MNS +IHDE+LAHRLGLVPI  +PR+F+         D+    NT VF L+V+     +   D  P G++       TM+V+S  ++W P  DQ E F    G+RPVH+DIL+AKLRPGQ I  E HC++G+GKDHAKFSPVATASYRLLP I + +E++G  AE L A CP++VFDIEDLGG  +RA  ARPRDCTMCRECIR+ GW E++ L R ADH+IF VE+VGML P++++K++I++LR+KC   + E++   +G
Sbjct:    1 GTMERSESIRRYQVKNQGVSEEFQPVSAAADASVHRPFSDRLL------EGMRIEVM-----ESSEEELVFDLIGVDASVANALRRIMLAEVPTMAIEYVYIEMNSGMIHDEVLAHRLGLVPIQVDPRLFK----DKVPQDEINSKNTVVFGLDVQC----SRSADTRPPGSTEPY----TMSVYSKHLQWLPQADQAEEFPD--GIRPVHEDILLAKLRPGQHIKLEAHCQRGVGKDHAKFSPVATASYRLLPDIVVADEVKGETAEQLKAMCPMNVFDIEDLGG-ERRATAARPRDCTMCRECIRQEGWDERVKLYRAADHYIFKVEAVGMLAPRDIVKEAIRILREKCTDFLGELQGDPAG 338          
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A024TZC9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZC9_9STRA)

HSP 1 Score: 332 bits (850), Expect = 2.240e-104
Identity = 188/357 (52.66%), Postives = 240/357 (67.23%), Query Frame = 2
Query:  137 VNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESGV------DFDEAM 1189
            V  DAP  V + +SE         ++ +   K L VK +Q  + D  E+VFDL+GIDASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+  +PR F+   E   E  + T+ NT VFKL+V   +DP+D P+ + K T+ +        V+S  +EW P G QEERF   G +RPV +DILIAKLRPGQ I  E HCRKG+GKDHAKFSPVATASYRLLP IT    + G DA+ L   CP++VFDIEDL      A  ARPR+CTMCRECIR PGWS+K+ + R++DHFIF VE+VGMLPP++LL ++I+VL  KC   +  + A +  +      D D+AM
Sbjct:    8 VGLDAPH-VPDTESESSH------AFVDNFKKQLKVK-IQSLTDD--EIVFDLIGIDASIANAFRRILLAEVPTMAIEHVYLWNNSSIIQDEVLAHRLGLIPLQVDPREFQSFPEH--EEGEATDENTLVFKLDVTCTADPSD-PNDISKATNAS--------VYSRHLEWVPQGLQEERF---GSIRPVSEDILIAKLRPGQTIALEAHCRKGVGKDHAKFSPVATASYRLLPEITFPAPVVGADAKTLQKTCPMNVFDIEDLA-----AVAARPRNCTMCRECIRAPGWSDKVKMGRVSDHFIFSVETVGMLPPEDLLPEAIKVLVAKCDVAVESLNAVDDELRENADEDEDDAM 335          
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A6G0XIR3_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIR3_9STRA)

HSP 1 Score: 330 bits (847), Expect = 4.950e-104
Identity = 170/306 (55.56%), Postives = 217/306 (70.92%), Query Frame = 2
Query:  272 KNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESGVDFDEAM 1189
            + ++VFD++GIDASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+  +PR F+   E   E  + T+ NT VFKL+V   +DP D PD + K T+ +        ++S  +EW P G QEERF   G +RPV +DILIAKLRPGQ I  E HCRKG+GKDHAKFSPVATASYRLLP I     + G DA+ L   CP++VFDIED+      A  ARPR+CTMCRECIR PGWS+K+ L R++DHFIF VE+VGMLPP++LL ++++VL  KC   +  + A +  +  DE M
Sbjct:   43 EEDIVFDVIGIDASIANAFRRILLAEVPTMAIEHVYLWNNSSIIQDEVLAHRLGLIPLQVDPREFQSFPEL--EEGEATDENTLVFKLDVTCTADPDD-PDDISKATNSS--------IYSRHLEWVPQGLQEERF---GSIRPVSEDILIAKLRPGQTIALEAHCRKGVGKDHAKFSPVATASYRLLPDIQFPAPVTGADAKTLQKTCPMNVFDIEDMA-----AVAARPRNCTMCRECIRAPGWSDKVELGRVSDHFIFSVETVGMLPPEDLLPEALKVLMTKCDVAVESLNAMDDELAEDETM 329          
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A1V9ZSM6_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZSM6_9STRA)

HSP 1 Score: 328 bits (841), Expect = 5.030e-103
Identity = 185/352 (52.56%), Postives = 232/352 (65.91%), Query Frame = 2
Query:  134 RVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAFESGVDFDEAM 1189
            R+  DAP      D+E E  +R L S+     KN  +K  Q    D   +VFD +GIDASIANA RRILLAEV T+AIEHVY++ NSSII DE+LAHRLGL+P+  +PR F+   E   E  + T+ NT VFKL+V   +D  D P+ + K T+ +        V+S  +EW P G QEERF   G +RPV +DILIAKLRPGQ I  E HCRKG+GKDHAKFSPVATASYRLLP I     I+G+DA+ L   CP++VFDIED       A VARPRDCTMCRECIR PGW EK+ L R++DHFIF VE+VGML P+ELL ++++VL  KC   +  + + +  +  D  M
Sbjct:    7 RIGTDAP---HMPDTECEATERFLESFK----KNFKIKIQQLTDED---IVFDAIGIDASIANAFRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLIPLQVDPRDFQSFPEH--EEAEATDENTLVFKLDVVCEADKDD-PEDISKATNAS--------VYSRHLEWIPQGMQEERF---GNIRPVSEDILIAKLRPGQCIALEAHCRKGVGKDHAKFSPVATASYRLLPDIQFPAPIKGQDAKTLQKTCPMNVFDIED-----SHAVVARPRDCTMCRECIRAPGWDEKVKLGRVSDHFIFSVETVGMLKPEELLPEALKVLMSKCDVALESLNSIDDELTNDVDM 329          
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A5D6XHD4_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHD4_9STRA)

HSP 1 Score: 328 bits (841), Expect = 7.240e-103
Identity = 183/307 (59.61%), Postives = 217/307 (70.68%), Query Frame = 2
Query:  212 YPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVA-KCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKC 1129
            Y E++ K + VK +Q  S  + E+VFDL+G+DASIANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLVP+  +PR  EF      E  + T+ NT VFKL+V    DPA   D        AA    T +V+S  +EW P G+QEERF   G +RPVH+DILIAKLRPGQ I  E HCRKG+GKDHAKFSPVATASYRL+P I L + + G DA  LVA KC L VFDIEDLGG    A V   R C MCRECIREPGW EKI L R++DHFIF VESVGM+ P+ELL +++ VL  KC
Sbjct:   30 YVEQLKKQVKVK-IQ--SLSEEEIVFDLIGVDASIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLNVDPR--EFQAFPDNEEAEATDENTIVFKLDVTCRFDPAHPQD--------AAKALHT-SVYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHIELAQPVTGADARQLVADKCALGVFDIEDLGGVDT-AVVKDARSCNMCRECIREPGWDEKIKLGRVSDHFIFSVESVGMIKPEELLPEALNVLVDKC 318          
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A662X4Y9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4Y9_9STRA)

HSP 1 Score: 326 bits (836), Expect = 4.140e-102
Identity = 184/332 (55.42%), Postives = 227/332 (68.37%), Query Frame = 2
Query:  134 RVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQPGSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKC 1129
            RV  DAP  V  A + +     L   + E+  + + VK +Q  + D  E+ FDL+G+DASIANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLVP+  +PR  EF      E  + T+ NT VFKL+V    DPA      PK  S A       +V+S  +EW P G+QEERF   G +RPVH+DILIAKLRPGQ I  E HCRKG+GKDHAKFSPVATASYRL+P + L E +EG DA+ LV +C + +FDIED+GG    A V   R CTMCR CIREPGW+EKI L R +DHFIF VESVGM+ P+ELL +++ VL +KC
Sbjct:   11 RVGQDAPHVVRNAAAFES----LGSDFVEQSKRQVKVK-IQSLTDD--EIQFDLMGVDASIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLRVDPR--EFQAFPDHEEAEATDENTIVFKLDVTCAYDPAH-----PKDLSKAVH----ASVYSRDLEWVPQGNQEERF---GAIRPVHEDILIAKLRPGQSIALEAHCRKGVGKDHAKFSPVATASYRLMPHVELTEAVEGDDAKRLVEECQMGLFDIEDMGG-VPTAVVKDQRACTMCRNCIREPGWNEKIRLGRQSDHFIFSVESVGMIKPEELLPEALNVLMEKC 320          
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Match: A0A0P1AUD4_PLAHL (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AUD4_PLAHL)

HSP 1 Score: 324 bits (830), Expect = 2.730e-101
Identity = 169/286 (59.09%), Postives = 207/286 (72.38%), Query Frame = 2
Query:  272 KNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHDEILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDPADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVHDDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEEIEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGWSEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKC 1129
            ++ ++FDL+GIDA+IANALRRILLAEV T+AIEHVY++ NSSII DE+LAHRLGLVP+  +PR  EF G +  E  + T+ NT VFKL+V    DP    DP     S         +V+S  +EW P G+QEERF   G +RPVHDDILIAKLRPGQ +  E HCRKGIGKDHAKFSPVATASYRL+P + L E+IEG DA  L+  CP+++FDIED+GG  +   V   R CTMCR CIREPGW +KI L R ADHFIF +ESVGM+ P+ELL +++ VL  KC
Sbjct:   45 EDSIIFDLIGIDAAIANALRRILLAEVPTMAIEHVYIWNNSSIIQDEVLAHRLGLVPLNVDPR--EFQGFSDNEEAEATDENTIVFKLDVTCKFDPEHPKDPTKAIFS---------SVYSRDLEWVPQGNQEERF---GLIRPVHDDILIAKLRPGQSLALEAHCRKGIGKDHAKFSPVATASYRLMPKVELSEKIEGADAVSLMENCPVNLFDIEDVGG-VQSIVVKDQRACTMCRNCIREPGWDKKIRLGRQADHFIFSIESVGMIKPEELLLEALNVLVNKC 315          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.85.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPF8_ECTSI3.820e-23890.86DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A6H5JLW5_9PHAE1.300e-19979.89DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A7S2UWR1_9STRA4.250e-10748.96DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A7S2RJI0_9STRA2.730e-10650.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A024TZC9_9STRA2.240e-10452.66DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A6G0XIR3_9STRA4.950e-10455.56DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A1V9ZSM6_9STRA5.030e-10352.56DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A5D6XHD4_9STRA7.240e-10359.61DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A662X4Y9_9STRA4.140e-10255.42DNA-directed RNA polymerases I and III subunit RPA... [more]
A0A0P1AUD4_PLAHL2.730e-10159.09DNA-directed RNA polymerases I and III subunit RPA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig200contigP-littoralis_Contig200:273515..279952 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPF8
Preferred namePOLR1C
PFAMsRNA_pol_A_bac,RNA_pol_L
Model size2201
Max annot lvl2759|Eukaryota
KEGG rclassRC00055,RC00523,RC02795
KEGG koko:K03027,ko:K08059,ko:K13196,ko:K14163,ko:K18715
KEGG TC1.I.1
KEGG ReactionR00435,R00441,R00442,R00443,R03661,R05578
KEGG Pathwayko00230,ko00240,ko00860,ko00970,ko01100,ko01110,ko01120,ko03020,ko04612,ko04623,ko05169,map00230,map00240,map00860,map00970,map01100,map01110,map01120,map03020,map04612,map04623,map05169
KEGG ModuleM00121,M00181,M00182,M00359
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005730,GO:0005736,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006351,GO:0006352,GO:0006353,GO:0006360,GO:0006361,GO:0006363,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015074,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032196,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040029,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070893,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
Exons9
Evalue3.75e-245
EggNOG OGsCOG0202@1|root,KOG1521@2759|Eukaryota
Ec32 ortholog descriptionDNA-directed RNA polymerase, insert domain
Ec32 orthologEc-14_004750.1
EC6.1.1.15,6.1.1.17
Descriptiontranscription by RNA polymerase I
Cds size1086
COG categoryK
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03016,ko03019,ko03021,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig200.85.3prot_P-littoralis_Contig200.85.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig200 274578..279843 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789983.6567311-UTR-P-littoralis_Contig200:273514..2745071680789983.6567311-UTR-P-littoralis_Contig200:273514..274507Pylaiella littoralis U1_48UTRP-littoralis_Contig200 273515..274507 -
1680789983.6711967-UTR-P-littoralis_Contig200:274564..2745771680789983.6711967-UTR-P-littoralis_Contig200:274564..274577Pylaiella littoralis U1_48UTRP-littoralis_Contig200 274565..274577 -
1680789983.78388-UTR-P-littoralis_Contig200:279843..2799521680789983.78388-UTR-P-littoralis_Contig200:279843..279952Pylaiella littoralis U1_48UTRP-littoralis_Contig200 279844..279952 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789983.6823301-CDS-P-littoralis_Contig200:274577..2746851680789983.6823301-CDS-P-littoralis_Contig200:274577..274685Pylaiella littoralis U1_48CDSP-littoralis_Contig200 274578..274685 -
1680789983.6928332-CDS-P-littoralis_Contig200:275285..2754201680789983.6928332-CDS-P-littoralis_Contig200:275285..275420Pylaiella littoralis U1_48CDSP-littoralis_Contig200 275286..275420 -
1680789983.711426-CDS-P-littoralis_Contig200:276126..2763181680789983.711426-CDS-P-littoralis_Contig200:276126..276318Pylaiella littoralis U1_48CDSP-littoralis_Contig200 276127..276318 -
1680789983.7243133-CDS-P-littoralis_Contig200:276700..2768271680789983.7243133-CDS-P-littoralis_Contig200:276700..276827Pylaiella littoralis U1_48CDSP-littoralis_Contig200 276701..276827 -
1680789983.7338276-CDS-P-littoralis_Contig200:277085..2772161680789983.7338276-CDS-P-littoralis_Contig200:277085..277216Pylaiella littoralis U1_48CDSP-littoralis_Contig200 277086..277216 -
1680789983.746818-CDS-P-littoralis_Contig200:277850..2780031680789983.746818-CDS-P-littoralis_Contig200:277850..278003Pylaiella littoralis U1_48CDSP-littoralis_Contig200 277851..278003 -
1680789983.7554777-CDS-P-littoralis_Contig200:278484..2786401680789983.7554777-CDS-P-littoralis_Contig200:278484..278640Pylaiella littoralis U1_48CDSP-littoralis_Contig200 278485..278640 -
1680789983.7673836-CDS-P-littoralis_Contig200:279759..2798431680789983.7673836-CDS-P-littoralis_Contig200:279759..279843Pylaiella littoralis U1_48CDSP-littoralis_Contig200 279760..279843 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig200.85.3

>prot_P-littoralis_Contig200.85.3 ID=prot_P-littoralis_Contig200.85.3|Name=mRNA_P-littoralis_Contig200.85.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=362bp
MLGRVTKYRVNNDAPSEVFEADSEQERKDRLLLSYPERVGKNLDVKAVQP
GSGDKNELVFDLVGIDASIANALRRILLAEVATVAIEHVYMYMNSSIIHD
EILAHRLGLVPIMANPRMFEFVGETGGEPDDPTEFNTCVFKLEVKNPSDP
ADMPDPMPKGTSYAAGPRRTMNVFSGAMEWCPHGDQEERFEGEGGVRPVH
DDILIAKLRPGQEIVAEMHCRKGIGKDHAKFSPVATASYRLLPVITLEEE
IEGRDAEDLVAKCPLDVFDIEDLGGGSKRAKVARPRDCTMCRECIREPGW
SEKISLSRIADHFIFGVESVGMLPPKELLKDSIQVLRQKCVSMIAEVEAF
ESGVDFDEAMP*
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mRNA from alignment at P-littoralis_Contig200:273515..279952-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig200.85.3 ID=mRNA_P-littoralis_Contig200.85.3|Name=mRNA_P-littoralis_Contig200.85.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6438bp|location=Sequence derived from alignment at P-littoralis_Contig200:273515..279952- (Pylaiella littoralis U1_48)
GCAGTGGTGTCGACAGCATCCCTTGGGTTGAGGTAGATACCTCTCAAACA TCGAGGAGTGAAAGAGAGATTTGTAGATCAAGTTGATCCCCTTCACTGGC GGTGGAGAAATGCTTGGTCGTGTGACCAAGTACAGGGTCAACAACGATGC GCCATCCGAGGTGTTTGAGGCAGACAGCGAGCAAGAACGAAAGGTACTGC TGTTTCTGTCGCAGCTGCTGCTCCTTTACTGCTGCTGCTGTTGGTCGAAG GTCAAGGTAGTGCAAGCGGTATGTAAAGCCTGCTGGTCGAATTCGAGCCG TGTGTCGTTGTATTGTCGAAGGTGTCGGCATTTGCGGTCGTCACTCACCT CACTGGTTCCTTCTGCTGTTCAGAAAGCAAAAAGTAAAATATCAAAAAGC ACAACAAACGCACCACAGCGCTCGCTCGAGGCAAACGTACAGGAATCATG GAAGTAGTCAGCAGCAGCACAGTATTGCCGCCACGGGTGCGCTGAGAGAA GAGCAGGGCGAACAGAAGCTGTAGGCATCCTTTACGTCCGTGCGTATCTA TTTTTTGTGGATGGTTGGTGGATTGAAGGTACTGCTGTTCTGTTTACTGC TGTAAGTCTTTCTGGGCACGATCAATCCTGGATATGACCCAGCTCCAAGT CTTGCGTAGTTTGGCGATTTCGTCCGGGGGCTCACTGGCTGCCAACAGCA TTAGCAGTACAAGTACCAACTTCAAGGGATTCGGCACAACACCTCCTTGT GCTGGCAAAGGGTAAACAAATTCAGCAGGTAAACAGGGAAGTCGGATTAC ATGACACTTGCCTCAGATTCACATATAATGTGGTTGCTACCACATGATGG TGTGGTTGCCTCCCTACTGCTGTCGTAGTACCGCTGTAGCGCAGTGGGTG GTGGACGATTTTCCTGGCATTGCTTTACTGTACAGCAGCCGCTGTTATTA AATTTGTGTGGTTTCGTTTGAACCAACCGCCTGCACCTCGTGTTGTTCTT GCTGTATACGAAGTAATATGTAAGGCTTCATTGTCCCTAACTAATCCTAT GGAAATGCCTACAAGTATACAGCTGCGTGTAGACCGCAGGGTTGTGGACT GACTCGAGCTCAAAGCCACCCGTCGAATCAAGACGCATGGTGTCTGCAGC AGCAGCACATTCATGTCCACGACGACCCGCGCCAAGTCGGGATTACCTCT CGGAACTATTGTGTACAGCAGTGCACAGAAAGTAGCATTTCCCGGATCTG CTCCTTTCCACTATTTGCGTAAGCTCAGTTTTGCCGAATGCTTTGATACG CTGTGTTCTCAGGACCGACTGCTTCTCAGCTACCCCGAGCGGGTCGGTAA GAATCTAGACGTGAAGGCGGTGCAGCCAGGCAGCGGGGACAAGAACGAGC TAGTTTTCGACCTCGTTGGCATTGATGCCTCCATCGCGAACGCGCTGCGA AGAATCTTGCTAGCGGAGGTGATGTGCAGAAAACATGAAACGAATTTTGT GACGAAGTAGTTTTTGTCAATTTTTTTTCGTGTTTTCAACGTTCCGAGTG CGCGGCAAGACAAATATTTTCTTTTCATAAAATACAGTACTGTAAACAGT AAAGGACTGTTGTTGGTTTCCCGGGGCAGCGTAACGCCGAAAACATTCAA GAAAACTTTTGAGTGTCTGAAATTCCGAAAGTTTGAACGTACGCGAGTAG GTAGATGACTCGCCCCTCTTTCCCGGAACCCCGTGATTCTTCGGGGGCTA GGTCTTAGTACGTCCTAATTTGTGGATACTTGAGCCCCCCGTTCAAAGCC GTCCTGTAATTCTACCGTTGCCATAAACCGCCGGGTCTGAATCTTACTTT CTTTGCCCTGCAAAGAGTGCCAACGACGACCGACCTTCATCAGCGCGATA TCATATGTGTCAGTGCCATGAACGTTTCTTTTTTGTCTGTGTTTCCAAGG TAGCGACGGTGGCCATCGAACACGTGTACATGTACATGAACTCTTCCATA ATCCACGACGAGATCCTGGCGCACCGTTTGGGGCTGGTCCCGATCATGGC AAACCCGCGCATGTTCGAGTTCGTGGGCGAGACGGGGGGCGAACCAGACG ACGTGAGGTTCAGTCGTTCGGCTTTTATTTTGGCTTTTATTTTGTTGTTC CCCGTGCGCACGGCGGTCTTCTCTGTGTGTATACCGGTACAGTACCGACG CACTCAAAAAGAAACACCAATTTTGAGCGAGGCTCAAAACCTTTTTTTGT CCCCACCTAAGCACAGGCCAGTTTATAGGATCCAGTGTGGCGCGGGCCGC TGAGCCTAATGTCATAGGCCTAATTTCTTATTTATTTTTAATTCTGAGGC TGGATTTCTTTCAAAGGCATTTCTTGTGAGTGGGCCGGTACTGTACAATG CAGGCGTAGAAAATTACTTTTTTTGCCTGAACACAACACACACCCGCACG AATGAACAAGGAAAACAACTTGGTGTACTTGCTGACTGTGTACAGCGGTA ATCGTGTGAAGGTTACGCGCGCCTCAAACCGAAGTGCAGGAATACATTTA AGTAACACTGAACGTTTTTAGGTTTCAGCATATAATTACTTGTACAAGTA TACGTTTAGAAGCGTGTCACCTTCACACCGTAACTGCTGCGCACACAGTT GGCGTGCCCTATCCCTCGCTACAGCAACGGCTGCCCGGCCGTCCGTCGCC TTCACCTGTTGCCGCGCCTTTCTCGTCTCTACGCAGCCGACGGAGTTCAA CACGTGTGTGTTCAAGCTGGAGGTGAAGAACCCGTCCGATCCCGCGGACA TGCCCGATCCGATGCCCAAGGGAACGAGCTATGCCGCAGGGCCGCGACGC ACCATGAACGTCTTCAGGCATGTGACGACAAATACCGTCCACGCGACAGG TTTTGCACTGTCAACGCCGTTTCGGCCACGTGAAACCCGGTGTAGAACGT GAAGACGGGTGTCATGTAGGAGCAGTACCGAAGAAACAACTGGCATTGCA ATAACACGCGCCCAAGACTGTAATATTTTGAAAACTGTTGACGTTGTATC TTGGTCTCCCTTTTGCTTGCCTCCGGTGTCCGCCCCCGCCAATAATCTAT CGTACCTTGTTTGTGCCTGCTTCAGCGGTGCCATGGAGTGGTGTCCGCAC GGGGACCAGGAGGAACGCTTCGAGGGGGAAGGGGGGGTGCGGCCGGTGCA TGACGACATCCTCATCGCCAAGCTACGACCAGGGCAGGAGATTGTGGCGG AGGTTTGTGAGCTTCTGTGCGCGTATTGATGTACATTTTTCGTTTTTCGT GCTGCACACGAAACGCCTGGTCATGCAAATTACTTGATGCACTTCATGAT GGCACTGTTTCCCTCGTTGAAGGAGCGTTCACACGTGTGTTGTCCCTTGT TGGTGGGTGGAGAACCGGGCGTCAGTTGATGGGCACGTCCCAGCAGGAAG GGGTCGTGTTGCACACAGCAGCTCTATAGCACGCCCCTCCCGTTTACCCG TTCGCTCGGGGTTGAAATCAACGCCGTGGGAGTCTGCGCGACATGACATC CATCGTCGTGGGTGGCGGTGGATGCTATTTTTCGGGGCCCTCGTCACCGA TGCCATGTCGCGTCGCTTTTCTGCACTGCTGCAGATGCACTGCCGGAAGG GCATCGGAAAAGACCACGCCAAGTTTTCTCCTGTGGCCACGGCGAGCTAC CGCTTGCTTCCTGTGATTACCCTCGAGGAGGAGATAGAGGGGCGAGATGC GGAGGATCTCGTGGCGAAGTGTCCGCTGGACGTCTTCGACATCGAGGACC TGGGTGGAGGCAGCAAGCGGGCGAAGGTGCGTGGGGGAAAGTCGTGATGG TATCGTGGTCTTCGGTCATAGTGGGGATAAAAAAAACGGTAGTGCTCGCA CTGCTGTTCTTGCCCCCTATCCCCCTCAGGATTTTCCGCTGCCCTGATAA TTTTCTGCTGCTTCCTTTCACCGGCGCCTGGTTTTTTTTTTCTCGTTCTT TGTTTTCGCTCGATAAGCATCGTTTTAGAAGGCTCTCTCTGCGGCGGCGC CGTCGGTCGCCCACGGAAATGTTACACACTAACACTACGTGCTCGGTGTG TACTTTGAAAAGTATTTTGTAACTTCAGCTGGAGAGCACAGGACCCGGCG TCACTCCACTGCCGCTTGATACGCACCAGGTGCAAGGTGTACGTTCACGC TGCACCGATCTGCAGAGCACGCCAACCCGCGTGGGGTCTTTGCTGCACGC CGTTTCAATCAGCGAGAAGTGTTTGTGCATTGCACGACAAAAACGGAACG GCCCTTCGAAGAAGTTGCTCGAACAACGGTACCGTTTTCTTGTGGAGCTT CCTGGCTGAGTCTTCTGTTGATCGGGTGGTGCCGGCAGTCAGCCCCTCAC AGCAAGCAGCTGGCTGGACGTTCTGATTTCGATTACCGCGGTGCCCCCCC GCCAAAAAAAACACACCTGTCGACGTCCAATGCGGTCGTTTCGGCCGCTT TCCTGCGTGTTCCTCTTTGGTTGATGAAAAAGGTGGCTCGCCCACGAGAT TGCACCATGTGTCGGGAGTGCATTAGGGAGCCAGGGTGGAGCGAGAAGAT CTCTCTTTCACGCATCGCTGACCACTTCATCTTCGGGGTCGAGTCCGTGG GGATGCTTCCGCCAAAGGTGCGGCCTGGCCTTGTTGATATCATACACTGA TGTTGCGTCCGCCCACTCATAGACGGACCAATCTTGGCCGAGGATCAGCA CCTGACGACGTTGACAGCAATGTATTGACCACACGGCGTCTTCCGGAGGA TGTTGTGGCACTACAAACTGCAACTGACCTGTTTGATTGGGACACCCTCT TTTGCCTCCCTCAAGAACCCGAGCCTCCATTTCGTACGGCAGACAACAAA CGATATACGAAGTATATATATATTTTAGTGAACCAGCGCCTCGCCGAAAA GGTATTGTCGATTTGAAGTTCCCGGTATGAGACTACTTATTTTGCCAGTA CTATTTTTTTAAAAGAAGAGCTAAAAGCTTGGCTTTTGCTTTTTACATTG TAGTTGTTCGTTTTTCGTTTTTACGTAAATCCCAGCGAATACCAGAATAA ACATTTCGTCGAACAAACCGCTCCATTTAACGTGCAAGTAAAAAATATGT CGAAGTTCTTGGCTACTCGTCTCGCCATTCTCCGACCTGCGTTGCCCGCG TTGCCTGCCAACGATACGAATCCCGTCTCTGATCTCATTGCGGCTGGCCA TGCTTTGGTTGTTGCAGGAGCTCCTCAAGGACAGCATCCAAGTATTGCGG CAGAAGTGCGTCTCTATGATAGCGGAGGTGGAGGCATTCGAGTCAGGGGT CGACTTCGACGAGGCGATGCCATAACGCCCTCAGCGAGCCCATACCCGAC CACTTGGCCCAAGCCAATTGTCTGAGAAAAAGGGAGGGGGGGGGGGGCGT ACAAGTATTTATATATTGCTTGCCTTAGTCGCTTGGCCATTGACCACGCG TCACCTCTTTCGAGAGGTAGCACCACCGTTCCACTCCGTATAGAGCCGCA AACATGCAGGCGCTTTTTCCGTTTTGCCAGGTCGACGTCTGGAAAAGTCG TTGTACTAAAACATCGTTTTTTTTGTCGAAGCCTACATACATAAAACCTT TGAGATATGATGATACTCTCGAAGAATGCAAAGAGGCTTTCGTCTCGAAA ACGTTGGAAAACGTGTCAAAACAGGCTGTACAAACTTGACGCGAAACATT GGGAGTCGGGTTTGACATCTTGTTCGAAATTTTGTTTGACATTTTGTTTG ACAATCGAAAGCGAGGAGTAGGGTTGGCAGAGGGTTCAGCGGTGCCAGGT TGCCCCTGAGCCTGAGTCATACTATGACCGGCCGCAGAAAGCGCTGATAA TTTCCACGGATTTAGGGGTTTACTGCTCGAAACCCGCAGCACCTGGCGTT GTAGAGAAGATATTTTTTGTTCTTTCTCATGACATGCGACTGAAAACATG AAATAGACGTGAAACTTCTGTGTGACTGCGTTGTTGTGGCCGTTGGCCGA GAGGCACGTTTTTGTTTGCTTTTTTTCCGACACAGGATATCAATGATGTA CACGTATTCGTACGATATCTCCCTAGACAGGCGAGAATCTAGAGCAAATT TATCTTCCTCTGTTTCTTAAACTCACCGAATGACGAATGATGTGCAGCAG TATCGCACGTTGGGTTCTCAAAGCGATGGGCCCGGTCGGGTCGGTTTATT TTTTACTTCGAAGTAATTTTTATTTCGAGAAAAATCCAAGCTCAAACGTG CGCCACGCACCTGAAAACGAAACGGAATAATAACTATCGGTGCATGTGAC TTGTTCGTTGCCTTGAACTCGGTGACTGTGTTTTGGCCGTTGCTAGGTGG AGAATCATCATTTTTGGCCGACATTGAGCCCTTTTTCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig200:273515..279952-

>mRNA_P-littoralis_Contig200.85.3 ID=mRNA_P-littoralis_Contig200.85.3|Name=mRNA_P-littoralis_Contig200.85.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1086bp|location=Sequence derived from alignment at P-littoralis_Contig200:273515..279952- (Pylaiella littoralis U1_48)
ATGCTTGGTCGTGTGACCAAGTACAGGGTCAACAACGATGCGCCATCCGA
GGTGTTTGAGGCAGACAGCGAGCAAGAACGAAAGGACCGACTGCTTCTCA
GCTACCCCGAGCGGGTCGGTAAGAATCTAGACGTGAAGGCGGTGCAGCCA
GGCAGCGGGGACAAGAACGAGCTAGTTTTCGACCTCGTTGGCATTGATGC
CTCCATCGCGAACGCGCTGCGAAGAATCTTGCTAGCGGAGGTAGCGACGG
TGGCCATCGAACACGTGTACATGTACATGAACTCTTCCATAATCCACGAC
GAGATCCTGGCGCACCGTTTGGGGCTGGTCCCGATCATGGCAAACCCGCG
CATGTTCGAGTTCGTGGGCGAGACGGGGGGCGAACCAGACGACCCGACGG
AGTTCAACACGTGTGTGTTCAAGCTGGAGGTGAAGAACCCGTCCGATCCC
GCGGACATGCCCGATCCGATGCCCAAGGGAACGAGCTATGCCGCAGGGCC
GCGACGCACCATGAACGTCTTCAGCGGTGCCATGGAGTGGTGTCCGCACG
GGGACCAGGAGGAACGCTTCGAGGGGGAAGGGGGGGTGCGGCCGGTGCAT
GACGACATCCTCATCGCCAAGCTACGACCAGGGCAGGAGATTGTGGCGGA
GATGCACTGCCGGAAGGGCATCGGAAAAGACCACGCCAAGTTTTCTCCTG
TGGCCACGGCGAGCTACCGCTTGCTTCCTGTGATTACCCTCGAGGAGGAG
ATAGAGGGGCGAGATGCGGAGGATCTCGTGGCGAAGTGTCCGCTGGACGT
CTTCGACATCGAGGACCTGGGTGGAGGCAGCAAGCGGGCGAAGGTGGCTC
GCCCACGAGATTGCACCATGTGTCGGGAGTGCATTAGGGAGCCAGGGTGG
AGCGAGAAGATCTCTCTTTCACGCATCGCTGACCACTTCATCTTCGGGGT
CGAGTCCGTGGGGATGCTTCCGCCAAAGGAGCTCCTCAAGGACAGCATCC
AAGTATTGCGGCAGAAGTGCGTCTCTATGATAGCGGAGGTGGAGGCATTC
GAGTCAGGGGTCGACTTCGACGAGGCGATGCCATAA
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